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Gene: Atp13a4 (ATPase 13A4) Rattus norvegicus
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Symbol: Atp13a4
Name: ATPase 13A4
Description: Predicted to have ATP binding activity; ATPase activity; and metal ion binding activity. Predicted to be involved in cellular calcium ion homeostasis. Predicted to localize to the endoplasmic reticulum membrane. Orthologous to human ATP13A4 (ATPase 13A4); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ATPase type 13A4; LOC288026; probable cation-transporting ATPase 13A4; RGD1306927; similar to 9330174J19Rik protein
Orthologs:
Homo sapiens (human) : ATP13A4 (ATPase 13A4)  HGNC  Alliance
Mus musculus (house mouse) : Atp13a4 (ATPase type 13A4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp13a4 (ATPase 13A4)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP13A4 (ATPase 13A4)
Canis lupus familiaris (dog) : ATP13A4 (ATPase 13A4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp13a4 (ATPase 13A4)
Sus scrofa (pig) : ATP13A4 (ATPase 13A4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01174,833,824 - 74,968,160 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1174,834,050 - 74,968,336 (+)Ensembl
Rnor_5.01177,879,676 - 78,013,596 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41173,163,802 - 73,251,192 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11173,214,680 - 73,308,776 (+)NCBI
Celera1170,191,585 - 70,323,485 (+)NCBICelera
Cytogenetic Map11q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp13a4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306927
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.