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Gene: TRA2B (transformer 2 beta homolog) Canis lupus familiaris

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Symbol:

TRA2B

Name:

transformer 2 beta homolog

RGD ID:

12210225

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cerebral cortex regionalization (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); macular degeneration (ortholog); FOUND IN nuclear inner membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

SFRS10; splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila); transformer 2 beta homolog (Drosophila); transformer-2 protein homolog beta

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TRA2B (transformer 2 beta homolog)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Tra2b (transformer 2 beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tra2b (transformer 2 beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tra2b (transformer 2 beta homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TRA2B (transformer 2 beta homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tra2b (transformer 2 beta homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TRA2B (transformer 2 beta homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TRA2B (transformer 2 beta homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tra2b (transformer 2 beta homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	18,637,725 - 18,656,869 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	18,638,325 - 18,657,862 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	22,723,459 - 22,742,316 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	18,547,719 - 18,566,554 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	18,547,709 - 18,567,712 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	18,574,528 - 18,593,359 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	18,579,233 - 18,598,088 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	18,808,612 - 18,827,472 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

genetic disease (ISO)

macular degeneration (ISO)

progressive supranuclear palsy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to glucose stimulus (ISO)

cerebral cortex regionalization (ISO)

embryonic brain development (ISO)

mRNA splicing, via spliceosome (ISO)

positive regulation of mRNA splicing, via spliceosome (IBA,ISO)

regulation of alternative mRNA splicing, via spliceosome (ISO)

regulation of RNA splicing (ISO)

response to reactive oxygen species (ISO)

Cellular Component

nuclear inner membrane (ISO)

nucleoplasm (ISO)

nucleus (ISO)

perinuclear region of cytoplasm (ISO)

protein-containing complex (ISO)

spliceosomal complex (IBA)

Molecular Function

identical protein binding (ISO)

mRNA binding (ISO)

pre-mRNA binding (ISO)

protein binding (ISO)

protein domain specific binding (ISO)

RNA binding (IBA,IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202	PMID:37756605

Genomics

Comparative Map Data

TRA2B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	18,637,725 - 18,656,869 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	18,638,325 - 18,657,862 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	22,723,459 - 22,742,316 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	18,547,719 - 18,566,554 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	18,547,709 - 18,567,712 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	18,574,528 - 18,593,359 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	18,579,233 - 18,598,088 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	18,808,612 - 18,827,472 (-)	NCBI		UU_Cfam_GSD_1.0

TRA2B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	185,914,558 - 185,938,014 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	185,914,558 - 185,938,103 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	185,632,346 - 185,655,802 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	187,117,226 - 187,138,450 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	187,117,238 - 187,138,458	NCBI
Celera	3	184,070,271 - 184,093,839 (-)	NCBI		Celera
Cytogenetic Map	3	q27.2	NCBI
HuRef	3	183,042,973 - 183,066,541 (-)	NCBI		HuRef
CHM1_1	3	185,595,300 - 185,618,882 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	188,730,348 - 188,753,803 (-)	NCBI		T2T-CHM13v2.0

Tra2b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	22,063,302 - 22,084,755 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	22,063,299 - 22,084,755 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	22,244,552 - 22,266,005 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	22,244,549 - 22,266,005 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	22,245,814 - 22,266,002 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	22,160,997 - 22,181,185 (-)	NCBI		MGSCv36	mm8
Celera	16	22,813,196 - 22,833,384 (-)	NCBI		Celera
Cytogenetic Map	16	B1	NCBI
cM Map	16	13.18	NCBI

Tra2b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	92,293,403 - 92,311,651 (+)	NCBI		GRCr8
mRatBN7.2	11	78,788,880 - 78,807,252 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	78,788,884 - 78,807,249 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	87,524,054 - 87,542,239 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	80,177,721 - 80,195,907 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	79,238,399 - 79,256,583 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	82,373,828 - 82,392,208 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	82,373,870 - 82,392,083 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	85,462,002 - 85,480,379 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	81,026,729 - 81,044,936 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	81,084,317 - 81,102,525 (+)	NCBI
Celera	11	77,651,350 - 77,669,556 (+)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

Tra2b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	21,707,618 - 21,728,186 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	21,707,618 - 21,728,186 (+)	NCBI	ChiLan1.0	ChiLan1.0

TRA2B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	183,783,455 - 183,804,812 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	183,788,174 - 183,809,531 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	182,942,623 - 182,963,938 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	191,414,777 - 191,436,103 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	191,414,777 - 191,436,103 (-)	Ensembl	panpan1.1		panPan2

Tra2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	117,857,971 - 117,878,625 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936578	3,949,820 - 3,970,462 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936578	3,949,820 - 3,970,462 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRA2B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	123,754,864 - 123,780,920 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	123,760,008 - 123,780,919 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TRA2B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	3,493,287 - 3,514,421 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	3,493,541 - 3,513,994 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	12,245,896 - 12,267,049 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tra2b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	70,801,207 - 70,822,178 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	70,801,227 - 70,822,188 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TRA2B
207 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014110425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014110426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038520000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038520001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038520002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038520003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038520004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038648041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038648043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038648044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038648045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038648046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_535833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000021194 ⟹ ENSCAFP00000019680

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	18,639,934 - 18,657,862 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000065351 ⟹ ENSCAFP00000053953

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	18,649,925 - 18,656,468 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000074188 ⟹ ENSCAFP00000062612

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	18,638,325 - 18,657,862 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000081553 ⟹ ENSCAFP00000043657

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	18,638,325 - 18,657,862 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845033918 ⟹ ENSCAFP00845026541

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	34	18,547,709 - 18,567,712 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845034019 ⟹ ENSCAFP00845026623

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	34	18,547,724 - 18,566,455 (-)	Ensembl

RefSeq Acc Id:

XM_014110425 ⟹ XP_013965900

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	18,637,725 - 18,656,869 (-)	NCBI
Dog10K_Boxer_Tasha	34	22,723,459 - 22,742,316 (-)	NCBI

Sequence:

show sequence

CCAAAAGGCGGCACAAAAACTAATAAGCACAAGAAAGGAATCAAGGATGGGAAAAAAGGGCATC
TCCTCCTTCCCACCGCCGCGACGCTTTCCCTGGAAAGTTCCAGAAGAGATGAGGGCGTGGCCGG
TGACATCACCACGCCCCTCGGCGACCACCAACCGCAGGCGCAGGCCGTCCAGCACGCTTACTTT
CCCGCCTCGCTGAGACCCAGAGATGGTGGGTGGGGCTGGGCGGGCTGCGAGGCTTACGTCACGT
CCGGTTCCGGACGCGCCGCCGCTAGAAAGGGAAGACCGAGCGCCGAGGGGCGGGGCCAAGAAAG
CGCGCGTTCTGAAAGGGGAGGAGCCGGCTTAAGGAGCGCCGCGTCACGTCCGGCAGACTTAGAG
CCCGTGCGGAGGCGGTGCGGAGCGCTTCGGTACTCGGCGGCTCGGGAGCCCGTGCGTTCTGTGA
GGCTGCGGCGGAGCCTCTATACAGAAGGCGCCAGAGGTTGGCAGCTTCGATTGAAGCCCGTCGA
GCGGCGACAGCAGCTAGGAGTCATGAGCGACAGCGGCGAGCAGAACTACGGCGAGCGGGAATCC
CGTTCTGCTTCCAGAAGTGGAAGTGCTCATGGATCTGGGAAATCTGCAAGGCATACCCCTGCAA
GGTCTCGCTCCAAGGAAGATTCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGATCTGAATCTAG
GTCTAGATCCAGAAGAAGTTCTCGAAGGCATTATACAAGATCAAGATCTCGGTCCCGCTCCCAT
AGACGATCCCGTAGCAGGTCTTACAGTCGAGATTATCGAAGACGGCATAGCCACAGTCACTCTC
CCATGTCTACTCGCAGGCGTCATGTTGGGAATCGGGCAAATCCTGACCCCAACTGCTGTCTTGG
AGTATTTGGATTGAGCTTGTACACTACAGAAAGAGATCTAAGAGAAGTGTTCTCTAAATATGGC
CCCATTGCTGACGTGTCTATTGTATATGACCAGCAATCTAGGCGTTCCAGAGGATTTGCCTTTG
TATATTTTGAAAATGTAGACGATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGA
TGGACGTAGGATCAGAGTTGATTTCTCTATAACAAAAAGACCACATACCCCAACACCAGGAATT
TACATGGGGAGACCTACCTATGGCAGCTCACGCCGTCGGGATTACTATGACAGAGGATATGATC
GAGGCTATGATGATCGTGACTACTATAGCAGATCATACAGAGGAGGTGGTGGAGGAGGAGGAGG
ATGGAGAGCTGCTCAAGATAGGGATCAGATTTACAGGCGGTCACCTTCTCCTTACTATAGTCGT
GGAGGATACAGATCGCGTTCTAGATCTCGATCATACTCACCTCGTCGCTATTAAAGCATGAAGA
TGAAGACTTTCTGAAACCTACCCTAAAGTTGGGATATTGTTTGTGGACAATATTTTTTATTGTC
TCCTGTTTAAAAAGTGAACAGTGCCTAGTGAAGTTAGGTGACTTTTACACCTTTTATGATGACT
ACTTTTGGTGGAGTTGAAATGCTGTTTTCATTCTGCATTTGTGTAGTTCGGTGCTTTGTTCAAA
GTTAAGTGTTTTCAGAAAAGTATGTTTTGCATGTATTTTTTTACAGTCTAAATTTTGACTGCTG
AGAAGTTTCTATTGTACAAAACTTCATTTAAAAGGTTTTTCTACTGAATCCAGGGTATTCTGAA
GATCGAAGCCTGTGTGTAAAAATGTTACCAAATGGTAAAAAGCAACAATAAAGTTTGGTTTTTA
CTTTTCTTTCTAACATCAATGCTTAGCAGAACTGTTCAGATTAGGTTGTCAGTAGTAAATTTCA
AGACAAAAATACCCATTTTTCTCCAATCCATGAAACATACTATACTTACTATACCTGCAACTAA
GTGTTAAAAATTATGCTCTGTAACCCTGTACTGCTAGTATTAGAACTAAAAAATTTTCAATACA
GCCAATGCTTAATGCTTCTATAACTGTGGATTTGTCAGCCTTTATGTAATCTGTATTATATAAA
GCAGGGGATAAGAAAAGAGGTACACAATGTATGCCTTTAAAAGGCTATTTCTTAAAGCTGTTAC
AAGGGGATAATGGTATTTCAACTAGTTATCAGCAAGTGACAAATACATTCCACCACAAATGTAC
TCTTGTTCTTCTAGCTTTTAGACTATGGAAAAAACTGAGTGCTTCAGAGTTCGGAAAGAGAAGG
GAACACTACACCTGTGTTGTGGATGAACTGAAGACTTTGCCTGTTCATTTTTTAAATATTATTT
TCAGGTCCTTTGCTTACCAAAGGAAGCCCAATTTCACTCAAATGTTTTGAGAACTGTGTTTGAA
TAAATGCAAATGAAAAGAGTAAAAGGCTGGTACAA

hide sequence

RefSeq Acc Id:

XM_014110426 ⟹ XP_013965901

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	18,637,725 - 18,656,512 (-)	NCBI
Dog10K_Boxer_Tasha	34	22,723,459 - 22,742,236 (-)	NCBI

Sequence:

show sequence

GCCGCGTCACGTCCGGCAGACTTAGAGCCCGTGCGGAGGCGGTGCGGAGCGCTTCGGTACTCGG
CGGCTCGGGAGCCCGTGCGTTCTGTGAGGCTGCGGCGGAGCCTCTATACAGAAGGCGCCAGAGG
TTGGCAGCTTCGATTGAAGCCCGTCGAGCGGCGACAGCAGCTAGGAGTCATGAGCGACAGCGGC
GAGCAGAACTACGGCGAGCGGGTCTAGATCCAGAAGAAGTTCTCGAAGGCATTATACAAGATCA
AGATCTCGGTCCCGCTCCCATAGACGATCCCGTAGCAGGTCTTACAGTCGAGATTATCGAAGAC
GGCATAGCCACAGTCACTCTCCCATGTCTACTCGCAGGCGTCATGTTGGGAATCGGGCAAATCC
TGACCCCAACTGCTGTCTTGGAGTATTTGGATTGAGCTTGTACACTACAGAAAGAGATCTAAGA
GAAGTGTTCTCTAAATATGGCCCCATTGCTGACGTGTCTATTGTATATGACCAGCAATCTAGGC
GTTCCAGAGGATTTGCCTTTGTATATTTTGAAAATGTAGACGATGCCAAGGAAGCAAAAGAGCG
TGCCAATGGAATGGAGCTTGATGGACGTAGGATCAGAGTTGATTTCTCTATAACAAAAAGACCA
CATACCCCAACACCAGGAATTTACATGGGGAGACCTACCTATGGCAGCTCACGCCGTCGGGATT
ACTATGACAGAGGATATGATCGAGGCTATGATGATCGTGACTACTATAGCAGATCATACAGAGG
AGGTGGTGGAGGAGGAGGAGGATGGAGAGCTGCTCAAGATAGGGATCAGATTTACAGAAGGCGG
TCACCTTCTCCTTACTATAGTCGTGGAGGATACAGATCGCGTTCTAGATCTCGATCATACTCAC
CTCGTCGCTATTAAAGCATGAAGATGAAGACTTTCTGAAACCTACCCTAAAGTTGGGATATTGT
TTGTGGACAATATTTTTTATTGTCTCCTGTTTAAAAAGTGAACAGTGCCTAGTGAAGTTAGGTG
ACTTTTACACCTTTTATGATGACTACTTTTGGTGGAGTTGAAATGCTGTTTTCATTCTGCATTT
GTGTAGTTCGGTGCTTTGTTCAAAGTTAAGTGTTTTCAGAAAAGTATGTTTTGCATGTATTTTT
TTACAGTCTAAATTTTGACTGCTGAGAAGTTTCTATTGTACAAAACTTCATTTAAAAGGTTTTT
CTACTGAATCCAGGGTATTCTGAAGATCGAAGCCTGTGTGTAAAAATGTTACCAAATGGTAAAA
AGCAACAATAAAGTTTGGTTTTTACTTTTCTTTCTAACATCAATGCTTAGCAGAACTGTTCAGA
TTAGGTTGTCAGTAGTAAATTTCAAGACAAAAATACCCATTTTTCTCCAATCCATGAAACATAC
TATACTTACTATACCTGCAACTAAGTGTTAAAAATTATGCTCTGTAACCCTGTACTGCTAGTAT
TAGAACTAAAAAATTTTCAATACAGCCAATGCTTAATGCTTCTATAACTGTGGATTTGTCAGCC
TTTATGTAATCTGTATTATATAAAGCAGGGGATAAGAAAAGAGGTACACAATGTATGCCTTTAA
AAGGCTATTTCTTAAAGCTGTTACAAGGGGATAATGGTATTTCAACTAGTTATCAGCAAGTGAC
AAATACATTCCACCACAAATGTACTCTTGTTCTTCTAGCTTTTAGACTATGGAAAAAACTGAGT
GCTTCAGAGTTCGGAAAGAGAAGGGAACACTACACCTGTGTTGTGGATGAACTGAAGACTTTGC
CTGTTCATTTTTTAAATATTATTTTCAGGTCCTTTGCTTACCAAAGGAAGCCCAATTTCACTCA
AATGTTTTGAGAACTGTGTTTGAATAAATGCAAATGAAAAGAGTAAAAGGCTGGTACAA

hide sequence

RefSeq Acc Id:

XM_022414077 ⟹ XP_022269785

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	18,637,725 - 18,656,512 (-)	NCBI
Dog10K_Boxer_Tasha	34	22,723,459 - 22,742,235 (-)	NCBI

Sequence:

show sequence

GCCGCGTCACGTCCGGCAGACTTAGAGCCCGTGCGGAGGCGGTGCGGAGCGCTTCGGTACTCGG
CGGCTCGGGAGCCCGTGCGTTCTGTGAGGCTGCGGCGGAGCCTCTATACAGAAGGCGCCAGAGG
TTGGCAGCTTCGATTGAAGCCCGTCGAGCGGCGACAGCAGCTAGGAGTCATGAGCGACAGCGGC
GAGCAGAACTACGGCGAGCGGGTTAATGTTGAAGAAGGAAAATGCGGAAGTCGTCATTTGACAA
GTTTTATAAATGAGTATTTGAAGCTCAGGAATAAGTGAAGCTGAAATTTGAAAAAATAAAAGAA
AGAATGCATGCTAATTATCAGACCAGAAGTCCCACTTGTAGAATATTGAGCAATTTGTGTGAAG
TGGGGAAGATGAAAGAAGTCAGAATTTGAAACGGAAGAATGAAGAAAAGAAATAAAAATGAAGT
TAAGATAAGAAGTAATCTGGAATCAGAAAGCACTACGCTAAGAATCCCGTTCTGCTTCCAGAAG
TGGAAGTGCTCATGGATCTGGGAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAA
GATTCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGATCTGAATCTAGGTCTAGATCCAGAAGAA
GTTCTCGAAGGCATTATACAAGATCAAGATCTCGGTCCCGCTCCCATAGACGATCCCGTAGCAG
GTCTTACAGTCGAGATTATCGAAGACGGCATAGCCACAGTCACTCTCCCATGTCTACTCGCAGG
CGTCATGTTGGGAATCGGGCAAATCCTGACCCCAACTGCTGTCTTGGAGTATTTGGATTGAGCT
TGTACACTACAGAAAGAGATCTAAGAGAAGTGTTCTCTAAATATGGCCCCATTGCTGACGTGTC
TATTGTATATGACCAGCAATCTAGGCGTTCCAGAGGATTTGCCTTTGTATATTTTGAAAATGTA
GACGATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGATGGACGTAGGATCAGAG
TTGATTTCTCTATAACAAAAAGACCACATACCCCAACACCAGGAATTTACATGGGGAGACCTAC
CTATGGCAGCTCACGCCGTCGGGATTACTATGACAGAGGATATGATCGAGGCTATGATGATCGT
GACTACTATAGCAGATCATACAGAGGAGGTGGTGGAGGAGGAGGAGGATGGAGAGCTGCTCAAG
ATAGGGATCAGATTTACAGAAGGCGGTCACCTTCTCCTTACTATAGTCGTGGAGGATACAGATC
GCGTTCTAGATCTCGATCATACTCACCTCGTCGCTATTAAAGCATGAAGATGAAGACTTTCTGA
AACCTACCCTAAAGTTGGGATATTGTTTGTGGACAATATTTTTTATTGTCTCCTGTTTAAAAAG
TGAACAGTGCCTAGTGAAGTTAGGTGACTTTTACACCTTTTATGATGACTACTTTTGGTGGAGT
TGAAATGCTGTTTTCATTCTGCATTTGTGTAGTTCGGTGCTTTGTTCAAAGTTAAGTGTTTTCA
GAAAAGTATGTTTTGCATGTATTTTTTTACAGTCTAAATTTTGACTGCTGAGAAGTTTCTATTG
TACAAAACTTCATTTAAAAGGTTTTTCTACTGAATCCAGGGTATTCTGAAGATCGAAGCCTGTG
TGTAAAAATGTTACCAAATGGTAAAAAGCAACAATAAAGTTTGGTTTTTACTTTTCTTTCTAAC
ATCAATGCTTAGCAGAACTGTTCAGATTAGGTTGTCAGTAGTAAATTTCAAGACAAAAATACCC
ATTTTTCTCCAATCCATGAAACATACTATACTTACTATACCTGCAACTAAGTGTTAAAAATTAT
GCTCTGTAACCCTGTACTGCTAGTATTAGAACTAAAAAATTTTCAATACAGCCAATGCTTAATG
CTTCTATAACTGTGGATTTGTCAGCCTTTATGTAATCTGTATTATATAAAGCAGGGGATAAGAA
AAGAGGTACACAATGTATGCCTTTAAAAGGCTATTTCTTAAAGCTGTTACAAGGGGATAATGGT
ATTTCAACTAGTTATCAGCAAGTGACAAATACATTCCACCACAAATGTACTCTTGTTCTTCTAG
CTTTTAGACTATGGAAAAAACTGAGTGCTTCAGAGTTCGGAAAGAGAAGGGAACACTACACCTG
TGTTGTGGATGAACTGAAGACTTTGCCTGTTCATTTTTTAAATATTATTTTCAGGTCCTTTGCT
TACCAAAGGAAGCCCAATTTCACTCAAATGTTTTGAGAACTGTGTTTGAATAAATGCAAATGAA
AAGAGTAAAAGGCTGGTACAA

hide sequence

RefSeq Acc Id:

XM_022414078 ⟹ XP_022269786

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	18,637,725 - 18,649,898 (-)	NCBI
Dog10K_Boxer_Tasha	34	22,723,459 - 22,735,627 (-)	NCBI

Sequence:

show sequence

GTGTCCCTGTATATTTTGCTAAACATGCATGCATTATTTGTTTAATAGAAGAAAATATATACAG
GGCAAAGAAGTGCCTTCCAGGGGAAACGTTTAAATTAGGAATCCCGTTCTGCTTCCAGAAGTGG
AAGTGCTCATGGATCTGGGAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAAGAT
TCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGATCTGAATCTAGGTCTAGATCCAGAAGAAGTT
CTCGAAGGCATTATACAAGATCAAGATCTCGGTCCCGCTCCCATAGACGATCCCGTAGCAGGTC
TTACAGTCGAGATTATCGAAGACGGCATAGCCACAGTCACTCTCCCATGTCTACTCGCAGGCGT
CATGTTGGGAATCGGGCAAATCCTGACCCCAACTGCTGTCTTGGAGTATTTGGATTGAGCTTGT
ACACTACAGAAAGAGATCTAAGAGAAGTGTTCTCTAAATATGGCCCCATTGCTGACGTGTCTAT
TGTATATGACCAGCAATCTAGGCGTTCCAGAGGATTTGCCTTTGTATATTTTGAAAATGTAGAC
GATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGATGGACGTAGGATCAGAGTTG
ATTTCTCTATAACAAAAAGACCACATACCCCAACACCAGGAATTTACATGGGGAGACCTACCTA
TGGCAGCTCACGCCGTCGGGATTACTATGACAGAGGATATGATCGAGGCTATGATGATCGTGAC
TACTATAGCAGATCATACAGAGGAGGTGGTGGAGGAGGAGGAGGATGGAGAGCTGCTCAAGATA
GGGATCAGATTTACAGAAGGCGGTCACCTTCTCCTTACTATAGTCGTGGAGGATACAGATCGCG
TTCTAGATCTCGATCATACTCACCTCGTCGCTATTAAAGCATGAAGATGAAGACTTTCTGAAAC
CTACCCTAAAGTTGGGATATTGTTTGTGGACAATATTTTTTATTGTCTCCTGTTTAAAAAGTGA
ACAGTGCCTAGTGAAGTTAGGTGACTTTTACACCTTTTATGATGACTACTTTTGGTGGAGTTGA
AATGCTGTTTTCATTCTGCATTTGTGTAGTTCGGTGCTTTGTTCAAAGTTAAGTGTTTTCAGAA
AAGTATGTTTTGCATGTATTTTTTTACAGTCTAAATTTTGACTGCTGAGAAGTTTCTATTGTAC
AAAACTTCATTTAAAAGGTTTTTCTACTGAATCCAGGGTATTCTGAAGATCGAAGCCTGTGTGT
AAAAATGTTACCAAATGGTAAAAAGCAACAATAAAGTTTGGTTTTTACTTTTCTTTCTAACATC
AATGCTTAGCAGAACTGTTCAGATTAGGTTGTCAGTAGTAAATTTCAAGACAAAAATACCCATT
TTTCTCCAATCCATGAAACATACTATACTTACTATACCTGCAACTAAGTGTTAAAAATTATGCT
CTGTAACCCTGTACTGCTAGTATTAGAACTAAAAAATTTTCAATACAGCCAATGCTTAATGCTT
CTATAACTGTGGATTTGTCAGCCTTTATGTAATCTGTATTATATAAAGCAGGGGATAAGAAAAG
AGGTACACAATGTATGCCTTTAAAAGGCTATTTCTTAAAGCTGTTACAAGGGGATAATGGTATT
TCAACTAGTTATCAGCAAGTGACAAATACATTCCACCACAAATGTACTCTTGTTCTTCTAGCTT
TTAGACTATGGAAAAAACTGAGTGCTTCAGAGTTCGGAAAGAGAAGGGAACACTACACCTGTGT
TGTGGATGAACTGAAGACTTTGCCTGTTCATTTTTTAAATATTATTTTCAGGTCCTTTGCTTAC
CAAAGGAAGCCCAATTTCACTCAAATGTTTTGAGAACTGTGTTTGAATAAATGCAAATGAAAAG
AGTAAAAGGCTGGTACAA

hide sequence

RefSeq Acc Id:

XM_038445806 ⟹ XP_038301734

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	18,547,719 - 18,566,554 (-)	NCBI

RefSeq Acc Id:

XM_038445807 ⟹ XP_038301735

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	18,547,719 - 18,566,554 (-)	NCBI

RefSeq Acc Id:

XM_038445808 ⟹ XP_038301736

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	18,547,719 - 18,566,473 (-)	NCBI

RefSeq Acc Id:

XM_038445809 ⟹ XP_038301737

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	18,547,719 - 18,559,871 (-)	NCBI

RefSeq Acc Id:

XM_038445810 ⟹ XP_038301738

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	18,547,719 - 18,566,474 (-)	NCBI

RefSeq Acc Id:

XM_038520000 ⟹ XP_038375928

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	18,574,528 - 18,593,359 (-)	NCBI

RefSeq Acc Id:

XM_038520001 ⟹ XP_038375929

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	18,574,528 - 18,593,359 (-)	NCBI

RefSeq Acc Id:

XM_038520002 ⟹ XP_038375930

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	18,574,528 - 18,593,279 (-)	NCBI

RefSeq Acc Id:

XM_038520003 ⟹ XP_038375931

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	18,574,528 - 18,586,677 (-)	NCBI

RefSeq Acc Id:

XM_038520004 ⟹ XP_038375932

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	18,574,528 - 18,593,279 (-)	NCBI

RefSeq Acc Id:

XM_038583628 ⟹ XP_038439556

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	18,808,612 - 18,827,472 (-)	NCBI

RefSeq Acc Id:

XM_038583629 ⟹ XP_038439557

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	18,808,612 - 18,827,472 (-)	NCBI

RefSeq Acc Id:

XM_038583630 ⟹ XP_038439558

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	18,808,612 - 18,827,392 (-)	NCBI

RefSeq Acc Id:

XM_038583631 ⟹ XP_038439559

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	18,808,612 - 18,820,784 (-)	NCBI

RefSeq Acc Id:

XM_038583632 ⟹ XP_038439560

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	18,808,612 - 18,827,392 (-)	NCBI

RefSeq Acc Id:

XM_038648041 ⟹ XP_038503969

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	18,579,233 - 18,598,088 (-)	NCBI

RefSeq Acc Id:

XM_038648043 ⟹ XP_038503971

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	18,579,233 - 18,598,088 (-)	NCBI

RefSeq Acc Id:

XM_038648044 ⟹ XP_038503972

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	18,579,233 - 18,598,008 (-)	NCBI

RefSeq Acc Id:

XM_038648045 ⟹ XP_038503973

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	18,579,233 - 18,591,400 (-)	NCBI

RefSeq Acc Id:

XM_038648046 ⟹ XP_038503974

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	18,579,233 - 18,598,008 (-)	NCBI

RefSeq Acc Id:

XM_535833 ⟹ XP_535833

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	18,637,725 - 18,656,869 (-)	NCBI
Dog10K_Boxer_Tasha	34	22,723,459 - 22,742,316 (-)	NCBI

Sequence:

show sequence

CCAAAAGGCGGCACAAAAACTAATAAGCACAAGAAAGGAATCAAGGATGGGAAAAAAGGGCATC
TCCTCCTTCCCACCGCCGCGACGCTTTCCCTGGAAAGTTCCAGAAGAGATGAGGGCGTGGCCGG
TGACATCACCACGCCCCTCGGCGACCACCAACCGCAGGCGCAGGCCGTCCAGCACGCTTACTTT
CCCGCCTCGCTGAGACCCAGAGATGGTGGGTGGGGCTGGGCGGGCTGCGAGGCTTACGTCACGT
CCGGTTCCGGACGCGCCGCCGCTAGAAAGGGAAGACCGAGCGCCGAGGGGCGGGGCCAAGAAAG
CGCGCGTTCTGAAAGGGGAGGAGCCGGCTTAAGGAGCGCCGCGTCACGTCCGGCAGACTTAGAG
CCCGTGCGGAGGCGGTGCGGAGCGCTTCGGTACTCGGCGGCTCGGGAGCCCGTGCGTTCTGTGA
GGCTGCGGCGGAGCCTCTATACAGAAGGCGCCAGAGGTTGGCAGCTTCGATTGAAGCCCGTCGA
GCGGCGACAGCAGCTAGGAGTCATGAGCGACAGCGGCGAGCAGAACTACGGCGAGCGGGAATCC
CGTTCTGCTTCCAGAAGTGGAAGTGCTCATGGATCTGGGAAATCTGCAAGGCATACCCCTGCAA
GGTCTCGCTCCAAGGAAGATTCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGATCTGAATCTAG
GTCTAGATCCAGAAGAAGTTCTCGAAGGCATTATACAAGATCAAGATCTCGGTCCCGCTCCCAT
AGACGATCCCGTAGCAGGTCTTACAGTCGAGATTATCGAAGACGGCATAGCCACAGTCACTCTC
CCATGTCTACTCGCAGGCGTCATGTTGGGAATCGGGCAAATCCTGACCCCAACTGCTGTCTTGG
AGTATTTGGATTGAGCTTGTACACTACAGAAAGAGATCTAAGAGAAGTGTTCTCTAAATATGGC
CCCATTGCTGACGTGTCTATTGTATATGACCAGCAATCTAGGCGTTCCAGAGGATTTGCCTTTG
TATATTTTGAAAATGTAGACGATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGA
TGGACGTAGGATCAGAGTTGATTTCTCTATAACAAAAAGACCACATACCCCAACACCAGGAATT
TACATGGGGAGACCTACCTATGGCAGCTCACGCCGTCGGGATTACTATGACAGAGGATATGATC
GAGGCTATGATGATCGTGACTACTATAGCAGATCATACAGAGGAGGTGGTGGAGGAGGAGGAGG
ATGGAGAGCTGCTCAAGATAGGGATCAGATTTACAGAAGGCGGTCACCTTCTCCTTACTATAGT
CGTGGAGGATACAGATCGCGTTCTAGATCTCGATCATACTCACCTCGTCGCTATTAAAGCATGA
AGATGAAGACTTTCTGAAACCTACCCTAAAGTTGGGATATTGTTTGTGGACAATATTTTTTATT
GTCTCCTGTTTAAAAAGTGAACAGTGCCTAGTGAAGTTAGGTGACTTTTACACCTTTTATGATG
ACTACTTTTGGTGGAGTTGAAATGCTGTTTTCATTCTGCATTTGTGTAGTTCGGTGCTTTGTTC
AAAGTTAAGTGTTTTCAGAAAAGTATGTTTTGCATGTATTTTTTTACAGTCTAAATTTTGACTG
CTGAGAAGTTTCTATTGTACAAAACTTCATTTAAAAGGTTTTTCTACTGAATCCAGGGTATTCT
GAAGATCGAAGCCTGTGTGTAAAAATGTTACCAAATGGTAAAAAGCAACAATAAAGTTTGGTTT
TTACTTTTCTTTCTAACATCAATGCTTAGCAGAACTGTTCAGATTAGGTTGTCAGTAGTAAATT
TCAAGACAAAAATACCCATTTTTCTCCAATCCATGAAACATACTATACTTACTATACCTGCAAC
TAAGTGTTAAAAATTATGCTCTGTAACCCTGTACTGCTAGTATTAGAACTAAAAAATTTTCAAT
ACAGCCAATGCTTAATGCTTCTATAACTGTGGATTTGTCAGCCTTTATGTAATCTGTATTATAT
AAAGCAGGGGATAAGAAAAGAGGTACACAATGTATGCCTTTAAAAGGCTATTTCTTAAAGCTGT
TACAAGGGGATAATGGTATTTCAACTAGTTATCAGCAAGTGACAAATACATTCCACCACAAATG
TACTCTTGTTCTTCTAGCTTTTAGACTATGGAAAAAACTGAGTGCTTCAGAGTTCGGAAAGAGA
AGGGAACACTACACCTGTGTTGTGGATGAACTGAAGACTTTGCCTGTTCATTTTTTAAATATTA
TTTTCAGGTCCTTTGCTTACCAAAGGAAGCCCAATTTCACTCAAATGTTTTGAGAACTGTGTTT
GAATAAATGCAAATGAAAAGAGTAAAAGGCTGGTACAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013965900	(Get FASTA)	NCBI Sequence Viewer
	XP_013965901	(Get FASTA)	NCBI Sequence Viewer
	XP_022269785	(Get FASTA)	NCBI Sequence Viewer
	XP_022269786	(Get FASTA)	NCBI Sequence Viewer
	XP_038301734	(Get FASTA)	NCBI Sequence Viewer
	XP_038301735	(Get FASTA)	NCBI Sequence Viewer
	XP_038301736	(Get FASTA)	NCBI Sequence Viewer
	XP_038301737	(Get FASTA)	NCBI Sequence Viewer
	XP_038301738	(Get FASTA)	NCBI Sequence Viewer
	XP_038375928	(Get FASTA)	NCBI Sequence Viewer
	XP_038375929	(Get FASTA)	NCBI Sequence Viewer
	XP_038375930	(Get FASTA)	NCBI Sequence Viewer
	XP_038375931	(Get FASTA)	NCBI Sequence Viewer
	XP_038375932	(Get FASTA)	NCBI Sequence Viewer
	XP_038439556	(Get FASTA)	NCBI Sequence Viewer
	XP_038439557	(Get FASTA)	NCBI Sequence Viewer
	XP_038439558	(Get FASTA)	NCBI Sequence Viewer
	XP_038439559	(Get FASTA)	NCBI Sequence Viewer
	XP_038439560	(Get FASTA)	NCBI Sequence Viewer
	XP_038503969	(Get FASTA)	NCBI Sequence Viewer
	XP_038503971	(Get FASTA)	NCBI Sequence Viewer
	XP_038503972	(Get FASTA)	NCBI Sequence Viewer
	XP_038503973	(Get FASTA)	NCBI Sequence Viewer
	XP_038503974	(Get FASTA)	NCBI Sequence Viewer
	XP_535833	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000062612.1
	ENSCAFP00030011275.1
	ENSCAFP00040041283.1
	ENSCAFP00845026541.1
	ENSCAFP00845026623
	ENSCAFP00845026623.1

RefSeq Acc Id:

XP_013965900 ⟸ XM_014110425

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSS
RRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLY
TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD
FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDR
DQIYRRSPSPYYSRGGYRSRSRSRSYSPRRY

hide sequence

RefSeq Acc Id:	XP_535833 ⟸ XM_535833
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MKY8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSS RRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLY TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRAAQDR DQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY hide sequence

RefSeq Acc Id:	XP_013965901 ⟸ XM_014110426
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV YFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDR GYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY hide sequence

RefSeq Acc Id:	XP_022269785 ⟸ XM_022414077
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV YFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDR GYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY hide sequence

RefSeq Acc Id:	XP_022269786 ⟸ XM_022414078
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV YFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDR GYDDRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY hide sequence

Ensembl Acc Id:

ENSCAFP00000062612 ⟸ ENSCAFT00000074188

Ensembl Acc Id:

ENSCAFP00000019680 ⟸ ENSCAFT00000021194

Ensembl Acc Id:

ENSCAFP00000053953 ⟸ ENSCAFT00000065351

Ensembl Acc Id:

ENSCAFP00000043657 ⟸ ENSCAFT00000081553

RefSeq Acc Id:	XP_038375929 ⟸ XM_038520001
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038375928 ⟸ XM_038520000
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038375932 ⟸ XM_038520004
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038375930 ⟸ XM_038520002
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038375931 ⟸ XM_038520003
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038503971 ⟸ XM_038648043
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038503969 ⟸ XM_038648041
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038503974 ⟸ XM_038648046
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038503972 ⟸ XM_038648044
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038503973 ⟸ XM_038648045
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038301735 ⟸ XM_038445807
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038301734 ⟸ XM_038445806
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MKY8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038301738 ⟸ XM_038445810
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038301736 ⟸ XM_038445808
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038301737 ⟸ XM_038445809
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439557 ⟸ XM_038583629
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038439556 ⟸ XM_038583628
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MKY8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439560 ⟸ XM_038583632
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439558 ⟸ XM_038583630
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439559 ⟸ XM_038583631
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P5X2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845026541 ⟸ ENSCAFT00845033918

Ensembl Acc Id:

ENSCAFP00845026623 ⟸ ENSCAFT00845034019

Protein Domains

RRM

Promoters

RGD ID:

13688909

Promoter ID:

EPDNEW_C6975

Type:

multiple initiation site

Name:

TRA2B_1

Description:

transformer 2 beta homolog

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	18,656,489 - 18,656,549	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000013345	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007005	UniProtKB/TrEMBL
	ENSCAFG00040025348	UniProtKB/TrEMBL
	ENSCAFG00845019221	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000074188.2	UniProtKB/TrEMBL
	ENSCAFT00030012904.1	UniProtKB/TrEMBL
	ENSCAFT00040047286.1	UniProtKB/TrEMBL
	ENSCAFT00845033918.1	UniProtKB/TrEMBL
	ENSCAFT00845034019	ENTREZGENE
	ENSCAFT00845034019.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RBM	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
NCBI Gene	TRA2B	ENTREZGENE
PANTHER	TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8C0MKY8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TVS3_CANLF	UniProtKB/TrEMBL
	A0A8I3P5X2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S0Y4_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:47759	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-04-12	TRA2B	transformer 2 beta homolog		transformer 2 beta homolog (Drosophila)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD