Ahsg (alpha-2-HS-glycoprotein) - Rat Genome Database

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Gene: Ahsg (alpha-2-HS-glycoprotein) Rattus norvegicus
Analyze
Symbol: Ahsg
Name: alpha-2-HS-glycoprotein
RGD ID: 2075
Description: Enables receptor signaling protein tyrosine kinase inhibitor activity. Involved in several processes, including negative regulation of bone mineralization; negative regulation of insulin receptor signaling pathway; and positive regulation of bone resorption. Located in collagen-containing extracellular matrix and extracellular space. Part of protein-containing complex. Human ortholog(s) of this gene implicated in alopecia-mental retardation syndrome 1; coronary artery disease; and type 2 diabetes mellitus. Orthologous to human AHSG (alpha 2-HS glycoprotein); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 59 kDa bone sialic acid-containing protein; Aa2-066; alpha 2 HS-glycoprotein alpha 2 (fetuin); BSP; fetuin-A; glycoprotein PP63; phosphorylated N-glycoprotein pp63; phosphorylated N-glycoprotein, pp63; pp63
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21178,121,388 - 78,127,998 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1178,117,918 - 78,145,999 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1186,871,860 - 86,878,457 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01179,523,661 - 79,530,222 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01178,586,170 - 78,592,769 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01181,711,269 - 81,717,594 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01184,799,840 - 84,805,423 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41180,330,615 - 80,336,658 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11180,388,229 - 80,394,247 (-)NCBI
Celera1176,992,913 - 76,998,938 (-)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,6-dinitrotoluene  (EXP)
9-cis-retinoic acid  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
ampicillin  (EXP)
antirheumatic drug  (ISO)
benzo[a]pyrene  (ISO)
bexarotene  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bleomycin A2  (EXP)
buta-1,3-diene  (ISO)
carbon nanotube  (ISO)
carnosic acid  (ISO)
chromium trinitrate  (ISO)
cisplatin  (EXP,ISO)
clofibrate  (EXP,ISO)
cobalt dichloride  (EXP)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
cyproconazole  (ISO)
dexamethasone  (ISO)
diclofenac  (EXP)
diethylstilbestrol  (EXP)
dimethylarsinic acid  (ISO)
diquat  (ISO)
dobutamine  (ISO)
doramapimod  (ISO)
doxorubicin  (EXP,ISO)
endosulfan  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
folic acid  (ISO)
fumonisin B1  (ISO)
genistein  (EXP,ISO)
gentamycin  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
inulin  (ISO)
isoprenaline  (ISO)
ketoconazole  (EXP)
lead(0)  (ISO)
methotrexate  (ISO)
metronidazole  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
naphthalene  (ISO)
neomycin  (EXP)
nickel atom  (ISO)
nicotinic acid  (ISO)
nitrofen  (EXP)
O-methyleugenol  (ISO)
ozone  (ISO)
paracetamol  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
potassium dichromate  (ISO)
propiconazole  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
tamoxifen  (ISO)
terbutaline  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
triclosan  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (EXP)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. AHSG tag single nucleotide polymorphisms associate with type 2 diabetes and dyslipidemia: studies of metabolic traits in 7,683 white Danish subjects. Andersen G, etal., Diabetes. 2008 May;57(5):1427-32. Epub 2008 Mar 3.
2. Characterization of a natural inhibitor of the insulin receptor tyrosine kinase: cDNA cloning, purification, and anti-mitogenic activity. Auberger P, etal., Cell 1989 Aug 25;58(4):631-40.
3. Effect of serum on organogenesis of the rat testis in vitro. Chartrain I, etal., In Vitro. 1984 Dec;20(12):912-22.
4. Association of serum fetuin A with truncal obesity and dyslipidemia in non-diabetic hemodialysis patients. Chen HY, etal., Eur J Endocrinol. 2009 May;160(5):777-83. Epub 2009 Feb 19.
5. Expression of the pp63 gene encoding the insulin receptor tyrosine kinase inhibitor in proliferating liver and in liver tumors. Colombo BM, etal., Biochem Biophys Res Commun. 1991 Oct 31;180(2):967-71.
6. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
7. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
8. Correlation of maternal serum fetuin/alpha2-HS-glycoprotein concentration with maternal insulin resistance and anthropometric parameters of neonates in normal pregnancy and gestational diabetes. Kalabay L, etal., Eur J Endocrinol. 2002 Aug;147(2):243-8.
9. Human alpha 2-HS-glycoprotein: the A and B chains with a connecting sequence are encoded by a single mRNA transcript. Lee CC, etal., Proc Natl Acad Sci U S A 1987 Jul;84(13):4403-7.
10. Association of alpha2-Heremans-Schmid glycoprotein polymorphisms with subclinical atherosclerosis. Lehtinen AB, etal., J Clin Endocrinol Metab. 2007 Jan;92(1):345-52. Epub 2006 Oct 24.
11. Fetuin-null mice are protected against obesity and insulin resistance associated with aging. Mathews ST, etal., Biochem Biophys Res Commun. 2006 Nov 17;350(2):437-43. Epub 2006 Sep 25.
12. Serum fetuin-A in nondialyzed patients with diabetic nephropathy: relationship with coronary artery calcification. Mehrotra R, etal., Kidney Int. 2005 Mar;67(3):1070-7.
13. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
14. Effects of rat fetuin on stimulation of bone resorption in the presence of parathyroid hormone. Nakamura O, etal., Biosci Biotechnol Biochem. 1999 Aug;63(8):1383-91.
15. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
16. Effects of cytokines and growth factors on phosphorylated fetuin biosynthesis by adult rat hepatocytes in primary culture. Ohnishi T, etal., Biochem Biophys Res Commun. 1994 Apr 15;200(1):598-605.
17. Bone matrix proteins in osteogenesis and remodelling in the neonatal rat mandible as studied by immunolocalization of osteopontin, bone sialoprotein, alpha 2HS-glycoprotein and alkaline phosphatase. Pinero GJ, etal., Arch Oral Biol. 1995 Feb;40(2):145-55.
18. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
19. Biochemical characterization of the serum fetuin-mineral complex. Price PA, etal., J Biol Chem. 2003 Jun 13;278(24):22153-60. Epub 2003 Apr 3.
20. alpha2-Heremans Schmid glycoprotein, a putative inhibitor of tyrosine kinase, prevents glucose toxicity associated with cardiomyocyte dysfunction. Ren J and Davidoff AJ, Diabetes Metab Res Rev. 2002 Jul-Aug;18(4):305-10.
21. GOA pipeline RGD automated data pipeline
22. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
23. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
24. An immunocytochemical demonstration of alpha 2HS-glycoprotein in the developing neocortex of the rat. Sarantis ME and Saunders NR, Neurosci Lett. 1986 Apr 24;65(3):346-50.
25. The serum protein alpha2-HS glycoprotein/fetuin inhibits apatite formation in vitro and in mineralizing calvaria cells. A possible role in mineralization and calcium homeostasis. Schinke T, etal., J Biol Chem. 1996 Aug 23;271(34):20789-96.
26. Acute-phase proteins before cerebral ischemia in stroke-prone rats: identification by proteomics. Sironi L, etal., Stroke. 2001 Mar;32(3):753-60.
27. Alpha2-Heremans-Schmid glycoprotein/fetuin-A is associated with insulin resistance and fat accumulation in the liver in humans. Stefan N, etal., Diabetes Care. 2006 Apr;29(4):853-7.
28. Plasma fetuin-A levels and the risk of type 2 diabetes. Stefan N, etal., Diabetes. 2008 Oct;57(10):2762-7. Epub 2008 Jul 15.
29. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
30. Plasma fetuin-a levels and the risk of myocardial infarction and ischemic stroke. Weikert C, etal., Circulation. 2008 Dec 9;118(24):2555-62. Epub 2008 Nov 24.
Additional References at PubMed
PMID:1370655   PMID:1371750   PMID:1707273   PMID:1849862   PMID:1860865   PMID:7681247   PMID:8207063   PMID:8695840   PMID:12477932   PMID:12556469   PMID:12642050   PMID:12725640  
PMID:16396499   PMID:16502470   PMID:16641100   PMID:19056867   PMID:22206666   PMID:22516433   PMID:23109215   PMID:23344571   PMID:23376485   PMID:23533145   PMID:23710462   PMID:24994603  
PMID:25986658   PMID:26828753   PMID:27068509   PMID:27559042   PMID:34680053  


Genomics

Comparative Map Data
Ahsg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21178,121,388 - 78,127,998 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1178,117,918 - 78,145,999 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1186,871,860 - 86,878,457 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01179,523,661 - 79,530,222 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01178,586,170 - 78,592,769 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01181,711,269 - 81,717,594 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01184,799,840 - 84,805,423 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41180,330,615 - 80,336,658 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11180,388,229 - 80,394,247 (-)NCBI
Celera1176,992,913 - 76,998,938 (-)NCBICelera
Cytogenetic Map11q23NCBI
AHSG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383186,613,060 - 186,621,318 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3186,613,060 - 186,621,318 (+)EnsemblGRCh38hg38GRCh38
GRCh373186,330,849 - 186,339,107 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363187,813,544 - 187,821,801 (+)NCBINCBI36Build 36hg18NCBI36
Build 343187,813,588 - 187,821,807NCBI
Celera3184,767,234 - 184,775,491 (+)NCBICelera
Cytogenetic Map3q27.3NCBI
HuRef3183,739,917 - 183,748,174 (+)NCBIHuRef
CHM1_13186,294,812 - 186,303,069 (+)NCBICHM1_1
T2T-CHM13v2.03189,428,789 - 189,437,047 (+)NCBIT2T-CHM13v2.0
Ahsg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391622,710,793 - 22,718,193 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1622,710,027 - 22,718,199 (+)EnsemblGRCm39 Ensembl
GRCm381622,892,015 - 22,899,451 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1622,891,277 - 22,899,449 (+)EnsemblGRCm38mm10GRCm38
MGSCv371622,892,115 - 22,899,511 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361622,807,376 - 22,814,772 (+)NCBIMGSCv36mm8
Celera1623,452,367 - 23,459,763 (+)NCBICelera
Cytogenetic Map16B1NCBI
cM Map1613.74NCBI
Ahsg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542021,069,681 - 21,078,298 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542021,071,111 - 21,078,397 (-)NCBIChiLan1.0ChiLan1.0
AHSG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan13184,490,039 - 184,499,137 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03183,644,223 - 183,652,620 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13192,111,528 - 192,119,915 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3192,110,770 - 192,119,915 (+)Ensemblpanpan1.1panPan2
AHSG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13419,221,034 - 19,228,866 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3419,221,107 - 19,228,716 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3423,306,490 - 23,314,279 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03419,131,902 - 19,139,692 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3419,127,667 - 19,139,688 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13419,158,092 - 19,165,882 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03419,164,067 - 19,171,857 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03419,392,722 - 19,400,512 (+)NCBIUU_Cfam_GSD_1.0
Ahsg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602117,240,708 - 117,248,141 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365783,332,934 - 3,339,903 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049365783,332,934 - 3,339,903 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AHSG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13124,426,308 - 124,438,840 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113124,426,313 - 124,438,848 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213133,821,515 - 133,828,640 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AHSG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1152,809,234 - 2,818,382 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl152,809,028 - 2,817,514 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606311,551,731 - 11,560,628 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ahsg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473070,149,850 - 70,156,039 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473070,149,461 - 70,156,058 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ahsg
13 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:219
Count of miRNA genes:157
Interacting mature miRNAs:179
Transcripts:ENSRNOT00000058422
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112767241082846715Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)112952841882566702Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)113123913478851519Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)114094618882566702Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)114428575982566702Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)115445753486241447Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)115513672982993457Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)115635142486241447Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)115980279482566545Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116611332182169223Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)116642214886241447Rat
1354593Stl12Serum triglyceride level QTL 123.36blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)116642214886241447Rat
1354656Bvd3Brain ventricular dilatation QTL 33.640.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116944607082846715Rat
10450831Scl80Serum cholesterol level QTL 804.70.01blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)117695713183051965Rat

Markers in Region
AI599402  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21178,121,508 - 78,121,715 (+)MAPPERmRatBN7.2
Rnor_6.01181,711,390 - 81,711,596NCBIRnor6.0
Rnor_5.01184,799,961 - 84,800,167UniSTSRnor5.0
RGSC_v3.41180,330,736 - 80,330,942UniSTSRGSC3.4
Celera1176,993,034 - 76,993,240UniSTS
RH 3.4 Map11651.9UniSTS
Cytogenetic Map11q23UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_012898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AY325170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC091118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M29758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M36547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X63446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: NM_012898   ⟹   NP_037030
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21178,121,388 - 78,127,998 (-)NCBI
Rnor_6.01181,711,269 - 81,717,594 (-)NCBI
Rnor_5.01184,799,840 - 84,805,423 (-)NCBI
RGSC_v3.41180,330,615 - 80,336,658 (-)RGD
Celera1176,992,913 - 76,998,938 (-)RGD
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_037030   ⟸   NM_012898
- Peptide Label: precursor
- UniProtKB: P24090 (UniProtKB/Swiss-Prot),   Q5BKD2 (UniProtKB/Swiss-Prot),   A6JS49 (UniProtKB/TrEMBL),   F1LM19 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Cystatin fetuin-A-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P24090-F1-model_v2 AlphaFold P24090 1-352 view protein structure
AF-Q7TP75-F1-model_v2 AlphaFold Q7TP75 1-553 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2075 AgrOrtholog
BioCyc Gene G2FUF-20829 BioCyc
Ensembl Genes ENSRNOG00000038370 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000055223 ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOP00000073898.1 UniProtKB/TrEMBL
  ENSRNOP00000077003.1 UniProtKB/TrEMBL
  ENSRNOP00000082555.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000058422 ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOT00000078203.2 UniProtKB/TrEMBL
  ENSRNOT00000103458.1 UniProtKB/TrEMBL
  ENSRNOT00000108250.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.450.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7368203 IMAGE-MGC_LOAD
InterPro Cystatin_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cystatin_Fetuin_A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cystatin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_inh_fetuin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25373 UniProtKB/Swiss-Prot
MGC_CLONE MGC:108572 IMAGE-MGC_LOAD
NCBI Gene 25373 ENTREZGENE
PANTHER ALPHA-2-HS-GLYCOPROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FETUIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Cystatin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB AHSG RGD
PhenoGen Ahsg PhenoGen
PROSITE CYSTATIN_FETUIN_A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FETUIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FETUIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SM00043 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR TC217854
UniProt A0A8I5Y586_RAT UniProtKB/TrEMBL
  A0A8I5ZY55_RAT UniProtKB/TrEMBL
  A6JS46_RAT UniProtKB/TrEMBL
  A6JS47_RAT UniProtKB/TrEMBL
  A6JS49 ENTREZGENE, UniProtKB/TrEMBL
  A6JS50_RAT UniProtKB/TrEMBL
  A6JS51_RAT UniProtKB/TrEMBL
  F1LM19 ENTREZGENE, UniProtKB/TrEMBL
  FETUA_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q5BKD2 ENTREZGENE
  Q7TP75_RAT UniProtKB/TrEMBL
UniProt Secondary Q5BKD2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-11-06 Ahsg  alpha-2-HS-glycoprotein    alpha 2 HS-glycoprotein alpha 2 (fetuin)  Name updated 625702 APPROVED
2002-06-10 Ahsg  alpha 2 HS-glycoprotein alpha 2 (fetuin)      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_domains contains three putative N-glycosylation sites 632173
gene_process human homolog may play a role in bone mineralization and immune response 632172
gene_process inhibits insulin receptor tyrosine kinase activity 632173
gene_process inhibits insulin induced cell growth 632173
gene_protein 40.59 kDa protein 632173
gene_protein protein is enriched for the amino acids cysteine and proline 632173
gene_regulation phosphorylation is required for protein activity 632173
gene_transcript human homolog contains a single transcript encoding the two subunits, alpha and beta 632172