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ONTOLOGY REPORT - ANNOTATIONS


Term:head development
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Accession:GO:0060322 term browser browse the term
Definition:The biological process whose specific outcome is the progression of a head from an initial condition to its mature state. The head is the anterior-most division of the body.



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head development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:33996804) RGD PMID:33996804 NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962
JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4941943 (PMID:21344612)
Ensembl
RGD
PMID:21344612 GO_REF:0000107 NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Ccdc32 coiled-coil domain containing 32 involved_in ISO (PMID:32307552) RGD PMID:32307552 NCBI chr 3:105,998,429...106,010,985
Ensembl chr 3:105,998,430...106,010,975
JBrowse link
G Diaph3 diaphanous-related formin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27848932)
Ensembl
RGD
PMID:27848932 GO_REF:0000107 NCBI chr15:62,543,375...63,013,060
Ensembl chr15:62,543,375...63,012,975
JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO MGI:101927 (PMID:15306564) RGD PMID:15306564 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926 (PMID:15306564) RGD PMID:15306564 NCBI chr 4:34,984,264...34,989,926
Ensembl chr 4:34,984,232...34,991,343
JBrowse link
G Ednra endothelin receptor type A acts_upstream_of_or_within ISO MGI:1857473 (PMID:15306564) RGD PMID:15306564 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3796818|PMID:18448090)
UniProt
RGD
PMID:18448090 GO_REF:0000024 MGI:3796818 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:3834146 (PMID:19056373) RGD PMID:19056373 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Il11ra1 interleukin 11 receptor subunit alpha 1 involved_in ISO
IEA
(PMID:21741611)
GO_REF:0000107
RGD
Ensembl
PMID:21741611 GO_REF:0000107 NCBI chr 5:56,931,824...56,941,408
Ensembl chr 5:56,935,516...56,941,408
JBrowse link
G Ldb1 LIM domain binding 1 involved_in ISO UniProtKB:Q9D032 (MGI:3578570|PMID:15857913) RGD PMID:15857913 MGI:3578570 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2443342 (PMID:10529425)
UniProtKB:Q9D032 (MGI:3578570|PMID:15857913)
UniProt
RGD
PMID:10529425 PMID:15857913 GO_REF:0000024 MGI:3578570 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Limk2 LIM domain kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3612836 (PMID:26234751)
Ensembl
RGD
PMID:26234751 GO_REF:0000107 NCBI chr14:78,208,182...78,286,106
Ensembl chr14:78,218,063...78,286,007
JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4887578 (PMID:21045211)
Ensembl
RGD
PMID:21045211 GO_REF:0000107 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:3763359 (PMID:26234751) RGD PMID:26234751 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:4340776 (PMID:25220058) RGD PMID:25220058 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO MGI:1856621|MGI:99783 (PMID:10529425), (PMID:4019727) RGD PMID:4019727 PMID:10529425 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Ssbp3 single stranded DNA binding protein 3 involved_in ISO UniProtKB:P63006|UniProtKB:P70662 (MGI:3578570|PMID:15857913) RGD PMID:15857913 MGI:3578570 NCBI chr 5:121,691,370...121,828,035
Ensembl chr 5:121,691,393...121,827,992
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
JBrowse link
G Tmem67 transmembrane protein 67 IMP RGD PMID:30705305 RGD:14995942 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
JBrowse link
G Tmem67wpk transmembrane protein 67; wpk mutant IMP RGD PMID:30705305 RGD:14995942
G Wdr11 WD repeat domain 11 involved_in ISO (MGI:6116377|PMID:29263200) RGD PMID:29263200 MGI:6116377 NCBI chr 1:184,165,260...184,210,834
Ensembl chr 1:184,165,571...184,210,846
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:3720850 (PMID:21533046)
Ensembl
RGD
PMID:21533046 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:3576789 (PMID:9140068) RGD PMID:9140068 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within TAS
ISO
MGI:3051561 (PMID:15985453) RGD PMID:15985453 PMID:12511850 RGD:1601329 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within ISO MGI:1856425 (PMID:1270792), (PMID:1329576), (PMID:1504465) RGD PMID:1270792 PMID:1329576 PMID:1504465 NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO MGI:2154448 (PMID:8631293) RGD PMID:8631293 NCBI chr12:7,880,663...7,882,947
Ensembl chr12:7,881,460...7,882,753
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3808031 (PMID:18996108)
Ensembl
RGD
PMID:18996108 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Pou1f1 POU class 1 homeobox 1 IMP RGD PMID:16216912 RGD:1601440 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) RGD PMID:18996108 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO MGI:2386303 (PMID:9247269) RGD PMID:9247269 NCBI chr 1:29,709,443...29,750,413
Ensembl chr 1:29,709,443...29,750,413
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within IEP
ISO
MGI:2449045 (PMID:16932809) RGD PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3712359 (PMID:17440044)
Ensembl
RGD
PMID:17440044 GO_REF:0000107 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:3821675|PMID:18778775) RGD PMID:18778775 MGI:3821675 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (MGI:2664023|PMID:12805306) RGD PMID:12805306 MGI:2664023 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:22791648 RGD:8694158 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1339975 (PMID:25242307)
Ensembl
RGD
PMID:25242307 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:12527005) RGD PMID:12527005 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO MGI:97306 (PMID:25242307) RGD PMID:25242307 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO MGI:2179766 (PMID:24441682) RGD PMID:24441682 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (PMID:23499007) RGD PMID:23499007 NCBI chr14:21,884,039...21,947,857
Ensembl chr14:21,884,039...21,947,857
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:4440742 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:5467661|PMID:23206892) RGD PMID:23206892 MGI:5467661 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:4453290|PMID:19961580)
UniProt
RGD
PMID:19961580 GO_REF:0000024 MGI:4453290 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (PMID:11997145) RGD PMID:11997145 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO MGI:3578655 (PMID:15814794) RGD PMID:15814794 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:4867728 (PMID:21055390)
(MGI:5467661|PMID:23206892)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21055390 PMID:23206892 GO_REF:0000024 GO_REF:0000107 MGI:5467661 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
anterior head development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B acts_upstream_of_or_within ISO MGI:3800577 (PMID:26234751) RGD PMID:26234751 NCBI chr 2:25,002,210...25,162,675
Ensembl chr 2:25,002,346...25,162,671
JBrowse link
G Bmp5 bone morphogenetic protein 5 acts_upstream_of_or_within ISO MGI:2679550 (PMID:26234751) RGD PMID:26234751 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4999626|MGI:5551861 (PMID:26234751)
Ensembl
RGD
PMID:26234751 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Ddx10 DEAD-box helicase 10 acts_upstream_of_or_within ISO MGI:5526028 (PMID:26234751) RGD PMID:26234751 NCBI chr 8:53,488,656...53,643,373
Ensembl chr 8:53,488,656...53,643,373
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase acts_upstream_of_or_within ISO MGI:3717451|MGI:5476717|MGI:5514227|MGI:5514246|MGI:5514248|MGI:5691529 (PMID:26234751) RGD PMID:26234751 NCBI chr10:53,690,301...53,711,811
Ensembl chr10:53,691,626...53,708,420
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:5546026 (PMID:26234751) RGD PMID:26234751 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Aatk apoptosis-associated tyrosine kinase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5428170 (PMID:22573681)
GO_Central
RGD
PMID:22573681 GO_REF:0000033 NCBI chr10:105,290,752...105,327,219
Ensembl chr10:105,291,585...105,327,112
JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISO (PMID:22100072) RGD PMID:22100072 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924
JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:88141 (PMID:11684658) RGD PMID:11684658 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISO (PMID:15044805) RGD PMID:15044805 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) RGD PMID:26299366 NCBI chr 2:120,306,417...120,497,707
Ensembl chr 2:120,306,412...120,497,705
JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
JBrowse link
G Agtr1b angiotensin II receptor, type 1b involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 2:102,844,969...102,920,232
Ensembl chr 2:102,844,969...102,920,232
JBrowse link
G Aim2 absent in melanoma 2 involved_in ISO (PMID:32350463) RGD PMID:32350463 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975
JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO MGI:4315923|MGI:5431002 (PMID:18776131), (PMID:21746835) RGD PMID:18776131 PMID:21746835 NCBI chr 6:124,611,789...124,679,978
Ensembl chr 6:124,611,902...124,679,961
JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:5700373 (PMID:17487225) RGD PMID:17487225 NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:108,741,899...108,743,425
Ensembl chr 8:108,693,060...108,744,555
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:34942119) RGD PMID:34942119 NCBI chr12:34,131,214...34,160,819
Ensembl chr12:34,133,429...34,160,005
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO MGI:1928692 (PMID:9753321) RGD PMID:9753321 NCBI chr 7:25,494,143...25,579,540
Ensembl chr 7:25,494,609...25,579,540
JBrowse link
G Aplnr apelin receptor involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
G Apod apolipoprotein D involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
JBrowse link
G Arl6 ADP-ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO MGI:5310744 (PMID:22139371) RGD PMID:22139371 NCBI chr11:40,711,878...40,738,254
Ensembl chr11:40,712,022...40,737,937
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:24022475)
UniProt
RGD
PMID:24022475 GO_REF:0000024 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) RGD PMID:20823249 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:104779 (PMID:16687486) RGD PMID:16687486 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:12223565) RGD PMID:12223565 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Atxn1 ataxin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5888926|PMID:28288114)
UniProt
RGD
PMID:28288114 GO_REF:0000024 MGI:5888926 NCBI chr17:18,737,491...19,142,360
Ensembl chr17:18,737,533...19,142,360
JBrowse link
G Atxn1l ataxin 1 like involved_in ISO (MGI:5888926|PMID:28288114) RGD PMID:28288114 MGI:5888926 NCBI chr19:37,700,341...37,711,529
Ensembl chr19:37,700,106...37,711,538
JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) RGD PMID:31600785 NCBI chr12:5,255,521...5,346,807
Ensembl chr12:5,255,740...5,346,810
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (PMID:19265195) RGD PMID:19265195 NCBI chr 5:131,412,541...131,422,573
Ensembl chr 5:131,412,541...131,421,013
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3703386|PMID:16287848)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16287848 GO_REF:0000024 GO_REF:0000107 MGI:3703386 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO MGI:98715 (PMID:22228099) RGD PMID:22228099 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:107771 (PMID:11684658) RGD PMID:11684658 NCBI chr20:13,469,325...13,596,942
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISO
ISS
(MGI:5544381|PMID:24074871), (PMID:24074871)
GO_REF:0000024
RGD
UniProt
PMID:24074871 GO_REF:0000024 MGI:5544381 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:1857632 (PMID:7926765) RGD PMID:7926765 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) RGD PMID:14609955 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2156556|MGI:2176173 (PMID:17476307)
Ensembl
RGD
PMID:17476307 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5770105|PMID:27042284)
Ensembl
RGD
PMID:27042284 GO_REF:0000107 MGI:5770105 NCBI chr 5:82,348,501...82,550,506
Ensembl chr 5:82,348,930...82,493,150
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520
JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in ISO (MGI:6739960|PMID:34298015) RGD PMID:34298015 MGI:6739960 NCBI chr 3:61,948,614...62,109,968
Ensembl chr 3:61,948,646...62,110,079
JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO MGI:4364215|MGI:5056368 (PMID:29317443) RGD PMID:29317443 NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Cdh2 cadherin 2 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(MGI:1347398|PMID:10545161)
UniProt
GO_Central
RGD
PMID:10545161 GO_REF:0000024 GO_REF:0000033 MGI:1347398 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4454588|PMID:20460369)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20460369 GO_REF:0000024 GO_REF:0000107 MGI:4454588 NCBI chr 5:83,792,282...83,961,129
Ensembl chr 5:83,792,284...83,960,782
JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within ISO MGI:2653507 (PMID:15248193) RGD PMID:15248193 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) RGD PMID:31004071 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:24998929)
MGI:3530648 (PMID:27602517)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:24998929 PMID:27602517 GO_REF:0000033 GO_REF:0000107 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Chl1 cell adhesion molecule L1-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
JBrowse link
G Cic capicua transcriptional repressor involved_in ISO (MGI:5888926|PMID:28288114) RGD PMID:28288114 MGI:5888926 NCBI chr 1:80,853,920...80,880,537
Ensembl chr 1:80,853,920...80,880,532
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in ISO (MGI:3693257|PMID:17047318) RGD PMID:17047318 MGI:3693257 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162
JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:10992246) RGD PMID:10992246 NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438
JBrowse link
G Cntn1 contactin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541
JBrowse link
G Cntn2 contactin 2 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
JBrowse link
G Cntn3 contactin 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:134,841,268...135,214,460
Ensembl chr 4:134,842,266...135,125,613
JBrowse link
G Cntn4 contactin 4 involved_in IEP
IEA
PMID:8586965
GO_REF:0000118
TreeGrafter PMID:8586965 GO_REF:0000118, RGD:631992 NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090
JBrowse link
G Cntn5 contactin 5 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:6,735,715...7,967,727
Ensembl chr 8:6,738,239...7,967,957
JBrowse link
G Cntn6 contactin 6 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:137,354,886...137,751,712
Ensembl chr 4:137,355,367...137,751,119
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:16107487) RGD PMID:16107487 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in ISO (PMID:17471495) RGD PMID:17471495 NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120
JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) RGD PMID:33459505 NCBI chr14:34,754,279...34,800,530
Ensembl chr14:34,754,289...34,800,814
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5287328|PMID:21778362)
UniProt
RGD
PMID:21778362 GO_REF:0000024 MGI:5287328 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) RGD PMID:12183377 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1934407 (PMID:12183377)
GO_Central
RGD
PMID:12183377 GO_REF:0000033 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within ISO MGI:1277171 (PMID:16387638) RGD PMID:16387638 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO MGI:1330861 (PMID:16387638) RGD PMID:16387638 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in IMP PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr20:27,891,989...27,894,088
Ensembl chr20:27,891,998...27,894,105
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:31256877) RGD PMID:31256877 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802
JBrowse link
G Diaph1 diaphanous-related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) RGD PMID:24781755 MGI:5707577 NCBI chr18:29,669,659...29,769,070
Ensembl chr18:29,669,659...29,769,172
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (MGI:3054504|PMID:15314164) RGD PMID:15314164 MGI:3054504 NCBI chr 5:129,394,221...129,403,040
Ensembl chr 5:129,394,221...129,403,040
JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within ISO MGI:4432280 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) RGD PMID:30318146 MGI:6245118 NCBI chr12:21,628,319...21,629,398
Ensembl chr12:21,626,450...21,629,408
JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 involved_in ISO (PMID:12051741) RGD PMID:12051741 NCBI chr 8:45,740,298...46,057,322
Ensembl chr 8:45,740,298...46,057,320
JBrowse link
G Eml1 EMAP like 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5574528|PMID:24859200)
(PMID:24859200)
UniProt
Ensembl
RGD
PMID:24859200 GO_REF:0000024 GO_REF:0000107 MGI:5574528 NCBI chr 6:127,283,968...127,457,246
Ensembl chr 6:127,284,029...127,457,246
JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1857433|MGI:2136349 (PMID:12091317), (PMID:12561075)
GO_Central
RGD
PMID:12091317 PMID:12561075 GO_REF:0000033 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2136350|MGI:2148858 (PMID:12091317), (PMID:12196586), (PMID:12209834), (PMID:12561075)
GO_Central
RGD
PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000033 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:17353897) RGD PMID:17353897 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Epha7 Eph receptor A7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:3582020|PMID:15902206)
UniProt
Ensembl
RGD
PMID:15902206 GO_REF:0000024 GO_REF:0000107 MGI:3582020 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
JBrowse link
G Epor erythropoietin receptor acts_upstream_of_or_within ISO MGI:1857575 (PMID:11807041) RGD PMID:11807041 NCBI chr 8:20,489,678...20,494,257
Ensembl chr 8:20,489,678...20,494,257
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:2152217 (PMID:12515851) RGD PMID:12515851 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (PMID:14605369)
MGI:2176173|MGI:2682061 (PMID:14605369)
RGD PMID:14605369 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2448986 (PMID:12682014) RGD PMID:12682014 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518|MGI:4835411 (PMID:20675713), (PMID:23591631), (PMID:26306834) RGD PMID:20675713 PMID:23591631 PMID:26306834 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) RGD PMID:32369453 NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705|MGI:1857869 (PMID:4784576), (PMID:5500588), (PMID:9635428) RGD PMID:4784576 PMID:5500588 PMID:9635428 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxj1 forkhead box J1 involved_in ISO
IEA
(MGI:86662|PMID:9096351)
GO_REF:0000107
RGD
Ensembl
PMID:9096351 GO_REF:0000107 MGI:86662 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
JBrowse link
G Foxr1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) RGD PMID:34723967 MGI:6792271 NCBI chr 8:44,760,587...44,768,696
Ensembl chr 8:44,760,948...44,768,880
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (PMID:16168624) RGD PMID:16168624 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO MGI:3870680|MGI:5803867 (PMID:27472056) RGD PMID:27472056 NCBI chr19:51,552,770...51,572,323
Ensembl chr19:51,552,816...51,572,305
JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA
IBA
ISO
GO_REF:0000002
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(MGI:6478058|PMID:25792865)
InterPro
GO_Central
TreeGrafter
Ensembl
RGD
PMID:25792865 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:6478058 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373
JBrowse link
G Git2 GIT ArfGAP 2 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000118
GO_REF:0000033
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr12:41,829,717...41,872,621
Ensembl chr12:41,829,730...41,871,097
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:1856282 (PMID:12435361), (PMID:17395647), (PMID:8026071) RGD PMID:8026071 PMID:12435361 PMID:17395647 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in IEA
ISO
GO_REF:0000107
(PMID:28851741)
Ensembl
RGD
PMID:28851741 GO_REF:0000107 NCBI chr17:83,777,625...84,244,428
Ensembl chr17:83,834,569...84,244,428
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4942413 (PMID:21377456)
GO_Central
RGD
PMID:21377456 GO_REF:0000033 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:108067 (PMID:12930780) RGD PMID:12930780 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:6102914 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:3703278|PMID:17331197)
UniProt
RGD
PMID:17331197 GO_REF:0000024 MGI:3703278 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (PMID:11291863) RGD PMID:11291863 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957
JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO MGI:107160 (PMID:15363417) RGD PMID:15363417 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771
JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO MGI:107159 (PMID:15363417) RGD PMID:15363417 NCBI chr 1:186,313,237...186,315,201
Ensembl chr 1:186,313,063...186,315,201
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) RGD PMID:18669642 MGI:3811685 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (PMID:10579729) RGD PMID:10579729 NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2675580 (PMID:16978870) RGD PMID:16978870 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein acts_upstream_of_or_within ISO MGI:1856913|MGI:3801608 (PMID:26234751) RGD PMID:26234751 MGI:71926 NCBI chr19:38,236,996...38,583,271
Ensembl chr19:38,236,464...38,583,264
JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3505549 (PMID:15469968) RGD PMID:15469968 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:70,474,978...70,486,062 JBrowse link
G Ier3ip1-ps1 immediate early response 3 interacting protein 1, pseudogene 1 involved_in ISO (PMID:33122427) RGD PMID:33122427 NCBI chr 4:132,342,131...132,342,625
Ensembl chr 4:132,332,180...132,342,316
JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3829198 (PMID:18930042)
Ensembl
RGD
PMID:18930042 GO_REF:0000107 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1918742|MGI:3823090 (PMID:19036983), (PMID:22228099) RGD PMID:19036983 PMID:22228099 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Igdcc4 immunoglobulin superfamily, DCC subclass, member 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:65,621,893...65,657,651
Ensembl chr 8:65,621,897...65,657,648
JBrowse link
G Igf1r insulin-like growth factor 1 receptor acts_upstream_of_or_within ISO MGI:1926486 (PMID:12904469) RGD PMID:12904469 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO MGI:3765965 (PMID:21824519) RGD PMID:21824519 NCBI chr 6:58,070,035...58,970,165
Ensembl chr 6:58,070,283...58,969,840
JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within ISO MGI:2158686 (PMID:12904469) RGD PMID:12904469 NCBI chr16:78,488,249...78,512,482
Ensembl chr16:78,485,045...78,512,482
JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5437647 (PMID:23906841)
GO_Central
RGD
PMID:23906841 GO_REF:0000033 NCBI chr 8:41,276,501...41,333,383
Ensembl chr 8:41,276,491...41,333,514
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (MGI:5297001|PMID:21966978) RGD PMID:21966978 MGI:5297001 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) RGD PMID:30382937 NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071
JBrowse link
G Kdm4b lysine demethylase 4B involved_in ISO (MGI:6101669|PMID:27023172) RGD PMID:27023172 MGI:6101669 NCBI chr 9:1,158,737...1,237,233
Ensembl chr 9:1,158,752...1,236,543
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO MGI:4364527 (PMID:29078390) RGD PMID:29078390 NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127
JBrowse link
G L1cam L1 cell adhesion molecule involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965 (PMID:26306834), (PMID:29360985) RGD PMID:26306834 PMID:29360985 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO MGI:1890208 (PMID:14566948), (PMID:15295034) RGD PMID:14566948 PMID:15295034 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Lmtk3 lemur tyrosine kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,261,058...96,280,362
Ensembl chr 1:96,260,977...96,280,672
JBrowse link
G Maco1 macoilin 1 involved_in ISO (MGI:3052424|PMID:15255972) RGD PMID:15255972 MGI:3052424 NCBI chr 5:147,012,416...147,075,265
Ensembl chr 5:147,012,867...147,075,001
JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in ISO (MGI:4887328|PMID:17586838) RGD PMID:17586838 MGI:4887328 NCBI chr 3:127,720,066...129,737,511
Ensembl chr 3:127,720,181...129,734,492
JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in ISO (PMID:19734898) RGD PMID:19734898 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
G Map1s microtubule-associated protein 1S involved_in IEA
ISO
GO_REF:0000107
(MGI:3529608|PMID:15528209)
Ensembl
RGD
PMID:15528209 GO_REF:0000107 MGI:3529608 NCBI chr16:18,516,759...18,527,777
Ensembl chr16:18,517,574...18,527,988
JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in ISO
IEA
(PMID:30449657)
GO_REF:0000107
(MGI:6269299|PMID:30449657)
RGD
Ensembl
PMID:30449657 GO_REF:0000107 MGI:6269299 NCBI chr19:23,216,418...23,244,224
Ensembl chr19:23,207,991...23,244,235
JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:7285999|PMID:35482892)
UniProt
Ensembl
RGD
PMID:35482892 GO_REF:0000024 GO_REF:0000107 MGI:7285999 NCBI chr19:33,158,053...33,166,784
Ensembl chr19:33,158,056...33,166,445
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEP PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2158354 (PMID:18571096) RGD PMID:18571096 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:1861125 (PMID:10882104) RGD PMID:10882104 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265
JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:102,742,904...102,944,833
Ensembl chr 3:102,742,900...102,949,696
JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:76,861,267...76,872,691
Ensembl chr 1:76,861,924...76,872,691
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2450967 (PMID:12397180) RGD PMID:12397180 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (PMID:26005865), (PMID:26005868)
(MGI:6196220|PMID:30074985)
RGD PMID:26005865 PMID:26005868 PMID:30074985 MGI:6196220 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690
JBrowse link
G Mink1 misshapen-like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) RGD PMID:10708748 MGI:1354211 NCBI chr10:55,278,293...55,330,782
Ensembl chr10:55,278,391...55,330,782
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:3664764|MGI:3664765 (PMID:16481398) RGD PMID:16481398 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Napa NSF attachment protein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856610 (PMID:11706940)
Ensembl
RGD
PMID:11706940 GO_REF:0000107 NCBI chr 1:76,787,036...76,805,869
Ensembl chr 1:76,786,932...76,805,869
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO MGI:2450859 (PMID:12556486) RGD PMID:12556486 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:14765537)
MGI:3793713 (PMID:28916769)
GO_REF:0000107
RGD
Ensembl
PMID:14765537 PMID:28916769 GO_REF:0000107 NCBI chr 2:45,951,327...46,061,829
Ensembl chr 2:45,951,313...46,061,846
JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO MGI:5447397 (PMID:30932003) RGD PMID:30932003 NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730
JBrowse link
G Neo1 neogenin 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
JBrowse link
G Nes nestin involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857478 (PMID:10419687)
HGNC-UCL
RGD
PMID:10419687 GO_REF:0000024 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO (PMID:23863479) RGD PMID:23863479 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
JBrowse link
G Nfasc neurofascin involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880
JBrowse link
G Nfib nuclear factor I/B involved_in ISO (PMID:30388402) RGD PMID:30388402 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3714028|MGI:3802571 (PMID:17353270), (PMID:18477394), (PMID:23964093) RGD PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IBA
(PMID:8291537)
GO_REF:0000033
RGD
GO_Central
PMID:8291537 GO_REF:0000033 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11971878)
MGI:1857494|MGI:95843 (PMID:12930780), (PMID:8557195)
RGD PMID:8557195 PMID:11971878 PMID:12930780 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO MGI:4151115 (PMID:21746835) RGD PMID:21746835 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765
JBrowse link
G Nnat neuronatin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:146,225,941...146,228,868
Ensembl chr 3:146,226,407...146,228,834
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (PMID:12397106) RGD PMID:12397106 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Noto notochord homeobox involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (PMID:14994267) RGD PMID:14994267 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO MGI:1861706 (PMID:10195193) RGD PMID:10195193 NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
JBrowse link
G Obox2 oocyte specific homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,191,238...68,199,383
Ensembl chr 1:68,197,886...68,199,095
JBrowse link
G Obox2l2 oocyte specific homeobox 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,216,812...68,219,145
Ensembl chr 1:68,217,649...68,219,076
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO MGI:5548687 (PMID:31383820) RGD PMID:31383820 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of
acts_upstream_of_or_within
ISO MGI:6110171 (PMID:27486780) RGD PMID:27486780 NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155 (PMID:10409504), (PMID:12196586) RGD PMID:10409504 PMID:12196586 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pbx1 PBX homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
JBrowse link
G Pbx2 PBX homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,151,500...4,156,425
Ensembl chr20:4,151,500...4,156,425
JBrowse link
G Pbx3 PBX homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:17,488,691...17,682,412
Ensembl chr 3:17,488,693...17,682,791
JBrowse link
G Pbx4 PBX homeobox 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,555,089...19,590,054
Ensembl chr16:19,555,090...19,590,014
JBrowse link
G Pcdh18 protocadherin 18 involved_in ISO (MGI:2154581|PMID:11716507) RGD PMID:11716507 MGI:2154581 NCBI chr 2:133,831,996...133,845,992
Ensembl chr 2:133,832,001...133,845,883
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:3712712|PMID:17554007) RGD PMID:17554007 MGI:3712712 NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within ISO MGI:5052171 (PMID:26306834) RGD PMID:26306834 NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149
JBrowse link
G Pomk protein-O-mannose kinase acts_upstream_of_or_within ISO MGI:4247868 (PMID:21746835) RGD PMID:21746835 NCBI chr16:66,085,569...66,101,360
Ensembl chr16:66,088,000...66,098,388
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISS
ISO
PMID:8895569
(PMID:7637805)
RGD PMID:7637805 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:107202 (PMID:16687486) RGD PMID:16687486 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) RGD PMID:8812486 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930934 (PMID:9153393) RGD PMID:9153393 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Ptch1 patched 1 involved_in ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO (PMID:11704759) RGD PMID:11704759 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Pygo2 pygopus family PHD finger 2 acts_upstream_of_or_within ISO MGI:3712856 (PMID:17425782) RGD PMID:17425782 NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO
IEA
(PMID:24656866)
GO_REF:0000107
RGD
Ensembl
PMID:24656866 GO_REF:0000107 NCBI chr 8:109,207,705...109,215,738
Ensembl chr 8:109,207,705...109,215,739
JBrowse link
G Rab18 RAB18, member RAS oncogene family involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr17:54,944,099...54,976,093
Ensembl chr17:54,943,955...54,976,043
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) RGD PMID:20512159 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within ISO MGI:2152531 (PMID:15789424) RGD PMID:15789424 NCBI chr18:59,463,347...59,467,469
Ensembl chr18:59,463,737...59,467,431
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1856398 (PMID:12223565)
UniProt
RGD
PMID:12223565 GO_REF:0000024 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) RGD PMID:10197527 NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in ISO (PMID:25565929) RGD PMID:25565929 NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904), (PMID:17558409) RGD PMID:17553904 PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Rtn1 reticulon 1 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:90,763,212...90,983,436
Ensembl chr 6:90,763,216...90,983,436
JBrowse link
G Rtn3 reticulon 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:204,612,675...204,669,212
Ensembl chr 1:204,612,675...204,669,275
JBrowse link
G Rtn4 reticulon 4 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within ISO MGI:2158346 (PMID:16314531) RGD PMID:16314531 NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
JBrowse link
G Sct secretin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in ISO (MGI:5694521|PMID:26203146) RGD PMID:26203146 MGI:5694521 NCBI chr 7:24,064,404...24,117,338
Ensembl chr 7:24,064,404...24,117,305
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:98,824,916...99,102,590
Ensembl chr10:98,828,348...99,101,759
JBrowse link
G Selenop selenoprotein P involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2656912 (PMID:14704310)
Ensembl
RGD
PMID:14704310 GO_REF:0000107 NCBI chr 2:52,498,123...52,508,409
Ensembl chr 2:52,498,339...52,508,852
JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within ISO MGI:3574373 (PMID:16314519) RGD PMID:16314519 NCBI chr10:72,366,729...72,390,764
Ensembl chr10:72,366,873...72,390,768
JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in ISO (PMID:31197650)
(MGI:6467717|PMID:31197650)
RGD PMID:31197650 MGI:6467717 NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090
JBrowse link
G Shroom4 shroom family member 4 involved_in ISO (PMID:16249884) RGD PMID:16249884 NCBI chr  X:15,869,065...16,076,850
Ensembl chr  X:15,869,065...16,076,869
JBrowse link
G Six3 SIX homeobox 3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2450901 (PMID:12569128)
GO_Central
RGD
PMID:12569128 GO_REF:0000033 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:28886095) RGD PMID:28886095 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:2178849|PMID:11984597)
UniProt
Ensembl
RGD
PMID:11984597 GO_REF:0000024 GO_REF:0000107 MGI:2178849 NCBI chr18:27,214,940...27,230,564
Ensembl chr18:27,216,281...27,230,697
JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in ISS
ISO
GO_REF:0000024
(MGI:5634854|PMID:25704603)
UniProt
RGD
PMID:25704603 GO_REF:0000024 MGI:5634854 NCBI chr 2:195,107,434...195,155,697
Ensembl chr 2:195,107,438...195,155,697
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:17035536) RGD PMID:17035536 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14609955)
MGI:5427348 (PMID:22516202)
RGD PMID:14609955 PMID:22516202 NCBI chr  X:126,980,201...127,066,385
Ensembl chr  X:126,994,947...127,066,347
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5775676|PMID:27018474)
UniProt
Ensembl
RGD
PMID:27018474 GO_REF:0000024 GO_REF:0000107 MGI:5775676 NCBI chr 1:79,988,540...80,011,262
Ensembl chr 1:79,988,612...80,011,254
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox12 SRY-box transcription factor 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:140,859,499...140,860,518
Ensembl chr 3:140,856,579...140,860,975
JBrowse link
G Sox14 SRY-box transcription factor 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918
JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:32442410)
UniProt
Ensembl
RGD
PMID:32442410 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within ISO MGI:1861380 (PMID:16314531) RGD PMID:16314531 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within ISO MGI:1316649 (PMID:16314531) RGD PMID:16314531 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391
JBrowse link
G Sry2 sex-determining region Y protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:584,765...585,235 JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within ISO MGI:5429196 (PMID:21746835) RGD PMID:21746835 NCBI chr 9:76,176,922...76,204,423
Ensembl chr 9:76,176,920...76,204,422
JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within ISO MGI:3528591 (PMID:15690082) RGD PMID:15690082 NCBI chr 2:196,442,738...196,485,733
Ensembl chr 2:196,442,634...196,485,671
JBrowse link
G Svbp small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) RGD PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chr 5:132,808,021...132,813,735
Ensembl chr 5:132,808,204...132,813,735
JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO (PMID:28823706), (PMID:28823707) RGD PMID:28823706 PMID:28823707 NCBI chr11:43,303,355...43,361,507
Ensembl chr11:43,303,355...43,361,503
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA
(MGI:2678274|PMID:12975342)
GO_REF:0000107
RGD
Ensembl
PMID:12975342 GO_REF:0000107 MGI:2678274 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
G Tmx2 thioredoxin-related transmembrane protein 2 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:31735293)
UniProt
GO_Central
TreeGrafter
RGD
PMID:31735293 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:69,754,937...69,762,587
Ensembl chr 3:69,754,939...69,762,587
JBrowse link
G Tubgcp2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) RGD PMID:31630790 NCBI chr 1:194,791,113...194,817,807
Ensembl chr 1:194,792,142...194,817,619
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:11406614), (PMID:19286674) RGD PMID:11406614 PMID:19286674 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149
JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29868776)
UniProt
RGD
PMID:29868776 GO_REF:0000024 NCBI chr13:83,709,329...83,719,762
Ensembl chr13:83,709,330...83,716,076
JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29868776)
UniProt
RGD
PMID:29868776 GO_REF:0000024 NCBI chr 2:137,969,476...137,977,620
Ensembl chr 2:137,966,678...137,978,089
Ensembl chr 2:137,966,678...137,978,089
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in ISO (PMID:31820119) RGD PMID:31820119 NCBI chr14:95,456,330...95,497,483
Ensembl chr14:95,456,330...95,496,830
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:27445138) RGD PMID:27445138 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
JBrowse link
G Unc5c unc-5 netrin receptor C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857013|MGI:1857852 (PMID:10818148), (PMID:1401878), (PMID:9126743), (PMID:9550145)
Ensembl
RGD
PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 GO_REF:0000107 NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) RGD PMID:23821644 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236
JBrowse link
G Utp3 UTP3, small subunit processome component involved_in ISS
ISO
GO_REF:0000024
(MGI:2136064|PMID:11404095)
UniProt
RGD
PMID:11404095 GO_REF:0000024 MGI:2136064 NCBI chr14:19,515,716...19,517,370
Ensembl chr14:19,515,669...19,517,396
JBrowse link
G Vax1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1859863|MGI:1859922 (PMID:10601035), (PMID:10601036)
GO_Central
RGD
PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:116,195,528...116,219,597
Ensembl chr 4:116,195,528...116,219,594
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
G Zfp335 zinc finger protein 335 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(MGI:5468205|PMID:23178126)
(PMID:23178126)
UniProt
GO_Central
TreeGrafter
RGD
PMID:23178126 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5468205 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
JBrowse link
G Zic1 Zic family member 1 involved_in ISO (PMID:8542595)
(MGI:78770|PMID:7931345)
RGD PMID:7931345 PMID:8542595 MGI:78770 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574346 (PMID:15713641)
Ensembl
RGD
PMID:15713641 GO_REF:0000107 NCBI chr13:88,943,708...89,225,831
Ensembl chr13:88,946,091...89,225,708
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95387 (PMID:25100583)
Ensembl
RGD
PMID:25100583 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) RGD PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr 4:109,294,249...110,443,409
Ensembl chr 4:109,293,978...110,443,522
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:2682313|MGI:88355 (PMID:23178126), (PMID:25100583) RGD PMID:23178126 PMID:25100583 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1890081 (PMID:24483844)
Ensembl
RGD
PMID:24483844 GO_REF:0000107 NCBI chr17:1,680,660...1,822,610
Ensembl chr17:1,681,324...1,829,376
JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1890081 (PMID:24483844)
Ensembl
RGD
PMID:24483844 GO_REF:0000107 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:17,232,735...17,330,574
Ensembl chr10:17,227,181...17,330,571
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO MGI:2448480|MGI:95480 (PMID:24483844) RGD PMID:24483844 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) RGD PMID:17954912 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Mir124-1 microRNA 124-1 acts_upstream_of_or_within ISO MGI:5307015|MGI:5307017 (PMID:21857657) RGD PMID:21857657 NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:30503862) RGD PMID:30503862 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO
IBA
(PMID:9063735)
GO_REF:0000033
RGD
GO_Central
PMID:9063735 GO_REF:0000033 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (PMID:17614943) RGD PMID:17614943 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:17614943) RGD PMID:17614943 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) RGD PMID:19208814 MGI:3832995 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4948759|PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 MGI:4948759 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3774019 (PMID:18165320)
Ensembl
RGD
PMID:18165320 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in ISO (MGI:3832995|PMID:19208814) RGD PMID:19208814 MGI:3832995 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO MGI:5295267 (PMID:21715716) RGD PMID:21715716 NCBI chr 2:58,512,489...58,694,718
Ensembl chr 2:58,512,489...58,694,664
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO (PMID:30624672), (PMID:31207318) RGD PMID:30624672 PMID:31207318 NCBI chr 1:203,360,434...203,370,422
Ensembl chr 1:203,360,440...203,370,430
JBrowse link
G Zfp335 zinc finger protein 335 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5470136|MGI:95387 (PMID:23178126)
Ensembl
RGD
PMID:23178126 GO_REF:0000107 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:7903221) RGD PMID:7903221 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857626 (PMID:9367425)
Ensembl
RGD
PMID:9367425 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (PMID:7925021) RGD PMID:7925021 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:104876 (PMID:18579678)
Ensembl
RGD
PMID:18579678 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) RGD PMID:18579678 NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:2149116 (PMID:15548218) RGD PMID:15548218 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO
IEA
(PMID:11872605)
GO_REF:0000107
RGD
Ensembl
PMID:11872605 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347476|MGI:2176222|MGI:2177337 (PMID:17922007) RGD PMID:17922007 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:1857743 (PMID:10357893) RGD PMID:10357893 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Nog noggin involved_in ISO
IEA
(PMID:8582276)
GO_REF:0000107
RGD
Ensembl
PMID:8582276 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1926861 (PMID:17922007) RGD PMID:17922007 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:4887555|PMID:19046377) RGD PMID:19046377 MGI:4887555 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within ISO UniProtKB:Q02576 (MGI:3723363|PMID:17573818) RGD PMID:17573818 MGI:3723363 NCBI chr 2:189,444,287...189,449,625
Ensembl chr 2:189,442,711...189,449,625
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3512302 (PMID:8955272)
Ensembl
RGD
PMID:8955272 GO_REF:0000107 NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) RGD PMID:25099998 NCBI chr10:1,779,834...1,946,586
Ensembl chr10:1,779,835...1,946,575
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5463669|PMID:23056358)
UniProt
Ensembl
RGD
PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10970885) RGD PMID:10970885 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2429693 (PMID:15677725)
Ensembl
RGD
PMID:15677725 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (PMID:10729342) RGD PMID:10729342 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO MGI:3665437 (PMID:18001149) RGD PMID:18001149 NCBI chr20:37,123,193...37,126,725
Ensembl chr20:37,123,193...37,126,880
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:2386412 (PMID:18957199) RGD PMID:18957199 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (PMID:10325223) RGD PMID:10325223 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO MGI:3765904 (PMID:17928865) RGD PMID:17928865 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
JBrowse link
G Nfib nuclear factor I/B involved_in ISO MGI:5052268 (PMID:27965439) RGD PMID:27965439 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802570 (PMID:27965439) RGD PMID:27965439 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Ngf nerve growth factor IMP RGD PMID:29409115 RGD:402463967 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 IEP RGD PMID:12834878 RGD:5133694 NCBI chr 1:156,823,960...156,848,262
Ensembl chr 1:156,823,960...156,848,261
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) RGD PMID:18694563 MGI:3813369 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2667422|PMID:12843296) RGD PMID:12843296 MGI:2667422 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:12843296) RGD PMID:12843296 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) RGD PMID:12843296 MGI:2667422 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2684610 (PMID:17644613) RGD PMID:17644613 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 IMP RGD PMID:18635264 RGD:5129699 NCBI chr 1:76,948,622...76,959,826 JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (PMID:19842188) RGD PMID:19842188 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (PMID:19842188) RGD PMID:19842188 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776
JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:2679774|PMID:14557550), (MGI:3045659|PMID:15121182) RGD PMID:14557550 PMID:15121182 MGI:2679774 MGI:3045659 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:20018874)
(MGI:4461115|PMID:20018874)
RGD PMID:20018874 MGI:4461115 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) RGD PMID:14557550 MGI:2679774 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856801 (PMID:15091337)
Ensembl
RGD
PMID:15091337 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:19682991 RGD:6903898 NCBI chr  X:112,119,876...112,124,060
Ensembl chr  X:112,120,228...112,124,057
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:8855328) RGD PMID:8855328 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO
ISS
(PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
GO_REF:0000024
RGD
UniProt
PMID:24766809 PMID:24766810 GO_REF:0000024 MGI:5568133 NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
JBrowse link
G Dixdc1 DIX domain containing 1 IMP RGD PMID:19339625 RGD:2308917 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:2661097 (PMID:20798045) RGD PMID:20798045 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) RGD PMID:21419114 MGI:5050602 NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:3621523|PMID:16504944)
UniProt
Ensembl
RGD
PMID:16504944 GO_REF:0000024 GO_REF:0000107 MGI:3621523 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA
(MGI:3662936|PMID:16901643)
GO_REF:0000107
RGD
Ensembl
PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861809 (PMID:10407039)
Ensembl
RGD
PMID:10407039 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99511 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346866|MGI:4868451 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO MGI:2178542 (PMID:28556830) RGD PMID:28556830 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642
JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (PMID:16571625) RGD PMID:16571625 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2446434|MGI:3664541|MGI:95727 (PMID:16571625) RGD PMID:16571625 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:30503862) RGD PMID:30503862 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176173|MGI:2176256 (PMID:16571625)
Ensembl
RGD
PMID:16571625 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Trnp1 TMF1-regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) RGD PMID:23622239 MGI:5490679 NCBI chr 5:145,706,427...145,713,279
Ensembl chr 5:145,706,094...145,713,272
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:17218254) RGD PMID:17218254 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (PMID:23861879) RGD PMID:23861879 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295128|PMID:21957071)
UniProt
RGD
PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Mdk midkine involved_in ISO
IEA
(MGI:2178952|PMID:10096022)
GO_REF:0000107
RGD
Ensembl
PMID:10096022 GO_REF:0000107 MGI:2178952 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4831137 (PMID:20153830)
GO_Central
RGD
PMID:20153830 GO_REF:0000033 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387774 (PMID:17409116)
Ensembl
RGD
PMID:17409116 GO_REF:0000107 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625 (MGI:4839424|PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) RGD PMID:17984326 NCBI chr 1:194,689,962...194,738,353
Ensembl chr 1:194,690,135...194,738,362
JBrowse link
G Mtpn myotrophin IEP RGD PMID:8144589 RGD:632797 NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724
JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within
ISO MGI:3802571 (PMID:23042739)
MGI:3802571 (PMID:21800304)
RGD PMID:21800304 PMID:23042739 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625|UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) RGD PMID:27160703 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) RGD PMID:10624947 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) RGD PMID:9405095 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5689090|PMID:22095825)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22095825 GO_REF:0000024 GO_REF:0000107 MGI:5689090 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Egf epidermal growth factor acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:218,219,408...218,302,359
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Psmg1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO MGI:4820730 (PMID:20498273) RGD PMID:20498273 NCBI chr11:35,276,080...35,285,541
Ensembl chr11:35,276,011...35,285,622
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO UniProtKB:Q62226 (MGI:2683830|PMID:14687547) RGD PMID:14687547 MGI:2683830 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of
ISS
ISO
IEA
GO_REF:0000024
(PMID:10027293)
UniProtKB:P51448 (MGI:2683830|PMID:14687547), (MGI:5689090|PMID:22095825)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10027293 PMID:14687547 PMID:22095825 GO_REF:0000024 GO_REF:0000107 MGI:2683830 MGI:5689090 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Zfp423 zinc finger protein 423 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27727273)
Ensembl
RGD
PMID:27727273 GO_REF:0000107 NCBI chr19:19,111,213...19,407,373
Ensembl chr19:19,110,238...19,407,373
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO MGI:3793763|MGI:3793765 (PMID:18327254) RGD PMID:18327254 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:7697385) RGD PMID:7697385 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5559035|PMID:23912123)
UniProt
Ensembl
RGD
PMID:23912123 GO_REF:0000024 GO_REF:0000107 MGI:5559035 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (PMID:19074029) RGD PMID:19074029 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (PMID:19074029) RGD PMID:19074029 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G L1cam L1 cell adhesion molecule IMP RGD PMID:27027721 RGD:401959323 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) RGD PMID:26609159 NCBI chr 1:259,897,663...259,901,561
Ensembl chr 1:259,897,939...259,898,730
JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) RGD PMID:26609159 NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:2159417|PMID:11884758), (MGI:3614720|PMID:16465590), (MGI:4849873|PMID:21074048)
MGI:1856535|MGI:1857523|MGI:2443047|MGI:6270378 (PMID:10630211), (PMID:30420556)
RGD PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 MGI:2159417 MGI:3614720 MGI:4849873 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856466 (PMID:2473662) RGD PMID:2473662 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO MGI:3505741 (PMID:10973246) RGD PMID:10973246 NCBI chr12:34,754,132...34,851,175
Ensembl chr12:34,754,137...34,851,479
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:10630211), (PMID:1306163), (PMID:7834360) RGD PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4831137 (PMID:20153830)
GO_Central
RGD
PMID:20153830 GO_REF:0000033 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295128|PMID:21957071)
UniProt
RGD
PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO MGI:3778383 (PMID:22133810) RGD PMID:22133810 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (PMID:20041218) RGD PMID:20041218 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (PMID:17664423) RGD PMID:17664423 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:107792 (PMID:17664423)
UniProt
RGD
PMID:17664423 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (PMID:17664423) RGD PMID:17664423 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:3521746 (PMID:15345707) RGD PMID:15345707 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rora RAR-related orphan receptor A acts_upstream_of_or_within ISO MGI:1857035 (PMID:8996814) RGD PMID:8996814 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (PMID:21937600), (PMID:24491816) RGD PMID:21937600 PMID:24491816 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (PMID:28934388) RGD PMID:28934388 NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2137515|MGI:2152544|MGI:2179048|MGI:5587034 (PMID:29615573) RGD PMID:29615573 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO MGI:1918244 (PMID:30420556) RGD PMID:30420556 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761
JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within ISO MGI:3618596 (PMID:16906134) RGD PMID:16906134 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO (PMID:21052544) RGD PMID:21052544 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (PMID:16625205), (PMID:20577052) RGD PMID:16625205 PMID:20577052 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (PMID:19265195) RGD PMID:19265195 NCBI chr 5:131,412,541...131,422,573
Ensembl chr 5:131,412,541...131,421,013
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:1306163) RGD PMID:1306163 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295128|PMID:21957071)
UniProt
RGD
PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO
IEA
(MGI:4437543|PMID:19816510)
GO_REF:0000107
RGD
Ensembl
PMID:19816510 GO_REF:0000107 MGI:4437543 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Klhl1 kelch-like family member 1 acts_upstream_of_or_within ISO MGI:3664534|MGI:3664543 (PMID:17005861) RGD PMID:17005861 NCBI chr15:72,698,191...73,142,726
Ensembl chr15:72,699,094...73,142,594
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:3664765 (PMID:16481398) RGD PMID:16481398 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (PMID:17712420) RGD PMID:17712420 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:21800304) RGD PMID:21800304 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Sez6 seizure related 6 homolog acts_upstream_of_or_within ISO MGI:1935121|MGI:2385295 (PMID:16814779) RGD PMID:16814779 NCBI chr10:62,818,931...62,868,686
Ensembl chr10:62,819,069...62,868,671
JBrowse link
G Sez6l seizure related 6 homolog like acts_upstream_of_or_within ISO MGI:104745|MGI:2385295 (PMID:16814779) RGD PMID:16814779 NCBI chr12:44,064,901...44,221,814
Ensembl chr12:44,064,935...44,219,663
JBrowse link
G Sez6l2 seizure related 6 homolog like 2 acts_upstream_of_or_within ISO MGI:104745|MGI:1935121 (PMID:16814779) RGD PMID:16814779 NCBI chr 1:181,557,109...181,577,456
Ensembl chr 1:181,557,109...181,577,456
JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) RGD PMID:17954912 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Whrn whirlin involved_in IEA
ISO
GO_REF:0000107
(MGI:5516521|PMID:24011083)
Ensembl
RGD
PMID:24011083 GO_REF:0000107 MGI:5516521 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 acts_upstream_of_or_within ISO MGI:2671790 (PMID:20502676) RGD PMID:20502676 NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:17409239) RGD PMID:17409239 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) RGD PMID:32675284 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Coq8b coenzyme Q8B involved_in ISS
ISO
GO_REF:0000024
(PMID:27499294)
UniProt
RGD
PMID:27499294 GO_REF:0000024 NCBI chr 1:82,525,578...82,549,182
Ensembl chr 1:82,526,568...82,549,180
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4127354 (PMID:20231455)
Ensembl
RGD
PMID:20231455 GO_REF:0000107 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:107792 (PMID:17664423)
UniProt
RGD
PMID:17664423 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (PMID:17664423) RGD PMID:17664423 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IEP RGD PMID:7182074 RGD:10047093 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO MGI:1856535 (PMID:7891151) RGD PMID:7891151 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
JBrowse link
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:9698327 RGD:704401 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041
JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:9920788 RGD:632499 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 IEP RGD PMID:12843293 RGD:1299593 NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
JBrowse link
G Arhgap32 Rho GTPase activating protein 32 IEP RGD PMID:23226367 RGD:151665335 NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:3664103 (PMID:16880690) RGD PMID:16880690 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Atrn attractin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856082 (PMID:18064672)
Ensembl
RGD
PMID:18064672 GO_REF:0000107 NCBI chr 3:118,110,320...118,244,326
Ensembl chr 3:118,110,229...118,244,322
JBrowse link
G Ccr1 C-C motif chemokine receptor 1 IEP RGD PMID:12541321 RGD:5688179 NCBI chr 8:123,556,286...123,561,841 JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr 8:45,303,848...45,315,005
Ensembl chr 8:45,303,852...45,315,022
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:11226314) RGD PMID:11226314 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828|MGI:2680652 (PMID:11226314), (PMID:11517264) RGD PMID:11226314 PMID:11517264 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (PMID:11517264) RGD PMID:11517264 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IEP RGD PMID:9693786 RGD:8552681 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Ckb creatine kinase B IEP RGD PMID:12093362 RGD:625711 NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315
JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 IEP RGD PMID:12093362 RGD:625711 NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758
JBrowse link
G Cntn1 contactin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3043422 (PMID:18354028)
Ensembl
RGD
PMID:18354028 GO_REF:0000107 NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) RGD PMID:32675284 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO MGI:5297398 (PMID:25877302) RGD PMID:25877302 NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IEP RGD PMID:16820012 RGD:5131267 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:16329132 RGD:1599699 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G En1 engrailed homeobox 1 involved_in ISO UniProtKB:P04426 (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:16542644 RGD:1601098 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295128|PMID:21957071)
UniProt
RGD
PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Fcgr2b Fc gamma receptor 2B involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:4359553|PMID:19668217) RGD PMID:19668217 MGI:4359553 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:3584266|MGI:3723630 (PMID:15983371), (PMID:17619227) RGD PMID:15983371 PMID:17619227 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (PMID:17983671) RGD PMID:17983671 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Gdf10 growth differentiation factor 10 IEP RGD PMID:8605043 RGD:631791 NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343
JBrowse link
G Glud1 glutamate dehydrogenase 1 IEP RGD PMID:7182074 RGD:10047093 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3814764|PMID:18636121)
Ensembl
RGD
PMID:18636121 GO_REF:0000107 MGI:3814764 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:19115409 RGD:10041070 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9764759 RGD:10059383 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP
IMP
RGD PMID:23397157 PMID:21443795 RGD:10403039, RGD:12904969 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Insr insulin receptor IEP RGD PMID:23397157 RGD:10403039 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:9526005 RGD:9685724 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (PMID:17664423) RGD PMID:17664423 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:107792 (PMID:17664423)
UniProt
RGD
PMID:17664423 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (PMID:17664423) RGD PMID:17664423 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:1638738) RGD PMID:1638738 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IEP
ISO
MGI:2158354 (PMID:18571096) RGD PMID:18571096 PMID:14751287 RGD:12743658 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mt-co1 mitochondrially encoded cytochrome c oxidase I IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
Ensembl chr MT:5,323...6,867
JBrowse link
G Mt-nd4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537
JBrowse link
G Myo16 myosin XVI involved_in IEP PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr16:78,884,405...79,364,445
Ensembl chr16:78,884,406...79,248,388
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:10803578 PMID:15876152 RGD:2293531, RGD:5688232 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IEP RGD PMID:10803578 RGD:2293531 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 IEP RGD PMID:10803578 RGD:2293531 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IEP RGD PMID:10803578 RGD:2293531 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IEP RGD PMID:10803578 RGD:2293531 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
JBrowse link
G Ncstn nicastrin IEP RGD PMID:16298244 RGD:13801190 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEP
ISO
(MGI:2159022|PMID:10398678) RGD PMID:10398678 PMID:12242038 MGI:2159022, RGD:1625048 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:21800304) RGD PMID:21800304 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in ISO (MGI:5285161|PMID:20393820) RGD PMID:20393820 MGI:5285161 NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902
JBrowse link
G Ntm neurotrimin IEP RGD PMID:12373100 RGD:2314481 NCBI chr 8:27,376,582...28,366,604
Ensembl chr 8:27,377,773...28,366,595
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IEP RGD PMID:20395366 RGD:11533946 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Pax6 paired box 6 IEP RGD PMID:11688562 RGD:8552644 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5304241|PMID:21871565)
UniProt
RGD
PMID:21871565 GO_REF:0000024 MGI:5304241 NCBI chr20:46,709,631...46,938,704
Ensembl chr20:46,709,649...46,938,708
JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO MGI:3800373 (PMID:18566413) RGD PMID:18566413 NCBI chr18:28,014,145...28,067,148
Ensembl chr18:28,014,145...28,067,064
JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within ISO (PMID:31511635) RGD PMID:31511635 NCBI chr 4:157,796,425...157,804,842
Ensembl chr 4:157,798,808...157,804,842
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17335037 RGD:10059646 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IEP RGD PMID:15763176 RGD:7777107 NCBI chr 1:228,409,605...229,638,794
Ensembl chr 1:228,408,947...229,639,080
JBrowse link
G Psen1 presenilin 1 IEP RGD PMID:16298244 RGD:13801190 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 IEP RGD PMID:9917071 RGD:10045971 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISS
ISO
GO_REF:0000024
(MGI:3703683|PMID:15543146)
(PMID:15543146)
UniProt
RGD
PMID:15543146 GO_REF:0000024 MGI:3703683 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:8653419 RGD:10043831 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (PMID:15842738)
Ensembl
RGD
PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 IEP RGD PMID:22331407 RGD:6484221 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in IEP PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:166,586,581...166,606,661
Ensembl chr 5:166,586,390...166,604,521
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
G Sstr1 somatostatin receptor 1 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 6:75,832,292...75,836,806
Ensembl chr 6:75,832,530...75,836,802
JBrowse link
G Sstr2 somatostatin receptor 2 IEP RGD PMID:9166718 RGD:2325007 NCBI chr10:98,664,204...98,671,370
Ensembl chr10:98,664,216...98,674,351
JBrowse link
G Sstr3 somatostatin receptor 3 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 7:110,092,563...110,109,043
Ensembl chr 7:110,092,575...110,099,769
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24013501)
Ensembl
RGD
PMID:24013501 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544|MGI:2179048|MGI:5587034 (PMID:29615573) RGD PMID:29615573 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903
JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862
JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (MGI:1931348|PMID:2202907) RGD PMID:2202907 MGI:1931348 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:2180190 (PMID:11344116) RGD PMID:11344116 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (PMID:20980600) RGD PMID:20980600 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:20980600) RGD PMID:20980600 NCBI chr13:68,673,702...68,770,846
Ensembl chr13:68,673,722...68,839,742
JBrowse link
G Cbs cystathionine beta synthase acts_upstream_of_or_within ISO MGI:1857139 (PMID:16160063) RGD PMID:16160063 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (PMID:11456442) RGD PMID:11456442 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (PMID:19270340) RGD PMID:19270340 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (PMID:17166916) RGD PMID:17166916 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:11029008) RGD PMID:11029008 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (PMID:21937600) RGD PMID:21937600 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (MGI:5902647|PMID:28002403) RGD PMID:28002403 MGI:5902647 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701
JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861918 (PMID:9338785)
Ensembl
RGD
PMID:9338785 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO
IEA
(MGI:4437543|PMID:19816510)
GO_REF:0000107
RGD
Ensembl
PMID:19816510 GO_REF:0000107 MGI:4437543 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:3621833|PMID:15035989) RGD PMID:15035989 MGI:3621833 NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:3050637 (PMID:15249135) RGD PMID:15249135 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
JBrowse link
G Efhc1 EF-hand domain containing 1 involved_in ISO (PMID:22926142) RGD PMID:22926142 NCBI chr 9:23,375,815...23,414,283
Ensembl chr 9:23,375,840...23,414,283
JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (PMID:7618084) RGD PMID:7618084 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431268|PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391
JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607347|PMID:25078650)
UniProt
RGD
PMID:25078650 GO_REF:0000024 MGI:5607347 NCBI chr 5:151,295,269...151,312,853
Ensembl chr 5:151,296,662...151,311,912
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:16920270) RGD PMID:16920270 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18786357)
Ensembl
RGD
PMID:18786357 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO MGI:2384515 (PMID:12897163) RGD PMID:12897163 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO MGI:2154454 (PMID:10653000), (PMID:9288097) RGD PMID:9288097 PMID:10653000 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (PMID:16079160) RGD PMID:16079160 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO MGI:4950374 (PMID:22405202) RGD PMID:22405202 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:5607284|MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Ahsg alpha-2-HS-glycoprotein IEP RGD PMID:2423927 RGD:1626077 NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999
JBrowse link
G Akirin2 akirin 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5811685|PMID:27871306)
UniProt
RGD
PMID:27871306 GO_REF:0000024 MGI:5811685 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:17678855) RGD PMID:17678855 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO MGI:5573152 (PMID:24220505) RGD PMID:24220505 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (PMID:16625205) RGD PMID:16625205 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:16325379) RGD PMID:16325379 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within IEP
ISO
MGI:4356167 (PMID:23527305) RGD PMID:23527305 PMID:19362129 RGD:11576282 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918
JBrowse link
G Bad BCL2-associated agonist of cell death IEP RGD PMID:9813151 RGD:2315711 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEP
ISO
MGI:1857429 (PMID:15342910) RGD PMID:15342910 PMID:9813151 RGD:2315711 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:9813151 RGD:2315711 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Bcl2a1 BCL2-related protein A1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 8:89,716,914...89,724,998
Ensembl chr 8:89,716,914...89,724,998
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Bnip3 BCL2 interacting protein 3 IEP RGD PMID:16765336 RGD:11561980 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Btbd3 BTB domain containing 3 involved_in ISO
IBA
(MGI:5527009|PMID:24179155)
GO_REF:0000033
RGD
GO_Central
PMID:24179155 GO_REF:0000033 MGI:5527009 NCBI chr 3:125,591,427...125,621,660
Ensembl chr 3:125,591,490...125,619,038
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IEP RGD PMID:10749215 RGD:11576295 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694
JBrowse link
G Ccdc85c coiled-coil domain containing 85C involved_in ISO (MGI:5305566|PMID:22056358) RGD PMID:22056358 MGI:5305566 NCBI chr 6:127,113,440...127,184,328
Ensembl chr 6:127,113,442...127,184,371
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95387 (PMID:25100583)
Ensembl
RGD
PMID:25100583 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:9698328) RGD PMID:9698328 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (PMID:16648472)
Ensembl
RGD
PMID:16648472 GO_REF:0000107 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:32245946)
Ensembl
RGD
PMID:32245946 GO_REF:0000107 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Cep120 centrosomal protein 120 acts_upstream_of_or_within ISO (PMID:17920017) RGD PMID:17920017 NCBI chr18:47,127,979...47,189,964
Ensembl chr18:47,127,981...47,189,964
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893), (PMID:18987363) RGD PMID:18179893 PMID:18987363 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISS
ISO
GO_REF:0000024
(MGI:5288127|PMID:21768377)
UniProt
RGD
PMID:21768377 GO_REF:0000024 MGI:5288127 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (PMID:19074029) RGD PMID:19074029 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (PMID:19074029) RGD PMID:19074029 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 IEP RGD PMID:12801913 RGD:634609 NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302
Ensembl chr 6:133,337,039...133,354,302
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:7735332 RGD:11565823 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:7735332 RGD:11565823 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
JBrowse link
G Dab1 DAB adaptor protein 1 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Dcc DCC netrin 1 receptor IEP RGD PMID:22473424 RGD:10411906 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3641051 (PMID:18997113) RGD PMID:18997113 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IEP RGD PMID:14597197 RGD:152975667 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Dmd dystrophin IEP RGD PMID:1454857 RGD:12880362 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:1928281|MGI:88355|MGI:95388 (PMID:12764040), (PMID:16892058), (PMID:25100583) RGD PMID:12764040 PMID:16892058 PMID:25100583 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:95387 (PMID:12764040) RGD PMID:12764040 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) RGD PMID:30186101 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Fat4 FAT atypical cadherin 4 involved_in ISO (MGI:4821246|PMID:19506035) RGD PMID:19506035 MGI:4821246 NCBI chr 2:121,927,266...122,056,700
Ensembl chr 2:121,927,942...122,056,707
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409
JBrowse link
G Flna filamin A IEP RGD PMID:22076441 RGD:11564351 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) RGD PMID:22726835 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO
IEA
(PMID:18987363)
GO_REF:0000107
RGD
Ensembl
PMID:18987363 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
JBrowse link
G Gng12 G protein subunit gamma 12 IEP RGD PMID:9003074 RGD:2314446 NCBI chr 4:96,011,118...96,134,767
Ensembl chr 4:96,010,952...96,134,712
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 IEP RGD PMID:14597197 RGD:152975667 NCBI chr 2:165,949,379...166,069,510
Ensembl chr 2:165,947,521...166,069,510
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928279|MGI:1928281|MGI:2655232|MGI:2655237 (PMID:10963597), (PMID:12657691) RGD PMID:10963597 PMID:12657691 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19409459 RGD:2325985 NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19409459 RGD:2325985 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Grip1 glutamate receptor interacting protein 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273
JBrowse link
G H2ax H2A.X variant histone IEP RGD PMID:3622934 RGD:8693731 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2677899 (PMID:12972594)
Ensembl
RGD
PMID:12972594 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP
IDA
RGD PMID:22102872 PMID:18054780 RGD:10002783, RGD:10041004 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233
JBrowse link
G Kdm1a lysine demethylase 1A IEP RGD PMID:20164337 RGD:9588288 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Kif26a kinesin family member 26A involved_in ISO (PMID:36228617) RGD PMID:36228617 NCBI chr 6:131,214,839...131,250,874
Ensembl chr 6:131,214,861...131,250,320
JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4399044 (PMID:19820705)
(MGI:5699500|PMID:26371318), (MGI:5817507|PMID:28053041)
Ensembl
RGD
PMID:19820705 PMID:26371318 PMID:28053041 GO_REF:0000107 MGI:5699500 MGI:5817507 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Lrp1 LDL receptor related protein 1 IEP RGD PMID:8930375 RGD:10046019 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:16920270) RGD PMID:16920270 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Lrp8 LDL receptor related protein 8 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
JBrowse link