Tcas2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Tcas2 (Tongue tumor susceptibility QTL 2) Rattus norvegicus

Symbol: Tcas2
Name: Tongue tumor susceptibility QTL 2
RGD ID: 631260
Previously known as: Tts2; Tscc3; Tongue squamous cell carcinoma QTL 3
Trait: tongue integrity trait   (VT:0010553)    
Measurement Type: number of squamous cell tumors of the tongue with diameter greater than 3 mm   (CMO:0001950)    
LOD Score: 4.93
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21192,485,903 - 199,050,587RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01210,019,247 - 217,054,418RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01216,945,382 - 223,910,677RGDRnor5.0
RGSC_v3.41197,423,292 - 204,280,406RGDRGSC3.4
RGSC_v3.11197,573,284 - 204,433,956RGD
Cross Type: intercross
Strains Crossed: DA WF 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
DA  (IEA)
WF  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Carcinogenesis modifier loci in rat tongue are subject to frequent loss of heterozygosity. Tanuma J, etal., Int J Cancer 2002 Dec 20;102(6):638-42.
2. Five quantitative trait loci affecting 4-nitroquinoline 1-oxide-induced tongue cancer in the rat. Tanuma JI, etal., Jpn J Cancer Res 2001 Jun;92(6):610-6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7498653LOC102552864uncharacterized LOC1025528641192580494192600465Rat
41074861LOC120099952uncharacterized LOC1200999521192968015192975350Rat
41015854LOC120099951uncharacterized LOC1200999511192977453192980548Rat
1562437Tcerg1ltranscription elongation regulator 1-like1193012937193201860Rat
1565431Mapk1ip1mitogen-activated protein kinase 1 interacting protein 11193655319193665817Rat
708356Ppp2r2dprotein phosphatase 2, regulatory subunit B, delta1193665918193700277Rat
620800Bnip3BCL2 interacting protein 31193708164193725348Rat
7553817LOC102553541uncharacterized LOC1025535411193731097193739373Rat
1307177Jakmip3janus kinase and microtubule interacting protein 31193753134193881105Rat
2409Dpysl4dihydropyrimidinase-like 41193883039193898916Rat
1305864Stk32cserine/threonine kinase 32C1193900718193981723Rat
1559981Lrrc27leucine rich repeat containing 271194004967194035087Rat
41387290LOC120099954uncharacterized LOC1200999541194005130194006623Rat
1307108Pwwp2bPWWP domain containing 2B1194040395194059979Rat
1306168Inpp5ainositol polyphosphate-5-phosphatase A1194190086194380429Rat
1307280Nkx6-2NK6 homeobox 21194380149194383533Rat
1559985Cfap46cilia and flagella associated protein 461194403212194482790Rat
1308241Adgra1adhesion G protein-coupled receptor A11194629744194673254Rat
1565261Kndc1kinase non-catalytic C-lobe domain containing 11194689962194738353Rat
1589375Utf1undifferentiated embryonic cell transcription factor 11194740339194741465Rat
7646072LOC102553731uncharacterized LOC1025537311194746246194748946Rat
41029299LOC120099956uncharacterized LOC1200999561194753901194762856Rat
2325486Mir202microRNA 2021194754730194754801Rat
9271178LOC103691261sperm flagellar protein 1-like1194769043194776455Rat
1566394Adam8ADAM metallopeptidase domain 81194776559194789330Rat
1309597Tubgcp2tubulin gamma complex component 21194791113194817807Rat
40988177LOC12009995760S ribosomal protein L36-like1194805628194806244Rat
1308585Zfp511zinc finger protein 5111194817697194822102Rat
1588225Nt5c3a-ps15'-nucleotidase, cytosolic IIIA, pseudogene 11194832479194833350Rat
620932Msx3msh homeobox 31194839041194842209Rat
7684888LOC102551319uncharacterized LOC1025513191194845214194857999Rat
621719Calycalcyon neuron-specific vesicular protein1194862671194873861Rat
61876Prap1proline-rich acidic protein 11194883078194886874Rat
1311186Fuomfucose mutarotase1194888535194893046Rat
69330Echs1enoyl-CoA hydratase, short chain 11194895036194903863Rat
1561125Paoxpolyamine oxidase1194919655194928498Rat
6497155Mtg1mitochondrial ribosome-associated GTPase 11194931543194944278Rat
1561845Sprnshadow of prion protein1194944602194948448Rat
1333221Or6ae1olfactory receptor family 6 subfamily A member E11194957151194958089Rat
727837Or6f2olfactory receptor family 6 subfamily F member 21194976929194977864Rat
1333358Or6b13olfactory receptor family 6 subfamily B member 131195003659195004615Rat
1307378Scart1scavenger receptor family member expressed on T-cells 11195020750195031807Rat
9257184Mrpl42-ps1mitochondrial ribosomal protein L42, pseudogene 11195068326195071518Rat
41150368LOC120093064scavenger receptor cysteine-rich domain-containing protein SCART1-like1195080285195136263Rat
1333302Or13a19bolfactory receptor family 13 subfamily A member 19B1195160617195161546Rat
1333083Or13o2-ps1olfactory receptor family 13 subfamily O member 2, pseudogene 11195188443195188890Rat
2321900Or13a19olfactory receptor family 13 subfamily A member 191195196027195196956Rat
1333185Or12j2olfactory receptor family 12 subfamily J member 21195209804195210721Rat
1333778Olr293-psolfactory receptor pseudogene 2931195220868195221101Rat
1333429Olr294-psolfactory receptor pseudogene 2941195229270195230031Rat
1333577Or13a27olfactory receptor family 13 subfamily A member 271195235583195236515Rat
1334140Olr296-psolfactory receptor pseudogene 2961195260637195260964Rat
1333199Or12j3olfactory receptor family 12 subfamily J member 31195264681195265604Rat
1334051Or12j2bolfactory receptor family 12 subfamily J member 2B1195315038195315949Rat
1333828Or13a19colfactory receptor family 13 subfamily A member 19C1195334233195335162Rat
1333923Or12j4olfactory receptor family 12 subfamily J member 41195362981195363904Rat
1333614Olr301-psolfactory receptor pseudogene 3011195366554195367209Rat
11391312LOC108349862serine/arginine-rich splicing factor 3 pseudogene1195375344195375899Rat
1332644Or13a27bolfactory receptor family 13 subfamily A member 27B1195393485195394417Rat
1333730Or12j5olfactory receptor family 12 subfamily J member 51195417480195418403Rat
1332957Or13a27colfactory receptor family 13 subfamily A member 27C1195454589195455521Rat
1333124Or13a18olfactory receptor family 13 subfamily A member 181195492445195493377Rat
1333372Or13a23olfactory receptor family 13 subfamily A member 231195517786195518718Rat
1334216Or13a18bolfactory receptor family 13 subfamily A member 18B1195581371195582303Rat
1333032Or13a18colfactory receptor family 13 subfamily A member 18C1195610776195611708Rat
1334251Or13a27eolfactory receptor family 13 subfamily A member 27E1195639216195640148Rat
1333513Or13a27dolfactory receptor family 13 subfamily A member 27D1195652234195653166Rat
1332754Or13a26colfactory receptor family 13 subfamily A member 26C1195702019195702951Rat
1333205Or13a25olfactory receptor family 13 subfamily A member 251195730853195731788Rat
1334099Or13a26bolfactory receptor family 13 subfamily A member 26B1195754003195754938Rat
1334329Olr314-psolfactory receptor pseudogene 3141195766783195767129Rat
1333353Or13a26olfactory receptor family 13 subfamily A member 261195779448195780380Rat
41066460LOC120100392small nucleolar RNA SNORA511195788436195788564Rat
2475Cyp2e1cytochrome P450, family 2, subfamily e, polypeptide 11195840330195850728Rat
1559853Syce1synaptonemal complex central element protein 11195852171195863174Rat
1598059Vmp1-ps1vacuole membrane protein 1, pseudogene 11195863294195875733Rat
1559948Sec61g-ps3Sec61 translocon subunit gamma, pseudogene 31195892846195913494Rat
1309350Urahurate (5-hydroxyiso-) hydrolase1195905763195909159Rat
1561432Scgb1c1secretoglobin, family 1C, member 11195922660195925022Rat
1310028Cimap1aciliary microtubule associated protein 1A1195926034195929250Rat
71051Bet1lBet1 golgi vesicular membrane trafficking protein-like1195931407195935072Rat
727957Ric8aRIC8 guanine nucleotide exchange factor A1195935162195941469Rat
1308374Sirt3sirtuin 31195942066195964472Rat
1305236Psmd13proteasome 26S subunit, non-ATPase 131195964617195976895Rat
2386Cox8bcytochrome c oxidase, subunit VIIIb1195977183195978643Rat
708549Nlrp6NLR family, pyrin domain containing 61196004854196011615Rat
1306015Pgghgprotein-glucosylgalactosylhydroxylysine glucosidase1196038276196044561Rat
1307900Ifitm5interferon induced transmembrane protein 51196045836196052554Rat
69332Ifitm2interferon induced transmembrane protein 21196051539196052719Rat
1307601Ifitm1interferon induced transmembrane protein 11196067163196069169Rat
41370837LOC120097360uncharacterized LOC1200973601196090054196095217Rat
1595844Ifitm3interferon induced transmembrane protein 31196111026196112135Rat
1304718Ifitm6interferon induced transmembrane protein 61196117043196118315Rat
40975851LOC120097361uncharacterized LOC1200973611196153056196157337Rat
11497852LOC108348748small EDRK-rich factor 2 pseudogene1196162790196162970Rat
1310052B4galnt4beta-1,4-N-acetyl-galactosaminyl transferase 41196171394196182294Rat
1309133Pkp3plakophilin 31196187914196198843Rat
1306732Sigirrsingle Ig and TIR domain containing1196195363196208692Rat
1560565Ano9anoctamin 91196208863196230381Rat
40983107Rnu6-1205RNA, U6 small nuclear 12051196216573196216678Rat
7556971LOC102552971uncharacterized LOC1025529711196232907196236176Rat
1307914Ptdss2phosphatidylserine synthase 21196241439196267632Rat
621398Rnh1ribonuclease/angiogenin inhibitor 11196269293196281763Rat
41115869LOC120100190U6 spliceosomal RNA1196288031196288126Rat
2827HrasHRas proto-oncogene, GTPase1196290127196299823Rat
1311654Lrrc56leucine rich repeat containing 561196299843196315170Rat
1307439Lmntd2lamin tail domain containing 21196315112196320880Rat
1306244Rassf7Ras association domain family member 71196319600196323787Rat
7670186LOC102553043uncharacterized LOC1025530431196325398196329434Rat
4888587Mir3574microRNA 35741196326337196326454Rat
2314887Mir210microRNA 2101196326343196326452Rat
708360Phrf1PHD and ring finger domains 11196333663196366901Rat
1307828Irf7interferon regulatory factor 71196367380196370943Rat
620504Cdhr5cadherin-related family member 51196373110196381609Rat
3643Sctsecretin1196382857196383668Rat
2522Drd4dopamine receptor D41196396366196400824Rat
620671Deaf1DEAF1 transcription factor1196401857196435541Rat
1308399Tmem80transmembrane protein 801196435999196444368Rat
1310912Eps8l2EPS8-like 21196446260196471544Rat
620674Taldo1transaldolase 11196493634196503965Rat
1304836Gatd1glutamine amidotransferase class 1 domain containing 11196504533196512561Rat
1309401Cend1cell cycle exit and neuronal differentiation 11196525153196528152Rat
1307826Slc25a22solute carrier family 25 member 221196528471196536398Rat
1311792Pidd1p53-induced death domain protein 11196536815196542808Rat
621775Rplp2ribosomal protein lateral stalk subunit P21196546086196548636Rat
41303933Snora52small nucleolar RNA, H/ACA box 521196547488196547621Rat
1309044Pnpla2patatin-like phospholipase domain containing 21196552723196557805Rat
1560911Cracr2bcalcium release activated channel regulator 2B1196558407196563961Rat
621290Cd151CD151 molecule (Raph blood group)1196564744196568753Rat
1566209Polr2lRNA polymerase II, I and III subunit L1196570051196572060Rat
1305810Tspan4tetraspanin 41196571307196593842Rat
1308955Chid1chitinase domain containing 11196594357196629700Rat
41069559Rnu6-317RNA, U6 small nuclear 3171196649599196649705Rat
71015Ap2a2adaptor related protein complex 2 subunit alpha 21196652315196725609Rat
41029618LOC120097363uncharacterized LOC1200973631196704589196707241Rat
628826Muc6mucin 6, oligomeric mucus/gel-forming1196726678196764842Rat
3123Muc2mucin 2, oligomeric mucus/gel-forming1196799494196831740Rat
62001Muc5acmucin 5AC, oligomeric mucus/gel-forming1196864336196896475Rat
1561983Muc5bmucin 5B, oligomeric mucus/gel-forming1196916861196948830Rat
1304676Tolliptoll interacting protein1196961585196984252Rat
1566256Brsk2BR serine/threonine kinase 21197035505197088624Rat
1562983Mob2MOB kinase activator 21197092991197149978Rat
1306425Dusp8dual specificity phosphatase 81197167392197184285Rat
11491806Krtap5-5l1keratin associated protein 5-5 like 11197240382197241310Rat
41260372Krtap5-2keratin associated protein 5-21197266811197267905Rat
9278179Krtap5-1keratin associated protein 5-11197278886197279893Rat
9254028Krtap5-2-ps1keratin associated protein 5-2, pseudogene 11197288058197296467Rat
2320863Kctd18-ps1potassium channel tetramerization domain containing 18, pseudogene 11197301146197302301Rat
41349421Krtap5-5l2keratin associated protein 5-5 like 21197306627197307614Rat
1592604Krtap5-8keratin associated protein 5-81197446125197446817Rat
1563319Ifitm10interferon induced transmembrane protein 101197507501197524180Rat
621511Ctsdcathepsin D1197527467197539343Rat
41338033LOC120097365uncharacterized LOC1200973651197546933197550986Rat
41194153Rnu6-81RNA, U6 small nuclear 811197577435197577542Rat
68399Syt8synaptotagmin 81197588126197593598Rat
62050Tnni2troponin I2, fast skeletal type1197595012197597554Rat
1306133Lsp1lymphocyte-specific protein 11197614677197648414Rat
1592568Prr33proline rich 331197644903197650774Rat
3883Tnnt3troponin T3, fast skeletal type1197652535197669736Rat
68343Mrpl23mitochondrial ribosomal protein L231197687452197695222Rat
7669488LOC102548505uncharacterized LOC1025485051197705332197782594Rat
2775H19H19 imprinted maternally expressed transcript1197730698197733374Rat
2314883Mir675microRNA 6751197732275197732358Rat
2870Igf2insulin-like growth factor 21197814409197831802Rat
2314879Mir483microRNA 4831197818396197818468Rat
7711326LOC102548568vegetative cell wall protein gp1-like1197830951197834453Rat
2916Ins2insulin 21197843277197992522Rat
11378084LOC108349673uncharacterized LOC1083496731197950020197994765Rat
3853Thtyrosine hydroxylase1198071500198078832Rat
41341459LOC120099959uncharacterized LOC1200999591198077644198123085Rat
2159Ascl2achaete-scute family bHLH transcription factor 21198148999198151406Rat
1308721Tspan32tetraspanin 321198190128198204447Rat
2315Cd81Cd81 molecule1198235861198251660Rat
1307043Tssc4tumor suppressing subtransferable candidate 41198251986198254810Rat
1310620Trpm5transient receptor potential cation channel, subfamily M, member 51198254956198277824Rat
621503Kcnq1potassium voltage-gated channel subfamily Q member 11198291711198624683Rat
41187783LOC120099963uncharacterized LOC1200999631198355931198361600Rat
727892Cdkn1ccyclin-dependent kinase inhibitor 1C1198655394198658097Rat
1303323Slc22a18solute carrier family 22, member 181198670626198694977Rat
1304755Phlda2pleckstrin homology-like domain, family A, member 21198696897198699292Rat
1305391Nap1l4nucleosome assembly protein 1-like 41198709697198746093Rat
41081613Snora54small nucleolar RNA, H/ACA box 541198727462198727588Rat
1310747Cars1cysteinyl-tRNA synthetase 11198753689198796016Rat
41196423Trnav-aac16transfer RNA valine (anticodon AAC) 161198797943198798023Rat
1309693Tnfrsf26tumor necrosis factor receptor superfamily, member 261198802968198823032Rat
1586688Tnfrsf22tumor necrosis factor receptor superfamily, member 221198840452198860713Rat
1308402Osbpl5oxysterol binding protein-like 51198862071198916469Rat
1562011Mrgprgl1MAS related GPR family member G like 11198937757198938662Rat
738044MrgprgMAS related GPR family member G1198947648198951556Rat
738045MrgpreMAS related GPR family member E1198963786198969862Rat
727801Nadsyn1NAD synthetase 11198981559199009853Rat
621769Dhcr77-dehydrocholesterol reductase1199015081199031055Rat
7506405LOC102552318actin-like1199035831199062916Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10450D1Smu42401195841852195842092Ratregion
10768D1Wox221301197816378197816499Ratregion
10769D1Arb242591197816307197816572Ratregion
33878D1Mit271951198211513198211706Ratregion
34021D1Mit282121193422268193422481Ratregion
34244D1Mgh101381199050459199050587Ratregion
34326D1Mgh211501192485903192486075Ratregion
34703D1Mgh311341196302015196302141Ratregion
11413D1Smu31011198081083198081184Ratregion
11435D1Arb233001197655883197656196Ratregion
33753D1Mit51651197697768197697933Ratregion
36239D1Rat1111521197260913197261052Ratregion
37294D1Rat1331621192825098192825253Ratregion
35204D1Rat3671601197898742197898893Ratregion
35204D1Rat3671601197933504197933671Ratregion
37120D1Rat1281121193133375193133485Ratregion
36460D1Rat691621194129394194129561Ratregion
38086D1Rat1441161193630368193630488Ratregion
38222D1Rat2181711196051950196052123Ratregion
40534D1Rat2911671195109528195109710Ratregion
38570D1Rat2402411193113876193114096Ratregion
38638D1Rat1522271194979407194979626Ratregion
38650D1Rat1652131192731695192731896Ratregion
38940D1Rat1592001193810285193810478Ratregion
38954D1Rat1812161197670404197670618Ratregion
42069D1Arb221781193207204193207417Ratregion
42523D1Rat4422411192656653192656930Ratregion
42524D1Rat3662001197712219197712419Ratregion
43366D1Got1812471193422198193422445Ratregion
43367D1Got1822671193422214193422481Ratregion
43368D1Got1831671196640856196641023Ratregion
43370D1Wox81071195804352195804487Ratregion
43377D1Wox91131198324342198324465Ratregion
43381D1Got1851441199050488199050632Ratregion
62487D1Uia61371192986983192987116Ratregion
629602D1Hmgc82811197816348197816613Ratregion
66620D1Mco433361194770975194771309Ratregion
1630682D1Cebr82361194790876194791112Ratregion
1630793D1Cebr11821194391070194391252Ratregion
1631493D1Wox681941196383444196383638Ratregion
1627045D1Mco271731197816331197816504Ratregion
1638653D1Got3391131192487015192487125Ratregion
1641445D1Wox581761197816375197816551Ratregion
1640080D1Wox421891196301951196302140Ratregion
1635093D1Got3581841198692683198692867Ratregion
1635610D1Got3701501198874578198874723Ratregion
1635661D1Got3611701197287449197287619Ratregion
1635784D1Wox552041197655456197655660Ratregion
1637840D1Wox572141196397155196397369Ratregion
1634103D1Wox761101196111621196111731Ratregion
7205988Sirt31681195954054195955352Ratregion
7204417H195311197730795197731437Ratregion
7204418Igf25181197817046197817789Ratregion
7192170Nap1l42051198731750198732119Ratregion
7192850H196831197732669197733352Ratregion
7192852H191481197730845197730993Ratregion
7192868Igf23301197817313197817868Ratregion
7192870Igf26071197817230197817837Ratregion
7192874Ins21241197843329197843453Ratregion
7192878Kcnq101198292160198292200Ratregion
7192880Kcnq101198367696198367736Ratregion
7192882Kcnq101198334404198334444Ratregion
7192884Kcnq11441198623523198623667Ratregion
7192155Drd41031196399334196399437Ratregion
7192536D1Mgh221501197816356197816506Ratregion
7192481Ins13121197843338197844149Ratregion
5035799PMC18740P14091198072757198073166Ratregion
5035833PMC21231P13011197843360197844160Ratregion
5035835PMC21334P12291197843378197844106Ratregion
5035915PMC307617P11981198655877198656075Ratregion
5036105Cd151901196566618196566827Ratregion
5036111UniSTS:1413112121198655835198656047Ratregion
7206676Tnnt32381197665586197666040Ratregion
5036332H192001197730795197730995Ratregion
5036386Kcnq1921198376261198377441Ratregion
5036406UniSTS:1438302571198150752198151009Ratregion
5036424Nap1l401198709772198709941Ratregion
5036440Nttp14091197169453197169862Ratregion
5039032RH1274741821196199523196199705Ratregion
5031268PMC123023P17071197843426197844133Ratregion
7206114UniSTS:53213801197816737197817322Ratregion
7206116UniSTS:5321392251197817514197819181Ratregion
7206120UniSTS:5321568081198696960198697768Ratregion
7206130UniSTS:5321681341197731774197731908Ratregion
7206132Cdkn1c01198656232198656943Ratregion
7206178UniSTS:532426641196051833196052448Ratregion
5034255RH1419482111194862784194863265Ratregion
5026414RH1321172141194776629194776843Ratregion
5028929RH1428592661196593951196594217Ratregion
5026576RH1327421921197644936197645128Ratregion
5029269RH1441551231193700418193700541Ratregion
5029313RH1443231521194636838194636990Ratregion
5029425Huc11931197744928197745121Ratregion
5029476D1Bda422661196896152196896418Ratregion
5029647BF3865941691194770246194770415Ratregion
5032395AI7874641061195875222195875328Ratregion
5032505D7Ertd753e2461193699674193699920Ratregion
5032505D7Ertd753e2461193699674193699920Ratregion
5032599RH1345991971197507615197507812Ratregion
5030017BI2797091901196051703196052444Ratregion
5035312AI1447281871194738073194738260Ratregion
5030131BE09886701197815641197815797Ratregion
5030143BI2865691521196111162196111314Ratregion
5030159BF3891631231198432655198432778Ratregion
5025042AW7424462491197814854197815103Ratregion
5027609AI4152142171196525233196525450Ratregion
5027801RH947943601197815192197815553Ratregion
502789926.MMHAP26FLA5.seq1911193191833193192024Ratregion
5030553AW5283961811194789543194789724Ratregion
5030599BF3982862341193678597193678831Ratregion
5025488RH1285142191198947777198947996Ratregion
5028087X149721621196724038196724200Ratregion
5025844RH1299052081195977184195978534Ratregion
5028480AI4811432301196373221196373451Ratregion
5028482M692001041198071580198071684Ratregion
5031131AA9642101531198440181198440334Ratregion
5051853RH946962521196301010196301262Ratregion
5051857RH946981341198076403198076537Ratregion
5052029RH947982591197844162197844421Ratregion
5052031RH947993001197843380197844179Ratregion
5051435AW2106081301196323470196323600Ratregion
5051437AI4625381041198862086198862190Ratregion
5051645AI1735051221193898632193898754Ratregion
5056797RH1445861651196251392196251557Ratregion
5057183D1Bda445351197843811197844346Ratregion
5051855RH946971971196396059196396256Ratregion
5057179D1Bda411641194895436194895600Ratregion
5057179D1Bda411641194895436194895600Ratregion
5057181D1Bda433131197527713197528026Ratregion
5057225D1Bda713671196568347196568714Ratregion
5057227D1Bda731831196269355196269538Ratregion
5057428BF4183841861198228990198229176Ratregion
5057446BF418528931194088977194089070Ratregion
5057456BF4186312131196232989196233202Ratregion
5055727RH1439671121196266764196266876Ratregion
5057876BF3862971941198708256198708450Ratregion
5058678BI2844621631196399051196399214Ratregion
5056353RH1443292431196602788196603031Ratregion
5059572BE0973061641194478085194478249Ratregion
5058062BF3865241571194930967194931124Ratregion
5057223D1Bda703111198149057198149368Ratregion
5055507RH1438411831197086648197086831Ratregion
5052835RH1423021921196396372196396564Ratregion
5058236AA8590701551195875497195875652Ratregion
5050182RH1339092071195942227195942434Ratregion
5050398RH1340332131198624450198624663Ratregion
5059290BF3879951691196784349196784518Ratregion
5057688BF3925921301197514666197514796Ratregion
5050102RH1338631941193734480193734674Ratregion
5052470AI2564563031197093172197093475Ratregion
5052472M903161051197648190197648295Ratregion
5053975RH1429581411197087801197087942Ratregion
5050368RH1340161881198770517198770705Ratregion
5051719RH946181781198251329198251507Ratregion
5041816RH1290751831193699738193699921Ratregion
5041910RH1291292061193655356193655562Ratregion
5040666RH1284141841197730747197730931Ratregion
5044654RH1307281961198936955198937151Ratregion
5044654RH1307281961198946297198946483Ratregion
5043558RH1300942091196401933196402143Ratregion
5043558RH1300942091196401934196402143Ratregion
5044962RH1309042081194820947194821840Ratregion
5045254RH1310721921196373224196373416Ratregion
5045484RH1312041831194895060194895243Ratregion
5045484RH1312041831194895060194895243Ratregion
5044104RH1304122201198697152198697670Ratregion
5044546RH1306651971198254460198254657Ratregion
5046020RH1315121811197088406197088587Ratregion
5048938RH1331921801196290183196290363Ratregion
5045786RH1313782071194778389194778596Ratregion
5049212RH1333502101196528570196528780Ratregion
5047946RH1326202101198753781198753991Ratregion
5049318RH1334121881196961583196961771Ratregion
5049388RH1334521931196471240196471433Ratregion
5049448RH1334871941196557567196557761Ratregion
5046948RH1320471961199031677199031873Ratregion
5049666RH1336121821196323545196323727Ratregion
5049672RH1336151801193984736193984916Ratregion
5039478RH1277282171198251331198251548Ratregion
5042412RH1294192181196591568196591786Ratregion
5048568RH1329782031196117180196117383Ratregion
5040038RH1280542101199030690199030900Ratregion
5040092RH1280842171196723977196724194Ratregion
5042840RH1296762041196367408196367612Ratregion
5041940RH1291472151194380046194380261Ratregion
5040590RH1283702171197814588197814805Ratregion
5042320RH1293662081197093173197093381Ratregion
7192429Osbpl54171198862756198863173Ratregion
7193046Ins19721197843373197844345Ratregion
5041406RH1288381821195908921195909103Ratregion
7204413Igf22551197817507197819204Ratregion
5072384RH1368181611196263930196264091Ratregion
5077138RH1395841821196263934196264116Ratregion
5076050RH1389502341197089614197089847Ratregion
5077568RH1398312051197656672197656877Ratregion
5076570RH1392521491196443905196444054Ratregion
5080114RH1413911601195931437195931597Ratregion
5072922RH1371321731197167438197167611Ratregion
5079204RH1407961411195930312195930453Ratregion
5079328RH1409191901197648219197648409Ratregion
5078684RH1404891221198709782198709904Ratregion
5078784RH140550911193737575193737666Ratregion
5073598RH1375281331197984958197985091Ratregion
5070668RH1346351891198862116198862313Ratregion
5072938RH1371411901197648188197648378Ratregion
5072942RH1371432191198204224198204443Ratregion
5073344RH1373821961196563754196563950Ratregion
5071986RH1353991981196725258196725459Ratregion
5074326RH1379521241194944637194944761Ratregion
5071330RH1350202151198164034198164249Ratregion
5073648RH1375591671196587507196587674Ratregion
5074760RH1382031381196175964196176102Ratregion
5074834RH1382452421197098517197098759Ratregion
5071850RH1353211801195924427195924962Ratregion
5067344AU0478112771194821106194821383Ratregion
5067348AU0478092671194821082194821349Ratregion
5067736AU0475672611198406029198406285Ratregion
5068116AU0473381341198549957198550091Ratregion
5069554AU0464192741193434527193434854Ratregion
5070295RH945851831197823685197823868Ratregion
5070456AI5948931501194059703194059853Ratregion
5063642BF4044542051193696230193696435Ratregion
5063746BF4049801711193776630193776801Ratregion
5062242BE1129821681196962916196963083Ratregion
5062562BF4034181621194025078194025240Ratregion
5064362BF3991271551194789457194789612Ratregion
5060066BI2859961991198659744198659943Ratregion
5060186BI2796601611198771529198771690Ratregion
5063626BE1078692171194659470194659687Ratregion
5060376AW5319381601196053467196053627Ratregion
5060430BE1100421771195873938195874106Ratregion
5060536BE0983171201198803117198803237Ratregion
5061006BF4016421671195892997195893164Ratregion
5061058BF4019441871195783793195783979Ratregion
5064472BE1080431601194036363194036523Ratregion
5061222BI2934852191194678609194678828Ratregion
5063128BI2959351551198963896198964051Ratregion
5066310PMC151031P19211198075720198076641Ratregion
5066350PMC15822P16161197596548197597164Ratregion
5061424BF3963901251197867384197867509Ratregion
5061666BF4023671011197193133197193234Ratregion
5084182AA7994651081198178784198179153Ratregion
5087832UniSTS:1428681571196398343196398500Ratregion
5087912UniSTS:1432962881197730698197730986Ratregion
5088032Slc22a1l1911198672506198672697Ratregion
5082729AW5205711041196265802196265906Ratregion
5082999BF3906001501198167394198167544Ratregion
5087362AW5323611741197503296197503470Ratregion
5087462PMC187562P13911198657980198658371Ratregion
5089891AU0494251291198460069198460200Ratregion
5083323BM3919331681196568532196568700Ratregion
5088130Tssc301198697812198697852Ratregion
5083395BF3910591591194947256194947415Ratregion
5081503BF4201422161198637048198637264Ratregion
5087830Drd416431196396688196398331Ratregion
5082287BI2744772261196269372196269710Ratregion
5090659AU0498851421194129445194129587Ratregion
5080848RH1418181811196896121196896302Ratregion
5081008RH1419112131194928259194928472Ratregion
5088809AU0487851911196486056196486247Ratregion
5084628AA9458832111196948475196948686Ratregion
5084880AA8001861911196701417196701608Ratregion
5083077BF3907711881196416894196417082Ratregion
5083984AI1752011241194821887194822011Ratregion
5502655AI1182251211194926911194928192Ratregion
5503029MARC_54883-54884:1155673702:101198657463198658048Ratregion
5503476UniSTS:4626872541197843339197844092Ratregion
5503625UniSTS:4653962971198472540198472837Ratregion
5507537REN1159132601197592163197592423Ratregion
5507608Cdkn1c01198656296198657287Ratregion
5507610Cdkn1c6041198656919198657523Ratregion
5507658AA24195801198254116198254155Ratregion
5503629UniSTS:4653982571198709992198710249Ratregion
5503756UniSTS:47055201198657162198657938Ratregion
5504744PMC86690P14211196298701196299122Ratregion
5504618PMC316622P13881197741712197742100Ratregion
5504989Cdkn1c1511198655895198656046Ratregion
5504994Cdkn1c7461198655568198656314Ratregion
5504953Phlda201198696954198697647Ratregion
5504991Cdkn1c01198656285198656937Ratregion
5505071Cdkn1c1931198657094198657287Ratregion
5505130Cdkn1c01198656284198656938Ratregion
5505624UniSTS:4867913961196535144196535540Ratregion
5505887UniSTS:4960014881198272553198273041Ratregion
5506513UniSTS:276141851197819139197819224Ratregion
5500989PMC112649P21971196298157196298354Ratregion
5500995PMC114617P210221196368918196369940Ratregion
5501730UniSTS:2670032181197843338197844055Ratregion
5499959UniSTS:2358063691194945478194945847Ratregion
5499963UniSTS:2357992821193655928193656210Ratregion
5499965UniSTS:2358162001198149023198149223Ratregion
5499897UniSTS:23534001198866212198867552Ratregion
5500479Osbp2-pending9991198880142198881141Ratregion
5501199PMC153767P22131197843431197844143Ratregion
5501203PMC154027P43031196367663196368131Ratregion
5501544D8S51212741198208764198210038Ratregion
5501019PMC123023P33321197843337197844168Ratregion
5501171PMC151856P11161197817495197817836Ratregion
5501339ECD217422331197821931197822164Ratregion
5501389Ascl22371198150162198150399Ratregion
5501453Th11301198075568198076698Ratregion
5501644UniSTS:2654591631197730830197730993Ratregion
5503896Osbpl59941198880142198881136Ratregion
5504584PMC309645P22561197832788197833044Ratregion
5505020Igf21341197817882197819233Ratregion
5501650UniSTS:2654866051198656918198657523Ratregion
5501652UniSTS:2654912511197731147197731509Ratregion
5501654UniSTS:2654926071197730743197731461Ratregion
5501657PMC24644P61881197843343197844030Ratregion
5501716Dusp815771197169887197171464Ratregion
5506191UniSTS:4987568791197527747197529055Ratregion
5506759G452222291194938242194938471Ratregion
5502301RH1243431961196362884196363080Ratregion
152025208rs814350001196963478196963478Ratregion
Position Markers

Flank 1: (D1Mgh21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21192,485,903 - 192,486,075 (+)MAPPER
Rnor_6.01210,019,247 - 210,019,418NCBI
Rnor_5.01216,945,382 - 216,945,553UniSTS
RGSC_v3.41197,423,293 - 197,423,464UniSTS
RGSC_v3.41197,423,292 - 197,423,464RGD
RGSC_v3.11197,573,284 - 197,573,456RGD
Celera1190,184,194 - 190,184,363UniSTS
RH 3.4 Map11421.0UniSTS
RH 3.4 Map11421.0RGD
RH 2.0 Map11030.7RGD
Cytogenetic Map1 RGD
Peak: (D1Mit5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21197,697,768 - 197,697,933 (+)MAPPER
Rnor_6.01215,711,860 - 215,712,024NCBI
Rnor_5.01222,606,650 - 222,606,814UniSTS
RGSC_v3.41202,790,381 - 202,790,545UniSTS
RGSC_v3.41202,790,380 - 202,790,545RGD
RGSC_v3.11202,950,608 - 202,951,014RGD
Celera1195,315,542 - 195,315,843UniSTS
Cytogenetic Map1 RGD
Flank 2: (D1Mgh10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21199,050,459 - 199,050,587 (+)MAPPER
Rnor_6.01217,054,291 - 217,054,418NCBI
Rnor_5.01223,910,550 - 223,910,677UniSTS
RGSC_v3.41204,280,279 - 204,280,406UniSTS
RGSC_v3.41204,280,278 - 204,280,406RGD
RGSC_v3.11204,433,664 - 204,433,956RGD
Celera1196,613,223 - 196,613,350UniSTS
RH 2.0 Map11099.1RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1357335Bw39Body weight QTL 393.3body mass (VT:0001259)body weight (CMO:0000012)1197814409242814409Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1302787Stl25Serum triglyceride level QTL 252.70.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1180359209210702199Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1172609619217609619Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1174133260219133260Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1184550676229550676Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1155866514200866514Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1150700247252085048Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1191019702246062233Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642644214537671Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1171629477216629477Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1151162766225824951Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1150700142252085212Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
8552891Epfw5Epididymal fat weight QTL 54.4epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1193113876238113876Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
724559Pancm1Pancreatic morphology QTL 17.1islet of Langerhans morphology trait (VT:0005215)pancreatic islet damage composite score (CMO:0001156)1181759564214537555Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1164747424209747424Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1169112897197261052Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1185356336231689108Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1169537671214537671Rat
1331790Bp201Blood pressure QTL 2013.127arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1198211513225126682Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
631658Cm7Cardiac mass QTL 75.320.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)1196248093241248093Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1176550523221550523Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1582206Kidm33Kidney mass QTL 336.9kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1188377360224054420Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512201278233Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1183970203243914901Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1156677124201278233Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1180359209218108781Rat
1600374Mcs17Mammary carcinoma susceptibility QTL 173mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1197670404242670404Rat
152025212Bw190Body weight QTL 1905.7body mass (VT:0001259)1123556856196963478Rat
2293083Iddm25Insulin dependent diabetes mellitus QTL 254.18blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1181829673224569684Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
1358191Ept10Estrogen-induced pituitary tumorigenesis QTL 103.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)1192825253243914732Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1151162512201278233Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1174133260196383668Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
2302375Bw83Body weight QTL 834.870.0002body mass (VT:0001259)body weight (CMO:0000012)1197697768242697768Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1167909849212909849Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1171629477216629477Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1171629477216629477Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1195804352257091168Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
1558658Bw59Body weight QTL 593.50.0003body mass (VT:0001259)body weight (CMO:0000012)1178784622223784622Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1151162512201278233Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1171629477216629477Rat
152025235Bw194Body weight QTL 1944.86body mass (VT:0001259)1123556856242907031Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1169537671214537671Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1151162512201278233Rat
152025232Bw192Body weight QTL 1923.93body mass (VT:0001259)1117917486196963478Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1151646613196646613Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1171629477216629477Rat
1300145Rf7Renal function QTL 72.96urine creatinine amount (VT:0010540)urine creatinine level (CMO:0000125)1185145134221264292Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1158633083203633083Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1183970203243914901Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1154561505199561505Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1173108781218108781Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1149448574221264292Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1181133855226133855Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1171629477216629477Rat
1298084Thym4Thymus enlargement QTL 410.68thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1197814409242814409Rat
1359018Hrtrt20Heart rate QTL 203.08heart pumping trait (VT:2000009)heart rate (CMO:0000002)1185356336202902618Rat
1358292Cm37Cardiac mass QTL 376.28e-07heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1196248093241248093Rat
61376Bp42Blood pressure QTL 4223.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1197814409242814409Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
634312Bp143Blood pressure QTL 14330.0002arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1182623426219932796Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1171310381216310381Rat
61378Bp43Blood pressure QTL 4322.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1181746937196383668Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1156677124218753816Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1176869060221869060Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
631260Tcas2Tongue tumor susceptibility QTL 24.93tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)1192485903199050587Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1178810256240830002Rat
2292222Bp307Blood pressure QTL 3073.060.0014arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393213533942Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393243914901Rat
10059590Kidm44Kidney mass QTL 443.420.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1191033875236033875Rat
1641926Teswt2Testicular weight QTL 22.82testis mass (VT:1000644)both testes wet weight (CMO:0000175)1197697768238755659Rat
6480773Gluco64Glucose level QTL 645.09blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459200611765Rat
634338Hcar4Hepatocarcinoma resistance QTL 44.6liver integrity trait (VT:0010547)liver tumorous lesion number to liver area ratio (CMO:0001210)1193422268214537671Rat
6480777Insul17Insulin level QTL 173.86blood insulin amount (VT:0001560)blood insulin level area under curve (AUC) (CMO:0000351)1197260913198211706Rat
6480783Insul19Insulin level QTL 194.33blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1197489281200611765Rat
6480780Insul18Insulin level QTL 184.11blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1189607473200611765Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Tcas2


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Tcas2  Tongue tumor susceptibility QTL 2  Tts2  Tongue tumor susceptibility QTL 2  Symbol updated 1299863 APPROVED
2004-09-08 Tts2  Tongue tumor susceptibility QTL 2  Tscc3  Tongue squamous cell carcinoma QTL 3  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_gene genes relevant to cancer development in this region: Ha-ras, CyclinD1,Igf2 and Gstp 631169
qtl_general this region showed a high frequency of allelic loss (Loss of Heterozygosity) in tumors from animals treated with 4-nitroquinoline 1-oxide (4NQO) 631169