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Gene: Sema3e (semaphorin 3E) Rattus norvegicus
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Symbol: Sema3e
Name: semaphorin 3E
Description: Predicted to have chemorepellent activity; neuropilin binding activity; and semaphorin receptor binding activity. Predicted to be involved in several processes, including angiogenesis; neural crest cell migration; and regulation of cell morphogenesis. Predicted to localize to the extracellular space and integral component of plasma membrane. Human ortholog(s) of this gene implicated in CHARGE syndrome. Orthologous to human SEMA3E (semaphorin 3E); INTERACTS WITH bisphenol A; cocaine; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296789; sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; semaphorin-3E
Orthologs:
Homo sapiens (human) : SEMA3E (semaphorin 3E)  HGNC  Alliance
Mus musculus (house mouse) : Sema3e (sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema3e (semaphorin 3E)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA3E (semaphorin 3E)
Canis lupus familiaris (dog) : SEMA3E (semaphorin 3E)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sema3e (semaphorin 3E)
Sus scrofa (pig) : SEMA3E (semaphorin 3E)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0417,314,745 - 17,594,659 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0417,288,508 - 17,411,535 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0417,560,774 - 17,563,239 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4416,523,602 - 16,781,878 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1416,525,151 - 16,673,253 (-)NCBI
Celera415,809,991 - 16,063,707 (-)NCBICelera
Cytogenetic Map4q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sema3e
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310973
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.