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Gene: Usp9x (ubiquitin specific peptidase 9, X-linked) Rattus norvegicus
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Symbol: Usp9x
Name: ubiquitin specific peptidase 9, X-linked
Description: Predicted to have several functions, including co-SMAD binding activity; ubiquitin protein ligase binding activity; and ubiquitinyl hydrolase activity. Predicted to be involved in several processes, including nervous system development; positive regulation of DNA demethylation; and transmembrane receptor protein serine/threonine kinase signaling pathway. Predicted to localize to the apical part of cell; cytosol; and growth cone. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability. Orthologous to human USP9X (ubiquitin specific peptidase 9 X-linked); INTERACTS WITH 17alpha-ethynylestradiol; 2,6-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC363445; probable ubiquitin carboxyl-terminal hydrolase FAF-X; RGD1560056; similar to ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila); ubiquitin specific peptidase 9, X chromosome
Orthologs:
Homo sapiens (human) : USP9X (ubiquitin specific peptidase 9 X-linked)  HGNC  Alliance
Mus musculus (house mouse) : Usp9x (ubiquitin specific peptidase 9, X chromosome)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp9x (ubiquitin specific peptidase 9 X-linked)
Pan paniscus (bonobo/pygmy chimpanzee) : USP9X (ubiquitin specific peptidase 9, X-linked)
Canis lupus familiaris (dog) : USP9X (ubiquitin specific peptidase 9 X-linked)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp9x (ubiquitin specific peptidase 9 X-linked)
Sus scrofa (pig) : USP9X (ubiquitin specific peptidase 9 X-linked)
Chlorocebus sabaeus (African green monkey) : USP9X (ubiquitin specific peptidase 9 X-linked)
Heterocephalus glaber (naked mole-rat) : Usp9x (ubiquitin specific peptidase 9 X-linked)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X10,510,033 - 10,660,555 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX10,510,033 - 10,630,297 (-)Ensembl
Rnor_5.0X11,308,415 - 11,458,704 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X21,606,330 - 21,718,042 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX10,119,391 - 10,226,802 (-)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Usp9x
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560056
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.