Plsm4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Plsm4 (Polydactyly-luxate syndrome (PLS) morphotypes QTL 4) Rattus norvegicus

Symbol: Plsm4
Name: Polydactyly-luxate syndrome (PLS) morphotypes QTL 4
RGD ID: 724561
Trait: forelimb integrity trait   (VT:0010562)    
Measurement Type: front foot phalanges count   (CMO:0001947)    
LOD Score: Not Available
P Value: 3.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21154,457,534 - 86,241,447RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01157,858,810 - 90,463,843RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01157,874,854 - 93,518,069RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41156,625,623 - 87,759,784RGDRGSC3.4
RGSC_v3.11156,683,212 - 87,800,381RGD
Cross Type: intercross
Strains Crossed: SHR/Ola BN-Lx/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
polydactyly  (QTM)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
polydactyly  (IDA)
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN-Lx/Cub  (IEA)
SHR/Ola  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Recombinant inbred and congenic strains of the rat for genetic analysis of limb morphogenesis. Kren V, etal., Folia Biol (Praha) 1996;42(4):159-66.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2499Dgkgdiacylglycerol kinase, gamma117838421278579158Rat
2521Drd3dopamine receptor D3115687968956931901Rat
68422Cldn1claudin 1117442156974436728Rat
2052AdprhADP-ribosylarginine hydrolase116229983162306170Rat
3703Slc25a1solute carrier family 25 member 1118305576483058781Rat
68431Cldn5claudin 5118221282282214248Rat
2724Gp5glycoprotein V (platelet)117044361370446705Rat
71102Lsamplimbic system-associated membrane protein115854753360717328Rat
2328CebpdCCAAT/enhancer binding protein delta118476467084765808Rat
70551Lrrc15leucine rich repeat containing 15117046981770484268Rat
3104Cd200Cd200 molecule115541016655437527Rat
619886Tra2btransformer 2 beta117878888078807252Rat
70982Gsk3bglycogen synthase kinase 3 beta116249899762648665Rat
69293Fetubfetuin B117808215878093022Rat
61972Slc15a2solute carrier family 15 member 2116401418264043228Rat
2137Apodapolipoprotein D116943126169452306Rat
3060Mcm4minichromosome maintenance complex component 4118525844385272144Rat
70500Mapk1mitogen activated protein kinase 1118395781384023629Rat
3761Sstsomatostatin117695689676958173Rat
2361Clcn2chloride voltage-gated channel 2118019774180211657Rat
70515Pcyt1aphosphate cytidylyltransferase 1A, choline116831386068357828Rat
2379Comtcatechol-O-methyltransferase118256805282587642Rat
2980Kng2kininogen 2117791387677936247Rat
69057Nr1i2nuclear receptor subfamily 1, group I, member 2116246021362496665Rat
3722Snai2snail family transcriptional repressor 2118618278886186203Rat
628714Cd86CD86 molecule116414219364200816Rat
62071Gap43growth associated protein 43115837637158470047Rat
708438Gpr156G protein-coupled receptor 156116272263262815402Rat
708547Muc13mucin 13, cell surface associated116695720866980264Rat
727841Ccdc50coiled-coil domain containing 50117333279873395333Rat
620322Cldn16claudin 16117429029874309588Rat
2893Il1rapinterleukin 1 receptor accessory protein117406299974199530Rat
708464Atg3autophagy related 3115562491455653249Rat
620225Snap29synaptosome associated protein 29118357847983608953Rat
621331Muc4mucin 4, cell surface associated116800824568053242Rat
71014Adcy5adenylate cyclase 5116547161265618877Rat
620213Masp1MBL associated serine protease 1117733479477405271Rat
727971Klhl24kelch-like family member 24118084362180877649Rat
727977Uts2burotensin 2B117342438573439429Rat
619822Ufd1ubiquitin recognition factor in ER associated degradation 1118216161882185107Rat
61960Txnrd2thioredoxin reductase 2118251999682568156Rat
620135Ap2m1adaptor related protein complex 2 subunit mu 1118035530780364218Rat
69301Tagln3transgelin 3115509988755113457Rat
62081Hes1hes family bHLH transcription factor 1117070576370708176Rat
628730Slc12a8solute carrier family 12, member 8116711687667266548Rat
621213Pi4kaphosphatidylinositol 4-kinase alpha118360914883726876Rat
628869Itgb5integrin subunit beta 5116682842866944231Rat
628879Eaf2ELL associated factor 2116396020064004610Rat
621099Ppp1r2protein phosphatase 1, regulatory (inhibitor) subunit 2116947267669494468Rat
621763Septin5septin 5118237360182379393Rat
619808Hrghistidine-rich glycoprotein117805448878069402Rat
621441Ehhadhenoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase117924192779275173Rat
61837Cd200r1CD200 receptor 1115588693755921217Rat
621659Sec22aSEC22 homolog A, vesicle trafficking protein116540258365462329Rat
620416Dnm1ldynamin 1-like118458121684632382Rat
619854Serpind1serpin family D member 1118366451783675593Rat
1303254Zdhhc23zinc finger DHHC-type palmitoyltransferase 23115671870256735063Rat
2277Casrcalcium-sensing receptor116423525164304811Rat
708411Camk2n2calcium/calmodulin-dependent protein kinase II inhibitor 2118028970280290829Rat
735064Kpna1karyopherin subunit alpha 1116471584464774647Rat
2314Cd80Cd80 molecule116225454362293414Rat
1305170Cpn2carboxypeptidase N subunit 2117048605470495937Rat
1304865Muc20mucin 20, cell surface associated116798781668001496Rat
3243P2rx6purinergic receptor P2X 6118343992283450449Rat
628748Adipoqadiponectin, C1Q and collagen domain containing117772191277735644Rat
1304951Tssk2testis-specific serine kinase 2118308657883087933Rat
708380Eif2b5eukaryotic translation initiation factor 2B subunit epsilon118039443380404468Rat
70488Tfrctransferrin receptor116816341368185257Rat
708429Golgb1golgin B1116384317963900665Rat
62063Zfp148zinc finger protein 148116727645567385803Rat
620810Rtn4rreticulon 4 receptor118284430982869251Rat
620863Tp63tumor protein p63117483885875049764Rat
620870Hspbap1HSPB1 associated protein 1116494008964994753Rat
1304604Senp5SUMO specific peptidase 5116878469968819569Rat
1306288Klhl22kelch-like family member 22118319089183231746Rat
2505Dlg1discs large MAGUK scaffold protein 1116891188369103230Rat
735226Popdc2popeye domain containing 2116235184362398688Rat
620131Bdh13-hydroxybutyrate dehydrogenase 1116930253469343173Rat
621261Pla1aphospholipase A1 member A116232011262357779Rat
621050Gp1bbglycoprotein Ib platelet subunit beta118237821682379393Rat
621865Kalrnkalirin, RhoGEF kinase116619815566803166Rat
620548Cox17cytochrome c oxidase copper chaperone COX17116240073362406507Rat
631363Ppm1fprotein phosphatase, Mg2+/Mn2+ dependent, 1F118406442284094410Rat
1304655Tmprss7transmembrane serine protease 7115512799255166597Rat
1304568P3h2prolyl 3-hydroxylase 2117463426774775422Rat
620181Chrdchordin118017199480181166Rat
1307806Upk1buroplakin 1B116195368761991029Rat
1306013Scarf2scavenger receptor class F, member 2118317595683187415Rat
1306018Car15carbonic anhydrase 15118314715583150101Rat
1307521Klhl6kelch-like family member 6118097091781010593Rat
70913Abcc5ATP binding cassette subfamily C member 5118047380980567257Rat
69421Ccdc80coiled-coil domain containing 80115568516555718827Rat
1305433Gramd1cGRAM domain containing 1C115663322956718570Rat
1306365Dgcr8DGCR8 microprocessor complex subunit118270467382737251Rat
708378Senp2SUMO specific peptidase 2117898142979018274Rat
1306337Hacd23-hydroxyacyl-CoA dehydratase 2116566767165762903Rat
1306436Rabl3RAB, member of RAS oncogene family-like 3116315328163182240Rat
1306995Tex55testis expressed 55116192730461942666Rat
1306899Fyttd1forty-two-three domain containing 1116787796767907500Rat
1302997Stfa3l1stefin A3-like 1116460868364615902Rat
1306421Tmem39atransmembrane protein 39a116216063162189964Rat
1305752Psmd2proteasome 26S subunit ubiquitin receptor, non-ATPase 2118024836480258991Rat
1306346Ubxn7UBX domain protein 7116842789668460100Rat
1307440Lrrc58leucine rich repeat containing 58116285050762862829Rat
13080652610318N02RiklRIKEN cDNA 2610318N02 gene like118387917883895877Rat
1308567Wdr5bWD repeat domain 5B116471094564712804Rat
1304754Hcls1hematopoietic cell specific Lyn substrate 1116381748263840943Rat
1307352Tssk1btestis-specific serine kinase 1B118309093083092353Rat
1306533Pkp2plakophilin 2118466178384727730Rat
1304550BocBOC cell adhesion associated, oncogene regulated115612269756198060Rat
1307072Ndufb4NADH:ubiquinone oxidoreductase subunit B4116306372363070426Rat
61953Pak2p21 (RAC1) activated kinase 2116870794068768816Rat
727838Ube2v2ubiquitin conjugating enzyme E2 V2118530452885338430Rat
1307373Dnajb11DnaJ heat shock protein family (Hsp40) member B11117815175078168259Rat
1305333Gsc2goosecoid homeobox 2118307078483075874Rat
1310025Gtpbp8GTP-binding protein 8 (putative)115594577855955743Rat
1305905Slc7a4solute carrier family 7, member 4118343509383439078Rat
1307734Tbx1T-box transcription factor 1118240927582419058Rat
1305539Cfap91cilia and flagella associated protein 91116241361362457281Rat
620163Fgf12fibroblast growth factor 12117199715172564757Rat
1305338Hic2HIC ZBTB transcriptional repressor 2118373707583789554Rat
1309516Nectin3nectin cell adhesion molecule 3115436271254469351Rat
708357Fgd4FYVE, RhoGEF and PH domain containing 4118439998984551013Rat
1306028Aifm3apoptosis inducing factor, mitochondria associated 3118350485983523630Rat
1305422Rubcnrubicon autophagy regulator116790753467964347Rat
1306655ArvcfARVCF, delta catenin family member118258813782645832Rat
1306004Alg3ALG3, alpha-1,3- mannosyltransferase118030048780306014Rat
68955Fstl1follistatin-like 1116289539162948581Rat
1306093Arhgap31Rho GTPase activating protein 31116203863562151564Rat
1307792Ildr1immunoglobulin-like domain containing receptor 1116408577464118760Rat
1304790Fam43afamily with sequence similarity 43, member A117012825370131401Rat
1305602Ephb3Eph receptor B3117984066879859345Rat
1311100Slc51asolute carrier family 51 member A116829908668313485Rat
1309089Lsg1large 60S subunit nuclear export GTPase 1117013291970168526Rat
1310521Ranbp1RAN binding protein 1118274260382750836Rat
1307289Pigxphosphatidylinositol glycan anchor biosynthesis, class X116868712668703067Rat
1560559Teddm3transmembrane epididymal family member 3117998898479990143Rat
1307294Osbpl11oxysterol binding protein-like 11116753366967616795Rat
1309443Vps8VPS8 subunit of CORVET complex117940223679634234Rat
1359376Kng1kininogen 1117781275777835555Rat
1359380Timmdc1translocase of inner mitochondrial membrane domain containing 1116222899062259389Rat
1309781Fbxo40F-box protein 40116379445263812697Rat
1310468Abcf3ATP binding cassette subfamily F member 3118034047680352211Rat
1308361Ube2l3ubiquitin-conjugating enzyme E2L 3118379772283838862Rat
1333751Or2aj4bolfactory receptor family 2 subfamily AJ member 4B118124605081246994Rat
1559643Mb21d2Mab-21 domain containing 2117182574871924770Rat
1310418Trmt2atRNA methyltransferase 2 homolog A118273768982742423Rat
1311861Fbxo45F-box protein 45116855143068567053Rat
1333712Or2l13colfactory receptor family 2 subfamily L member 13C118135126881352206Rat
1333622Or2aj4olfactory receptor family 1 subfamily O member 4118127860581279546Rat
1311465Lmlnleishmanolysin like peptidase116765624167725889Rat
1308126Mzt2bmitotic spindle organizing protein 2B118502412085031960Rat
1310771Nrrosnegative regulator of reactive oxygen species116862864168646152Rat
1333362Or2l13olfactory receptor family 2 subfamily L member 13118140019781401135Rat
1310892Spag6lsperm associated antigen 6-like118417362884269374Rat
1310915Mylkmyosin light chain kinase116578300866030239Rat
1309014Zdhhc19zinc finger DHHC-type palmitoyltransferase 19116827784768289110Rat
1311606IqcgIQ motif containing G116773011767771170Rat
1311458Nepronucleolus and neural progenitor protein115595826555970432Rat
1308982Prkdcprotein kinase, DNA-activated, catalytic subunit118504079085258357Rat
1309225Eif4a2eukaryotic translation initiation factor 4A2117776412677770810Rat
1310567Dgcr2DiGeorge syndrome critical region gene 2118309396183144507Rat
1306200Lrch3leucine rich repeats and calponin homology domain containing 3116777249967872269Rat
1309795PolqDNA polymerase theta116367379663775905Rat
1310069Iqcb1IQ motif containing B1116390559563960141Rat
1307880B4galt4beta-1,4-galactosyltransferase 4116199580762021751Rat
1308218Ess2ess-2 splicing factor homolog118307589383085849Rat
1307534Parp9poly (ADP-ribose) polymerase family, member 9116478097764814995Rat
1310080Ccdc116coiled-coil domain containing 116118384270783850607Rat
1309390Dgcr6DiGeorge syndrome critical region gene 6118292772582932823Rat
1306226Tprg1tumor protein p63 regulated 1117532247075449907Rat
1309484Ppil2peptidylprolyl isomerase like 2118389771983920970Rat
1309485Plaat1phospholipase A and acyltransferase 1117151749271537142Rat
1306248Poglut1protein O-glucosyltransferase 1116219860062226446Rat
1305957Tnk2tyrosine kinase, non-receptor, 2116811472568154254Rat
1310939Slc49a4solute carrier family 49 member 4116499562965068929Rat
1310944Naa50N(alpha)-acetyltransferase 50, NatE catalytic subunit115653836656560842Rat
1307831Stfa3stefin A3116435372264358864Rat
1308154Xxylt1xyloside xylosyltransferase 1116965848169790938Rat
1307560Med15mediator complex subunit 15118328072283356006Rat
1308531CrklCRK like proto-oncogene, adaptor protein118352878883563214Rat
1308155Meltfmelanotransferrin116888444668906300Rat
1308757Hgdhomogentisate 1, 2-dioxygenase116308675063138325Rat
1308758Igsf11immunoglobulin superfamily, member 11116173313961884059Rat
1308084Abhd10abhydrolase domain containing 10, depalmitoylase115508127355095044Rat
1309100Lztr1leucine zipper like post translational regulator 1118348771783503896Rat
1306927Atp13a4ATPase 13A4117122219671359933Rat
1306974Rtp4receptor (chemosensory) transporter protein 4117723734177249194Rat
1306792Atp13a5ATPase 13A5117137638871515789Rat
1307107Pigzphosphatidylinositol glycan anchor biosynthesis, class Z116883184768851798Rat
1309345Bcl6BCL6, transcription repressor117685409076877389Rat
1308834Dvl3dishevelled segment polarity protein 3118036544680382641Rat
1306191Parlpresenilin associated, rhomboid-like118059405980620506Rat
1309603Cstacystatin A116462048364631488Rat
1309604Tbccd1TBCC domain containing 1117816838678205314Rat
2075Ahsgalpha-2-HS-glycoprotein117812138878127998Rat
1310535LppLIM domain containing preferred translocation partner in lipoma117578732676426646Rat
1308061Thap7THAP domain containing 7118348295883486136Rat
1309468Top3bDNA topoisomerase III beta118409701884125474Rat
1308875Zdhhc8zinc finger DHHC-type palmitoyltransferase 8118275511082769280Rat
1310674Smpd4sphingomyelin phosphodiesterase 4118336253483386257Rat
1310675Ropn1rhophilin associated tail protein 1116609785466127148Rat
1308914Sema5bsemaphorin 5B116510253265225456Rat
1311561Stxbp5lsyntaxin binding protein 5L116333466763654270Rat
1307928Lamp3lysosomal-associated membrane protein 3118115349181224643Rat
1303106Stfa2l1stefin A2-like 1116444079264444858Rat
1310348Tango2transport and golgi organization 2 homolog118264597882692574Rat
1309590Etv5ETS variant transcription factor 5117860861878666221Rat
1305614Igf2bp2insulin-like growth factor 2 mRNA binding protein 2117887440278974392Rat
1306144Eif4g1eukaryotic translation initiation factor 4 gamma 1118022191980241958Rat
1310142Rfc4replication factor C subunit 4117774964277764123Rat
1310054Qtrt2queuine tRNA-ribosyltransferase accessory subunit 2115680641756837239Rat
1333258Or2m12olfactory receptor family 2 subfamily M member 12118148697881487919Rat
1309763Snx4sorting nexin 4116746087267518143Rat
1306851Gtf2e1general transcription factor IIE subunit 1116318207363215349Rat
1563782Ccdc188coiled-coil domain containing 188118276973582772062Rat
1562939Acap2ArfGAP with coiled-coil, ankyrin repeat and PH domains 2116953848769654156Rat
1303039Ece2endothelin-converting enzyme 2118025913080278446Rat
1303110Ostnosteocrin117344216773478498Rat
1562415Rps26-ps13ribosomal protein S26, pseudogene 13117035922770359796Rat
1563535Myl6-ps5myosin light chain 6, pseudogene 5117644843876448787Rat
1563657Rimbp3RIMS binding protein 3118378381683789391Rat
1564585Ctdsp1-ps1CTD small phosphatase 1, pseudogene 1117713290877133863Rat
1564601Vpreb1bV-set pre-B cell surrogate light chain 1B118300939683010106Rat
1563387Cd200r1lCD200 receptor 1-like115584263255860914Rat
1563597Dynlt2bdynein light chain Tctex-type 2B116835913868367573Rat
1563956Rpl12l2ribosomal protein L12 like 2118016920580169831Rat
1561203Polr2hRNA polymerase II, I and III subunit H118019201780197468Rat
1559546Wdr53WD repeat domain 53116854264768551148Rat
1566036Spidrscaffold protein involved in DNA repair118476659385007597Rat
1563191TigitT cell immunoreceptor with Ig and ITIM domains115702902457046627Rat
1563170Gmncgeminin coiled-coil domain containing117383625573847698Rat
1563504Plcxd2phosphatidylinositol-specific phospholipase C, X domain containing 2115480097754853348Rat
1560486Tm4sf19transmembrane 4 L six family member 19116837294568386192Rat
1562339C11h3orf70similar to human chromosome 3 open reading frame 70117934585779396140Rat
1311696Yars2tyrosyl-tRNA synthetase 2118463235084638138Rat
621352Cep19centrosomal protein 19116867786968687117Rat
1560980Rtp1receptor (chemosensory) transporter protein 1117742298277425498Rat
1310490Parp14poly (ADP-ribose) polymerase family, member 14116490284864934916Rat
1303280BtlaB and T lymphocyte associated115556368355588187Rat
1559616Sidt1SID1 transmembrane family, member 1115636278856459939Rat
1359236Pdia5protein disulfide isomerase family A, member 5116527215265359087Rat
1561232Krt8-ps1keratin 8, pseudogene 1116307326963075284Rat
708423Opa1OPA1, mitochondrial dynamin like GTPase117110810071185170Rat
70955B3gnt5UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5118114110281153206Rat
1561227Map3k13mitogen-activated protein kinase kinase kinase 13117909408779235181Rat
1310729Spice1spindle and centriole associated protein 1115628929156332382Rat
1309075Slc9c1solute carrier family 9 member C1115521177455278285Rat
1359227YdjcYdjC chitooligosaccharide deacetylase homolog118383217783844691Rat
1559972Rpl27al7ribosomal protein L27A like 7117878105878781581Rat
1334380Or2l5olfactory receptor family 2 subfamily L member 5118137588681376824Rat
1311908Umpsuridine monophosphate synthetase116680610766816520Rat
1563835Rpl27l7ribosomal protein L27 like 7116191118061911639Rat
1560337Polr2m-ps4RNA polymerase II subunit M, pseudogene 4118545865285459753Rat
1565444Mrpl40mitochondrial ribosomal protein L40118213339882139234Rat
1586963Cyp2ab1cytochrome P450, family 2, subfamily ab, polypeptide 1118058263380591217Rat
1585844Sdf2l1stromal cell-derived factor 2-like 1118387265983874902Rat
3676St6gal1ST6 beta-galactoside alpha-2,6-sialyltransferase 1117752683777653474Rat
1564491Vwa5b2von Willebrand factor A domain containing 5B2118030606780323220Rat
1584950Hirahistone cell cycle regulator118202446982133212Rat
1562186Stfa2stefin A2116454445164549450Rat
1562500Smco1single-pass membrane protein with coiled-coil domains 1116851211368514999Rat
1560102Map6d1MAP6 domain containing 1118073414880740377Rat
1560175Usf3upstream transcription factor family member 3115647073856529736Rat
1562189Ccdc14coiled-coil domain containing 14116605206366087915Rat
1565413Rps11-ps13ribosomal protein S11, pseudogene 13116299121062991770Rat
1566314Ccdc191coiled-coil domain containing 191115673565556806372Rat
1564641Heg1heart development protein with EGF-like domains 1116700695467095020Rat
1560387Zbtb20zinc finger and BTB domain containing 20115705212957791214Rat
1564582Mix23mitochondrial matrix import factor 23116466071164681000Rat
1565541Elob-ps6elongin B, pseduogene 6117061778170618341Rat
1559942Cfap44cilia and flagella associated protein 44115619977256283964Rat
1584953Hspa8-ps7heat shock protein family A (Hsp70) member 8, pseudogene 7118125631581258243Rat
1584955Prkaa1-ps2protein kinase AMP-activated catalytic subunit alpha 1, pseudogene 2117788197177883466Rat
1563737Tmem44transmembrane protein 44117018112070216958Rat
1565144Dtx3ldeltex E3 ubiquitin ligase 3L116481492664824539Rat
1564361Slc35a5solute carrier family 35, member A5115565337655674476Rat
1565722Rtp2receptor (chemosensory) transporter protein 2117691790476930760Rat
1565297Ranbp1l1RAN binding protein 1 like 1116464663464647446Rat
1566176Yeats2YEATS domain containing 2118074313480829253Rat
1565249Cd96CD96 molecule115470229054776618Rat
1560676Stfa2l2stefin A2-like 2116449815164500576Rat
1590262Traf4-ps1Tnf receptor associated factor 4, pseudogene 1115527834755280231Rat
1590418Fcf1-ps7Fcf1 rRNA-processing protein, pseudogene 7118470437584705186Rat
1585930Tiprl-ps1TOR signaling pathway regulator, pseudogene 1118013607080137293Rat
1589781Eef1a1-ps11eukaryotic translation elongation factor 1 alpha 1, pseudogene 11117363323773634788Rat
1591402Phldb2pleckstrin homology-like domain, family B, member 2115485917355078212Rat
1592279Casp6-ps1caspase 6, pseudogene 1116489204564897556Rat
1591093Mta2-ps1metastasis associated 1 family, member 2, pseudogene 1116508452065086381Rat
1588558Vpreb1aV-set pre-B cell surrogate light chain 1A118412696984127846Rat
1590881Atp13a3ATPase 13A3117036499870442005Rat
1590883Fam162afamily with sequence similarity 162, member A116468097864709865Rat
1586127Prdx6-ps3peroxiredoxin 6, pseudogene 3116191817161919429Rat
1590533Snw1-ps3SNW domain containing 1, pseudogene 3117974307079744816Rat
1590201Cd200l1CD200 molecule like 1115535043355401528Rat
1587016Tmem191ctransmembrane protein 191C118372615583728926Rat
1583711Ccnb1ip1-ps2cyclin B1 interacting protein 1, pseudogene 2117794408177945086Rat
1583712Tnk1-ps1tyrosine kinase, non-receptor, 1, pseudogene 1115789125957893134Rat
1561572Sf3a2-ps1splicing factor 3A subunit 2, pseudogene 1117576854875769907Rat
1587483Crygscrystallin, gamma S117820717078212273Rat
1585168Rnf168ring finger protein 168116848631368508296Rat
1590928Cdc45cell division cycle 45118218542782210630Rat
1590932Prodhproline dehydrogenase118291004382927305Rat
1588214Ccdc74acoiled-coil domain containing 74A118335588883360269Rat
1591333C11h3orf52similar to human chromosome 3 open reading frame 52115516698655192273Rat
1596124Chchd2l2-ps3coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2, pseudogene 3116948069869481154Rat
1592849Liphlipase H117903222979081625Rat
1595717C11h22orf39similar to human chromosome 22 open reading frame 39118215599282160235Rat
1592613Hnrnpa1-ps30heterogeneous nuclear ribonucleoprotein A1, pseudogene 30115463775754691446Rat
1590252Cd200l2CD200 molecule like 2115527985355326753Rat
1594590Kng2l1kininogen 2-like 1117797879578002976Rat
1596034Cyld-ps2CYLD lysine 63 deubiquitinase, pseudogene 2117170499271713933Rat
1594835Rngtt-ps1RNA guanylyltransferase and 5'-phosphatase, pseudogene 1116406295964064855Rat
1591692Tmem41atransmembrane protein 41a117908400579090613Rat
1594165Gnb1lG protein subunit beta 1 like118242530182507836Rat
1594108Ldha-ps15lactate dehydrogenase A, pseudogene 15117802245478023501Rat
1594822Csta3cystatin A family member 3116437420264381603Rat
1588683Psme3-ps4proteasome activator subunit 3, pseudogene 4117877350878774583Rat
1594548Clxncalaxin118597723185996561Rat
1594092Hrg l1histidine-rich glycoprotein like 1117803937178049353Rat
1591321Gcsamgerminal center-associated, signaling and motility115519575755207011Rat
1590173Paics-ps6phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 6115554545255546806Rat
1596188Ncbp2nuclear cap binding protein subunit 2116882102668829863Rat
1596464Atp6v1aATPase H+ transporting V1 subunit A115656144456614694Rat
1597039Rplp0-ps12ribosomal protein lateral stalk subunit P0, pseudogene 12116818532968194901Rat
1598124Rps7-ps3ribosomal protein S7, pseudogene 3118043776080438362Rat
1594670Pabpc4-ps2poly(A) binding protein, cytoplasmic 4, pseudogene 2117439745074399183Rat
2319134Lrrc74bleucine rich repeat containing 74B118345058883468906Rat
2319156Mast2-ps1microtubule associated serine/threonine kinase 2, pseudogene 1117749966677502443Rat
2318135Ppp2cal1protein phosphatase 2 catalytic subunit alpha like 1118227828882280159Rat
2318744Rps15al2ribosomal protein S15A-like 2118040865680409118Rat
2318248LOC10036583940S ribosomal protein S3a-like117614280076143706Rat
2318335Hmgn2-ps1high mobility group nucleosomal binding domain 2, pseudogene 1117832119978321970Rat
2319568Iglc1immunoglobulin lambda constant 1118194796681949822Rat
2319088Cnbp-ps1CCHC-type zinc finger, nucleic acid binding protein, pseudogene 1118412917384130147Rat
2322069Fam131afamily with sequence similarity 131, member A118021157780221527Rat
2321291Ypel1yippee-like 1118392179983936409Rat
2322856Tmem207transmembrane protein 207117425104274270180Rat
2322462Rtraf-ps1RNA transcription, translation and transport factor, pseudogene 1117506032475216590Rat
2321725Nudt2-ps1nudix hydrolase 2, pseudogene 1117979752679798400Rat
2322514Abt1-ps1activator of basal transcription 1, pseudogene 1117456872274569685Rat
2322532Il13ra1-ps1interleukin 13 receptor subunit alpha 1, pseudogene 1117125503571258723Rat
2321873Lamtor2-ps2late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, pseudogene 2118340635783406788Rat
2321140Igll1immunoglobulin lambda-like polypeptide 1118413884784142238Rat
2323715Cstdc4cystatin domain containing 4116448057164485848Rat
2323795Rpl35aribosomal protein L35A116772603167729953Rat
2325380Mir185microRNA 185118266471682664795Rat
2323897Stfa3l-ps1stefin A3 like, pseudogene 1116439580964400614Rat
2325438Mir568microRNA 568115705397857054073Rat
2325461Mir28microRNA 28117597552375975608Rat
2325484Mir1224microRNA 1224118030690280306986Rat
2325503Mir301bmicroRNA 301b118387981683879893Rat
2325573Mir130bmicroRNA 130b118388016383880244Rat
6489863LOC100911962uncharacterized LOC100911962117824763278249722Rat
6490131Rps2-ps8ribosomal protein S2, pseudogene 8116464004564640815Rat
6489505LOC100912028olfactory receptor 19-like118432299184323920Rat
6484481Igll2immunoglobulin lambda likepolypeptide 2118155468081911935Rat
6491049Stfa2l3stefin A2-like 3116458840164593418Rat
6486401Syncrip-ps1synaptotagmin binding, cytoplasmic RNA interacting protein, pseudogene 1115587732455878959Rat
6499341LOC100910319uncharacterized LOC100910319117581962075823992Rat
7489022Mir1306microRNA 1306118270965182709723Rat
7489032Mir6323microRNA 6323118105206581052169Rat
7525828LOC102555338uncharacterized LOC102555338118277201982781088Rat
7504264LOC102552450uncharacterized LOC102552450115497595854980672Rat
7542563LOC102548576uncharacterized LOC102548576117339851173403897Rat
7542669LOC102554403uncharacterized LOC102554403117064419670656791Rat
7508589LOC102552083uncharacterized LOC102552083117126345071269923Rat
7510056LOC102551038uncharacterized LOC102551038116546293865491276Rat
7503836Ewsr1-ps3EWS RNA-binding protein 3118099500380997069Rat
7516849LOC102550875uncharacterized LOC102550875118558747985594516Rat
7654032LOC102547398uncharacterized LOC102547398118046153480468553Rat
7654125Riox2-ps1ribosomal oxygenase 2, pseudogene 1115589665455898921Rat
7640211LOC102550974uncharacterized LOC102550974116926148069271169Rat
7656435LOC102553356uncharacterized LOC102553356117671128176721105Rat
7595638LOC102553680uncharacterized LOC102553680116980454269837672Rat
7642671LOC102554451uncharacterized LOC102554451117569607875714051Rat
7644981St6gal1lST6 beta-galactoside alpha-2,6-sialyltransferase 1 like117765253077658971Rat
7555728LOC102548792uncharacterized LOC102548792117018599870189950Rat
7568858LOC102553750uncharacterized LOC102553750117659112176596688Rat
7569107LOC102547306uncharacterized LOC102547306117065946470675176Rat
7594145LOC102551884uncharacterized LOC102551884115574680755767560Rat
7573197LOC102551589uncharacterized LOC102551589118025909080266788Rat
7546617LOC102550088uncharacterized LOC102550088118005471980078477Rat
7606230LOC102546862uncharacterized LOC102546862118429321584295731Rat
7554618Btnl12butyrophilin-like 12116286323962879705Rat
7735872LOC102557186uncharacterized LOC102557186117340667873420224Rat
7750754LOC102549085uncharacterized LOC102549085117006936870115798Rat
7677093LOC102547162uncharacterized LOC102547162116824913268272391Rat
7724376Rnf138-ps4ring finger protein 138, pseudogene 4116372371663724313Rat
7682905LOC102549772uncharacterized LOC102549772116886436168867008Rat
7732114Eef1akmt4EEF1A lysine methyltransferase 4118029211380299670Rat
7737779LOC102551795uncharacterized LOC102551795118035226380355743Rat
7738503LOC102552590uncharacterized LOC102552590117837728378402994Rat
7741708LOC102551647uncharacterized LOC102551647118032248680342460Rat
7716638LOC102555762uncharacterized LOC102555762118305318683055591Rat
7716883LOC102551825uncharacterized LOC102551825115572602055738868Rat
7670747LOC102549131non-histone chromosomal protein HMG-17-like116605924866059682Rat
7673968LOC102550976uncharacterized LOC102550976118578063685818763Rat
7682768LOC102552306uncharacterized LOC102552306115605529456057920Rat
9097663LOC103690765extensin-like117060818570608934Rat
9118000LOC103690762translation machinery-associated protein 16 pseudogene118506850385074431Rat
9272262Ube2d2-ps1ubiquitin-conjugating enzyme E2D 2, pseudogene 1116281973262820722Rat
9282111LOC103693572uncharacterized LOC103693572115597763856002987Rat
9251123LOC103690608uncharacterized LOC103690608117664822476657835Rat
9378503Zbed2-ps1zinc finger, BED-type containing 2, pseudogene 1115473381454734698Rat
9295719LOC103690759translation machinery-associated protein 16 pseudogene118346420783467231Rat
9338791LOC10369065860S ribosomal protein L15 pseudogene118043419480434834Rat
9342064Gng10-ps1G protein subunit gamma 10, pseudogene 1116375292663753977Rat
9463950LOC103693581uncharacterized LOC103693581116222587162228955Rat
9432497LOC103690757macrophage-capping protein pseudogene117464701374710453Rat
9415494LOC103693588uncharacterized LOC103693588116797443067979898Rat
9999454Rps27a-ps23ribosomal protein S27a, pseudogene 23118445218784452723Rat
10395319LpposLIM domain containing preferred translocation partner in lipoma, opposite strand117642541576426512Rat
11373170LOC108352383uncharacterized LOC108352383117618324776193533Rat
11449348LOC108352384uncharacterized LOC108352384117934144479345742Rat
11433872LOC10835239960S ribosomal protein L26-like 1 pseudogene117196655971967694Rat
11462401LOC108352343uncharacterized LOC108352343116501296365016807Rat
11466166LOC10835236760S ribosomal protein L37 pseudogene118377643083776984Rat
11471078LOC108352357uncharacterized LOC108352357117800522178012389Rat
11457258LOC108352364uncharacterized LOC108352364118341578083421593Rat
11447782Dynll1-ps3dynein light chain LC8-type 1, pseudogene 3116694882766949432Rat
11453386LOC108352352uncharacterized LOC108352352117088685470910339Rat
11425590LOC108352349uncharacterized LOC108352349116884425868860802Rat
11407001Trnam-cau3transfer RNA methionine (anticodon CAU) 3117867870078678771Rat
11386340LOC108352341uncharacterized LOC108352341116229364262297718Rat
11390041Trnas-uga1transfer RNA serine (anticodon UGA) 1118357651283576593Rat
11402614LOC108352385uncharacterized LOC108352385117942761479433062Rat
11512794LOC108352339uncharacterized LOC108352339116145208261459645Rat
11486206LOC108352336uncharacterized LOC108352336115964128259651262Rat
11486221LOC108352401uncharacterized LOC108352401118072351080725908Rat
41086347LOC120095660uncharacterized LOC120095660116534790865351093Rat
41167741LOC120095776small nucleolar RNA SNORA79116855477768554919Rat
41203638LOC120095698uncharacterized LOC120095698118008421180089447Rat
41248894LOC120095725U7 small nuclear RNA117641296876413034Rat
41281933LOC120095727small nucleolar RNA SNORA63117776800277768126Rat
41139493LOC120095749small nucleolar RNA SNORA17116872013668720265Rat
41168066LOC120095812U6 spliceosomal RNA118336131483361420Rat
41169533LOC120095684uncharacterized LOC120095684117074016670743401Rat
41169778LOC120095709U6 spliceosomal RNA116444055264440656Rat
41170694LOC120095768small nucleolar RNA SNORA17115686809356868177Rat
41359196LOC120095569thymosin beta-10-like115580651255807153Rat
41359473LOC120095739small nucleolar RNA SNORA51118380029883800429Rat
41091386LOC120095715U6 spliceosomal RNA116451939364519497Rat
41172124LOC120095657uncharacterized LOC120095657115624458756245865Rat
41252357LOC120095750small nucleolar RNA SNORA17118415394284154074Rat
41280574LOC120095665uncharacterized LOC120095665116608793466094761Rat
41287362LOC120095689uncharacterized LOC120095689117683813476853989Rat
41386553LOC120095813U6 spliceosomal RNA118146047781460584Rat
41091877LOC120095680uncharacterized LOC120095680116998141070023987Rat
41116675LOC120095734small nucleolar RNA SNORA13118062492380625057Rat
41118012LOC120095687uncharacterized LOC120095687117661705876630585Rat
41145464Snord2small nucleolar RNA, C/D box 2117776947577769543Rat
41209682LOC120095700uncharacterized LOC120095700118102557781058687Rat
41259569Snora81small nucleolar RNA, H/ACA box 81117776757977767756Rat
41211213LOC120095717U6 spliceosomal RNA116438166664381768Rat
41260492Trnat-agu24transfer RNA threonine (anticodon AGU) 24118091804980918121Rat
41329290Rps15-ps13ribosomal protein S15, pseudogene 13118328098683288284Rat
41329650LOC120095670uncharacterized LOC120095670116858149168588456Rat
41096241LOC120095795U2 spliceosomal RNA116813511468135233Rat
41178581LOC120095678uncharacterized LOC120095678116975363169759747Rat
41213514LOC120095699uncharacterized LOC120095699118041571780454559Rat
41264294LOC120095674uncharacterized LOC120095674116927084769290769Rat
41343076LOC120095658uncharacterized LOC120095658115656294256573857Rat
41393344LOC120095793U2 spliceosomal RNA115648531256485489Rat
41123245Rpl10-ps11ribosomal protein L10, pseudogene 11117446751274475789Rat
41191110LOC120095731small Cajal body-specific RNA 8116495846164958591Rat
41192302LOC120095726small nucleolar RNA SNORA63117776665477766782Rat
41180783LOC120095807U6 spliceosomal RNA116820041468200520Rat
41216067Snora4small nucleolar RNA, H/ACA box 4117776632577766464Rat
41267227LOC120095702uncharacterized LOC120095702118236127882369783Rat
41182919LOC120095810U6 spliceosomal RNA116143012061430225Rat
41183084LOC120095792U2 spliceosomal RNA117248655372486710Rat
41269461Ncbp2as2NCBP2 antisense 2 (head to head)116882995068830715Rat
41290751LOC120095661uncharacterized LOC120095661116532415365330416Rat
41291360H3f3a-ps2H3.3 histone A, pseudogene 2117780108777801454Rat
41371114Ppid-ps8peptidylprolyl isomerase D, pseudogene 8116046435560479003Rat
41372264LOC120095666uncharacterized LOC120095666116751817267522772Rat
41291498Snora77bsmall nucleolar RNA, H/ACA box 77B118274996782750091Rat
41349001LOC120095669uncharacterized LOC120095669116832028568327078Rat
41129596LOC120095716U6 spliceosomal RNA116435892564359027Rat
41230093LOC120095743small nucleolar RNA SNORA48115452518154525320Rat
41293959LOC120095737small nucleolar RNA SNORA32115884652858846649Rat
41107307LOC120095683uncharacterized LOC120095683117035450370358842Rat
41197952LOC120095747small nucleolar RNA SNORA17117749744877497579Rat
41164990LOC120095546uncharacterized LOC120095546115746866457489060Rat
41275152LOC120095761small nucleolar RNA SNORA17118148185781481980Rat
41352287LOC120095708U6 spliceosomal RNA116184372361843823Rat
41352856LOC120095751U1 spliceosomal RNA118016192980162092Rat
41133424LOC120095547uncharacterized LOC120095547115758193857588372Rat
40945639LOC120095799U4 spliceosomal RNA118467161984671766Rat
40947157Rpl13a-ps5ribosomal protein L13A, pseudogene 5117708077777081566Rat
40973116LOC120095548uncharacterized LOC120095548115723499457248198Rat
40973363Snord66small nucleolar RNA, C/D box 66118023015280230226Rat
41339693LOC120095553uncharacterized LOC120095553116635073066366306Rat
41341100Or2l13l-ps2olfactory receptor family 2 subfamily L member 13 like, pseudogene 2118130916281310272Rat
40926308LOC120095732small nucleolar RNA SNORA36 family116736888067369010Rat
40953398LOC120095703uncharacterized LOC120095703118249327482494166Rat
40955254Ccnb1ip1-ps4cyclin B1 interacting protein 1, pseudogene 4117780357577804448Rat
40999098LOC120095692uncharacterized LOC120095692117869188878709582Rat
40959898Trnaa-agc35transfer RNA alanine (anticodon AGC) 35116480028964800361Rat
40960446LOC120095677uncharacterized LOC120095677116977949969782866Rat
41005044Rpl34-ps2ribosomal protein L34, pseudogene 2118330506183314950Rat
40961418LOC120095662uncharacterized LOC120095662116526803365272172Rat
41007679LOC120095744small nucleolar RNA SNORA17116258475362584884Rat
40965365LOC120095664uncharacterized LOC120095664116586556365871875Rat
40991205LOC120095682uncharacterized LOC120095682117032832870335873Rat
40940605LOC120095667uncharacterized LOC120095667116810548168114450Rat
40965619LOC120095552uncharacterized LOC120095552116642486366426504Rat
40991866LOC120095798U2 spliceosomal RNA116337850263378629Rat
40943335LOC120095770small nucleolar RNA SNORA17118203589182035985Rat
40944194LOC120095788U2 spliceosomal RNA115792982857929976Rat
40995627LOC120095681uncharacterized LOC120095681117023491270238937Rat
41024616LOC120095686uncharacterized LOC120095686117406563674081511Rat
41025228LOC120095536protein FAM246A-like118315095283151644Rat
41048265LOC120095668uncharacterized LOC120095668116825634668261022Rat
41048357LOC120095690uncharacterized LOC120095690117765910477672704Rat
41048783Scarna14l2small Cajal body-specific RNA 14 like 2118261297182613105Rat
41315717LOC120095697uncharacterized LOC120095697118003073880054940Rat
41247309Kxd1-ps1KxDL motif containing 1, pseudogene 1116594368665944219Rat
41257003LOC120095695uncharacterized LOC120095695117967834779683252Rat
41055433LOC120095719U6 spliceosomal RNA116446487564464975Rat
41258503LOC120095797U2 spliceosomal RNA118540793285408059Rat
41297945Prkaa1-ps1protein kinase AMP-activated catalytic subunit alpha 1, pseudogene 1117788807377897420Rat
41314974LOC120095778small nucleolar RNA U13115504225055042354Rat
41336808LOC120095679uncharacterized LOC120095679116993900569958053Rat
41035465LOC120095763small nucleolar RNA SNORA17117591194175912071Rat
41061597LOC120095691uncharacterized LOC120095691117849171778496661Rat
41301821LOC120095571uncharacterized LOC120095571117034029270344905Rat
41228426LOC120095712U6 spliceosomal RNA116463155164631651Rat
41235646LOC120095672uncharacterized LOC120095672116889257068895856Rat
41304704LOC120095659stefin-2-like116453155664533991Rat
41042846Ewsr1-ps5EWS RNA-binding protein 5118099316280996036Rat
41241227LOC120095693small ubiquitin-related modifier 2-like117916345779164088Rat
41162418LOC120095818U6 spliceosomal RNA117997194179972044Rat
7585592LOC102547530uncharacterized LOC102547530117082178270842973Rat
9082951Ahcy-ps11adenosylhomocysteinase, pseudogene 11117748342577484973Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10375D11Mgh1148118256655382566702Ratregion
10376D11Wox6173118256654582566718Ratregion
10911D11Wox3186115543703355437217Ratregion
11044D11Wox5246118344055583440803Ratregion
34112D11Mgh4194115980262259802794Ratregion
34725D11Mgh3168116642214866422316Ratregion
34727D11Mgh9169116297952662979675Ratregion
11291D11Mgh7161117757016877570330Ratregion
11292D11Got72144117757022577570369Ratregion
11343D11Wox2156117695623676956380Ratregion
11344D11Arb1223117695623576956458Ratregion
36281D11Rat4162116279034262790509Ratregion
36342D11Mit9256115938586459386120Ratregion
37512D11Rat50236118284646682846715Ratregion
37096D11Rat92149117410677274106899Ratregion
37942D11Rat46178117885132978851519Ratregion
34823D11Rat32155118610513886105297Ratregion
34912D11Rat30167117449920974499378Ratregion
34995D11Rat5138115493098254931120Ratregion
35094D11Rat2145116752590367526048Ratregion
35154D11Rat102246116073711360737373Ratregion
35859D11Rat1166118245082582450994Ratregion
35953D11Rat37164117211751372117673Ratregion
35955D11Rat38171116032465660324829Ratregion
38284D11Rat47211117063319470633407Ratregion
38382D11Rat45224118118429181184507Ratregion
40380D11Rat62173116771505867715230Ratregion
40550D11Rat60171117161796871618130Ratregion
40678D11Rat59213117130873871308949Ratregion
38558D11Rat64237116282421462824451Ratregion
38672D11Rat51239117026245170262681Ratregion
40010D11Rat63249116583979965840002Ratregion
40048D11Rat58164117687881276878990Ratregion
40082D11Rat82173117847461278474785Ratregion
40158D11Rat65167115513672955136892Ratregion
38800D11Rat43234118305175483051965Ratregion
38964D11Rat42102117688121076881304Ratregion
39084D11Rat93240116611332166113562Ratregion
39356D11Rat41218118299323282993457Ratregion
41952D11Arb2199117747324577473444Ratregion
41954D11Arb4236116642214166422377Ratregion
41240D11Rat83147116213833062138486Ratregion
41256D11Rat61165116944607069446234Ratregion
41482D11Rat57170117420421074204382Ratregion
42952D11Rat107138116549730365497453Ratregion
42953D11Rat94203116582640665826598Ratregion
42954D11Rat115173116861141968611592Ratregion
42955D11Rat106132116834015468340286Ratregion
42956D11Rat105205117113489671135104Ratregion
42957D11Rat104237117429126074291612Ratregion
42958D11Rat103225117937185779372066Ratregion
42959D11Rat90207117973014479730349Ratregion
42376D11Rat117115117648357876483653Ratregion
40870D11Rat55231117946973379469960Ratregion
40938D11Rat56195117571807775718276Ratregion
41612D11Rat54138118219674082196868Ratregion
41692D11Rat89219118216900182169223Ratregion
41756D11Rat91234118097033780970606Ratregion
41874D11Rat95222116522311265223335Ratregion
60568D7Got152172116786709467867266Ratregion
44846D11Got77244118559367085593914Ratregion
44847D11Got73300117885134078851641Ratregion
44849D11Got78198117873113978731336Ratregion
44851D11Wox7266117406199274062268Ratregion
44852D11Got70247117684170876841952Ratregion
44855D11Got66169117444867174448840Ratregion
44857D11Got62162117211205372112215Ratregion
44858D11Got63206117171787371718079Ratregion
44862D11Got53112116641439566414504Ratregion
44863D11Got56133116610229366102426Ratregion
44864D11Got54166116710827267108435Ratregion
44866D11Got55178116512395365124130Ratregion
44867D11Got43145116495528664955431Ratregion
44868D11Got57296116516324965163545Ratregion
44869D11Got44175116495097164951146Ratregion
44870D11Got47221115761545257615671Ratregion
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5065136AI044813203116681104666811249Ratregion
5065290BE121390164116471666164716825Ratregion
5060424BE110023183118308670783086890Ratregion
5060432BE110052211116655077566550986Ratregion
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5060674BE098844183118455077484550957Ratregion
5062408BF397893171116250047362500644Ratregion
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5065686BI303735191118352731783527508Ratregion
5065686BI303735191118352731783527508Ratregion
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5062196BE106303201118215382182154022Ratregion
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5064038BE120509185116035711860357303Ratregion
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5062524BF403357192118274050582740697Ratregion
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5064586BE108145150118352770583527855Ratregion
5064592BE1081640118532122885322091Ratregion
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5066232PMC123023P2187117695780176957988Ratregion
5061344BF396268249116568870665688955Ratregion
5063136BI295978183117758173577581918Ratregion
5064672BF399547104117841043478410538Ratregion
5066294PMC139890P1132117776665177766783Ratregion
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5061480BE105289206118367827583678481Ratregion
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5061604BI287777158118387468683874844Ratregion
5061654BF396995212116658421666584428Ratregion
5084108AI407788226118383800083838225Ratregion
5086905BM387580167116264461362644780Ratregion
5082311BE119158159118268701582687174Ratregion
5086289AI535225202117443514174435343Ratregion
5086355AA850138185118191157681911761Ratregion
5086355AA850138185118194598481946169Ratregion
5087134AI229346180116566877465668954Ratregion
5087422Ephb3695117984072579841420Ratregion
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5087684Adcy5150116547166565471815Ratregion
5087828Drd3107115687981556879922Ratregion
5087838Eif4a2188117776652777766952Ratregion
5087922Hira157118213247082132627Ratregion
5089759AU049346167116202703862027203Ratregion
5087408UniSTS:2657090115846942858469776Ratregion
5087410Stk22a240118309109483091334Ratregion
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5083055BF390716153118276904282769195Ratregion
5083281BG374132117115484794454848061Ratregion
5088064Prodh135118292663682926859Ratregion
5088151UniSTS:144823780116728305967283839Ratregion
5088195AU048424191116514997865150169Ratregion
5089255AU049047209116895973468959945Ratregion
5089265AU049053275115691830956918584Ratregion
5089365AU049112256117178172871781984Ratregion
5083333BG374874176116323950763239683Ratregion
5090687AU049901183115601822556018408Ratregion
5090861AU050010167116710826767108434Ratregion
5083645BI276601165116478120264781367Ratregion
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5090435AU049748216117723367177233887Ratregion
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5087578PMC337033P3155115846953958469694Ratregion
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5081967BE118936168116880839568808563Ratregion
5081989BE118996191118021429180214482Ratregion
5085513AI045433118116787869467878812Ratregion
5080950RH141877206115661269156612897Ratregion
5080950RH141877206115661269156612897Ratregion
5090405AU049731264115777687457777139Ratregion
5090617AU049859269115691922456919495Ratregion
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5090253AU049641295117493039674930693Ratregion
5088973AU048879277116819096068191237Ratregion
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5089203AU049016241116673992466740015Ratregion
5082667BE119962154116876766868767822Ratregion
5085930AI178489154118392080683920960Ratregion
5080872RH141831205115507668355076888Ratregion
5080978RH141893197116607189266072089Ratregion
5084522AI169712180116930280969302989Ratregion
5084612AI178367120115477639954776519Ratregion
5082989BF390582151116623882966238980Ratregion
5086090BM385341172116216823962168411Ratregion
5086213AI101806166115645925256459418Ratregion
5086232BQ204693197116273045862730655Ratregion
5086371AA800028212116471897164719183Ratregion
5081326RH142095206118348629283486498Ratregion
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5085629BM383343199117097463470974833Ratregion
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5086006BM385238194115528481255285005Ratregion
5083799AI599574178118236141482361592Ratregion
5084044AI40823894117820537078205464Ratregion
5502589RH12546195117815197378152068Ratregion
5502666Krt8506116307439763074903Ratregion
5507557D18S1297114118216748082168493Ratregion
5503240UniSTS:237454224118273693782737161Ratregion
5503244UniSTS:237455213118275049682750709Ratregion
5503250UniSTS:237501257116546162365461880Ratregion
5503922UniSTS:256469848118307279883073646Ratregion
5503744ZBTB20_9462952115707542957076381Ratregion
5507652AA4759090116683054666831914Ratregion
5507697D22S1687184118352672983526913Ratregion
5507707SST-112F84117695713176957836Ratregion
5503615UniSTS:465379640118221346682214106Ratregion
5503933UniSTS:256695853117695697476957827Ratregion
5504488PMC22838P1107118227846382278570Ratregion
5504488PMC22838P1107118227846382278570Ratregion
5504201UniSTS:260493479118309099983091478Ratregion
5504203Es2el0118305651983057529Ratregion
5504207UniSTS:260495143118308683383086976Ratregion
5504979Snai21042118618395386184995Ratregion
5505298Ppp2ca468118227860482279072Ratregion
5505300Ppp2ca51118227903982279090Ratregion
5505354Atp6v1a147115659809456598324Ratregion
5505826UniSTS:4957971592118307212083073712Ratregion
5505998UniSTS:4967990118307698183077232Ratregion
5506362UniSTS:478969750118307919583079945Ratregion
5506469G35720169117856980678569975Ratregion
5507125UniSTS:224674192116695801566958207Ratregion
5499503stSG6025710116556320365563526Ratregion
5499503stSG6025710116556322365563526Ratregion
5499611MARC_2765-2766:991933387:181118372204083722358Ratregion
5500272D22S1095E102118202458182024683Ratregion
5500298D20S100580117776452777764607Ratregion
5500236AI481689112116566780265667914Ratregion
5502553RH125315189116867868368678872Ratregion
5502949Zbtb20812115708453357085345Ratregion
5503246UniSTS:237474226117776898477769210Ratregion
5500607RH136232214118396074883960962Ratregion
5500549RH135933204118317597983176183Ratregion
5503248UniSTS:237479202117048400870484210Ratregion
5501287DRD3-556F200115687985656881140Ratregion
5501612RH758261274116526697265268246Ratregion
5504183UniSTS:259614377117070651770707894Ratregion
5504199UniSTS:260486102118308655783086659Ratregion
5504508PMC25851P285117486563574865720Ratregion
5501675Dgcr60118292792582929587Ratregion
5501681Hes1401117070583470706235Ratregion
5501926MARC_17489-17490:1016467909:1211116542214265423422Ratregion
5505390Ewsr10118099472480995517Ratregion
5505534STS-Z40707455115729534557295800Ratregion
5502981Ccnb1ip1500117780377777804277Ratregion
5502465RH1249400118292040082921801Ratregion
5502493RH125069110118372576683725876Ratregion
Position Markers

Peak: (Sst)
Rat AssemblyChrPosition (strand)Source
GRCr81190,461,546 - 90,462,823 (+)NCBI
mRatBN7.21176,956,896 - 76,958,173 (+)NCBI
mRatBN7.2 Ensembl1176,956,896 - 76,958,173 (+)Ensembl
UTH_Rnor_SHR_Utx1185,714,888 - 85,716,167 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01178,350,097 - 78,351,376 (+)NCBI
UTH_Rnor_WKY_Bbb_1.01177,429,193 - 77,430,472 (+)NCBI
Rnor_6.01180,358,172 - 80,359,449 (+)NCBI
Rnor_6.0 Ensembl1180,358,211 - 80,359,444 (+)Ensembl
Rnor_5.01180,374,262 - 80,375,447 (-)NCBI
RGSC_v3.41179,125,031 - 79,126,216 (+)NCBI
RGSC_v3.11179,182,619 - 79,183,805 (+)NCBI
Celera1175,836,256 - 75,837,533 (+)NCBI
RH 3.4 Map11640.6RGD
Cytogenetic Map11q23NCBI


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)112328045668280456Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)112328045668280456Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112767241082846715Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)112952841860324829Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)112952841882566702Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)113123913478851519Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)114094618882566702Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)114428575982566702Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)114545932375190161Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)115445753486241447Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)115513672982993457Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)115635142486241447Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)115980279482566545Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116611332182169223Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)116642214886241447Rat
1354593Stl12Serum triglyceride level QTL 123.36blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)116642214886241447Rat
1354656Bvd3Brain ventricular dilatation QTL 33.640.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116944607082846715Rat
10450831Scl80Serum cholesterol level QTL 804.70.01blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)117695713183051965Rat
2302043Pia27Pristane induced arthritis QTL 2718.60.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)118256654583440803Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Plsm4

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general affects the expression of front feet phalanges of PLS (caused by the Lx mutation) in BN background 632346