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Gene: Tubgcp2 (tubulin gamma complex component 2) Rattus norvegicus

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Symbol:

Tubgcp2

Name:

tubulin gamma complex component 2

RGD ID:

1309597

Description:

Predicted to be involved in brain development and neuron migration. Predicted to be located in centrosome and nucleoplasm. Human ortholog(s) of this gene implicated in pachygyria, microcephaly, developmental delay, and dysmorphic facies, with or without seizures. Orthologous to human TUBGCP2 (tubulin gamma complex component 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

a disintegrin and metalloprotease domain 8; Adam8; gamma-tubulin complex component 2; LOC309098; tubulin, gamma complex associated protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TUBGCP2 (tubulin gamma complex component 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tubgcp2 (tubulin, gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tubgcp2 (tubulin gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TUBGCP2 (tubulin gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TUBGCP2 (tubulin gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tubgcp2 (tubulin gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TUBGCP2 (tubulin gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TUBGCP2 (tubulin gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tubgcp2 (tubulin gamma complex component 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TUBGCP2 (tubulin gamma complex component 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tubgcp2 (tubulin, gamma complex component 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tubgcp2 (tubulin, gamma complex associated protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Grip84	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SPC97	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tubgcp2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	204,220,725 - 204,247,460 (-)	NCBI		GRCr8
mRatBN7.2	1	194,791,113 - 194,817,807 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	194,792,142 - 194,817,619 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	203,152,995 - 203,173,541 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	210,288,295 - 210,308,703 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	202,962,126 - 202,982,535 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	212,333,740 - 212,359,352 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	212,333,741 - 212,354,273 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	219,251,911 - 219,277,442 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	199,796,234 - 199,816,873 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	199,946,227 - 199,971,772 (-)	NCBI
Celera	1	192,469,653 - 192,490,186 (-)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

distal 10q deletion syndrome (ISO)

pachygyria, microcephaly, developmental delay, and dysmorphic facies, with or without seizures (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

acrolein (ISO)

acrylamide (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

copper(II) sulfate (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

diethylstilbestrol (ISO)

ethanol (ISO)

folic acid (ISO)

ivermectin (ISO)

oxaliplatin (EXP)

ozone (ISO)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

rotenone (ISO)

sodium arsenite (ISO)

temozolomide (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

brain development (ISO)

microtubule nucleation (IEA)

neuron migration (ISO)

Cellular Component

centrosome (ISO)

ciliary basal body (IEA,ISO)

cytoplasm (IEA)

microtubule (IEA)

microtubule organizing center (ISO)

nucleoplasm (IEA,ISO)

spindle pole (IEA)

Molecular Function

gamma-tubulin binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:16025302	PMID:19946888	PMID:21399614

Genomics

Comparative Map Data

Tubgcp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	204,220,725 - 204,247,460 (-)	NCBI		GRCr8
mRatBN7.2	1	194,791,113 - 194,817,807 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	194,792,142 - 194,817,619 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	203,152,995 - 203,173,541 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	210,288,295 - 210,308,703 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	202,962,126 - 202,982,535 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	212,333,740 - 212,359,352 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	212,333,741 - 212,354,273 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	219,251,911 - 219,277,442 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	199,796,234 - 199,816,873 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	199,946,227 - 199,971,772 (-)	NCBI
Celera	1	192,469,653 - 192,490,186 (-)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

TUBGCP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	133,278,635 - 133,312,337 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	133,278,635 - 133,318,823 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	135,092,139 - 135,125,841 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	134,943,128 - 134,972,634 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	134,982,076 - 135,011,224	NCBI
Celera	10	128,394,113 - 128,423,294 (+)	NCBI		Celera
Cytogenetic Map	10	q26.3	NCBI
HuRef	10	128,638,963 - 128,671,700 (-)	NCBI		HuRef
CHM1_1	10	135,374,005 - 135,406,570 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	134,234,256 - 134,266,774 (-)	NCBI		T2T-CHM13v2.0

Tubgcp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	139,575,868 - 139,616,587 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	139,575,868 - 139,616,582 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	139,995,955 - 140,036,674 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	139,995,955 - 140,036,669 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	147,181,854 - 147,222,249 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	139,847,316 - 139,887,586 (-)	NCBI		MGSCv36	mm8
Celera	7	139,799,772 - 139,834,443 (-)	NCBI		Celera
Cytogenetic Map	7	F4	NCBI
cM Map	7	84.98	NCBI

Tubgcp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955477	10,907,298 - 10,932,649 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955477	10,909,213 - 10,932,833 (-)	NCBI	ChiLan1.0	ChiLan1.0

TUBGCP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	145,403,707 - 145,436,549 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	145,409,063 - 145,441,941 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	10	134,189,800 - 134,214,759 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	134,187,115 - 134,214,693 (-)	Ensembl	panpan1.1		panPan2

TUBGCP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	40,865,742 - 40,881,105 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	40,865,748 - 40,881,119 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1

Tubgcp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	6,137,638 - 6,156,590 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	19,402,526 - 19,421,976 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	19,404,651 - 19,423,601 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TUBGCP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	141,233,856 - 141,253,359 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	141,233,854 - 141,253,377 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	153,195,950 - 153,216,335 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TUBGCP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	53,129,752 - 53,157,576 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	53,126,973 - 53,151,631 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	41,264,267 - 41,286,531 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tubgcp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624737	13,436,046 - 13,459,101 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	82
Count of miRNA genes:	76
Interacting mature miRNAs:	78
Transcripts:	ENSRNOT00000024573
Prediction methods:	Microtar, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	186658830	266453731	Rat
1354653	Despr9	Despair related QTL 9		0.00019	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	177339686	222339686	Rat
2293673	Bss27	Bone structure and strength QTL 27	18.63	0.0001	femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	1	181059071	226059071	Rat
2293677	Bss41	Bone structure and strength QTL 41	9.38	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	1	181059071	226059071	Rat
70160	Bw18	Body weight QTL 18	5.7		body mass (VT:0001259)	body weight (CMO:0000012)	1	153679879	205813246	Rat
1549830	Bss1	Bone structure and strength QTL 1	4.8		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	182039247	227039247	Rat
70163	Bw20	Body weight QTL 20	5.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	183564652	228564652	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	186658830	266453731	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	176288899	270518180	Rat
631838	Niddm36	Non-insulin dependent diabetes mellitus QTL 36		0.01	insulin secretion trait (VT:0003564)	calculated pancreatic islet insulin release measurement (CMO:0001217)	1	193964073	238964073	Rat
1354636	Lmblg1	Limb length QTL 1	6.4		tibia length (VT:0004357)	tibia length (CMO:0000450)	1	160573753	210707719	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
2293689	Bss47	Bone structure and strength QTL 47	7.25	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	1	181059071	226059071	Rat
61341	Bp26	Blood pressure QTL 26			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	139442053	223964440	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
1354634	Kidm12	Kidney mass QTL 12	3.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	1	160573753	210707719	Rat
4889428	Stresp24	Stress response QTL 24		0.05	heart pumping trait (VT:2000009)	absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)	1	165278545	210278545	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
61343	Bp28	Blood pressure QTL 28			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	161077990	206077990	Rat
2293693	Bss22	Bone structure and strength QTL 22	33.52	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	1	181059071	226059071	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	99645382	221502378	Rat
2300161	Bmd43	Bone mineral density QTL 43	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	181059071	226059071	Rat
1300145	Rf7	Renal function QTL 7	2.96		urine creatinine amount (VT:0010540)	urine creatinine level (CMO:0000125)	1	194575422	239575422	Rat
61347	Bp197	Blood pressure QTL 197	4.2		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	1	168063662	213063662	Rat
8655655	Arrd2	Age-related retinal degeneration QTL 2	7.79		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	193400541	238400541	Rat
61348	Bp30	Blood pressure QTL 30	2.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	159894717	207261263	Rat
2303622	Vencon6	Ventilatory control QTL 6		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	1	163992710	208992710	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	200449456	256003563	Rat
631214	Bw61	Body weight QTL61	3.4	0.0001	intramuscular adipose amount (VT:0010044)	intramuscular fat area (CMO:0001162)	1	182535316	227535316	Rat
7771612	Cm80	Cardiac mass QTL 80	8.4		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	1	146080545	243492863	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	103779152	223964440	Rat
631205	Bp196	Blood pressure QTL 196	4	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	98879955	208479939	Rat
2300174	Bmd42	Bone mineral density QTL 42	8.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	1	181059071	226059071	Rat
737828	Hcas3	Hepatocarcinoma susceptibility QTL 3	4.9		liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	1	153679879	232414077	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
1358886	Bp260	Blood pressure QTL 260	3.67		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	160574007	235238518	Rat
2293654	Bss30	Bone structure and strength QTL 30	32.65	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	1	181059071	226059071	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
2300187	Bmd41	Bone mineral density QTL 41	8.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	181059071	226059071	Rat
8552891	Epfw5	Epididymal fat weight QTL 5	4.4		epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	1	202543537	247543537	Rat
1359018	Hrtrt20	Heart rate QTL 20	3.08		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	194786607	207590403	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
70209	Niddm23	Non-insulin dependent diabetes mellitus QTL 23	2.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	162753891	207753891	Rat
634312	Bp143	Blood pressure QTL 143	3	0.0002	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	203300512	229359342	Rat
1358294	Bw37	Body weight QTL 37	5	0.000011	body mass (VT:0001259)	body weight (CMO:0000012)	1	180739993	225739993	Rat
61378	Bp43	Blood pressure QTL 43	22.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	191177449	205813246	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
724559	Pancm1	Pancreatic morphology QTL 1	7.1		islet of Langerhans morphology trait (VT:0005215)	pancreatic islet damage composite score (CMO:0001156)	1	191190115	223964326	Rat
2312420	Pur17	Proteinuria QTL 17	7.1	0.0001	urine protein amount (VT:0005160)	urine total protein excretion rate (CMO:0000756)	1	172718770	228180370	Rat
10059600	Bp378	Blood pressure QTL 378	3.08	0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
1354591	Cm36	Cardiac mass QTL 36	4.1		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	111949780	210707719	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
631260	Tcas2	Tongue tumor susceptibility QTL 2	4.93		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	1	201915593	208479939	Rat
619614	Bp78	Blood pressure QTL 78		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	178547286	206690557	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	194786607	262083703	Rat
634321	Hc1	Hypercalciuria QTL 1	2.91		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	188241285	250779312	Rat
724562	Rends1	Renal damage susceptibility QTL 1		0.05	kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	1	139442053	223964440	Rat
1300168	Bp170	Blood pressure QTL 170	2.76		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	192995199	237995199	Rat
61403	Niddm4	Non-insulin dependent diabetes mellitus QTL 4			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	201464383	246464383	Rat
2292222	Bp307	Blood pressure QTL 307	3.06	0.0014	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
2292220	Bp306	Blood pressure QTL 306	3.47	0.00087	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
1641926	Teswt2	Testicular weight QTL 2	2.82		testis mass (VT:1000644)	both testes wet weight (CMO:0000175)	1	203675682	248675682	Rat
1354615	Cm32	Cardiac mass QTL 32	5.2		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	111949780	210707719	Rat
1600380	Niddm70	Non-insulin dependent diabetes mellitus QTL 70	3.1	0.0008	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	185979875	230979875	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
1582206	Kidm33	Kidney mass QTL 33	6.9		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	197807365	233480676	Rat
1354620	Kidm19	Kidney mass QTL 19	4		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	210707719	Rat
8655855	Arrd3	Age-related retinal degeneration QTL 3	3.07		lens clarity trait (VT:0001304)	cataract incidence/prevalence measurement (CMO:0001585)	1	193400541	238400541	Rat
634338	Hcar4	Hepatocarcinoma resistance QTL 4	4.6		liver integrity trait (VT:0010547)	liver tumorous lesion number to liver area ratio (CMO:0001210)	1	202851915	223964440	Rat
6480783	Insul19	Insulin level QTL 19	4.33		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	203300512	213659238	Rat
1354618	Kidm15	Kidney mass QTL 15	5		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	1	165707719	210707719	Rat
6903303	Scl34	Serum cholesterol QTL 34	2.5	0.0033	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	173363824	227535316	Rat
6480780	Insul18	Insulin level QTL 18	4.11		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	203300512	205777982	Rat
2293083	Iddm25	Insulin dependent diabetes mellitus QTL 25	4.18		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	191260175	236260175	Rat
1354606	Bp246	Blood pressure QTL 246	3.6		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	111949780	228180370	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	185857683	270518180	Rat
2325727	Pia41	Pristane induced arthritis QTL 41			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	188241285	233241285	Rat
1354602	Bw35	Body weight QTL 35	12.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	210707719	Rat
631670	Iddm10	Insulin dependent diabetes mellitus QTL 10	1.9		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	183564652	205813246	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006230457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006230458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006230459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006230460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010053003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC166857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024573 ⟹ ENSRNOP00000024573

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	194,792,142 - 194,812,676 (-)	Ensembl
Rnor_6.0 Ensembl	1	212,333,741 - 212,354,273 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105932 ⟹ ENSRNOP00000096948

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	194,792,950 - 194,817,619 (-)	Ensembl

RefSeq Acc Id:

NM_001107560 ⟹ NP_001101030

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,221,795 - 204,242,329 (-)	NCBI
mRatBN7.2	1	194,792,141 - 194,812,676 (-)	NCBI
Rnor_6.0	1	212,333,740 - 212,354,273 (-)	NCBI
Rnor_5.0	1	219,251,911 - 219,277,442 (-)	NCBI
RGSC_v3.4	1	199,796,234 - 199,816,873 (-)	RGD
Celera	1	192,469,653 - 192,490,186 (-)	RGD

Sequence:

show sequence

ACATTGGTATGTTGGTGTCTCAGAGCTAAATTATGAGTGAATTTCGGATTCACCATGATGTCAA
TGAGCTGCTCAGCCTGCTGCGTATCCATGGTGGGGACGGGGCTGAGGTCTACATTGACCTGCTG
CAGAAGAACCGGACACCATATGTTACGACAACAGTGTCTGCCCACAGTGCCAAGGTCAAAATTG
CAGAGTTTTCTCGAACGCCTGAGGACTTTTTAAAGAAATATGATGAACTGAAATCTAAAAATAC
AAGGAACCTTGACCCACTGGTGTACCTGTTATCAAAACTCACAGAAGACAAAGAGACACTTCAG
TATTTGCAACAGAATGCAAAGGAAAGAGCTGAACTTGCAGCTAGTGCTGCAGCCAGCAGTGCCA
CCGGTTTCAGCATCCCTGTTGCAGCCTCTAAGATGTCCACACAGGAGCTAGAGGAACTGAGGAA
GCAGCTTGGCAGTGTGGCTACAGGCTCCACACTGCAGCAGTCTCTGGAACTTACAAGAAAGATG
CTTCGAGACAAACAGAACAAAAAAAATTCAGGCCAGCCCCTCCCAGTCTTCCCAGCATGGGTAT
ATGAGAGACCAACACTGGCTGGAGATTTCCTGATTGGTTCGGGCTTGAGCTCAGACACAACTTT
GCCTATAGGTACATTGCCCTTGGCCTCCCAGGAGTCAGCAGTGGTGGAAGATCTGCTCTATGTG
CTTGTGGGAGTGGATGGCAGGTACATCACTGCTCAGCCTTTGGCTGGGAGGCAGAACCGTACCT
TCCTTGTAGATCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTGTGGC
TGCCAGCTACTCTACTGTGACCAGGTTCATTGAGGAGAAGTCTTCATTTGAATATGGGCAGGTG
AACCATGCCTTGGCTGCTGCCATGAGAACCCTGGTGAAGGAATACCTGATTCTCGTCACACAAC
TGGAACAGCTACACAGGCAGGGCCTCCTCTCGCTGCAGAAGCTCTGGTTCTACATCCAGCCAGC
CATGCGTACCATTGACATCCTGGCCTCCCTTGCCACCTCCGTGGATAAAGGCGAGTGTGTTGGC
GGGTCGACGCTGAGCCTTCTCCATGATAGGAGCTTCAACTACACAGGGGACAGCCAGGCGCAGG
AGCTGTGCCTCTATCTGACCAAGGCGGCCAGCGCTCCTTACTTTGAGATCCTGGAGGAGTGGAT
CTACAGAGGCGTCATTCACGACCCATACAGTGAGTTCATGGTGGAGGAGCACGAGCTGCGGAAG
GAGAAGATACAGGAGGACTACAATGACAAGTACTGGGACCAGCGCTACACTGTGCTGCCACAGC
AGATCCCATCCTTCCTGCAGAAGGTAGCAGGCAAGATCCTCAGCACAGGAAAATACCTAAATGT
GGTCAGAGAATGTGGTCATGATGTCACCTGTCCCGTAGCCAAAGAGATCATCTATACCCTCAAA
GAGCGGGCATATGTGGAGCAGATTGAGAAAGCGTTCAATTATGCCAGCAAAGTGCTGCTGGACT
TCCTCATGGAGGAGAAGGAGCTGGTGGCCCACCTGAGGTCCATCAAGCGCTACTTCCTGATGGA
CCAGGGGGACTTCTTTGTGCACTTCATGGACCTGACTGAGGAGGAGCTCAGGAAGCCAGTAGAG
GACATTACGCCCACACGCCTGGAGGCTCTGTTGGAGCTGGCCCTGAGAATGAGCACTGCCAACA
CTGACCCCTTCAAAGACGACCTCAAGATTGACCTGATGCCTCACGACCTTATCACTCAGCTTTT
GCGGGTTCTGGCCATAGAGACCAAGCAAGAGAAGGCAATGACCCATGCTGACCCCACGGAGCTC
ACTCTGAGTGGTCTCGAGGCTTTCTCCTTTGACTATATGGTCAAATGGCCCTTGTCACTGATTA
TTAACAGGAAGGCACTCACCCGCTACCAGATGCTCTTCCGACACATGTTCTACTGCAAGCACGT
GGAGCGACAGCTCTGCAGTGTCTGGATCAGCAACAAGACAGCCAAGCAGCATGCGCTGCACTCC
GCCAAGTGGTTTGCTGGTGCTTTCACGTTGCGGCAGCGAATGCTCAACTTCGTCCAGAATATTC
AGTACTACATGATGTTTGAAGTAATGGAACCGACCTGGCACATCCTTGAGAAAAACCTGAAATC
TGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGTTTCCTTGACAACTGCCTGAAGGAC
TGCATGCTGACCAACCCTGAGCTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTGTGCGTCATGT
TCACCAACTGTATGCAGAAATTTACACAGAGTATGAAACTGGACAGTGAACTAGGCCGTCTGAC
ACTGGATCAGGGTAGTGTGCAGGGGCCACCCCCAGAGAGTGAGCGGATTGATGATCGTCCCCGG
AAGGAGCCTACCAGGAAGCACCTGCCTGAGCATGTGGACACTCCTCAGCTGTCCTCCGGCTTCG
AGGCCACCATCAACAACTTTGACAAAAACTTCTCTGCCCATCTTCTTGATTTGCTGGCCCGACT
AAGTGTCTACAGCACCAGTGACTGTGAACACGGCATGGCCAGTGTCATCTCCAGGCTAGATTTC
AATGGTTTCTATGCGGAACGCCTGGAACGTCTGTCTGCAGAAAGGAGTCAGAAAGCTGCCCCCC
AAGTGCCTGTCCCAAGGGGACCCCCAGCACCAGCATCCAGGGTGGCCATTCCTGCTCAATGAGC
TTACTTGTTAAATATCATATTTCTGGAACCTGGGTGTTATACGTTATTACTGCTTAAATATGGT
ATGAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006230457 ⟹ XP_006230519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,220,725 - 204,247,460 (-)	NCBI
mRatBN7.2	1	194,791,179 - 194,817,807 (-)	NCBI
Rnor_6.0	1	212,333,740 - 212,359,352 (-)	NCBI
Rnor_5.0	1	219,251,911 - 219,277,442 (-)	NCBI

Sequence:

show sequence

TTCGGCCACCGTCGGAGGGGTGGTGACGGACGTGACGTCTATTAACTTCCTGTGGCGACCCTGC
GGGGCGGGACGCGACGCGCGGAGGAAAACATTGGTATGTTGGTGTCTCAGAGCTAAATTATGAG
TGAATTTCGGATTCACCATGATGTCAATGAGCTGCTCAGCCTGCTGCGTATCCATGGTGGGGAC
GGGGCTGAGGTCTACATTGACCTGCTGCAGAAGAACCGGACACCATATGTTACGACAACAGTGT
CTGCCCACAGTGCCAAGGTCAAAATTGCAGAGTTTTCTCGAACGCCTGAGGACTTTTTAAAGAA
ATATGATGAACTGAAATCTAAAAATACAAGGAACCTTGACCCACTGGTGTACCTGTTATCAAAA
CTCACAGAAGACAAAGAGACACTTCAGTATTTGCAACAGAATGCAAAGGAAAGAGCTGAACTTG
CAGCTAGTGCTGCAGCCAGCAGTGCCACCGGTTTCAGCATCCCTGTTGCAGCCTCTAAGATGTC
CACACAGGAGCTAGAGGAACTGAGGAAGCAGCTTGGCAGTGTGGCTACAGGCTCCACACTGCAG
CAGTCTCTGGAACTTACAAGAAAGATGCTTCGAGACAAACAGAACAAAAAAAATTCAGGCCAGC
CCCTCCCAGTCTTCCCAGCATGGGTATATGAGAGACCAACACTGGCTGGAGATTTCCTGATTGG
TTCGGGCTTGAGCTCAGACACAACTTTGCCTATAGGTACATTGCCCTTGGCCTCCCAGGAGTCA
GCAGTGGTGGAAGATCTGCTCTATGTGCTTGTGGGAGTGGATGGCAGGTACATCACTGCTCAGC
CTTTGGCTGGGAGGCAGAACCGTACCTTCCTTGTAGATCCCAACCTGGACCTGTCCATCCGGGA
GCTAGTAAACAGAATCCTCCCTGTGGCTGCCAGCTACTCTACTGTGACCAGGTTCATTGAGGAG
AAGTCTTCATTTGAATATGGGCAGGTGAACCATGCCTTGGCTGCTGCCATGAGAACCCTGGTGA
AGGAATACCTGATTCTCGTCACACAACTGGAACAGCTACACAGGCAGGGCCTCCTCTCGCTGCA
GAAGCTCTGGTTCTACATCCAGCCAGCCATGCGTACCATTGACATCCTGGCCTCCCTTGCCACC
TCCGTGGATAAAGGCGAGTGTGTTGGCGGGTCGACGCTGAGCCTTCTCCATGATAGGAGCTTCA
ACTACACAGGGGACAGCCAGGCGCAGGAGCTGTGCCTCTATCTGACCAAGGCGGCCAGCGCTCC
TTACTTTGAGATCCTGGAGGAGTGGATCTACAGAGGCGTCATTCACGACCCATACAGTGAGTTC
ATGGTGGAGGAGCACGAGCTGCGGAAGGAGAAGATACAGGAGGACTACAATGACAAGTACTGGG
ACCAGCGCTACACTGTGCTGCCACAGCAGATCCCATCCTTCCTGCAGAAGGTAGCAGGCAAGAT
CCTCAGCACAGGAAAATACCTAAATGTGGTCAGAGAATGTGGTCATGATGTCACCTGTCCCGTA
GCCAAAGAGATCATCTATACCCTCAAAGAGCGGGCATATGTGGAGCAGATTGAGAAAGCGTTCA
ATTATGCCAGCAAAGTGCTGCTGGACTTCCTCATGGAGGAGAAGGAGCTGGTGGCCCACCTGAG
GTCCATCAAGCGCTACTTCCTGATGGACCAGGGGGACTTCTTTGTGCACTTCATGGACCTGACT
GAGGAGGAGCTCAGGAAGCCAGTAGAGGACATTACGCCCACACGCCTGGAGGCTCTGTTGGAGC
TGGCCCTGAGAATGAGCACTGCCAACACTGACCCCTTCAAAGACGACCTCAAGATTGACCTGAT
GCCTCACGACCTTATCACTCAGCTTTTGCGGGTTCTGGCCATAGAGACCAAGCAAGAGAAGGCA
ATGACCCATGCTGACCCCACGGAGCTCACTCTGAGTGGTCTCGAGGCTTTCTCCTTTGACTATA
TGGTCAAATGGCCCTTGTCACTGATTATTAACAGGAAGGCACTCACCCGCTACCAGATGCTCTT
CCGACACATGTTCTACTGCAAGCACGTGGAGCGACAGCTCTGCAGTGTCTGGATCAGCAACAAG
ACAGCCAAGCAGCATGCGCTGCACTCCGCCAAGTGGTTTGCTGGTGCTTTCACGTTGCGGCAGC
GAATGCTCAACTTCGTCCAGAATATTCAGTACTACATGATGTTTGAAGTAATGGAACCGACCTG
GCACATCCTTGAGAAAAACCTGAAATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACA
AGTTTCCTTGACAACTGCCTGAAGGACTGCATGCTGACCAACCCTGAGCTGCTGAAGGTTTTCT
CCAAGCTCATGTCCGTGTGCGTCATGTTCACCAACTGTATGCAGAAATTTACACAGAGTATGAA
ACTGGACAGTGAACTAGGCCGTCTGACACTGGATCAGGGTAGTGTGCAGGGGCCACCCCCAGAG
AGTGAGCGGATTGATGATCGTCCCCGGAAGGAGCCTACCAGGAAGCACCTGCCTGAGCATGTGG
ACACTCCTCAGCTGTCCTCCGGCTTCGAGGCCACCATCAACAACTTTGACAAAAACTTCTCTGC
CCATCTTCTTGATTTGCTGGCCCGACTAAGTGTCTACAGCACCAGTGACTGTGAACACGGCATG
GCCAGTGTCATCTCCAGGCTAGATTTCAATGGTTTCTATGCGGAACGCCTGGAACGTCTGTCTG
CAGAAAGGAGTCAGAAAGCTGCCCCCCAAGTGCCTGTCCCAAGGGGACCCCCAGCACCAGCATC
CAGGGTGGCCATTCCTGCTCAATGAGCTTACTTGTTAAATATCATATTTCTGGAACCTGGGTGT
TATACGTTATTACTGCTTAAATATGGTATGAGTTTCCA

hide sequence

RefSeq Acc Id:

XM_006230458 ⟹ XP_006230520

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,220,725 - 204,247,332 (-)	NCBI
mRatBN7.2	1	194,791,179 - 194,817,673 (-)	NCBI
Rnor_6.0	1	212,333,740 - 212,359,269 (-)	NCBI
Rnor_5.0	1	219,251,911 - 219,277,442 (-)	NCBI

Sequence:

show sequence

GGAGGTGAGTCAGGGCTGGGTCTATGTTGTGGCGGGAACCGGTCGGAGAAGGGCGGGGCTGGAG
CCGGGCGCGGGATCCGGAACGCGAGCCAGGCTGGCCTGCAGCGGTGAAGAGCCTGATTCTCTTG
GGCCTCTGCCGCCGGCGGTCCGGTCTACCAGCCTGGGCTTGTCCCCAGCTCCACGGAAAACATT
GGTATGTTGGTGTCTCAGAGCTAAATTATGAGTGAATTTCGGATTCACCATGATGTCAATGAGC
TGCTCAGCCTGCTGCGTATCCATGGTGGGGACGGGGCTGAGGTCTACATTGACCTGCTGCAGAA
GAACCGGACACCATATGTTACGACAACAGTGTCTGCCCACAGTGCCAAGGTCAAAATTGCAGAG
TTTTCTCGAACGCCTGAGGACTTTTTAAAGAAATATGATGAACTGAAATCTAAAAATACAAGGA
ACCTTGACCCACTGGTGTACCTGTTATCAAAACTCACAGAAGACAAAGAGACACTTCAGTATTT
GCAACAGAATGCAAAGGAAAGAGCTGAACTTGCAGCTAGTGCTGCAGCCAGCAGTGCCACCGGT
TTCAGCATCCCTGTTGCAGCCTCTAAGATGTCCACACAGGAGCTAGAGGAACTGAGGAAGCAGC
TTGGCAGTGTGGCTACAGGCTCCACACTGCAGCAGTCTCTGGAACTTACAAGAAAGATGCTTCG
AGACAAACAGAACAAAAAAAATTCAGGCCAGCCCCTCCCAGTCTTCCCAGCATGGGTATATGAG
AGACCAACACTGGCTGGAGATTTCCTGATTGGTTCGGGCTTGAGCTCAGACACAACTTTGCCTA
TAGGTACATTGCCCTTGGCCTCCCAGGAGTCAGCAGTGGTGGAAGATCTGCTCTATGTGCTTGT
GGGAGTGGATGGCAGGTACATCACTGCTCAGCCTTTGGCTGGGAGGCAGAACCGTACCTTCCTT
GTAGATCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTGTGGCTGCCA
GCTACTCTACTGTGACCAGGTTCATTGAGGAGAAGTCTTCATTTGAATATGGGCAGGTGAACCA
TGCCTTGGCTGCTGCCATGAGAACCCTGGTGAAGGAATACCTGATTCTCGTCACACAACTGGAA
CAGCTACACAGGCAGGGCCTCCTCTCGCTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATGC
GTACCATTGACATCCTGGCCTCCCTTGCCACCTCCGTGGATAAAGGCGAGTGTGTTGGCGGGTC
GACGCTGAGCCTTCTCCATGATAGGAGCTTCAACTACACAGGGGACAGCCAGGCGCAGGAGCTG
TGCCTCTATCTGACCAAGGCGGCCAGCGCTCCTTACTTTGAGATCCTGGAGGAGTGGATCTACA
GAGGCGTCATTCACGACCCATACAGTGAGTTCATGGTGGAGGAGCACGAGCTGCGGAAGGAGAA
GATACAGGAGGACTACAATGACAAGTACTGGGACCAGCGCTACACTGTGCTGCCACAGCAGATC
CCATCCTTCCTGCAGAAGGTAGCAGGCAAGATCCTCAGCACAGGAAAATACCTAAATGTGGTCA
GAGAATGTGGTCATGATGTCACCTGTCCCGTAGCCAAAGAGATCATCTATACCCTCAAAGAGCG
GGCATATGTGGAGCAGATTGAGAAAGCGTTCAATTATGCCAGCAAAGTGCTGCTGGACTTCCTC
ATGGAGGAGAAGGAGCTGGTGGCCCACCTGAGGTCCATCAAGCGCTACTTCCTGATGGACCAGG
GGGACTTCTTTGTGCACTTCATGGACCTGACTGAGGAGGAGCTCAGGAAGCCAGTAGAGGACAT
TACGCCCACACGCCTGGAGGCTCTGTTGGAGCTGGCCCTGAGAATGAGCACTGCCAACACTGAC
CCCTTCAAAGACGACCTCAAGATTGACCTGATGCCTCACGACCTTATCACTCAGCTTTTGCGGG
TTCTGGCCATAGAGACCAAGCAAGAGAAGGCAATGACCCATGCTGACCCCACGGAGCTCACTCT
GAGTGGTCTCGAGGCTTTCTCCTTTGACTATATGGTCAAATGGCCCTTGTCACTGATTATTAAC
AGGAAGGCACTCACCCGCTACCAGATGCTCTTCCGACACATGTTCTACTGCAAGCACGTGGAGC
GACAGCTCTGCAGTGTCTGGATCAGCAACAAGACAGCCAAGCAGCATGCGCTGCACTCCGCCAA
GTGGTTTGCTGGTGCTTTCACGTTGCGGCAGCGAATGCTCAACTTCGTCCAGAATATTCAGTAC
TACATGATGTTTGAAGTAATGGAACCGACCTGGCACATCCTTGAGAAAAACCTGAAATCTGCCT
CCAACATTGACGATGTCCTTGGCCACCACACAAGTTTCCTTGACAACTGCCTGAAGGACTGCAT
GCTGACCAACCCTGAGCTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTGTGCGTCATGTTCACC
AACTGTATGCAGAAATTTACACAGAGTATGAAACTGGACAGTGAACTAGGCCGTCTGACACTGG
ATCAGGGTAGTGTGCAGGGGCCACCCCCAGAGAGTGAGCGGATTGATGATCGTCCCCGGAAGGA
GCCTACCAGGAAGCACCTGCCTGAGCATGTGGACACTCCTCAGCTGTCCTCCGGCTTCGAGGCC
ACCATCAACAACTTTGACAAAAACTTCTCTGCCCATCTTCTTGATTTGCTGGCCCGACTAAGTG
TCTACAGCACCAGTGACTGTGAACACGGCATGGCCAGTGTCATCTCCAGGCTAGATTTCAATGG
TTTCTATGCGGAACGCCTGGAACGTCTGTCTGCAGAAAGGAGTCAGAAAGCTGCCCCCCAAGTG
CCTGTCCCAAGGGGACCCCCAGCACCAGCATCCAGGGTGGCCATTCCTGCTCAATGAGCTTACT
TGTTAAATATCATATTTCTGGAACCTGGGTGTTATACGTTATTACTGCTTAAATATGGTATGAG
TTTCCA

hide sequence

RefSeq Acc Id:

XM_006230459 ⟹ XP_006230521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,220,725 - 204,247,309 (-)	NCBI
mRatBN7.2	1	194,791,179 - 194,817,654 (-)	NCBI
Rnor_6.0	1	212,333,740 - 212,359,243 (-)	NCBI
Rnor_5.0	1	219,251,911 - 219,277,442 (-)	NCBI

Sequence:

show sequence

TTGTGGCGGGAACCGGTCGGAGAAGGGCGGGGCTGGAGCCGGGCGCGGGATCCGGAACGCGAGC
CAGGCTGGCCTGCAGCGGTGAAGAGCCTGATTCTCTTGGGCCTCTGCCGCCGGCGGTCCGGTCT
ACCAGCCTGGGCTTGTCCCCAGCTCCACGTGCATGCAGTGTCCATGGAGACTAGAAGAGTATTG
GATCCCCTGGGATTGGAGTTTATAGATGGTTTCGAGCTACTACTATGTGGGAGCTAGGAACTGA
ATCCAGGTCCTCTGTAAGAGCAGCCGAATGCTCTTAACTGCTGAGCCATGCGTCCAGCCCCAAG
GAAAACATTGGTATGTTGGTGTCTCAGAGCTAAATTATGAGTGAATTTCGGATTCACCATGATG
TCAATGAGCTGCTCAGCCTGCTGCGTATCCATGGTGGGGACGGGGCTGAGGTCTACATTGACCT
GCTGCAGAAGAACCGGACACCATATGTTACGACAACAGTGTCTGCCCACAGTGCCAAGGTCAAA
ATTGCAGAGTTTTCTCGAACGCCTGAGGACTTTTTAAAGAAATATGATGAACTGAAATCTAAAA
ATACAAGGAACCTTGACCCACTGGTGTACCTGTTATCAAAACTCACAGAAGACAAAGAGACACT
TCAGTATTTGCAACAGAATGCAAAGGAAAGAGCTGAACTTGCAGCTAGTGCTGCAGCCAGCAGT
GCCACCGGTTTCAGCATCCCTGTTGCAGCCTCTAAGATGTCCACACAGGAGCTAGAGGAACTGA
GGAAGCAGCTTGGCAGTGTGGCTACAGGCTCCACACTGCAGCAGTCTCTGGAACTTACAAGAAA
GATGCTTCGAGACAAACAGAACAAAAAAAATTCAGGCCAGCCCCTCCCAGTCTTCCCAGCATGG
GTATATGAGAGACCAACACTGGCTGGAGATTTCCTGATTGGTTCGGGCTTGAGCTCAGACACAA
CTTTGCCTATAGGTACATTGCCCTTGGCCTCCCAGGAGTCAGCAGTGGTGGAAGATCTGCTCTA
TGTGCTTGTGGGAGTGGATGGCAGGTACATCACTGCTCAGCCTTTGGCTGGGAGGCAGAACCGT
ACCTTCCTTGTAGATCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTG
TGGCTGCCAGCTACTCTACTGTGACCAGGTTCATTGAGGAGAAGTCTTCATTTGAATATGGGCA
GGTGAACCATGCCTTGGCTGCTGCCATGAGAACCCTGGTGAAGGAATACCTGATTCTCGTCACA
CAACTGGAACAGCTACACAGGCAGGGCCTCCTCTCGCTGCAGAAGCTCTGGTTCTACATCCAGC
CAGCCATGCGTACCATTGACATCCTGGCCTCCCTTGCCACCTCCGTGGATAAAGGCGAGTGTGT
TGGCGGGTCGACGCTGAGCCTTCTCCATGATAGGAGCTTCAACTACACAGGGGACAGCCAGGCG
CAGGAGCTGTGCCTCTATCTGACCAAGGCGGCCAGCGCTCCTTACTTTGAGATCCTGGAGGAGT
GGATCTACAGAGGCGTCATTCACGACCCATACAGTGAGTTCATGGTGGAGGAGCACGAGCTGCG
GAAGGAGAAGATACAGGAGGACTACAATGACAAGTACTGGGACCAGCGCTACACTGTGCTGCCA
CAGCAGATCCCATCCTTCCTGCAGAAGGTAGCAGGCAAGATCCTCAGCACAGGAAAATACCTAA
ATGTGGTCAGAGAATGTGGTCATGATGTCACCTGTCCCGTAGCCAAAGAGATCATCTATACCCT
CAAAGAGCGGGCATATGTGGAGCAGATTGAGAAAGCGTTCAATTATGCCAGCAAAGTGCTGCTG
GACTTCCTCATGGAGGAGAAGGAGCTGGTGGCCCACCTGAGGTCCATCAAGCGCTACTTCCTGA
TGGACCAGGGGGACTTCTTTGTGCACTTCATGGACCTGACTGAGGAGGAGCTCAGGAAGCCAGT
AGAGGACATTACGCCCACACGCCTGGAGGCTCTGTTGGAGCTGGCCCTGAGAATGAGCACTGCC
AACACTGACCCCTTCAAAGACGACCTCAAGATTGACCTGATGCCTCACGACCTTATCACTCAGC
TTTTGCGGGTTCTGGCCATAGAGACCAAGCAAGAGAAGGCAATGACCCATGCTGACCCCACGGA
GCTCACTCTGAGTGGTCTCGAGGCTTTCTCCTTTGACTATATGGTCAAATGGCCCTTGTCACTG
ATTATTAACAGGAAGGCACTCACCCGCTACCAGATGCTCTTCCGACACATGTTCTACTGCAAGC
ACGTGGAGCGACAGCTCTGCAGTGTCTGGATCAGCAACAAGACAGCCAAGCAGCATGCGCTGCA
CTCCGCCAAGTGGTTTGCTGGTGCTTTCACGTTGCGGCAGCGAATGCTCAACTTCGTCCAGAAT
ATTCAGTACTACATGATGTTTGAAGTAATGGAACCGACCTGGCACATCCTTGAGAAAAACCTGA
AATCTGCCTCCAACATTGACGATGTCCTTGGCCACCACACAAGTTTCCTTGACAACTGCCTGAA
GGACTGCATGCTGACCAACCCTGAGCTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTGTGCGTC
ATGTTCACCAACTGTATGCAGAAATTTACACAGAGTATGAAACTGGACAGTGAACTAGGCCGTC
TGACACTGGATCAGGGTAGTGTGCAGGGGCCACCCCCAGAGAGTGAGCGGATTGATGATCGTCC
CCGGAAGGAGCCTACCAGGAAGCACCTGCCTGAGCATGTGGACACTCCTCAGCTGTCCTCCGGC
TTCGAGGCCACCATCAACAACTTTGACAAAAACTTCTCTGCCCATCTTCTTGATTTGCTGGCCC
GACTAAGTGTCTACAGCACCAGTGACTGTGAACACGGCATGGCCAGTGTCATCTCCAGGCTAGA
TTTCAATGGTTTCTATGCGGAACGCCTGGAACGTCTGTCTGCAGAAAGGAGTCAGAAAGCTGCC
CCCCAAGTGCCTGTCCCAAGGGGACCCCCAGCACCAGCATCCAGGGTGGCCATTCCTGCTCAAT
GAGCTTACTTGTTAAATATCATATTTCTGGAACCTGGGTGTTATACGTTATTACTGCTTAAATA
TGGTATGAGTTTCCA

hide sequence

RefSeq Acc Id:

XM_006230460 ⟹ XP_006230522

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,220,725 - 204,247,458 (-)	NCBI
mRatBN7.2	1	194,791,179 - 194,817,807 (-)	NCBI
Rnor_6.0	1	212,333,740 - 212,359,345 (-)	NCBI
Rnor_5.0	1	219,251,911 - 219,277,442 (-)	NCBI

Sequence:

show sequence

ACCGTCGGAGGGGTGGTGACGGACGTGACGTCTATTAACTTCCTGTGGCGACCCTGCGGGGCGG
GACGCGACGCGCGGAGTGCATGCAGTGTCCATGGAGACTAGAAGAGTATTGGATCCCCTGGGAT
TGGAGTTTATAGATGGTTTCGAGCTACTACTATGTGGGAGCTAGGAACTGAATCCAGGTCCTCT
GTAAGAGCAGCCGAATGCTCTTAACTGCTGAGCCATGCGTCCAGCCCCAAGGAAAACATTGGTA
TGTTGGTGTCTCAGAGCTAAATTATGAGTGAATTTCGGATTCACCATGATGTCAATGAGCTGCT
CAGCCTGCTGCGTATCCATGGTGGGGACGGGGCTGAGGTCTACATTGACCTGCTGCAGAAGAAC
CGGACACCATATGTTACGACAACAGTGTCTGCCCACAGTGCCAAGGTCAAAATTGCAGAGTTTT
CTCGAACGCCTGAGGACTTTTTAAAGAAATATGATGAACTGAAATCTAAAAATACAAGGAACCT
TGACCCACTGGTGTACCTGTTATCAAAACTCACAGAAGACAAAGAGACACTTCAGTATTTGCAA
CAGAATGCAAAGGAAAGAGCTGAACTTGCAGCTAGTGCTGCAGCCAGCAGTGCCACCGGTTTCA
GCATCCCTGTTGCAGCCTCTAAGATGTCCACACAGGAGCTAGAGGAACTGAGGAAGCAGCTTGG
CAGTGTGGCTACAGGCTCCACACTGCAGCAGTCTCTGGAACTTACAAGAAAGATGCTTCGAGAC
AAACAGAACAAAAAAAATTCAGGCCAGCCCCTCCCAGTCTTCCCAGCATGGGTATATGAGAGAC
CAACACTGGCTGGAGATTTCCTGATTGGTTCGGGCTTGAGCTCAGACACAACTTTGCCTATAGG
TACATTGCCCTTGGCCTCCCAGGAGTCAGCAGTGGTGGAAGATCTGCTCTATGTGCTTGTGGGA
GTGGATGGCAGGTACATCACTGCTCAGCCTTTGGCTGGGAGGCAGAACCGTACCTTCCTTGTAG
ATCCCAACCTGGACCTGTCCATCCGGGAGCTAGTAAACAGAATCCTCCCTGTGGCTGCCAGCTA
CTCTACTGTGACCAGGTTCATTGAGGAGAAGTCTTCATTTGAATATGGGCAGGTGAACCATGCC
TTGGCTGCTGCCATGAGAACCCTGGTGAAGGAATACCTGATTCTCGTCACACAACTGGAACAGC
TACACAGGCAGGGCCTCCTCTCGCTGCAGAAGCTCTGGTTCTACATCCAGCCAGCCATGCGTAC
CATTGACATCCTGGCCTCCCTTGCCACCTCCGTGGATAAAGGCGAGTGTGTTGGCGGGTCGACG
CTGAGCCTTCTCCATGATAGGAGCTTCAACTACACAGGGGACAGCCAGGCGCAGGAGCTGTGCC
TCTATCTGACCAAGGCGGCCAGCGCTCCTTACTTTGAGATCCTGGAGGAGTGGATCTACAGAGG
CGTCATTCACGACCCATACAGTGAGTTCATGGTGGAGGAGCACGAGCTGCGGAAGGAGAAGATA
CAGGAGGACTACAATGACAAGTACTGGGACCAGCGCTACACTGTGCTGCCACAGCAGATCCCAT
CCTTCCTGCAGAAGGTAGCAGGCAAGATCCTCAGCACAGGAAAATACCTAAATGTGGTCAGAGA
ATGTGGTCATGATGTCACCTGTCCCGTAGCCAAAGAGATCATCTATACCCTCAAAGAGCGGGCA
TATGTGGAGCAGATTGAGAAAGCGTTCAATTATGCCAGCAAAGTGCTGCTGGACTTCCTCATGG
AGGAGAAGGAGCTGGTGGCCCACCTGAGGTCCATCAAGCGCTACTTCCTGATGGACCAGGGGGA
CTTCTTTGTGCACTTCATGGACCTGACTGAGGAGGAGCTCAGGAAGCCAGTAGAGGACATTACG
CCCACACGCCTGGAGGCTCTGTTGGAGCTGGCCCTGAGAATGAGCACTGCCAACACTGACCCCT
TCAAAGACGACCTCAAGATTGACCTGATGCCTCACGACCTTATCACTCAGCTTTTGCGGGTTCT
GGCCATAGAGACCAAGCAAGAGAAGGCAATGACCCATGCTGACCCCACGGAGCTCACTCTGAGT
GGTCTCGAGGCTTTCTCCTTTGACTATATGGTCAAATGGCCCTTGTCACTGATTATTAACAGGA
AGGCACTCACCCGCTACCAGATGCTCTTCCGACACATGTTCTACTGCAAGCACGTGGAGCGACA
GCTCTGCAGTGTCTGGATCAGCAACAAGACAGCCAAGCAGCATGCGCTGCACTCCGCCAAGTGG
TTTGCTGGTGCTTTCACGTTGCGGCAGCGAATGCTCAACTTCGTCCAGAATATTCAGTACTACA
TGATGTTTGAAGTAATGGAACCGACCTGGCACATCCTTGAGAAAAACCTGAAATCTGCCTCCAA
CATTGACGATGTCCTTGGCCACCACACAAGTTTCCTTGACAACTGCCTGAAGGACTGCATGCTG
ACCAACCCTGAGCTGCTGAAGGTTTTCTCCAAGCTCATGTCCGTGTGCGTCATGTTCACCAACT
GTATGCAGAAATTTACACAGAGTATGAAACTGGACAGTGAACTAGGCCGTCTGACACTGGATCA
GGGTAGTGTGCAGGGGCCACCCCCAGAGAGTGAGCGGATTGATGATCGTCCCCGGAAGGAGCCT
ACCAGGAAGCACCTGCCTGAGCATGTGGACACTCCTCAGCTGTCCTCCGGCTTCGAGGCCACCA
TCAACAACTTTGACAAAAACTTCTCTGCCCATCTTCTTGATTTGCTGGCCCGACTAAGTGTCTA
CAGCACCAGTGACTGTGAACACGGCATGGCCAGTGTCATCTCCAGGCTAGATTTCAATGGTTTC
TATGCGGAACGCCTGGAACGTCTGTCTGCAGAAAGGAGTCAGAAAGCTGCCCCCCAAGTGCCTG
TCCCAAGGGGACCCCCAGCACCAGCATCCAGGGTGGCCATTCCTGCTCAATGAGCTTACTTGTT
AAATATCATATTTCTGGAACCTGGGTGTTATACGTTATTACTGCTTAAATATGGTATGAGTTTC
CA

hide sequence

RefSeq Acc Id:

XM_039078900 ⟹ XP_038934828

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,220,725 - 204,239,880 (-)	NCBI
mRatBN7.2	1	194,791,179 - 194,810,235 (-)	NCBI

RefSeq Acc Id:

XM_063263839 ⟹ XP_063119909

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,220,725 - 204,247,460 (-)	NCBI

RefSeq Acc Id:

XM_063263843 ⟹ XP_063119913

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,221,795 - 204,247,458 (-)	NCBI

RefSeq Acc Id:

XR_010053003

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	204,220,725 - 204,247,460 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101030	(Get FASTA)	NCBI Sequence Viewer
	XP_006230519	(Get FASTA)	NCBI Sequence Viewer
	XP_006230520	(Get FASTA)	NCBI Sequence Viewer
	XP_006230521	(Get FASTA)	NCBI Sequence Viewer
	XP_006230522	(Get FASTA)	NCBI Sequence Viewer
	XP_038934828	(Get FASTA)	NCBI Sequence Viewer
	XP_063119909	(Get FASTA)	NCBI Sequence Viewer
	XP_063119913	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI66857	(Get FASTA)	NCBI Sequence Viewer
	EDM11867	(Get FASTA)	NCBI Sequence Viewer
	EDM11868	(Get FASTA)	NCBI Sequence Viewer
	EDM11869	(Get FASTA)	NCBI Sequence Viewer
	EDM11870	(Get FASTA)	NCBI Sequence Viewer
	EDM11871	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024573.3
	ENSRNOP00000096948.1

RefSeq Acc Id:

NP_001101030 ⟸ NM_001107560

- UniProtKB:

B2RYP8 (UniProtKB/TrEMBL), A6HXD6 (UniProtKB/TrEMBL), A0A8I6B530 (UniProtKB/TrEMBL), F7EQB3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSEFRIHHDVNELLSLLRIHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTPEDFL
KKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAKERAELAASAAASSATGFSIPVAASK
MSTQELEELRKQLGSVATGSTLQQSLELTRKMLRDKQNKKNSGQPLPVFPAWVYERPTLAGDFL
IGSGLSSDTTLPIGTLPLASQESAVVEDLLYVLVGVDGRYITAQPLAGRQNRTFLVDPNLDLSI
RELVNRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEYLILVTQLEQLHRQGLLS
LQKLWFYIQPAMRTIDILASLATSVDKGECVGGSTLSLLHDRSFNYTGDSQAQELCLYLTKAAS
APYFEILEEWIYRGVIHDPYSEFMVEEHELRKEKIQEDYNDKYWDQRYTVLPQQIPSFLQKVAG
KILSTGKYLNVVRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAH
LRSIKRYFLMDQGDFFVHFMDLTEEELRKPVEDITPTRLEALLELALRMSTANTDPFKDDLKID
LMPHDLITQLLRVLAIETKQEKAMTHADPTELTLSGLEAFSFDYMVKWPLSLIINRKALTRYQM
LFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEP
TWHILEKNLKSASNIDDVLGHHTSFLDNCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS
MKLDSELGRLTLDQGSVQGPPPESERIDDRPRKEPTRKHLPEHVDTPQLSSGFEATINNFDKNF
SAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYAERLERLSAERSQKAAPQVPVPRGPPAP
ASRVAIPAQ

hide sequence

RefSeq Acc Id:	XP_006230519 ⟸ XM_006230457
- Peptide Label:	isoform X1
- UniProtKB:	B2RYP8 (UniProtKB/TrEMBL), A6HXD6 (UniProtKB/TrEMBL), A0A8I6B530 (UniProtKB/TrEMBL), F7EQB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEFRIHHDVNELLSLLRIHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTPEDFL KKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAKERAELAASAAASSATGFSIPVAASK MSTQELEELRKQLGSVATGSTLQQSLELTRKMLRDKQNKKNSGQPLPVFPAWVYERPTLAGDFL IGSGLSSDTTLPIGTLPLASQESAVVEDLLYVLVGVDGRYITAQPLAGRQNRTFLVDPNLDLSI RELVNRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEYLILVTQLEQLHRQGLLS LQKLWFYIQPAMRTIDILASLATSVDKGECVGGSTLSLLHDRSFNYTGDSQAQELCLYLTKAAS APYFEILEEWIYRGVIHDPYSEFMVEEHELRKEKIQEDYNDKYWDQRYTVLPQQIPSFLQKVAG KILSTGKYLNVVRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAH LRSIKRYFLMDQGDFFVHFMDLTEEELRKPVEDITPTRLEALLELALRMSTANTDPFKDDLKID LMPHDLITQLLRVLAIETKQEKAMTHADPTELTLSGLEAFSFDYMVKWPLSLIINRKALTRYQM LFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEP TWHILEKNLKSASNIDDVLGHHTSFLDNCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS MKLDSELGRLTLDQGSVQGPPPESERIDDRPRKEPTRKHLPEHVDTPQLSSGFEATINNFDKNF SAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYAERLERLSAERSQKAAPQVPVPRGPPAP ASRVAIPAQ hide sequence

RefSeq Acc Id:	XP_006230522 ⟸ XM_006230460
- Peptide Label:	isoform X1
- UniProtKB:	B2RYP8 (UniProtKB/TrEMBL), A6HXD6 (UniProtKB/TrEMBL), A0A8I6B530 (UniProtKB/TrEMBL), F7EQB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEFRIHHDVNELLSLLRIHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTPEDFL KKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAKERAELAASAAASSATGFSIPVAASK MSTQELEELRKQLGSVATGSTLQQSLELTRKMLRDKQNKKNSGQPLPVFPAWVYERPTLAGDFL IGSGLSSDTTLPIGTLPLASQESAVVEDLLYVLVGVDGRYITAQPLAGRQNRTFLVDPNLDLSI RELVNRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEYLILVTQLEQLHRQGLLS LQKLWFYIQPAMRTIDILASLATSVDKGECVGGSTLSLLHDRSFNYTGDSQAQELCLYLTKAAS APYFEILEEWIYRGVIHDPYSEFMVEEHELRKEKIQEDYNDKYWDQRYTVLPQQIPSFLQKVAG KILSTGKYLNVVRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAH LRSIKRYFLMDQGDFFVHFMDLTEEELRKPVEDITPTRLEALLELALRMSTANTDPFKDDLKID LMPHDLITQLLRVLAIETKQEKAMTHADPTELTLSGLEAFSFDYMVKWPLSLIINRKALTRYQM LFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEP TWHILEKNLKSASNIDDVLGHHTSFLDNCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS MKLDSELGRLTLDQGSVQGPPPESERIDDRPRKEPTRKHLPEHVDTPQLSSGFEATINNFDKNF SAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYAERLERLSAERSQKAAPQVPVPRGPPAP ASRVAIPAQ hide sequence

RefSeq Acc Id:	XP_006230520 ⟸ XM_006230458
- Peptide Label:	isoform X1
- UniProtKB:	B2RYP8 (UniProtKB/TrEMBL), A6HXD6 (UniProtKB/TrEMBL), A0A8I6B530 (UniProtKB/TrEMBL), F7EQB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEFRIHHDVNELLSLLRIHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTPEDFL KKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAKERAELAASAAASSATGFSIPVAASK MSTQELEELRKQLGSVATGSTLQQSLELTRKMLRDKQNKKNSGQPLPVFPAWVYERPTLAGDFL IGSGLSSDTTLPIGTLPLASQESAVVEDLLYVLVGVDGRYITAQPLAGRQNRTFLVDPNLDLSI RELVNRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEYLILVTQLEQLHRQGLLS LQKLWFYIQPAMRTIDILASLATSVDKGECVGGSTLSLLHDRSFNYTGDSQAQELCLYLTKAAS APYFEILEEWIYRGVIHDPYSEFMVEEHELRKEKIQEDYNDKYWDQRYTVLPQQIPSFLQKVAG KILSTGKYLNVVRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAH LRSIKRYFLMDQGDFFVHFMDLTEEELRKPVEDITPTRLEALLELALRMSTANTDPFKDDLKID LMPHDLITQLLRVLAIETKQEKAMTHADPTELTLSGLEAFSFDYMVKWPLSLIINRKALTRYQM LFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEP TWHILEKNLKSASNIDDVLGHHTSFLDNCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS MKLDSELGRLTLDQGSVQGPPPESERIDDRPRKEPTRKHLPEHVDTPQLSSGFEATINNFDKNF SAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYAERLERLSAERSQKAAPQVPVPRGPPAP ASRVAIPAQ hide sequence

RefSeq Acc Id:	XP_006230521 ⟸ XM_006230459
- Peptide Label:	isoform X1
- UniProtKB:	B2RYP8 (UniProtKB/TrEMBL), A6HXD6 (UniProtKB/TrEMBL), A0A8I6B530 (UniProtKB/TrEMBL), F7EQB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEFRIHHDVNELLSLLRIHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTPEDFL KKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAKERAELAASAAASSATGFSIPVAASK MSTQELEELRKQLGSVATGSTLQQSLELTRKMLRDKQNKKNSGQPLPVFPAWVYERPTLAGDFL IGSGLSSDTTLPIGTLPLASQESAVVEDLLYVLVGVDGRYITAQPLAGRQNRTFLVDPNLDLSI RELVNRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLVKEYLILVTQLEQLHRQGLLS LQKLWFYIQPAMRTIDILASLATSVDKGECVGGSTLSLLHDRSFNYTGDSQAQELCLYLTKAAS APYFEILEEWIYRGVIHDPYSEFMVEEHELRKEKIQEDYNDKYWDQRYTVLPQQIPSFLQKVAG KILSTGKYLNVVRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAH LRSIKRYFLMDQGDFFVHFMDLTEEELRKPVEDITPTRLEALLELALRMSTANTDPFKDDLKID LMPHDLITQLLRVLAIETKQEKAMTHADPTELTLSGLEAFSFDYMVKWPLSLIINRKALTRYQM LFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEP TWHILEKNLKSASNIDDVLGHHTSFLDNCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQS MKLDSELGRLTLDQGSVQGPPPESERIDDRPRKEPTRKHLPEHVDTPQLSSGFEATINNFDKNF SAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYAERLERLSAERSQKAAPQVPVPRGPPAP ASRVAIPAQ hide sequence

Ensembl Acc Id:

ENSRNOP00000024573 ⟸ ENSRNOT00000024573

RefSeq Acc Id:	XP_038934828 ⟸ XM_039078900
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000096948 ⟸ ENSRNOT00000105932

RefSeq Acc Id:	XP_063119909 ⟸ XM_063263839
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6B530 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119913 ⟸ XM_063263843
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6B530 (UniProtKB/TrEMBL)

Protein Domains

Gamma tubulin complex component C-terminal Gamma tubulin complex component protein N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B2RYP8-F1-model_v2	AlphaFold	B2RYP8	1-905	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309597	AgrOrtholog
BioCyc Gene	G2FUF-57069	BioCyc
Ensembl Genes	ENSRNOG00000018137	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000024573.5	UniProtKB/TrEMBL
	ENSRNOT00000105932.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.120.1900	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:9100036	IMAGE-MGC_LOAD
InterPro	GCP_C	UniProtKB/TrEMBL
	GCP_C_sf	UniProtKB/TrEMBL
	GCP_N	UniProtKB/TrEMBL
	Spc97_Spc98	UniProtKB/TrEMBL
KEGG Report	rno:309098	UniProtKB/TrEMBL
MGC_CLONE	MGC:188764	IMAGE-MGC_LOAD
NCBI Gene	309098	ENTREZGENE
PANTHER	GAMMA-TUBULIN COMPLEX COMPONENT 2	UniProtKB/TrEMBL
	Spc97_Spc98	UniProtKB/TrEMBL
Pfam	GCP_C_terminal	UniProtKB/TrEMBL
	GCP_N_terminal	UniProtKB/TrEMBL
PhenoGen	Tubgcp2	PhenoGen
RatGTEx	ENSRNOG00000018137	RatGTEx
UniProt	A0A8I6B530	ENTREZGENE, UniProtKB/TrEMBL
	A6HXD6	ENTREZGENE, UniProtKB/TrEMBL
	B2RYP8	ENTREZGENE
	F7EQB3	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	B2RYP8	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-06-22	Tubgcp2	tubulin gamma complex component 2	Tubgcp2	tubulin, gamma complex associated protein 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-26	Tubgcp2	tubulin, gamma complex associated protein 2	Adam8_predicted	a disintegrin and metalloprotease domain 8 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Adam8_predicted	a disintegrin and metalloprotease domain 8 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM