Tcas2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Tcas2 (Tongue tumor susceptibility QTL 2) Rattus norvegicus

Symbol: Tcas2
Name: Tongue tumor susceptibility QTL 2
RGD ID: 631260
Also known as: Tscc3; Tongue squamous cell carcinoma QTL 3; Tts2
Trait: tongue integrity trait   (VT:0010553)    
Measurement Type: number of squamous cell tumors of the tongue with diameter greater than 3 mm   (CMO:0001950)    
LOD Score: 4.93
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21192,485,903 - 199,050,587RGD_MAPPER_PIPELINE
Rnor_6.01210,019,247 - 217,054,418RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01216,945,382 - 223,910,677RGDRnor5.0
RGSC_v3.41197,423,292 - 204,280,406RGDRGSC3.4
RGSC_v3.11197,573,284 - 204,433,956RGD
Cross Type: intercross
Strains Crossed: DA WF 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
DA  (IEA)
WF  (IEA)

References

References - curated
1. Tanuma J, etal., Int J Cancer 2002 Dec 20;102(6):638-42.
2. Tanuma JI, etal., Jpn J Cancer Res 2001 Jun;92(6):610-6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3643Sctsecretin1214264865214277437Rat
2775H19H19, imprinted maternally expressed transcript (non-protein coding)1215744404215747080Rat
69332Ifitm2interferon induced transmembrane protein 21213750219213751399Rat
71015Ap2a2adaptor related protein complex 2 subunit alpha 21214534217214607497Rat
2870Igf2insulin-like growth factor 21215828102215839081Rat
69330Echs1enoyl-CoA hydratase, short chain 11212570213212579040Rat
2827HrasHRas proto-oncogene, GTPase1214178404214181841Rat
61876Prap1proline-rich acidic protein 11212558257212562053Rat
3123Muc2mucin 2, oligomeric mucus/gel-forming1214663929214693197Rat
2386Cox8bcytochrome c oxidase, subunit VIIIb1213648787213650247Rat
2315Cd81Cd81 molecule1216237663216253460Rat
71051Bet1lBet1 golgi vesicular membrane trafficking protein-like1213602836213606507Rat
3853Thtyrosine hydroxylase1216073034216080287Rat
628826Muc6mucin 6, oligomeric mucus/gel-forming1214608453214630524Rat
727837Olr287olfactory receptor 2871212622559212654453Rat
621503Kcnq1potassium voltage-gated channel subfamily Q member 11216293087216630339Rat
68343Mrpl23mitochondrial ribosomal protein L231215701544215709313Rat
2522Drd4dopamine receptor D41214278296214282818Rat
620932Msx3msh homeobox 31212514223212517151Rat
621398Rnh1ribonuclease/angiogenin inhibitor 11214151341214163807Rat
62001Muc5acmucin 5AC, oligomeric mucus/gel-forming1214725482214756653Rat
621511Ctsdcathepsin D1215541570215553446Rat
621719Calycalcyon neuron-specific vesicular protein1212537851212549040Rat
2916Ins2insulin 21215856967215858034Rat
68399Syt8synaptotagmin 81215605408215607602Rat
619839Cttncortactin1215255385215290882Rat
708549Nlrp6NLR family, pyrin domain containing 61213676954213683114Rat
620671Deaf1DEAF1 transcription factor1214283787214317466Rat
621769Dhcr77-dehydrocholesterol reductase1217018916217034890Rat
727892Cdkn1ccyclin-dependent kinase inhibitor 1C1216661067216663791Rat
62050Tnni2troponin I2, fast skeletal type1215609110215611652Rat
1304836Gatd1glutamine amidotransferase class 1 domain containing 11214389006214394451Rat
3883Tnnt3troponin T3, fast skeletal type1215666628215683628Rat
621290Cd151CD151 molecule (Raph blood group)1214446659214450668Rat
620800Bnip3BCL2 interacting protein 31211248098211265282Rat
621775Rplp2ribosomal protein lateral stalk subunit P21214428280214430551Rat
620674Taldo1transaldolase 11214375555214385886Rat
2475Cyp2e1cytochrome P450, family 2, subfamily e, polypeptide 11213511892213522195Rat
727801Nadsyn1NAD synthetase 11216985710217013743Rat
620504Cdhr5cadherin-related family member 51214255118214263848Rat
1306015Pgghgprotein-glucosylgalactosylhydroxylysine glucosidase1213734198213743233Rat
1306133Lsp1lymphocyte-specific protein 11215628750215662505Rat
1304718Ifitm6interferon induced transmembrane protein 61213816966213856570Rat
1305864Stk32cserine/threonine kinase 32C1211440335211520699Rat
1306425Dusp8dual specificity phosphatase 81215030429215043111Rat
1307601Ifitm1interferon induced transmembrane protein 11213765825213767841Rat
1305810Tspan4tetraspanin 41214454090214473789Rat
1304755Phlda2pleckstrin homology-like domain, family A, member 21216701345216704479Rat
1306732Sigirrsingle Ig and TIR domain containing1213898395213907697Rat
2159Ascl2achaete-scute family bHLH transcription factor 21216154002216156409Rat
738044MrgprgMAS related GPR family member G1216952942216955673Rat
738045MrgpreMAS related GPR family member E1216969464216973936Rat
1307378Scart1scavenger receptor family member expressed on T-cells 11212695735212706986Rat
1310028Odf3outer dense fiber of sperm tails 31213596784213602417Rat
1305391Nap1l4nucleosome assembly protein 1-like 41216715352216751742Rat
1307043Tssc4tumor suppressing subtransferable candidate 41216253786216256610Rat
1307439Lmntd2lamin tail domain containing 21214197126214202828Rat
708360Phrf1PHD and ring finger domains 11214215673214248906Rat
2409Dpysl4dihydropyrimidinase-like 41211423022211438533Rat
1304676Tolliptoll interacting protein1214823993214844861Rat
1333372Olr306olfactory receptor 3061213194827213195759Rat
1333828Olr299olfactory receptor 2991213011278213012207Rat
1309133Pkp3plakophilin 31213884795213897783Rat
1308399Tmem80transmembrane protein 801214317300214326293Rat
1307280Nkx6-2NK6 homeobox 21211922389211923929Rat
1560565Ano9anoctamin 91213908389213929291Rat
1333923Olr300olfactory receptor 3001213010414213042351Rat
1333513Olr310olfactory receptor 3101213347974213348906Rat
1308402Osbpl5oxysterol binding protein-like 51216866263216920625Rat
1333199Olr297olfactory receptor 2971212940364212941287Rat
1333205Olr312olfactory receptor 3121213404400213405335Rat
1333083Olr290-psolfactory receptor pseudogene 2901212864102212864549Rat
1332644Olr302olfactory receptor 3021213070528213071460Rat
1333185Olr292olfactory receptor 2921212714092212886388Rat
1309693Tnfrsf26tumor necrosis factor receptor superfamily, member 261216808642216829361Rat
1334051Olr298olfactory receptor 2981212990747212991658Rat
1333358Olr288olfactory receptor 2881212678646212679602Rat
1333221Olr286olfactory receptor 2861212632366212633304Rat
1310747Carscysteinyl-tRNA synthetase1216759367216801652Rat
1309044Pnpla2patatin-like phospholipase domain containing 21214434638214439720Rat
1333614Olr301-psolfactory receptor pseudogene 3011213043597213044252Rat
1332754Olr311olfactory receptor 3111213374895213375827Rat
1308374Sirt3sirtuin 31213613502213636061Rat
1310912Eps8l2EPS8-like 21214327992214353466Rat
1307914Ptdss2phosphatidylserine synthase 21214122981214148011Rat
1333353Olr315olfactory receptor 3151213451721213452653Rat
1311654Lrrc56leucine rich repeat containing 561214182232214197184Rat
1306168Inpp5ainositol polyphosphate-5-phosphatase A1211732163211920844Rat
1305236Psmd13proteasome 26S subunit, non-ATPase 131213636159213648499Rat
1310620Trpm5transient receptor potential cation channel, subfamily M, member 51216256653216281504Rat
1308721Tspan32tetraspanin 321216189535216206202Rat
1309401Cend1cell cycle exit and neuronal differentiation 11214407072214410069Rat
1306244Rassf7Ras association domain family member 71214202722214205799Rat
1307826Slc25a22solute carrier family 25 member 221214410388214418236Rat
1307828Irf7interferon regulatory factor 71214249388214252909Rat
1308241Adgra1adhesion G protein-coupled receptor A11212170190212213156Rat
708356Ppp2r2dprotein phosphatase 2, regulatory subunit B, delta1211205903211240216Rat
1307177Jakmip3janus kinase and microtubule interacting protein 31211292604211421023Rat
1307108Pwwp2bPWWP domain containing 2B1211579706211600715Rat
1309350RGD1309350similar to transthyretin (4L369)1213577202213580598Rat
1333124Olr305olfactory receptor 3051213169484213170416Rat
1333429Olr294-psolfactory receptor pseudogene 2941212904924212905685Rat
1308955Chid1chitinase domain containing 11214476418214511569Rat
1307900Ifitm5interferon induced transmembrane protein 51213743331213749879Rat
1308585Zfp511zinc finger protein 5111212359293212363698Rat
1309597Tubgcp2tubulin, gamma complex associated protein 21212333740212359352Rat
1310052B4galnt4beta-1,4-N-acetyl-galactosaminyl transferase 41213870328213881233Rat
1333577Olr295olfactory receptor 2951212911267212912199Rat
1561432Scgb1c1secretoglobin, family 1C, member 11213595240213596459Rat
1563319Ifitm10interferon induced transmembrane protein 101215521604215538283Rat
1562011RGD1562011similar to MAS-related G-protein coupled receptor, member G1216941913216942791Rat
1561983Muc5bmucin 5B, oligomeric mucus/gel-forming1214778459214811237Rat
1560911Cracr2bcalcium release activated channel regulator 2B1214439810214445876Rat
1561125Paoxpolyamine oxidase1212578444212603722Rat
1561845Sprnshadow of prion protein1212619817212623686Rat
1562983Mob2MOB kinase activator 21214953992214962106Rat
1334251Olr309olfactory receptor 3091213334956213335888Rat
1333730Olr303olfactory receptor 3031213094521213095444Rat
1333778Olr293-psolfactory receptor pseudogene 2931212896522212896755Rat
727957Ric8aRIC8 guanine nucleotide exchange factor A1213606599213612905Rat
1559853Syce1synaptonemal complex central element protein 11213523638213534641Rat
1334140Olr296-psolfactory receptor pseudogene 2961212936320212936647Rat
1334099Olr313olfactory receptor 3131213426844213427779Rat
1559981Lrrc27leucine rich repeat containing 271211543751211575823Rat
1311186Fuomfucose mutarotase1212563714212568224Rat
1334329Olr314-psolfactory receptor pseudogene 3141213438508213438854Rat
1334216Olr307olfactory receptor 3071213258532213259616Rat
1333032Olr308olfactory receptor 3081213287512213288444Rat
1332957Olr304olfactory receptor 3041213131630213132562Rat
1311792Pidd1p53-induced death domain protein 11214418751214423959Rat
1303323Slc22a18solute carrier family 22, member 181216676330216700632Rat
1333302Olr289olfactory receptor 2891212836278212837207Rat
1559985Cfap46cilia and flagella associated protein 461211943436212022287Rat
1566256Brsk2BR serine/threonine kinase 21214918757214940883Rat
1565431Mapk1ip1mitogen-activated protein kinase 1 interacting protein 11211195440211205772Rat
1566394Adam8ADAM metallopeptidase domain 81212317510212332895Rat
1586688Tnfrsf22tumor necrosis factor receptor superfamily, member 221216845789216859606Rat
1562437Tcerg1ltranscription elongation regulator 1-like1210550668210739600Rat
1585882LOC680907similar to scavenger receptor cysteine-rich type 1 protein M160 precursor1212714092212810823Rat
1559948RGD1559948hypothetical gene supported by X517061213562687213570072Rat
1566209Polr2lRNA polymerase II, I and III subunit L1214451966214453974Rat
1565261Kndc1kinase non-catalytic C-lobe domain containing 11212229751212279254Rat
1588225LOC680741similar to 5-nucleotidase, cytosolic III1212507717212508616Rat
1598059LOC681212similar to transmembrane protein 491213544837213546511Rat
1592604LOC685544hypothetical protein LOC6855441215460226215460918Rat
1589375Utf1undifferentiated embryonic cell transcription factor 11212281237212282363Rat
1592568Prr33proline rich 331215658996215666512Rat
1595844Ifitm3interferon induced transmembrane protein 31213810712213811821Rat
2314879Mir483microRNA 4831215832088215832160Rat
2314883Mir675microRNA 6751215745981215746064Rat
2314887Mir210microRNA 2101214208355214208464Rat
2320863LOC100361097potassium channel tetramerization domain containing 18-like1215148974215150129Rat
2321900LOC100360557olfactory receptor 525-like1212871638212872615Rat
4888587Mir3574microRNA 35741214208349214208466Rat
2325486Mir202microRNA 2021212295630212295701Rat
6501977LOC100909737uncharacterized LOC1009097371215838112215844406Rat
6497155Mtg1mitochondrial ribosome-associated GTPase 11212606753212619493Rat
7506405LOC102552318actin-like1217039727217066768Rat
7509269LOC10255410760S ribosomal protein L36-like1212345186212347943Rat
7498653LOC102552864uncharacterized LOC1025528641210117734210135187Rat
7646072LOC102553731uncharacterized LOC1025537311212287185212290700Rat
7638496LOC102553651uncharacterized LOC1025536511211709700211716884Rat
7577477LOC102550186uncharacterized LOC1025501861216230707216236566Rat
7556971LOC102552971uncharacterized LOC1025529711213932320213934615Rat
7603068LOC102555474uncharacterized LOC1025554741213723979213730939Rat
7552934LOC102546801uncharacterized LOC1025468011215589018215601471Rat
7585225LOC102549750uncharacterized LOC1025497501215881009215939811Rat
7553817LOC102553541uncharacterized LOC1025535411211271431211277625Rat
7692070LOC102549151uncharacterized LOC1025491511216178799216184565Rat
7684888LOC102551319uncharacterized LOC1025513191212520528212533155Rat
7669488LOC102548505uncharacterized LOC1025485051215753880215801652Rat
7670186LOC102553043uncharacterized LOC1025530431214207410214208832Rat
7672242LOC102547298uncharacterized LOC1025472981215722314215727978Rat
7746010LOC102552034keratin-associated protein 5-1-like1215411343215412911Rat
7711326LOC102548568vegetative cell wall protein gp1-like1215844598215847533Rat
7730578LOC102547221uncharacterized LOC1025472211215747162215753871Rat
9183363LOC103691260uncharacterized LOC1036912601211751602211756172Rat
9199369LOC103691259uncharacterized LOC1036912591211797485211803820Rat
9271178LOC103691261sperm flagellar protein 1-like1212309940212317411Rat
9278179Krtap5-1keratin associated protein 5-11215126994215127583Rat
9386227LOC103691264keratin-associated protein 5-2-like1215108732215110228Rat
9254028LOC103691269keratin-associated protein 5-4-like1215135672215136360Rat
9294659LOC103691262uncharacterized LOC1036912621213527159213536336Rat
9257184LOC10369126628S ribosomal protein L42, mitochondrial pseudogene1212743305212747051Rat
9466175LOC103691268keratin-associated protein 5-1-like1215044012215104614Rat
9330749LOC103691258uncharacterized LOC1036912581211620163211631355Rat
9392678LOC103690037NACHT, LRR and PYD domains-containing protein 6-like1213676328213683616Rat
9445960LOC103691270uncharacterized LOC1036912701216934099216936936Rat
9453410LOC10369126360S ribosomal protein L9 pseudogene1213562687213563415Rat
11434698LOC108349663uncharacterized LOC1083496631210110420210169740Rat
11457308LOC108349668protein transport protein Sec61 subunit gamma pseudogene1213583170213583589Rat
11458759LOC108349666uncharacterized LOC1083496661212081046212089711Rat
11453343LOC108349664uncharacterized LOC1083496641210389039210393441Rat
11406967LOC108349665uncharacterized LOC1083496651211287575211292324Rat
11414402LOC108349672uncharacterized LOC1083496721215219721215223660Rat
11426275LOC108349667uncharacterized LOC1083496671212059793212074373Rat
11427717LOC108349669uncharacterized LOC1083496691213745544213750266Rat
11378084LOC108349673uncharacterized LOC1083496731215986859215989549Rat
11391312LOC108349862serine/arginine-rich splicing factor 3 pseudogene1213051662213053160Rat
11381986LOC108349670uncharacterized LOC1083496701215380445215382181Rat
11501302LOC108349787uncharacterized LOC1083497871215426867215430569Rat
11497852LOC108348748small EDRK-rich factor 2 pseudogene1213862067213862247Rat
11511414LOC108349786keratin-associated protein 5-4-like1215126631215174718Rat
11482314LOC10834978560S ribosomal protein L37a-like1212300542212301094Rat
11491806LOC108349671keratin-associated protein 5-2-like1215329194215330279Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34326D1Mgh211501210019247210019418Ratregion
1638653D1Got3391131210020359210020466Ratregion
42523D1Rat4422411210193125210193401Ratregion
38650D1Rat1652131210267015210267215Ratregion
37294D1Rat1331621210360618210360774Ratregion
62487D1Uia61371210524594210524726Ratregion
38570D1Rat2402411210652654210652873Ratregion
37120D1Rat1281121210672154210672263Ratregion
502789926.MMHAP26FLA5.seq1911210730610210730800Ratregion
42069D1Arb221781210745979210746187Ratregion
43366D1Got1812471210960566210960812Ratregion
43367D1Got1822671210960582210960848Ratregion
34021D1Mit282121210960636210960848Ratregion
5069554AU0464192741210972893210973217Ratregion
38086D1Rat1441161211170498211170617Ratregion
5041910RH1291292061211195482211195687Ratregion
5499963UniSTS:2357992821211196054211196335Ratregion
5030599BF3982862341211218537211218770Ratregion
5063642BF4044542051211236170211236374Ratregion
5032505D7Ertd753e2461211239614211239859Ratregion
5041816RH1290751831211239678211239860Ratregion
5029269RH1441551231211240358211240480Ratregion
5050102RH1338631941211274413211274606Ratregion
5078784RH140550911211277508211277598Ratregion
5063746BF4049801711211316556211316726Ratregion
38940D1Rat1592001211350207211350399Ratregion
5051645AI1735051221211438250211438371Ratregion
5049672RH1336151801211523713211523892Ratregion
5062562BF4034181621211565400211565561Ratregion
5064472BE1080431601211577100211577259Ratregion
5070456AI5948931501211600440211600589Ratregion
5057446BF418528931211630417211630509Ratregion
36460D1Rat691621211670817211670983Ratregion
5090659AU0498851421211670868211671009Ratregion
5041940RH1291472151211920461211920675Ratregion
1630793D1Cebr11821211931485211931666Ratregion
5059572BE0973061641212017620212017783Ratregion
5029313RH1443231521212176732212176883Ratregion
5063626BE1078692171212199364212199580Ratregion
5061222BI2934852191212218508212218726Ratregion
5035312AI1447281871212278972212279158Ratregion
5029647BF3865941691212311144212311312Ratregion
66620D1Mco433361212311873212312206Ratregion
5026414RH1321172141212317569212317782Ratregion
5045786RH1313782071212319329212319535Ratregion
5064362BF3991271551212331057212331211Ratregion
5030553AW5283961811212331143212331323Ratregion
1630682D1Cebr82361212332476212332711Ratregion
5044962RH1309042081212362544212363436Ratregion
5067348AU0478092671212362679212362945Ratregion
5067344AU0478112771212362703212362979Ratregion
5083984AI1752011241212363484212363607Ratregion
5034255RH1419482111212537965212538445Ratregion
5045484RH1312041831212570238212570420Ratregion
5057179D1Bda411641212570614212570777Ratregion
5502655AI1182251211212602130212603410Ratregion
5081008RH1419112131212603478212603690Ratregion
5058062BF3865241571212606184212606340Ratregion
5506759G452222291212613458212613686Ratregion
5074326RH1379521241212619853212619976Ratregion
5499959UniSTS:2358063691212620694212621062Ratregion
5083395BF3910591591212622472212622630Ratregion
38638D1Rat1522271212654396212654614Ratregion
40534D1Rat2911671212782556212782737Ratregion
5061058BF4019441871213456067213456252Ratregion
43370D1Wox81071213476630213476762Ratregion
10450D1Smu42401213513415213513654Ratregion
5060430BE1100421771213545406213545573Ratregion
5032395AI7874641061213546690213546795Ratregion
5058236AA8590701551213546965213547119Ratregion
5061006BF4016421671213564437213564603Ratregion
5041406RH1288381821213580361213580542Ratregion
5071850RH1353211801213595865213596399Ratregion
5079204RH1407961411213601750213601890Ratregion
5080114RH1413911601213602875213603034Ratregion
5050182RH1339092071213613664213613870Ratregion
7205988Sirt31681213625491213626788Ratregion
5025844RH1299052081213648789213650138Ratregion
5030017BI2797091901213750384213751124Ratregion
7206178UniSTS:532426641213750514213751128Ratregion
38222D1Rat2181711213750631213750803Ratregion
5060376AW5319381601213752148213752307Ratregion
5030143BI2865691521213810849213811000Ratregion
1634103D1Wox761101213811308213811417Ratregion
5043558RH1300942091213812550213812758Ratregion
5048568RH1329782031213817114213817316Ratregion
5074760RH1382031381213874904213875041Ratregion
5039032RH1274741821213898463213898644Ratregion
5057456BF4186312131213932403213932615Ratregion
5027609AI4152142171213970247213970463Ratregion
5049212RH1333502101213973582213973791Ratregion
5505624UniSTS:4867913961213980156213980551Ratregion
5049448RH1334871941214002577214002770Ratregion
5073344RH1373821961214008764214008959Ratregion
5036105Cd151901214011628214011836Ratregion
5057225D1Bda713671214013357214013723Ratregion
5083323BM3919331681214013542214013709Ratregion
5073648RH1375591671214032515214032681Ratregion
5042412RH1294192181214036576214036793Ratregion
5028929RH1428592661214038959214039224Ratregion
5056353RH1443292431214047796214048038Ratregion
43368D1Got1831671214085862214086028Ratregion
5056797RH1445861651214133439214133603Ratregion
5072384RH1368181611214145975214146135Ratregion
5077138RH1395841821214145979214146160Ratregion
5082729AW5205711041214147847214147950Ratregion
5055727RH1439671121214148809214148920Ratregion
5057227D1Bda731831214151400214151582Ratregion
5082287BI2744772261214151417214151754Ratregion
5048938RH1331921801214172199214172378Ratregion
5500989PMC112649P21971214180173214180369Ratregion
5504744PMC86690P14211214180717214181137Ratregion
5051853RH946962521214183026214183277Ratregion
1640080D1Wox421891214183967214184155Ratregion
34703D1Mgh311341214184031214184156Ratregion
5051435AW2106081301214205483214205612Ratregion
5049666RH1336121821214205558214205739Ratregion
5502301RH1243431961214244894214245089Ratregion
5042840RH1296762041214249417214249620Ratregion
5501203PMC154027P43031214249672214250139Ratregion
5500995PMC114617P210221214250927214251948Ratregion
5028480AI4811432301214255230214255459Ratregion
5045254RH1310721921214255233214255424Ratregion
1631493D1Wox681941214265453214265646Ratregion
5051855RH946971971214277990214278186Ratregion
5052835RH1423021921214278303214278494Ratregion
5087830Drd416431214278619214280261Ratregion
1637840D1Wox572141214279086214279299Ratregion
5087832UniSTS:1428681571214280274214280430Ratregion
5058678BI2844621631214280982214281144Ratregion
7192155Drd41031214281265214281367Ratregion
5043558RH1300942091214283865214284073Ratregion
5083077BF3907711881214298824214299011Ratregion
5076570RH1392521491214325831214325979Ratregion
5049388RH1334521931214353165214353357Ratregion
5088809AU0487851911214367978214368168Ratregion
5027609AI4152142171214407153214407369Ratregion
5049212RH1333502101214410488214410697Ratregion
5505624UniSTS:4867913961214417062214417457Ratregion
5049448RH1334871941214439483214439676Ratregion
5073344RH1373821961214445670214445865Ratregion
5036105Cd151901214448534214448742Ratregion
5057225D1Bda713671214450263214450629Ratregion
5083323BM3919331681214450448214450615Ratregion
5073648RH1375591671214469421214469587Ratregion
5042412RH1294192181214473482214473699Ratregion
5028929RH1428592661214475865214476130Ratregion
5056353RH1443292431214484702214484944Ratregion
43368D1Got1831671214522768214522934Ratregion
5084880AA8001861911214583320214583510Ratregion
5040092RH1280842171214605872214606088Ratregion
5028087X149721621214605933214606094Ratregion
5071986RH1353991981214607153214607353Ratregion
5059290BF3879951691214648944214649112Ratregion
5080848RH1418181811214756300214756480Ratregion
5029476D1Bda422661214756331214756596Ratregion
5084628AA9458832111214810883214811093Ratregion
5049318RH1334121881214823994214824181Ratregion
5062242BE1129821681214825327214825493Ratregion
5055507RH1438411831214947669214947851Ratregion
5053975RH1429581411214948822214948962Ratregion
5046020RH1315121811214949427214949607Ratregion
5076050RH1389502341214950635214950867Ratregion
5052470AI2564563031214954193214954495Ratregion
5042320RH1293662081214954194214954401Ratregion
5074834RH1382452421214959538214959779Ratregion
5072922RH1371321731215028446215028618Ratregion
5036440Nttp14091215030461215030869Ratregion
5501716Dusp815771215030895215032471Ratregion
5061666BF4023671011215051564215051664Ratregion
36239D1Rat1111521215097781215097919Ratregion
1635661D1Got3611701215135064215135233Ratregion
1637095D1Wox812071215243564215243770Ratregion
5083523BF3916721181215246406215246523Ratregion
5500501RH1265962101215255453215255662Ratregion
5051018RH1343901931215297047215297239Ratregion
5087181AA8008861881215297054215297241Ratregion
5087362AW5323611741215517400215517573Ratregion
5032599RH1345991971215521719215521915Ratregion
5057688BF3925921301215528770215528899Ratregion
5057181D1Bda433131215541817215542129Ratregion
5506191UniSTS:4987568791215541851215543158Ratregion
5507537REN1159132601215606262215606521Ratregion
5066350PMC15822P16161215610647215611262Ratregion
5026576RH1327421921215659030215659221Ratregion
5072938RH1371411901215662282215662471Ratregion
5052472M903161051215662284215662388Ratregion
5079328RH1409191901215662313215662502Ratregion
1635784D1Wox552041215669550215669753Ratregion
11435D1Arb233001215669977215670289Ratregion
5077568RH1398312051215670766215670970Ratregion
7206676Tnnt32381215679680215680133Ratregion
38954D1Rat1812161215684498215684711Ratregion
33753D1Mit51651215711860215712024Ratregion
42524D1Rat3662001215726311215726510Ratregion
5087912UniSTS:1432962881215744405215744692Ratregion
5501654UniSTS:2654926071215744450215745167Ratregion
5040666RH1284141841215744454215744637Ratregion
5036332H192001215744502215744701Ratregion
7204417H195311215744502215745143Ratregion
5501644UniSTS:2654591631215744537215744699Ratregion
7192852H191481215744552215744699Ratregion
5501652UniSTS:2654912511215744854215745215Ratregion
7206130UniSTS:5321681341215745481215745614Ratregion
7192850H196831215746376215747058Ratregion
5504618PMC316622P13881215755418215755805Ratregion
5029425Huc11931215758634215758826Ratregion
5040590RH1283702171215828282215828498Ratregion
5025042AW7424462491215828548215828796Ratregion
5027801RH947943601215828886215829246Ratregion
5030131BE09886701215829335215829490Ratregion
10769D1Arb242591215830001215830265Ratregion
1627045D1Mco271731215830025215830197Ratregion
629602D1Hmgc82811215830042215830306Ratregion
7192536D1Mgh221501215830050215830199Ratregion
1641445D1Wox581761215830069215830244Ratregion
10768D1Wox221301215830072215830192Ratregion
7206114UniSTS:53213801215830431215831014Ratregion
7204418Igf25181215830739215831481Ratregion
7192870Igf26071215830923215831529Ratregion
7192868Igf23301215831006215831560Ratregion
5501171PMC151856P11161215831188215831528Ratregion
7204413Igf22551215831200215832896Ratregion
7206116UniSTS:5321392251215831207215832873Ratregion
5505020Igf21341215831575215832925Ratregion
5506513UniSTS:276141851215832832215832916Ratregion
5501339ECD217422331215835624215835856Ratregion
5070295RH945851831215837378215837560Ratregion
5504584PMC309645P22561215846479215846734Ratregion
7192874Ins21241215857020215857143Ratregion
5501019PMC123023P33321215857028215857858Ratregion
5501730UniSTS:2670032181215857029215857745Ratregion
7192481Ins13121215857029215857839Ratregion
5503476UniSTS:4626872541215857030215857782Ratregion
5501657PMC24644P61881215857034215857720Ratregion
5035833PMC21231P13011215857051215857850Ratregion
7193046Ins19721215857064215858035Ratregion
5035835PMC21334P12291215857069215857796Ratregion
5052031RH947993001215857071215857869Ratregion
5031268PMC123023P17071215857117215857823Ratregion
5501199PMC153767P22131215857122215857833Ratregion
5057183D1Bda445351215857502215858036Ratregion
5052029RH947982591215857853215858111Ratregion
5061424BF3963901251215881074215881198Ratregion
35204D1Rat3671601215912432215912582Ratregion
35204D1Rat3671601215920148215920314Ratregion
5073598RH1375281331215979322215979454Ratregion
5028482M692001041216073109216073212Ratregion
5035799PMC18740P14091216074286216074694Ratregion
5501453Th11301216077097216078226Ratregion
5066310PMC151031P19211216077249216078169Ratregion
5051857RH946981341216077932216078065Ratregion
11413D1Smu31011216082612216082712Ratregion
5499965UniSTS:2358162001216154027216154226Ratregion
5057223D1Bda703111216154061216154371Ratregion
5501389Ascl22371216155166216155402Ratregion
5036406UniSTS:1438302571216155756216156012Ratregion
5071330RH1350202151216169030216169244Ratregion
5082999BF3906001501216172388216172537Ratregion
5084182AA7994651081216183776216184144Ratregion
5072942RH1371432191216205980216206198Ratregion
5501544D8S51212741216210569216211842Ratregion
33878D1Mit271951216213318216213510Ratregion
5057428BF4183841861216230793216230978Ratregion
5051719RH946181781216253130216253307Ratregion
5039478RH1277282171216253132216253348Ratregion
5507658AA24195801216255917216255955Ratregion
5044546RH1306651971216256261216256457Ratregion
5505887UniSTS:4960014881216274354216274841Ratregion
7192878Kcnq101216293482216293521Ratregion
43377D1Wox91131216325697216325819Ratregion
7192882Kcnq101216335834216335873Ratregion
7192880Kcnq101216370232216370271Ratregion
5036386Kcnq1921216378790216379969Ratregion
5067736AU0475672611216407652216407907Ratregion
5030159BF3891631231216433507216433629Ratregion
5031131AA9642101531216440655216440807Ratregion
5089891AU0494251291216460860216460988Ratregion
5503625UniSTS:4653962971216473690216473986Ratregion
5503625UniSTS:4653962971216480009216480305Ratregion
5068116AU0473381341216555699216555832Ratregion
7192884Kcnq11441216629197216629340Ratregion
5050398RH1340332131216630124216630336Ratregion
5081503BF4201422161216642722216642937Ratregion
5504994Cdkn1c7461216661242216661987Ratregion
5036111UniSTS:1413112121216661509216661720Ratregion
5035915PMC307617P11981216661551216661748Ratregion
5504989Cdkn1c1511216661569216661719Ratregion
7206132Cdkn1c01216661906216662616Ratregion
5505130Cdkn1c01216661958216662611Ratregion
5504991Cdkn1c01216661959216662610Ratregion
5507608Cdkn1c01216661970216662960Ratregion
5501650UniSTS:2654866051216662592216663196Ratregion
5507610Cdkn1c6041216662593216663196Ratregion
5505071Cdkn1c1931216662768216662960Ratregion
5503756UniSTS:47055201216662836216663611Ratregion
5503029MARC_54883-54884:1155673702:101216663137216663721Ratregion
5087462PMC187562P13911216663654216664044Ratregion
5060066BI2859961991216665418216665616Ratregion
5088032Slc22a1l1911216678164216678354Ratregion
1635093D1Got3581841216698339216698522Ratregion
5504953Phlda201216702610216703302Ratregion
7206120UniSTS:5321568081216702616216703423Ratregion
5044104RH1304122201216702808216703325Ratregion
5088130Tssc301216703468216703507Ratregion
5057876BF3862971941216713912216714105Ratregion
5036424Nap1l401216715428216715596Ratregion
5078684RH1404891221216715438216715559Ratregion
5503629UniSTS:4653982571216715648216715904Ratregion
7192170Nap1l42051216737405216737773Ratregion
5047946RH1326202101216759460216759669Ratregion
5050368RH1340161881216776198216776385Ratregion
5060186BI2796601611216777210216777370Ratregion
5060536BE0983171201216808792216808911Ratregion
5051437AI4625381041216866279216866382Ratregion
5070668RH1346351891216866309216866505Ratregion
7192429Osbpl54171216866949216867365Ratregion
5499897UniSTS:23534001216870404216871743Ratregion
1635610D1Got3701501216878811216878955Ratregion
5503896Osbpl59941216884375216885368Ratregion
5500479Osbp2-pending9991216884375216885373Ratregion
5044654RH1307281961216941112216941307Ratregion
5044654RH1307281961216950454216950639Ratregion
5025488RH1285142191216951934216952152Ratregion
5063128BI2959351551216968048216968202Ratregion
5040038RH1280542101217034526217034735Ratregion
5046948RH1320471961217035513217035708Ratregion
34244D1Mgh101381217054291217054418Ratregion
43381D1Got1851441217054320217054463Ratregion
Position Markers

Flank 1: (D1Mgh21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21192,485,903 - 192,486,075 (+)MAPPER
Rnor_6.01210,019,247 - 210,019,418NCBI
Rnor_5.01216,945,382 - 216,945,553UniSTS
RGSC_v3.41197,423,292 - 197,423,464RGD
RGSC_v3.41197,423,293 - 197,423,464UniSTS
RGSC_v3.11197,573,284 - 197,573,456RGD
Celera1190,184,194 - 190,184,363UniSTS
RH 3.4 Map11421.0UniSTS
RH 3.4 Map11421.0RGD
RH 2.0 Map11030.7RGD
Cytogenetic Map1 RGD
Peak: (D1Mit5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21197,697,768 - 197,697,933 (+)MAPPER
Rnor_6.01215,711,860 - 215,712,024NCBI
Rnor_5.01222,606,650 - 222,606,814UniSTS
RGSC_v3.41202,790,380 - 202,790,545RGD
RGSC_v3.41202,790,381 - 202,790,545UniSTS
RGSC_v3.11202,950,608 - 202,951,014RGD
Celera1195,315,542 - 195,315,843UniSTS
Cytogenetic Map1 RGD
Flank 2: (D1Mgh10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21199,050,459 - 199,050,587 (+)MAPPER
Rnor_6.01217,054,291 - 217,054,418NCBI
Rnor_5.01223,910,550 - 223,910,677UniSTS
RGSC_v3.41204,280,278 - 204,280,406RGD
RGSC_v3.41204,280,279 - 204,280,406UniSTS
RGSC_v3.11204,433,664 - 204,433,956RGD
Celera1196,613,223 - 196,613,350UniSTS
RH 2.0 Map11099.1RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)135377692217372257Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149578693217054291Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)182788437239853971Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)199983293216213510Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)199983293216325819Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1100131562236763528Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1108986301219232156Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1108986301219232156Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1108986301238830534Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1122614824262664716Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1125875758262433692Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1126240667217054291Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1130779320219238476Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1137787261236763528Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1137787261236763528Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1144634295241482368Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1153834077232297227Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1154337847215828102Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1156446196214277437Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1156446196243311614Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1156446196274977688Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1161321152273792054Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1161321256273791893Rat
1578778Pur4Proteinuria QTL 43.30.003total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1161321256273791893Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1161784169219232156Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1161784169219232156Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1161784169219232156Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1161784169219232156Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1161784169278228889Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1161784422246226103Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1163796316282763074Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1166577232211577232Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1167027868212027868Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1167394665219232156Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1167394665238830534Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1167394665278228889Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1169971964214971964Rat
2292222Bp307Blood pressure QTL 3073.060.0014arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1174905700233490237Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1174905700264802994Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1175447029220447029Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1175447029220447029Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1175462885220462885Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1184419946215097919Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1184419946215097919Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1185390068230390068Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1188850303233850303Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1189170900234170900Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1189170900234170900Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1189170900234170900Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1189170900234170900Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1189170900234170900Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1189170900234170900Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1189170900234170900Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1189170900234170900Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1189514504214277437Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1189514504234514504Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1190282646235282646Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1191825895279986079Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1192639698278228889Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1192639698278228889Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1193220385238220385Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1193968438261264776Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1194554354239554354Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1194872362239872362Rat
1600363Hc6Hypercalciuria QTL 62.7urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1195598053265002735Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1196395041282763074Rat
1558658Bw59Body weight QTL 593.50.0003body mass (VT:0001259)body weight (CMO:0000012)1196738546241738546Rat
1302787Stl25Serum triglyceride level QTL 252.70.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1197187728230420772Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1197187728238220385Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1197963658242963658Rat
634312Bp143Blood pressure QTL 14330.0002arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1198446729240017341Rat
61378Bp43Blood pressure QTL 4322.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1198572999214277437Rat
724559Pancm1Pancreatic morphology QTL 17.1islet of Langerhans morphology trait (VT:0005215)pancreatic islet damage composite score (CMO:0001156)1198585664236763415Rat
2293083Iddm25Insulin dependent diabetes mellitus QTL 254.18blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1198655722244992610Rat
1300145Rf7Renal function QTL 72.96urine creatinine amount (VT:0010540)urine creatinine level (CMO:0000125)1201146802241482368Rat
1359018Hrtrt20Heart rate QTL 203.08heart pumping trait (VT:2000009)heart rate (CMO:0000002)1201358068221983732Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1201358068252480016Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1202571665264802994Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1202571665264802994Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1205195290250195290Rat
1582206Kidm33Kidney mass QTL 336.9kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1205603081244401301Rat
6480780Insul18Insulin level QTL 184.11blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1206950905218614387Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1208517798266948272Rat
631260Tcas2Tongue tumor susceptibility QTL 24.93tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)1210019247217054418Rat
1358191Ept10Estrogen-induced pituitary tumorigenesis QTL 103.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)1210360774264802828Rat
8552891Epfw5Epididymal fat weight QTL 54.4epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1210652654255652654Rat
634338Hcar4Hepatocarcinoma resistance QTL 44.6liver integrity trait (VT:0010547)liver tumorous lesion number to liver area ratio (CMO:0001210)1210960636236763528Rat
10059590Kidm44Kidney mass QTL 443.420.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1210990171255990171Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1213476630278978026Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
6480777Insul17Insulin level QTL 173.86blood insulin amount (VT:0001560)blood insulin level area under curve (AUC) (CMO:0000351)1215097781216213510Rat
6480783Insul19Insulin level QTL 194.33blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1215494321218614387Rat
1600374Mcs17Mammary carcinoma susceptibility QTL 173mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1215684498260684498Rat
1641926Teswt2Testicular weight QTL 22.82testis mass (VT:1000644)both testes wet weight (CMO:0000175)1215711860258765521Rat
2302375Bw83Body weight QTL 834.870.0002body mass (VT:0001259)body weight (CMO:0000012)1215711860260711860Rat
1298084Thym4Thymus enlargement QTL 410.68thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1215828102260828102Rat
1357335Bw39Body weight QTL 393.3body mass (VT:0001259)body weight (CMO:0000012)1215828102260828102Rat
61376Bp42Blood pressure QTL 4223.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1215828102260828102Rat
1331790Bp201Blood pressure QTL 2013.127arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1216213318245529710Rat
631658Cm7Cardiac mass QTL 75.320.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)1216324817261324817Rat
1358292Cm37Cardiac mass QTL 376.20.00000081heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1216324817261324817Rat
6480773Gluco64Glucose level QTL 645.09blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1217054291218614387Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1217054291281795785Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Tcas2


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Tcas2  Tongue tumor susceptibility QTL 2  Tts2  Tongue tumor susceptibility QTL 2  Symbol updated 1299863 APPROVED
2004-09-08 Tts2  Tongue tumor susceptibility QTL 2  Tscc3  Tongue squamous cell carcinoma QTL 3  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_gene genes relevant to cancer development in this region: Ha-ras, CyclinD1,Igf2 and Gstp 631169
qtl_general this region showed a high frequency of allelic loss (Loss of Heterozygosity) in tumors from animals treated with 4-nitroquinoline 1-oxide (4NQO) 631169