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Gene: Tra2b (transformer 2 beta homolog) Rattus norvegicus
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Symbol: Tra2b
Name: transformer 2 beta homolog
Description: Predicted to have RNA binding activity; identical protein binding activity; and protein domain specific binding activity. Involved in response to reactive oxygen species. Localizes to the nucleus and perinuclear region of cytoplasm. Predicted to colocalize with the nuclear inner membrane. Orthologous to human TRA2B (transformer 2 beta homolog); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 17alpha-ethynylestradiol; 3H-1,2-dithiole-3-thione; acetylsalicylic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: RA301; serine/arginine-rich splicing factor 10; Sfrs10; splicing factor, arginine/serine-rich (transformer 2 Drosophila homolog) 10; splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila); Srsf10; TRA-2 beta; TRA2-beta; transformer 2 beta homolog (Drosophila); transformer-2 protein homolog B; transformer-2 protein homolog beta
Orthologs:
Homo sapiens (human) : TRA2B (transformer 2 beta homolog)  HGNC  Alliance
Mus musculus (house mouse) : Tra2b (transformer 2 beta)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tra2b (transformer 2 beta homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : TRA2B (transformer 2 beta homolog)
Canis lupus familiaris (dog) : TRA2B (transformer 2 beta homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tra2b (transformer 2 beta homolog)
Sus scrofa (pig) : TRA2B (transformer 2 beta homolog)
Chlorocebus sabaeus (African green monkey) : TRA2B (transformer 2 beta homolog)
Heterocephalus glaber (naked mole-rat) : Tra2b (transformer 2 beta homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01182,373,828 - 82,392,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1182,373,870 - 82,392,083 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01185,462,002 - 85,480,379 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41181,026,729 - 81,044,936 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11181,084,317 - 81,102,525 (+)NCBI
Celera1177,651,350 - 77,669,556 (+)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tra2b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619886
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.