Scort17 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Scort17 (Serum corticosterone level QTL 17) Rattus norvegicus

Symbol: Scort17
Name: Serum corticosterone level QTL 17
RGD ID: 9590304
Also known as: GR-mediated negative feedback
Trait: blood corticosterone amount   (VT:0005345)    
Measurement Type: plasma corticosterone level   (CMO:0001173)    
LOD Score: 4.96
P Value: 0.001
Variance: 10.8
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2410,084,089 - 55,084,089RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.048,052,189 - 53,052,189RGD_MAPPER_PIPELINERnor6.0
Rnor_5.047,944,365 - 52,944,365RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.446,913,861 - 51,913,861RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
727782Prkag2protein kinase AMP-activated non-catalytic subunit gamma 241001057410252152Rat
7526315LOC102554253uncharacterized LOC10255425341012088310125470Rat
7680602LOC102554193uncharacterized LOC10255419341016303510164178Rat
41315240LOC120102471uncharacterized LOC12010247141024574610251046Rat
621840RhebRas homolog, mTORC1 binding41027897010320160Rat
41241150LOC120102594U6 spliceosomal RNA41035377810353879Rat
1308547Crygncrystallin, gamma N41039402010401543Rat
41355964LOC120102472uncharacterized LOC12010247241042349610437437Rat
1566180Wdr86WD repeat domain 8641042349610437437Rat
1566180Wdr86WD repeat domain 8641043496810441465Rat
1359489Nub1negative regulator of ubiquitin-like proteins 141044291710473689Rat
1561560RGD1561560similar to Gpd1l protein41052377710527072Rat
1311869Smarcd3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 341054869310580334Rat
1306404Chpf2chondroitin polymerizing factor 241057847010585940Rat
2325494Mir671microRNA 67141058074710580827Rat
1304942Abcf2ATP binding cassette subfamily F member 241059480210607606Rat
1564789Iqca1lIQ motif containing with AAA domain 1 like41061667710628300Rat
1562922Asb10ankyrin repeat and SOCS box-containing 1041063031810644270Rat
621864Gbx1gastrulation brain homeobox 141064595710672486Rat
1310751Agap3ArfGAP with GTPase domain, ankyrin repeat and PH domain 341067406410724848Rat
735120Tmub1transmembrane and ubiquitin-like domain containing 141072949410732060Rat
1311601FastkFas-activated serine/threonine kinase41073227310736332Rat
3711Slc4a2solute carrier family 4 member 241073641910754407Rat
70514Cdk5cyclin-dependent kinase 541075468210760110Rat
708578Asic3acid sensing ion channel subunit 341076050910764987Rat
1307655Abcb8ATP binding cassette subfamily B member 841076620610783598Rat
1560887Atg9bautophagy related 9B41078493410793832Rat
40958365LOC120102208uncharacterized LOC12010220841078763010789628Rat
3186Nos3nitric oxide synthase 341079383410814170Rat
621414Kcnh2potassium voltage-gated channel subfamily H member 241082683410859009Rat
11470826LOC108350647uncharacterized LOC10835064741091070610925138Rat
7679531LOC102554730uncharacterized LOC10255473041091702110923618Rat
1560934Nupl2nucleoporin like 241098555411002591Rat
1305564Klhl7kelch-like family member 741100636611055399Rat
1562906Fam126afamily with sequence similarity 126, member A41113222411239120Rat
41185982LOC120102209SUMO-conjugating enzyme UBC9-like41116255311163825Rat
40988581LOC120102210uncharacterized LOC12010221041117714311207140Rat
7653780LOC102555004uncharacterized LOC10255500441126005011268070Rat
6502346LOC100909675uncharacterized LOC10090967541128760511291820Rat
41215821LOC120102742small nucleolar RNA SNORD9341129011611290186Rat
1591393Tomm7translocase of outer mitochondrial membrane 741130512211311963Rat
1560433Rint1RAD50 interactor 141131941611355773Rat
1307054Pus7pseudouridine synthase 741136016911401139Rat
41232405LOC120102743small nucleolar RNA SNORD9341143996711440037Rat
1305107Srpk2SRSF protein kinase 241146468411655993Rat
1309641Kmt2elysine methyltransferase 2E41165781111727373Rat
41106171LOC120102473uncharacterized LOC12010247341176510411771452Rat
40993653LOC120102618U7 small nuclear RNA41178827611788340Rat
2320473LOC100361290zinc finger, CCHC domain containing 10-like41182543311828119Rat
9159670LOC103692025uncharacterized LOC10369202541183620012379126Rat
9400372LOC103692026macrophage migration inhibitory factor pseudogene41196694511973092Rat
41244972LOC120102766U2 spliceosomal RNA41237540312375483Rat
40977562LOC120102619U7 small nuclear RNA41244095712441013Rat
41392212LOC120102614U7 small nuclear RNA41247725012477311Rat
1561088Orc5origin recognition complex, subunit 541254800712612611Rat
41354020LOC120102148uncharacterized LOC12010214841264090312643798Rat
41018004LOC120102692small nucleolar RNA SNORA1741272068412720803Rat
3553Relnreelin41273617713162956Rat
41142588LOC12010221140S ribosomal protein S2-like41290067712909075Rat
9334471LOC103692036transcription elongation factor B polypeptide 2 pseudogene41311186113117780Rat
7532340LOC102555727quinone oxidoreductase-like protein 1-like41319824313199451Rat
69334Slc26a5solute carrier family 26 member 541321026013249289Rat
3428Psmc2proteasome 26S subunit, ATPase 241325585113270102Rat
620524Dnajc2DnaJ heat shock protein family (Hsp40) member C241327023913297438Rat
41053492LOC120102645small nucleolar RNA SNORA4841328075513280901Rat
621297Pmpcbpeptidase, mitochondrial processing subunit beta41329758313310363Rat
1587329LOC362306hypothetical LOC36230641332548013328608Rat
735197NapepldN-acyl phosphatidylethanolamine phospholipase D41336053213398815Rat
1305915Armc10armadillo repeat containing 1041339900413414594Rat
1642425Fbxl13F-box and leucine-rich repeat protein 1341341488013607079Rat
41107235LOC120102659small nucleolar RNA SNORA1741349698613497113Rat
1560165Lrrc17leucine rich repeat containing 1741350142813531845Rat
1562135Fam185afamily with sequence similarity 185, member A41354202213662967Rat
41018904LOC120102739small nucleolar RNA SNORD8641355582413555909Rat
1559535Ccdc146coiled-coil domain containing 14641366276613811619Rat
620170Fgl2fibrinogen-like 241371056613716207Rat
41335650LOC120102212uncharacterized LOC12010221241375544713761134Rat
1563271Gsapgamma-secretase activating protein41381304613907875Rat
41237841LOC120102457neuroepithelial cell-transforming gene 1 protein-like41395581813973331Rat
41193151LOC120102737small nucleolar RNA SNORA4041398103313981157Rat
7666239LOC102556034uncharacterized LOC10255603441401221314020864Rat
620894Ptpn12protein tyrosine phosphatase, non-receptor type 1241402099714092931Rat
41353109LOC120102213uncharacterized LOC12010221341410059914110132Rat
1308748Rsbn1lround spermatid basic protein 1-like41413807614203972Rat
9685233AptrAlu-mediated CDKN1A/p21 transcriptional regulator41413827514139577Rat
1308939Tmem60transmembrane protein 6041421002914214884Rat
1310593Phtf2putative homeodomain transcription factor 241421519014330513Rat
41146128LOC120102214translation initiation factor IF-2-like41421539514217004Rat
7714606LOC102556088uncharacterized LOC10255608841436851614382349Rat
621855Magi2membrane associated guanylate kinase, WW and PDZ domain containing 241438832215870036Rat
41061536LOC120102478uncharacterized LOC12010247841439387614398745Rat
40992258LOC120102477uncharacterized LOC12010247741458890314591674Rat
41096115LOC12010247460S ribosomal protein L28-like41481578414816098Rat
41012632LOC120102678small nucleolar RNA SNORA1741494878714948916Rat
11420335LOC108350830thymosin beta-10 pseudogene41529919815299866Rat
9417558LOC103692037lamin-B2-like41545728615601866Rat
41303880LOC120102604U6 spliceosomal RNA41558013915580245Rat
41216683NEWGENE_40926764transfer RNA proline (anticodon AGG)41570415715704231Rat
41135223LOC120102723U1 spliceosomal RNA41571845515718559Rat
41065937LOC120102475uncharacterized LOC12010247541580920515825962Rat
9148086LOC103692030uncharacterized LOC10369203041583559015851119Rat
41161253LOC120102476uncharacterized LOC12010247641584694315848437Rat
7681325LOC102547160uncharacterized LOC10254716041587049715898907Rat
2318988LOC100365492hypothetical LOC10036549241588530715888072Rat
41076500LOC120102698small nucleolar RNA SNORA1741628895316289069Rat
6497775LOC100910631DNA-(apurinic or apyrimidinic site) lyase-like41644519516446152Rat
1588841LOC688447hypothetical protein LOC68844741674611716746660Rat
2713Gnai1G protein subunit alpha i141681394116898111Rat
727817Gnat3G protein subunit alpha transducin 341716250017212283Rat
41284761NEWGENE_40934091transfer RNA alanine (anticodon AGC)41719001717190091Rat
2301Cd36CD36 molecule41731734317410084Rat
1565355RGD1565355similar to fatty acid translocase/CD3641742474917465808Rat
41249586LOC120093085platelet glycoprotein 4-like41748783717514900Rat
1309343Sema3csemaphorin 3C41758321217747234Rat
41391017LOC120102215uncharacterized LOC12010221541768857917739337Rat
1563537RGD1563537similar to ribosomal protein S941782268017823238Rat
7549033LOC102551002uncharacterized LOC10255100241796565718047911Rat
41145508LOC120102685small nucleolar RNA SNORA1741807329818073422Rat
2322730LOC100360119dimethyladenosine transferase 1, mitochondrial-like41819251718200323Rat
41273869LOC120102458igE-binding protein-like41836860218404854Rat
7747752LOC102551166cadherin EGF LAG seven-pass G-type receptor 2-like41842787718525060Rat
2794Hgfhepatocyte growth factor41867373618745582Rat
9414363LOC103692033uncharacterized LOC10369203341874450218757594Rat
2247Cacna2d1calcium voltage-gated channel auxiliary subunit alpha2delta 141895061119374969Rat
2322535LOC100360215hypothetical LOC10036021541940646319432154Rat
40929882LOC120102654small nucleolar RNA SNORA4841944411319444260Rat
69406Pclopiccolo (presynaptic cytomatrix protein)41969143920050015Rat
11466909LOC108350655uncharacterized LOC10835065542023314320255059Rat
1310973Sema3esemaphorin 3E42029753420555287Rat
41344080LOC1201025525S ribosomal RNA42051960120519719Rat
7646743LOC102552661uncharacterized LOC10255266142062555220630241Rat
40969825LOC120102459NEDD4-binding protein 1-like42071351420714914Rat
41257705LOC120102460NEDD4-binding protein 1-like42074919220750556Rat
41285801LOC120102461NEDD4-binding protein 1-like42075642420757551Rat
41096301LOC120102462NEDD4-binding protein 1-like42076368920765077Rat
1584092LOC688874similar to NEDD4-binding protein 1 (N4BP1)42080623020807323Rat
40989850LOC120102149NEDD4-binding protein 1-like42081451720815902Rat
41113357LOC120102150NEDD4-binding protein 1-like42082177720823162Rat
1583001LOC688906similar to splicing factor, arginine/serine-rich 2, interacting protein42087234120886738Rat
41165648LOC120102463NEDD4-binding protein 1-like42088708520888188Rat
41240105LOC120102151NEDD4-binding protein 1-like42092961620931001Rat
41199734LOC120102216protein SCAF11-like42102395521027327Rat
7550011LOC102552749MLV-related proviral Env polyprotein-like42105194121053799Rat
41115840LOC120102217uncharacterized LOC12010221742115968721181773Rat
3657Sema3asemaphorin 3A42128239821754834Rat
41320971LOC120102218uncharacterized LOC12010221842209288522119273Rat
727939Sema3dsemaphorin 3D42231676922505930Rat
40955874LOC120102571U6 spliceosomal RNA42296828522968392Rat
41054814LOC120102464MLV-related proviral Env polyprotein-like42298847722990225Rat
41303418LOC120102627small nucleolar RNA SNORA3142308406723084203Rat
1561882LOC287992hypothetical LOC28799242345689423501158Rat
7624497LOC102553320uncharacterized LOC10255332042359296423661292Rat
1562636RGD1562636similar to protein phosphatase 1, regulatory (inhibitor) subunit 3B42376587423768883Rat
1564798RGD1564798similar to RIKEN cDNA 1300007B1242389715723898281Rat
6492128LOC10091160740S ribosomal protein S6-like42409335324096338Rat
9197484LOC103692044mitochondrial import inner membrane translocase subunit Tim8 A pseudogene42428942924289895Rat
2744Grm3glutamate metabotropic receptor 342436485424643972Rat
1563349Elapor2endosome-lysosome associated apoptosis and autophagy regulator family member 242461316324805729Rat
2325362Mir879microRNA 87942472445524724530Rat
11462374LOC108350658uncharacterized LOC10835065842477957124794265Rat
7536117LOC102555663uncharacterized LOC10255566342480591224807670Rat
70966Dmtf1cyclin D binding myb-like transcription factor 142490993724950786Rat
1562351Tmem243transmembrane protein 24342495079124968642Rat
41334218LOC120102603U6 spliceosomal RNA42495272424952824Rat
11367620LOC108350659uncharacterized LOC10835065942495687624966778Rat
41118809LOC120102219uncharacterized LOC12010221942499381825003812Rat
41212670LOC120102465eukaryotic translation initiation factor 3 subunit K-like42501206425012685Rat
70908Crotcarnitine O-octanoyltransferase42506827025133111Rat
620248Abcb4ATP binding cassette subfamily B member 442515099825209489Rat
41286244LOC120102221uncharacterized LOC12010222142517166925175960Rat
41047811LOC120102220uncharacterized protein C11orf98 homolog42517472725175091Rat
3318Abcb1bATP-binding cassette, subfamily B (MDR/TAP), member 1B42524276125325194Rat
41222673LOC120102222uncharacterized LOC12010222242524540025250299Rat
619951Abcb1aATP binding cassette subfamily B member 1A42535746725529941Rat
1587590Rundc3bRUN domain containing 3B42546254325599477Rat
1308774Slc25a40solute carrier family 25, member 4042562000725676422Rat
1305854Dbf4DBF4 zinc finger42567657025701152Rat
1585016Adam22ADAM metallopeptidase domain 2242571605525970932Rat
41165065NEWGENE_40926764transfer RNA proline (anticodon AGG)42578050525780585Rat
41303543LOC120102223uncharacterized LOC12010222342582169625835920Rat
1584485Srisorcin42597349325997879Rat
1560331Steap4STEAP4 metalloreductase42607718226099859Rat
41240640LOC120102760U2 spliceosomal RNA42637529726375438Rat
41340251LOC120102152ran-specific GTPase-activating protein-like42646895426472445Rat
1589640Zfp804bzinc finger protein 804B42660851027144717Rat
41129509LOC120102767U2 spliceosomal RNA42661716926617247Rat
41258698LOC120102775U4 spliceosomal RNA42661813426618285Rat
1564345Tex47testis expressed 4742664409826647393Rat
1589639LOC499995similar to CD2-associated protein42719800627200492Rat
7734714LOC102549955uncharacterized LOC10254995542721068227262917Rat
41114928LOC120102153RNA-binding protein EWS-like42752623327528198Rat
1589637LOC499997similar to Proteasome activator complex subunit 2 (Proteasome activator 28-beta subunit) (PA28beta) (PA28b) (Activator of multicatalytic protease subunit 2) (11S regulator complex beta subunit) (REG-beta)42772478627725601Rat
2323949LOC100362829proteasome subunit alpha type-2-like42783744727838144Rat
1561754RGD1561754similar to high mobility group protein homolog HMG442789164327892122Rat
41392109LOC120102745U1 spliceosomal RNA42794600627946166Rat
1311543Steap1STEAP family member 142827697228287484Rat
1307050Steap2STEAP2 metalloreductase42834776928368177Rat
41233092LOC120102224uncharacterized LOC12010222442837771928379631Rat
6496360Cfap69cilia and flagella associated protein 6942837960428452562Rat
41220038Fam237bfamily with sequence similarity 237 member B42845740228458728Rat
1305878Gtpbp10GTP binding protein 1042847685728494375Rat
1561053Cldn12claudin 1242852265928533647Rat
9118001Pttg1ip2PTTG1IP family member 242856106328585400Rat
11517003LOC108350663uncharacterized LOC10835066342856196828575524Rat
1305544Cdk14cyclin-dependent kinase 1442866668829258865Rat
40946680LOC12010244340S ribosomal protein S15a-like42882455328832585Rat
7573585LOC102549548uncharacterized LOC10254954842906776129096268Rat
41027801LOC120102734U1 spliceosomal RNA42915731229157442Rat
61916Fzd1frizzled class receptor 142931030329314701Rat
41019115LOC120102226uncharacterized LOC12010222642933283229340185Rat
41390098LOC120102572U6 spliceosomal RNA42944279329442899Rat
41107770LOC120102227uncharacterized LOC12010222742958142329591564Rat
2324789LOC100359664mitochondrial transcription termination factor-like42988661129887781Rat
2323518LOC100359722mitochondrial transcription termination factor-like42991257629913741Rat
11390963LOC108351144uncharacterized LOC10835114442992256529975375Rat
9319274LOC103692071disks large homolog 5-like42997932029986368Rat
2481Cyp51cytochrome P450, family 5143003695630055410Rat
620833Akap9A-kinase anchoring protein 943005673830192716Rat
621318Mterf1mitochondrial transcription termination factor 143022634530233402Rat
1562785Lrrd1leucine-rich repeats and death domain containing 143026314730293119Rat
1305929Krit1KRIT1, ankyrin repeat containing43029920330333366Rat
1597088Ankib1ankyrin repeat and IBR domain containing 143033367830457781Rat
40945863LOC12010222860S ribosomal protein L7-like43038981130390201Rat
7727723LOC102550083dead end protein homolog 1-like43041499030418462Rat
1306626Tmbim7transmembrane BAX inhibitor motif containing 743046665130499565Rat
1562004Gatad1GATA zinc finger domain containing 143050753030519109Rat
1559939Pex1peroxisomal biogenesis factor 143051995030558953Rat
1310794Rbm48RNA binding motif protein 4843055906330569409Rat
1588445LOC500007similar to EF hand calcium binding domain 143056904530589503Rat
1306302Fam133bfamily with sequence similarity 133, member B43058964630616291Rat
621121Cdk6cyclin-dependent kinase 643063765030829688Rat
41033620LOC120102229uncharacterized LOC12010222943082950730936497Rat
11356515LOC108350668uncharacterized LOC10835066843090631330909925Rat
1562992RGD1562992similar to heterogeneous nuclear ribonucleoprotein A2/B143093491530936057Rat
1560872RGD1560872similar to interferon induced transmembrane protein 2 (1-8D)43096084530961278Rat
1565361RGD1565361similar to male-enhanced antigen-243108092331085695Rat
6494620LOC100911141zinc finger CCCH-type antiviral protein 1-like43108849231090178Rat
2323113LOC100359932hypothetical LOC10035993243114616431148432Rat
1563091Samd9sterile alpha motif domain containing 943116463931184325Rat
7747029LOC102553788uncharacterized LOC10255378843120032731216722Rat
9213284LOC103692066sterile alpha motif domain-containing protein 9-like43126795031333461Rat
41041657LOC120102230sterile alpha motif domain-containing protein 9-like43132004031333472Rat
1562531Samd9lsterile alpha motif domain containing 9-like43136205431376412Rat
1305697Hepacam2HEPACAM family member 243144619531480859Rat
1304751Vps50VPS50 subunit of EARP/GARPII complex43148442431585617Rat
621001Calcrcalcitonin receptor43166127031736392Rat
2314881Mir653microRNA 65343169271431692810Rat
2314886Mir489microRNA 48943169335531693460Rat
628629Tfpi2tissue factor pathway inhibitor 243198178631986707Rat
1595475Gngt1G protein subunit gamma transducin 143200626732009252Rat
621515Gng11G protein subunit gamma 1143202300332028443Rat
11407309LOC108350669uncharacterized LOC10835066943205605032112584Rat
2203Bet1Bet1 golgi vesicular membrane trafficking protein43211623232126592Rat
7661902LOC102557375uncharacterized LOC10255737543245489832457445Rat
1561836Scand3-ps2SCAN domain containing 3, pseudogene 243251175332512295Rat
621351Col1a2collagen type I alpha 2 chain43256393832598868Rat
7572472LOC102552043uncharacterized LOC10255204343264282332644911Rat
1596912Casd1CAS1 domain containing 143265888832739224Rat
1303201Sgcesarcoglycan, epsilon43277147732842238Rat
1595574Peg10paternally expressed 1043284239432855641Rat
40975034LOC120102559U4 spliceosomal RNA43292226032922342Rat
1559912RGD1559912similar to cytoskeleton associated protein 243295899232961061Rat
632280Ppp1r9aprotein phosphatase 1, regulatory subunit 9A43297050133292360Rat
620062Pon1paraoxonase 143329473733325759Rat
1302965Pon3paraoxonase 343335698333383681Rat
1309954Pon2paraoxonase 243338970233425186Rat
1563114Asb4ankyrin repeat and SOCS box-containing 443350699233544630Rat
1591728LOC680472similar to Villin-143357586133580483Rat
7584396LOC102552448uncharacterized LOC10255244843358265233589860Rat
69061Pdk4pyruvate dehydrogenase kinase 443359179633601798Rat
11435887LOC10835085260S ribosomal protein L29 pseudogene43366405033666091Rat
2512Dync1i1dynein cytoplasmic 1 intermediate chain 143385259734166159Rat
1565889Slc25a13solute carrier family 25 member 1343417922434361912Rat
41148263LOC120102562U6 spliceosomal RNA43421018434210290Rat
9376829LOC103692067protein LLP homolog pseudogene43429933134305057Rat
11431277LOC10835067160S ribosomal protein L31 pseudogene43430256234310161Rat
7657264LOC102554854uncharacterized LOC10255485443441491134438788Rat
9229365LOC103692052uncharacterized LOC10369205243443911634447138Rat
41375555LOC120102231uncharacterized LOC12010223143459265234594248Rat
41305886LOC120102232aldo-keto reductase family 1 member C2-like43460852234616239Rat
1590628Sem1SEM1 26S proteasome subunit43467184834692005Rat
41211262LOC120102776U4 spliceosomal RNA43469280334692885Rat
1566237RGD1566237similar to 60S ribosomal protein L3543487396834874422Rat
6488535LOC100912227uncharacterized LOC10091222743494327134993044Rat
1561539Dlx6distal-less homeobox 643498426434989926Rat
2506Dlx5distal-less homeobox 543499913935003504Rat
1305143Sdhaf3succinate dehydrogenase complex assembly factor 343514313135160416Rat
1589400LOC680676hypothetical protein LOC68067643527172035272156Rat
11453897LOC108350853uncharacterized LOC10835085343529687035304056Rat
3807Tac1tachykinin, precursor 143567918335687180Rat
41397044LOC120102466protein SET-like43574428035747371Rat
41202184LOC120102233uncharacterized LOC12010223343578016035783088Rat
2162Asnsasparagine synthetase (glutamine-hydrolyzing)43578499535803474Rat
9388809LOC103695208DNA-directed RNA polymerases I and III subunit RPAC2-like43592757835928571Rat
621105C1galt1core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 143593074335966102Rat
40976402LOC120102629small nucleolar RNA SNORA3/SNORA45 family43596972735969848Rat
7526246LOC102550307uncharacterized LOC10255030743601868036040591Rat
1564680Col28a1collagen type XXVIII alpha 1 chain43606998036223128Rat
1308432Miosmeiosis regulator for oocyte development43626341936289546Rat
1306810Rpa3replication protein A343630464936307755Rat
1563612Glcci1glucocorticoid induced 143630795636635614Rat
621465Ica1islet cell autoantigen 143665647536804705Rat
7715339LOC102550643uncharacterized LOC10255064343678088436787735Rat
3218Nxph1neurexophilin 143699806837311135Rat
41319059LOC120102653small nucleolar RNA SNORA4843748469037484833Rat
1585861LOC680928similar to TGF beta-inducible nuclear protein 143756118837561974Rat
1565400RGD1565400similar to actin 3 - fruit fly (Drosophila melanogaster) (fragments)43762082037622087Rat
3600Rps4x-ps9ribosomal protein S4, X-linked, pseudogene 943775837337759289Rat
1560448LOC500028hypothetical protein LOC50002843791783737918511Rat
2322347LOC100360305hypothetical LOC10036030543801322738013802Rat
11516558LOC10835085540S ribosomal protein S23 pseudogene43826319438263628Rat
1585825LOC680964similar to high mobility group nucleosomal binding domain 143860485638606026Rat
40971411LOC120102154uncharacterized LOC12010215443864163538646263Rat
41248065LOC120102234uncharacterized LOC12010223443890194838907419Rat
2322154LOC100360402hypothetical LOC10036040243919157039192321Rat
1562387RGD1562387similar to GTP-binding protein NGB43939107939425066Rat
7596691LOC102547989uncharacterized LOC10254798943959860439678420Rat
40982246LOC120102694small nucleolar RNA SNORA1743973394139734060Rat
1584730LOC681013similar to Stathmin (Phosphoprotein p19) (pp19) (Oncoprotein 18) (Op18) (Leukemia-associated phosphoprotein p18) (pp17) (Prosolin) (Metablastin) (Protein Pr22)43976968439770132Rat
1584719Ndufa4NDUFA4, mitochondrial complex associated44000221640009384Rat
1563764Phf14PHD finger protein 1444000969140195870Rat
41002968LOC120102235uncharacterized LOC12010223544011938740123944Rat
41122445LOC120102236uncharacterized LOC12010223644016991540171995Rat
41140158LOC120102687small nucleolar RNA SNORA1744030905740309173Rat
1566201Thsd7athrombospondin type 1 domain containing 7A44046112440899345Rat
7641224LOC102548177uncharacterized LOC10254817744068219240683121Rat
9330178LOC10369207460 kDa heat shock protein, mitochondrial pseudogene44072136940732042Rat
11363596LOC108350856uncharacterized LOC10835085644093701340945223Rat
1587202LOC502730similar to Pyruvate kinase isozymes M1/M2 (Pyruvate kinase muscle isozyme)44115613841277227Rat
1303037Tmem106btransmembrane protein 106B44132812541347315Rat
1561223Vwdevon Willebrand factor D and EGF domains44145357341525421Rat
1583532LOC681159similar to Glucosamine 6-phosphate N-acetyltransferase (Phosphoglucosamine transacetylase) (Phosphoglucosamine acetylase) (EMeg32 protein)44154887241549774Rat
1564521Tas2r7ltaste receptor type 2 member 7-like44156953641570447Rat
41291133LOC120102511uncharacterized LOC12010251144160833041656692Rat
7609534LOC102548489uncharacterized LOC10254848944169446041701116Rat
6493676LOC100911252peptidyl-prolyl cis-trans isomerase A-like44182887341829619Rat
1307778Tmem168transmembrane protein 16844183062341858763Rat
41264909LOC120102634small nucleolar RNA SNORA4444186943541869561Rat
7545679LOC102548706LYR motif-containing protein 4-like44187003941878699Rat
1588441Bmt2base methyltransferase of 25S rRNA 2 homolog44188163041945472Rat
1564656LOC500035hypothetical protein LOC50003544197006441978344Rat
41065803LOC120102155uncharacterized LOC12010215544198883241995216Rat
71011Gpr85G protein-coupled receptor 8544210013842109584Rat
2322826LOC100363521hypothetical LOC10036352144214169642143340Rat
41374934LOC120102237fatty acid-binding protein, heart-like44218552542189209Rat
2323857LOC100359436rCG25051-like44223615742358953Rat
41230048LOC120102706small nucleolar RNA SNORA1744239883242398962Rat
1597981LOC681293similar to heterogeneous nuclear ribonucleoprotein A344246088042461983Rat
41017590LOC120102597U6 spliceosomal RNA44272163142721733Rat
1561312Ppp1r3aprotein phosphatase 1, regulatory subunit 3A44293735342980195Rat
1559697Foxp2forkhead box P244313382743712442Rat
1585845Rbmxl1bRNA binding motif protein, X-linked-like 1B44395626543957973Rat
1309532MdficMyoD family inhibitor domain containing44397231044052162Rat
41011912LOC120102753U2 spliceosomal RNA44418613544186318Rat
41113285LOC12010215660S ribosomal protein L21-like44449843144506388Rat
1562178RGD1562178similar to Adenylate kinase 244496660644967403Rat
3846Tfectranscription factor EC44510612945180236Rat
41270777LOC120102238uncharacterized LOC12010223844525441545365272Rat
1566346Testestin LIM domain protein44536530445403829Rat
7512277LOC102550644uncharacterized LOC10255064444546330045616095Rat
620348Cav2caveolin 244561676645624144Rat
41113020LOC120102239uncharacterized LOC12010223944563428745636852Rat
2280Cav1caveolin 144564062445673708Rat
9112364LOC103692063uncharacterized LOC10369206344568273545711751Rat
7671121LOC102550745uncharacterized LOC10255074544571182445736550Rat
3082MetMET proto-oncogene, receptor tyrosine kinase44579045645898139Rat
7696844LOC102551271uncharacterized LOC10255127144595179445956024Rat
41348167LOC120102240uncharacterized LOC12010224044597227945977980Rat
1549770Capza2capping actin protein of muscle Z-line subunit alpha 244597814246014032Rat
1303148ST7suppression of tumorigenicity 744604165546289745Rat
41017039LOC12010244460S ribosomal protein L23a-like44614691746153007Rat
621346Wnt2Wnt family member 244632840846374673Rat
621579Asz1ankyrin repeat, SAM and basic leucine zipper domain containing 144640048546456085Rat
2332CftrCF transmembrane conductance regulator44656126946728759Rat
41373703LOC120102563U6 spliceosomal RNA44675272146752827Rat
628691Cttnbp2cortactin binding protein 244680097546964681Rat
41325296LOC120102241uncharacterized LOC12010224144690628746931844Rat
1566227RGD1566227similar to RIKEN cDNA 2610101N1044700588447008963Rat
1308442Lsm8LSM8 homolog, U6 small nuclear RNA associated44730625947312125Rat
1564660Ankrd7ankyrin repeat domain 744731227047336754Rat
1597712LOC685171similar to protein disulfide isomerase-associated 644760658247607800Rat
11453204LOC108350673uncharacterized LOC10835067344874646548832870Rat
1588440LOC500044similar to 60S ribosomal protein L7a44899400148996804Rat
41283447LOC120102623small nucleolar RNA SNORA7244956519549565318Rat
2321181LOC100364378hypothetical LOC10036437844963262849633166Rat
7531073LOC102556178uncharacterized LOC10255617844977514649777251Rat
68393Kcnd2potassium voltage-gated channel subfamily D member 244977581250277746Rat
41223455LOC120102479uncharacterized LOC12010247944981092649845924Rat
9383752LOC10369208160S ribosomal protein L3 pseudogene44999112250003764Rat
9374544LOC103692082protein SDA1 homolog45000501450017758Rat
1311102Tspan12tetraspanin 1245031376850389246Rat
41368653LOC120102242cytochrome c oxidase subunit 6C-2-like45039472250401254Rat
1310556Ing3inhibitor of growth family, member 345047795450505168Rat
1563491Cped1cadherin-like and PC-esterase domain containing 145051671250789651Rat
41385577LOC120102243uncharacterized LOC12010224345071201250723386Rat
1562253Wnt16Wnt family member 1645082096850831380Rat
735193Fam3cFAM3 metabolism regulating signaling molecule C45083992950887276Rat
40966555LOC12010251240S ribosomal protein S2-like45118082051181483Rat
1595049LOC685399similar to tumor protein, translationally-controlled 145119572651196520Rat
2323280LOC100359863hypothetical LOC10035986345122310151296237Rat
3455Ptprz1protein tyrosine phosphatase, receptor type Z145139731651595220Rat
1310811Aassaminoadipate-semialdehyde synthase45160646151663136Rat
1593790LOC685467similar to 40S ribosomal protein S345168221851683038Rat
9348766LOC10369208460S ribosomal protein L27 pseudogene45174224651742683Rat
1560480Fezf1Fez family zinc finger 145176275151766078Rat
1559440Cadps2calcium dependent secretion activator 245178041552309641Rat
1596695Rnf133ring finger protein 13345214058452143357Rat
1595417Rnf148ring finger protein 14845214579852152508Rat
11494192LOC108350675uncharacterized LOC10835067545230586952306706Rat
41187450LOC12010215760S ribosomal protein L21-like45238660952387084Rat
620735Tas2r118taste receptor, type 2, member 11845244920852450107Rat
61919Slc13a1solute carrier family 13 member 145256917952647126Rat
41390060LOC120102445thyroid hormone receptor-associated protein 3-like45261899952623801Rat
1591364LOC685649similar to inosine monophosphate dehydrogenase 245273881252740348Rat
4145674IqubIQ motif and ubiquitin domain containing45293176852993795Rat
3155Ndufa5NADH:ubiquinone oxidoreductase subunit A545299732753005685Rat
11519975LOC108350676uncharacterized LOC10835067645301133153070210Rat
727860Asb15ankyrin repeat and SOCS box containing 1545302155353050846Rat
1592092Lmod2leiomodin 245306742853075124Rat
735144WaslWASP like actin nucleation promoting factor45308353653132061Rat
41004839LOC120102244uncharacterized LOC12010224445314025853147391Rat
41046683LOC120102245thymosin beta-10-like45316672153167501Rat
1564219Hyal6hyaluronoglucosaminidase 645323811853250783Rat
1303194Hyal4hyaluronidase 445325617953274819Rat
620547Spam1sperm adhesion molecule 145330274553312913Rat
1566275Hyal5hyaluronoglucosaminidase 545334110553412280Rat
41007128LOC120102673small nucleolar RNA SNORA1745338598353386111Rat
1590212Tmem229atransmembrane protein 229A45344028953445327Rat
40982331LOC120102560U4 spliceosomal RNA45344725653447395Rat
41116076LOC120102770small nucleolar RNA U345347260253472711Rat
41340465LOC120102695small nucleolar RNA SNORA1745369658653696709Rat
1590185LOC685783similar to suppressor of variegation 3-9 homolog 245377885553779842Rat
619848Gpr37G protein-coupled receptor 3745413886054160927Rat
1562696Pot1protection of telomeres 145420533054263137Rat
41278566LOC120102621U7 small nuclear RNA45424986854249928Rat
41203940LOC120102612U7 small nuclear RNA45424994254250003Rat
40965413LOC120102246uncharacterized LOC12010224645426329454267934Rat
41126584LOC120102570U6 spliceosomal RNA45430365054303756Rat
11449079LOC108350678uncharacterized LOC10835067845431932854357983Rat
41236019LOC120102247uncharacterized LOC12010224745443222054444023Rat
1588991LOC685895similar to Thymidine kinase, cytosolic45476723154775827Rat
41096447LOC120102705small nucleolar RNA SNORA1745488282354882955Rat
2320107LOC100361458hypothetical LOC10036145845491521154915991Rat
40973663LOC120102749U1 spliceosomal RNA45500375355003908Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34154D4Mgh2320241024890010249102Ratregion
34200D4Mgh114442133334321333491Ratregion
34238D4Mgh225043952426439524530Ratregion
34423D4Mgh2619043153230431532516Ratregion
34601D4Mgh2814441080790210808048Ratregion
34716D4Mgh1413343950527539505420Ratregion
11310D4Bro117341075026410750427Ratregion
36037D4Rat1313944199617341996312Ratregion
36127D4Rat917242690728526907447Ratregion
37752D4Rat8918343644394736444128Ratregion
37948D4Rat10016843522511535225281Ratregion
36448D4Rat617341477063014770800Ratregion
36530D4Rat1713944839566048395759Ratregion
36632D4Rat244138041107679011076919Ratregion
34967D4Rat1516245011984850119996Ratregion
35160D4Rat1113143640514636405277Ratregion
35625D4Rat1417944446372044463908Ratregion
35847D4Rat1214643846577438465927Ratregion
35895D4Rat117641132007611320244Ratregion
35903D4Rat513841411890414119032Ratregion
35913D4Rat1016842959328729593455Ratregion
39688D4Rat21110644019349640193597Ratregion
39704D4Rat22222442271068522710908Ratregion
39748D4Rat15715045406901054069154Ratregion
39882D4Rat14424841049520110495445Ratregion
39918D4Rat15521944952467449524880Ratregion
38434D4Rat13413945275413852754255Ratregion
38440D8Rat10921743438534834385554Ratregion
38628D4Rat13022243865742738657645Ratregion
39980D4Rat15622144917811649178333Ratregion
40008D4Rat22422345136763751367850Ratregion
40162D4Rat21012543464711334647234Ratregion
38908D4Rat12613542949419529494328Ratregion
38918D4Rat13624141304540213045633Ratregion
39110D4Rat10123344913190649132093Ratregion
39194D4Rat11524043717795037178180Ratregion
39548D4Rat15420344803565448035857Ratregion
42156D4Arb2532043443011934430484Ratregion
42158D4Arb2613043950527539505418Ratregion
41202D4Rat15219744078009840780283Ratregion
41214D4Rat15021641994452419944727Ratregion
42687D4Rat25020341078128510781494Ratregion
42689D4Rat25120142284320422843398Ratregion
42690D4Rat25222543630326136303483Ratregion
42691D4Rat22321243884718238847569Ratregion
42691D4Rat22321243884718238847397Ratregion
40958D4Rat14920141930324019303440Ratregion
41102D4Rat15123543258398032584199Ratregion
41846D4Rat25423345316451053164745Ratregion
41888D4Rat28224544086875240869000Ratregion
41902D4Rat25321044724167547241885Ratregion
43767D4Got1513941067578910675932Ratregion
43773D4Got1426341120879511209058Ratregion
43774D4Got1314941135903311359180Ratregion
43776D4Got1110741044770010447806Ratregion
43778D4Got1619441392419213924386Ratregion
43779D4Got1816341488631214886475Ratregion
43780D4Wox2621041558306015583255Ratregion
43782D4Got2017943854696138547140Ratregion
43783D4Got2116643723314237233308Ratregion
43784D4Got15714743773361237733759Ratregion
43786D4Got2423943831722238317461Ratregion
43787D4Got2517643896180238961978Ratregion
43788D4Got2724744246796842468215Ratregion
43789D4Got3218945079114750791338Ratregion
43790D4Got3413344603747946037612Ratregion
43791D4Got2927544994382349944098Ratregion
43793D4Got3112645326282153262949Ratregion
43794D4Got14622744711539047115617Ratregion
60429D4Got14714645499159154991735Ratregion
60433D4Got1926743644075636441020Ratregion
60435D4Got229043687397336874063Ratregion
60436D4Got2629844019331240193610Ratregion
60438D4Got3026345114149051141755Ratregion
625771D4Got1217041107678611076956Ratregion
625773D4Got2317343854696938547140Ratregion
629591D4Hmgc115944672719146727354Ratregion
66667D4Mco131644594826945948595Ratregion
67352D4Arb1717443775307137753245Ratregion
67353D4Arb1830242280936322809665Ratregion
67354D4Arb1910641229265912292765Ratregion
1358007D16Chm7815842636671126366820Ratregion
1630056D4Got26225641885413218854388Ratregion
1630284D4Ulb113841939005719390195Ratregion
1630504D4Wox5319842535758425357782Ratregion
1631920D4Got28114543346231433462458Ratregion
1631954D4Got28928142420136824201649Ratregion
1627175D4Uia1043928891439289215Ratregion
1627844D4Got28222342780898627809209Ratregion
1628886D4Got29610441966106519661169Ratregion
1629143D4Wox3215542250627722506432Ratregion
1629489D4Uwm420841480828514808493Ratregion
1629639D4Got20117642483400924834180Ratregion
1638783D4Wox2911541075026810750383Ratregion
1639633D4Got20316642030764320307809Ratregion
1641681D4Got20522243675010136750323Ratregion
1640436D4Got30226642572784125728107Ratregion
1640737D4Got30727443147037731470649Ratregion
1634999D4Got28322642825234628252572Ratregion
1635034D4Got25418241169856511698740Ratregion
1635808D4Got20218342157490121575084Ratregion
1635857D4Got25217042608089626081067Ratregion
1636092D4Got27822142941620429416425Ratregion
1636261D4Got28621243304435733044568Ratregion
1636357D4Got26519143464295934643150Ratregion
1636460D4Got28417043002924730029419Ratregion
1636528D2Got33213144970212349702153Ratregion
1636924D4Wox5416644672715946727325Ratregion
1637051D4Ulb317442488289124883065Ratregion
1637341D4Got24827742969707729697349Ratregion
1637821D4Got20415042710022527100375Ratregion
1638224D4Got29226643338273033382996Ratregion
1638305D4Got28515143155157231551723Ratregion
1638383D4Got30616042221757022217730Ratregion
1632459D4Got27615143516722435167370Ratregion
1632475D4Got29516642187376721873935Ratregion
1633717D4Got25516142437029024370451Ratregion
1634118D4Got28711442502054025020656Ratregion
1634619D4Got25013944276291542763049Ratregion
7206384fj64a08.x1044510169745102827Ratregion
7193111Col1a216743256383732564004Ratregion
7241149D4Kini328043102124831021530Ratregion
7241151D4Kini428543148275031483035Ratregion
7241153D4Kini517243155157931551751Ratregion
7241155D4Kini614143163163031631771Ratregion
7241157D4Kini721443172260531722819Ratregion
7241159D4Kini820643199788931998095Ratregion
7241161D4Kini920943202271532022924Ratregion
7241163D4Kini1033243210290532103237Ratregion
7241165D4Kini1143211205832112354Ratregion
7241167D4Kini1229643239799732398293Ratregion
7241169D4Kini1327143375719333757466Ratregion
7241171D4Kini1419442535331625353510Ratregion
7241173D4Kini1523842515516325155403Ratregion
7241175D4Kini1621242689607826896290Ratregion
7241177D4Kini1723242773266327732895Ratregion
7193020Dlx541643499918234999598Ratregion
7193021Dlx56543500316335003228Ratregion
7206264Adam2233342589711225897445Ratregion
5038824RH12735421743329487433295091Ratregion
5038914RH12740518543335700833357193Ratregion
5036434Nos327441079424310794517Ratregion
5038996RH12745318843136208631362274Ratregion
5039044RH12748019445299579452995988Ratregion
5036573AU04847316344995639549956437Ratregion
5036655AU04873128841065713010657418Ratregion
5036837AU04936615541961132819611483Ratregion
5036875AU04948417944968424349684422Ratregion
5037145RH6903121442129089821291112Ratregion
5037197RH9182019243498961734989809Ratregion
5035623WI-1802712542460944824609573Ratregion
5033869RH14042318245413895154139133Ratregion
5025984RH13045718344405177444051957Ratregion
5026014RH13057818241165570711655889Ratregion
7206128UniSTS:53217111443320470533204819Ratregion
5031384PMC155039P119541081109310811288Ratregion
5031516AU04807115244137361441373766Ratregion
5034091RH14133018843285371332853901Ratregion
5034095RH14134218844636575946365947Ratregion
5028809RH14241015941325588013256039Ratregion
5034267RH14199420441548301915483223Ratregion
5028913RH14279723444567204645672280Ratregion
5034343SGC3451213442465233024652466Ratregion
5026456RH13228420345344058153440784Ratregion
5026462RH13230618841975327519753463Ratregion
5026500RH13245119143259860832598800Ratregion
5029141RH14367412443312854133128665Ratregion
5034576BG37332918441258530012585856Ratregion
5034736BI28294315641172315311723309Ratregion
50294210610010I23Rik30941332902013329329Ratregion
5032267AV0284258541069414410694229Ratregion
5035018Cryzl125041319866013198910Ratregion
5026994RH13431921741758346017583677Ratregion
5029713AI55545118743052189530522341Ratregion
5032469D13Ertd614e22741060733110607558Ratregion
5032469D13Ertd614e22741060733110607558Ratregion
5027111GDB:131795414645195579551955941Ratregion
5027139A005W0915345050310950503262Ratregion
5032631RH13471919142597360325973794Ratregion
5032675RH13488020143052005030520251Ratregion
5034960AA80102116443334803433348198Ratregion
5027287AW22754814642931406329314209Ratregion
5027289U247038641316284113162927Ratregion
5027311AV0059169543358994233590037Ratregion
5030001BF38851713441529865615298791Ratregion
5032843RH13669824942928429429284547Ratregion
5035282BF38772015244042285340423004Ratregion
5032955RH13709418143494757434947755Ratregion
5025012AW55010813645178069051780826Ratregion
5027715GDB:4584943041057897810579181Ratregion
5030241AW52683118441364407913644263Ratregion
5033093RH13756619543647304736473242Ratregion
5033123RH13768112145194339751943518Ratregion
5025240RH12755618242836796028368142Ratregion
502783306.MHAa81T_M13Rev.seq14043033158430331724Ratregion
5030467BF39786514345177263651772779Ratregion
5025312RH12783621844214200542142223Ratregion
5030681BI30178415445287830552878465Ratregion
5033369RH13858412841081338910813517Ratregion
5033503RH13906619642563161225631808Ratregion
5028358RH6611815345344395853444111Ratregion
5033755RH14000320541144372611443931Ratregion
5033807RH14019420243059004430590246Ratregion
5025806RH12974919842356110323561301Ratregion
5051188RH13449020243354609933546301Ratregion
5055919RH14407823345015838950158622Ratregion
5056653RH14450217741928653819286715Ratregion
5054585RH14330929444045571040456004Ratregion
5059420AW53066815143326006133260212Ratregion
5057842BF38624717644731518847315364Ratregion
5054749RH14340314943285230232852451Ratregion
5055071RH14358912941406765014067779Ratregion
5058554BF39327824043327976133280001Ratregion
5058594BE10213915742461735024617507Ratregion
5055831RH14402713142460961024609741Ratregion
5055903RH14406910045139779651397896Ratregion
5055125RH14362017043279601832796188Ratregion
5056231RH14425914541108066611080811Ratregion
5056537RH14443615641073027410730430Ratregion
5056687RH14452224744685889646859143Ratregion
5058938BF39384114242567222225672364Ratregion
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Position Markers

Peak: (D4Rat151)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2432,583,980 - 32,584,199 (+)MAPPER
Rnor_6.0431,554,266 - 31,554,484NCBI
Rnor_6.0429,549,895 - 29,550,113NCBI
Rnor_5.0429,463,219 - 29,463,437UniSTS
Rnor_5.0431,425,294 - 31,425,512UniSTS
RGSC_v3.4429,413,655 - 29,414,068RGD
RGSC_v3.4429,413,686 - 29,413,904UniSTS
RGSC_v3.1429,452,129 - 29,452,347RGD
Celera427,967,860 - 27,968,078UniSTS
RH 3.4 Map4449.82RGD
RH 3.4 Map4449.82UniSTS
RH 2.0 Map4215.3RGD
SHRSP x BN Map417.0799RGD
Cytogenetic Map4q13UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61351Bp33Blood pressure QTL 330.0018arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4127716890Rat
61408Scl23Serum cholesterol level QTL 230.0005blood HDL phospholipid amount (VT:0010504)serum high density lipoprotein phospholipid level (CMO:0001567)4127716890Rat
724557Plsm1Polydactyly-luxate syndrome (PLS) morphotypes QTL 10.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)4127716890Rat
1641905Colcr1Colorectal carcinoma resistance QTL 14.30.0003intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)4129494328Rat
61333Gluco16Glucose level QTL 164.30.00001adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)4130372989Rat
9589097Slep11Serum leptin concentration QTL 115.090.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)4131934116Rat
8552903Pigfal2Plasma insulin-like growth factor 1 level QTL 27.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)4131934116Rat
9589046Scfw2Subcutaneous fat weight QTL 25.540.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)4131934116Rat
9590100Sffal4Serum free fatty acids level QTL 47.360.05blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)4131934116Rat
738021Hcar13Hepatocarcinoma resistance QTL 134.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)4132584199Rat
1357341Gluco5Glucose level QTL 56.4adipocyte free fatty acid secretion trait (VT:0010465)absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)4133250345Rat
1357343Gluco4Glucose level QTL 40.00002adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)4133250345Rat
61415Eae11Experimental allergic encephalomyelitis QTL 112.9nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)4139505420Rat
634323Hc2Hypercalciuria QTL 22.15urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)421079645210796Rat
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4521460278882945Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829457114705Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829465958103Rat
1358201Gluco12Glucose level QTL121.6adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake (CMO:0000870)4521839229593287Rat
631642Stl2Serum triglyceride level QTL 23.3blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521917856647776Rat
631209Bw2Body weight QTL24.2retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)4994088544463908Rat
1300141Bp178Blood pressure QTL 178arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)41002490139524530Rat
6478724Anxrr35Anxiety related response QTL 350.00449defecation behavior trait (VT:0010462)defecation measurement (CMO:0000997)41008408955084089Rat
6478766Anxrr47Anxiety related response QTL 470.09637locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)41008408955084089Rat
6478769Anxrr48Anxiety related response QTL 480.02514locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)41008408955084089Rat
8694374Bw155Body weight QTL 1553.390.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)41008408955084089Rat
9590304Scort17Serum corticosterone level QTL 174.960.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)41008408955084089Rat
8552906Pigfal3Plasma insulin-like growth factor 1 level QTL 3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)41008408955084089Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41467806559678065Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41793350862933508Rat
70222Eae2Experimental allergic encephalomyelitis QTL 24.3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)42133334339505420Rat
1354665Stl10Serum triglyceride level QTL 103.57blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42133334344463908Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42133334362278020Rat
8552803Bw144Body weight QTL 14416body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)42271068534430484Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42690728575585128Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42949419581006281Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
11530004Niddm71Non-insulin dependent diabetes mellitus QTL 710.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)43258419952754138Rat
8655949Rf62Renal function QTL 6222blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)43443011944463908Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)43443048482490359Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
4889511Gluco61Glucose level QTL 614.70.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)43717795040869000Rat
2290374Gluco32Glucose level QTL 326.27blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)43717795044463908Rat
1300156Bp179Blood pressure QTL 1792.85arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)43846577439524530Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)43950527573892441Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)43952426474726312Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)44043341485433414Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
10450818Scl76Serum cholesterol level QTL 763.60.01blood VLDL cholesterol amount (VT:0005144)blood high density lipoprotein cholesterol level (CMO:0000052)44917811657114705Rat
10450821Scl77Serum cholesterol level QTL 774.10.01blood VLDL cholesterol amount (VT:0005144)blood high density lipoprotein cholesterol level (CMO:0000052)44917811657114705Rat
10450825Scl78Serum cholesterol level QTL 783.70.01blood VLDL cholesterol amount (VT:0005144)blood low density lipoprotein cholesterol level (CMO:0000053)44917811657114705Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 22.0-56.4 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general software package used: MultiQTL software 8694157
qtl_general measurement method: animals were given a subcutaneous injection of (5ug/100g BW) dexamethasone after 2h blood samples were collected on EDTA, centrifuged at 4000g for 10 min to extract the plasma, plasma corticosterone was measured with an in-house RIA kit using an anti-Cort antibody 8694157