Cep19 (centrosomal protein 19) - Rat Genome Database

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Gene: Cep19 (centrosomal protein 19) Rattus norvegicus
Analyze
Symbol: Cep19
Name: centrosomal protein 19
RGD ID: 621352
Description: Predicted to be involved in microtubule anchoring at centrosome and vesicle targeting, trans-Golgi to periciliary membrane compartment. Predicted to be located in cilium; cytosol; and nucleoplasm. Predicted to be active in microtubule cytoskeleton. Orthologous to human CEP19 (centrosomal protein 19); INTERACTS WITH 6-propyl-2-thiouracil; amitrole; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AF146738; centrosomal protein of 19 kDa; hypothetical protein LOC192229; RGD621352; similar to RIKEN cDNA 1500031L02; testis specific protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81182,182,868 - 82,192,134 (-)NCBIGRCr8
mRatBN7.21168,677,869 - 68,687,117 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1168,677,871 - 68,687,022 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1177,514,918 - 77,524,098 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01170,177,010 - 70,186,133 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01169,204,015 - 69,213,195 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01171,921,713 - 71,938,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1171,921,716 - 71,938,165 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,004,786 - 75,013,404 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41170,500,062 - 70,508,772 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11170,557,650 - 70,566,361 (-)NCBI
Celera1168,100,332 - 68,109,479 (-)NCBICelera
Cytogenetic Map11q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cep19Ratautistic disorder  ISOCEP19 (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
Cep19RatBardet-Biedl syndrome  ISOCEP19 (Homo sapiens)8554872ClinVar Annotator: match by term: Bardet-Biedl syndromeClinVarPMID:29127258
Cep19Ratchromosome 3q29 microdeletion syndrome  ISOCEP19 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 3q29 microdeletion syndromeClinVar 
Cep19RatMorbid Obesity and Spermatogenic Failure  ISOCEP19 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:24268657 more ...
Cep19Ratoptic atrophy  ISOCEP19 (Homo sapiens)8554872ClinVar Annotator: match by term: Optic atrophyClinVarPMID:25741868 and PMID:28492532
Cep19Ratschizophrenia  ISOCEP19 (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106 and PMID:30208311
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cep19RatMorbid Obesity and Spermatogenic Failure  ISOCEP19 (Homo sapiens)7240710 OMIM 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cep19Rat1,2-dimethylhydrazine multiple interactionsISOCep19 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of CEP19 mRNACTDPMID:22206623
Cep19Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOCEP19 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of CEP19 mRNACTDPMID:20106945 and PMID:21632981
Cep19Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOCEP19 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of CEP19 mRNA and [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CEP19 mRNACTDPMID:28628672
Cep19Rat4,4'-sulfonyldiphenol multiple interactionsISOCEP19 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CEP19 mRNACTDPMID:28628672
Cep19Rat4,4'-sulfonyldiphenol decreases expressionISOCep19 (Mus musculus)6480464bisphenol S results in decreased expression of CEP19 mRNACTDPMID:39298647
Cep19Rat4-hydroxyphenyl retinamide increases expressionISOCep19 (Mus musculus)6480464Fenretinide results in increased expression of CEP19 mRNACTDPMID:28973697
Cep19Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of CEP19 mRNACTDPMID:30047161
Cep19Rataflatoxin B1 increases expressionISOCEP19 (Homo sapiens)6480464Aflatoxin B1 results in increased expression of CEP19 mRNACTDPMID:22100608
Cep19Ratamitrole decreases expressionEXP 6480464Amitrole results in decreased expression of CEP19 mRNACTDPMID:30047161
Cep19Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of CEP19 mRNACTDPMID:16483693
Cep19Rataristolochic acid A increases expressionISOCEP19 (Homo sapiens)6480464aristolochic acid I results in increased expression of CEP19 mRNACTDPMID:33212167
Cep19Ratarsane multiple interactionsISOCEP19 (Homo sapiens)6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in decreased expression of CEP19 mRNACTDPMID:39836092
Cep19Ratarsenic atom multiple interactionsISOCEP19 (Homo sapiens)6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in decreased expression of CEP19 mRNACTDPMID:39836092
Cep19Ratbenzo[a]pyrene decreases expressionISOCEP19 (Homo sapiens)6480464Benzo(a)pyrene results in decreased expression of CEP19 mRNACTDPMID:22316170
Cep19Ratbenzo[a]pyrene increases expressionISOCEP19 (Homo sapiens)6480464Benzo(a)pyrene results in increased expression of CEP19 mRNACTDPMID:32234424
Cep19Ratbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of CEP19 mRNACTDPMID:25181051 more ...
Cep19Ratbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of CEP19 mRNACTDPMID:31129395 and PMID:34947998
Cep19Ratbisphenol A multiple interactionsISOCEP19 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of CEP19 mRNACTDPMID:28628672
Cep19Ratbisphenol F increases expressionISOCep19 (Mus musculus)6480464bisphenol F results in increased expression of CEP19 mRNACTDPMID:38685157
Cep19Ratbutan-1-ol multiple interactionsISOCEP19 (Homo sapiens)6480464[[Gasoline co-treated with 1-Butanol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic Hydrocarbons]] which results in increased expression of CEP19 mRNACTDPMID:29432896

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Biological Process
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cep19Ratcell projection organization involved_inIEAUniProtKB-KW:KW-09701600115GO_REF:0000043UniProtGO_REF:0000043
Cep19Ratcilium assembly involved_inISSUniProtKB:Q96LK01600115GO_REF:0000024UniProtGO_REF:0000024
Cep19Ratcilium assembly involved_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratcilium assembly involved_inISOCEP19 (Homo sapiens)1624291 PMID:28428259 more ...RGDPMID:28428259 more ...
Cep19Ratmicrotubule anchoring at centrosome involved_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratmicrotubule anchoring at centrosome involved_inIBAPANTHER:PTN001267924 and UniProtKB:Q96LK01600115GO_REF:0000033GO_CentralGO_REF:0000033
Cep19Ratmicrotubule anchoring at centrosome involved_inISOCEP19 (Homo sapiens)1624291 PMID:28659385RGDPMID:28659385
Cep19Ratmicrotubule anchoring at centrosome involved_inISSUniProtKB:Q96LK01600115GO_REF:0000024UniProtGO_REF:0000024
Cep19Ratvesicle targeting, trans-Golgi to periciliary membrane compartment involved_inISOCEP19 (Homo sapiens)1624291 PMID:28659385RGDPMID:28659385
Cep19Ratvesicle targeting, trans-Golgi to periciliary membrane compartment involved_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratvesicle targeting, trans-Golgi to periciliary membrane compartment involved_inISSUniProtKB:Q96LK01600115GO_REF:0000024UniProtGO_REF:0000024
Cep19Ratvesicle targeting, trans-Golgi to periciliary membrane compartment involved_inIBAPANTHER:PTN001267924 and UniProtKB:Q96LK01600115GO_REF:0000033GO_CentralGO_REF:0000033
1 to 12 of 12 rows

Cellular Component
1 to 20 of 27 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cep19Ratcell projection located_inIEAUniProtKB-KW:KW-09661600115GO_REF:0000043UniProtGO_REF:0000043
Cep19Ratcentriole located_inISSUniProtKB:Q96LK01600115GO_REF:0000024UniProtGO_REF:0000024
Cep19Ratcentriole is_active_inIBAPANTHER:PTN001267924 and UniProtKB:Q96LK01600115GO_REF:0000033GO_CentralGO_REF:0000033
Cep19Ratcentriole located_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratcentriole located_inIEAUniProtKB-SubCell:SL-00461600115GO_REF:0000044UniProtGO_REF:0000044
Cep19Ratcentriole located_inISOCEP19 (Homo sapiens)1624291 PMID:21399614 more ...RGDPMID:21399614 more ...
Cep19Ratcentrosome located_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratcentrosome is_active_inIBAPANTHER:PTN001267926 and UniProtKB:Q96LK01600115GO_REF:0000033GO_CentralGO_REF:0000033
Cep19Ratcentrosome located_inISOCEP19 (Homo sapiens)1624291 RGDGO_REF:0000052
Cep19Ratciliary basal body located_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratciliary basal body is_active_inIBAPANTHER:PTN001267924 and UniProtKB:Q96LK01600115GO_REF:0000033GO_CentralGO_REF:0000033
Cep19Ratciliary basal body located_inISOCEP19 (Homo sapiens)1624291 PMID:24268657 more ...RGDGO_REF:0000052 more ...
Cep19Ratciliary basal body located_inISSUniProtKB:Q96LK01600115GO_REF:0000024UniProtGO_REF:0000024
Cep19Ratcilium located_inISOCEP19 (Homo sapiens)1624291 PMID:28625565RGDPMID:28625565
Cep19Ratcilium located_inIEAUniProtKB-KW:KW-09691600115GO_REF:0000043UniProtGO_REF:0000043
Cep19Ratcilium located_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Cep19Ratcytoskeleton located_inIEAUniProtKB-KW:KW-02061600115GO_REF:0000043UniProtGO_REF:0000043
Cep19Ratcytosol located_inIEAUniProtKB:Q96LK0 and ensembl:ENSP000003872091600115GO_REF:0000107EnsemblGO_REF:0000107
Cep19Ratcytosol located_inISOCEP19 (Homo sapiens)1624291 RGDGO_REF:0000052
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Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cep19Ratprotein binding enablesISOCEP19 (Homo sapiens)1624291UniProtKB:A8MTQ0 more ...RGDPMID:16189514 more ...


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:21399614   PMID:24268657   PMID:28428259   PMID:28625565   PMID:28659385  



Cep19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81182,182,868 - 82,192,134 (-)NCBIGRCr8
mRatBN7.21168,677,869 - 68,687,117 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1168,677,871 - 68,687,022 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1177,514,918 - 77,524,098 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01170,177,010 - 70,186,133 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01169,204,015 - 69,213,195 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01171,921,713 - 71,938,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1171,921,716 - 71,938,165 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,004,786 - 75,013,404 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41170,500,062 - 70,508,772 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11170,557,650 - 70,566,361 (-)NCBI
Celera1168,100,332 - 68,109,479 (-)NCBICelera
Cytogenetic Map11q22NCBI
CEP19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383196,706,277 - 196,712,250 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3196,706,277 - 196,712,250 (-)EnsemblGRCh38hg38GRCh38
GRCh373196,433,148 - 196,439,121 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363197,918,298 - 197,923,491 (-)NCBINCBI36Build 36hg18NCBI36
Cytogenetic Map3q29NCBI
HuRef3193,729,843 - 193,735,809 (-)NCBIHuRef
CHM1_13196,404,344 - 196,410,314 (-)NCBICHM1_1
T2T-CHM13v2.03199,425,670 - 199,431,642 (-)NCBIT2T-CHM13v2.0
Cep19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391631,918,618 - 31,926,875 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1631,918,618 - 31,926,887 (+)EnsemblGRCm39 Ensembl
GRCm381632,099,789 - 32,108,068 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1632,099,800 - 32,108,069 (+)EnsemblGRCm38mm10GRCm38
MGSCv371632,099,888 - 32,108,140 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361632,019,549 - 32,027,801 (+)NCBIMGSCv36mm8
Celera1632,595,894 - 32,605,144 (+)NCBICelera
Cytogenetic Map16B2NCBI
cM Map1622.4NCBI
Cep19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542012,823,889 - 12,825,337 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542012,823,663 - 12,829,598 (-)NCBIChiLan1.0ChiLan1.0
CEP19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22194,576,245 - 194,582,255 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13194,580,964 - 194,586,972 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03194,050,519 - 194,056,524 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13203,990,477 - 203,996,486 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3203,988,092 - 203,996,486 (-)Ensemblpanpan1.1panPan2
CEP19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13329,733,860 - 29,740,836 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3329,735,351 - 29,741,128 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3329,757,517 - 29,764,533 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03329,977,353 - 29,984,376 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.13329,754,593 - 29,761,609 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03329,809,508 - 29,816,537 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03330,432,110 - 30,439,130 (-)NCBIUU_Cfam_GSD_1.0
Cep19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602124,595,931 - 124,601,054 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367841,283,886 - 1,289,965 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367841,284,215 - 1,289,362 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13133,420,032 - 133,428,390 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113133,420,017 - 133,428,394 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213143,068,624 - 143,074,817 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEP19
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11590,514,147 - 90,519,580 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1590,514,438 - 90,521,380 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604164,298,556 - 64,305,151 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep19
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473061,783,903 - 61,790,001 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473061,783,665 - 61,789,980 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Cep19
53 total Variants

Predicted Target Of
Summary Value
Count of predictions:73
Count of miRNA genes:58
Interacting mature miRNAs:65
Transcripts:ENSRNOT00000037795
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)114545932375190161Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)116642214886241447Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)111945620576331918Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116611332182169223Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat

1 to 10 of 21 rows
AI112486  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21168,677,884 - 68,678,098 (+)MAPPERmRatBN7.2
Rnor_6.01171,921,730 - 71,921,944NCBIRnor6.0
Celera1168,100,348 - 68,100,561UniSTS
RH 3.4 Map11406.71UniSTS
Cytogenetic Map11q22UniSTS
RH125315  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21168,678,683 - 68,678,872 (+)MAPPERmRatBN7.2
Rnor_6.01171,922,530 - 71,922,718NCBIRnor6.0
Rnor_5.01175,005,510 - 75,005,698UniSTSRnor5.0
RGSC_v3.41170,500,851 - 70,501,039UniSTSRGSC3.4
Celera1168,101,147 - 68,101,335UniSTS
Cytogenetic Map11q22UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000037795   ⟹   ENSRNOP00000038182
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1168,677,871 - 68,687,022 (-)Ensembl
Rnor_6.0 Ensembl1171,921,716 - 71,938,165 (-)Ensembl
RefSeq Acc Id: NM_138865   ⟹   NP_620220
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81182,182,868 - 82,192,032 (-)NCBI
mRatBN7.21168,677,869 - 68,687,033 (-)NCBI
Rnor_6.01171,921,714 - 71,938,295 (-)NCBI
Rnor_5.01175,004,786 - 75,013,404 (-)NCBI
RGSC_v3.41170,500,062 - 70,508,772 (-)RGD
Celera1168,100,332 - 68,109,479 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008768696   ⟹   XP_008766918
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81182,182,868 - 82,192,134 (-)NCBI
mRatBN7.21168,677,869 - 68,687,117 (-)NCBI
Rnor_6.01171,921,713 - 71,938,335 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008768697   ⟹   XP_008766919
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81182,182,868 - 82,192,134 (-)NCBI
mRatBN7.21168,677,869 - 68,687,117 (-)NCBI
Rnor_6.01171,921,713 - 71,938,335 (-)NCBI
Sequence:
1 to 9 of 9 rows
Protein RefSeqs NP_620220 (Get FASTA)   NCBI Sequence Viewer  
  XP_008766918 (Get FASTA)   NCBI Sequence Viewer  
  XP_008766919 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD53055 (Get FASTA)   NCBI Sequence Viewer  
  EDM11437 (Get FASTA)   NCBI Sequence Viewer  
  EDM11438 (Get FASTA)   NCBI Sequence Viewer  
  EDM11439 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000038182
GenBank Protein Q9QZX9 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_620220   ⟸   NM_138865
- UniProtKB: G3V974 (UniProtKB/TrEMBL),   A6IRT5 (UniProtKB/TrEMBL),   A6IRT6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008766919   ⟸   XM_008768697
- Peptide Label: isoform X1
- UniProtKB: G3V974 (UniProtKB/TrEMBL),   A6IRT5 (UniProtKB/TrEMBL),   A6IRT6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008766918   ⟸   XM_008768696
- Peptide Label: isoform X1
- UniProtKB: G3V974 (UniProtKB/TrEMBL),   A6IRT5 (UniProtKB/TrEMBL),   A6IRT6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000038182   ⟸   ENSRNOT00000037795

Name Modeler Protein Id AA Range Protein Structure
AF-Q9QZX9-F1-model_v2 AlphaFold Q9QZX9 1-163 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13698215
Promoter ID:EPDNEW_R8740
Type:initiation region
Name:Cep19_1
Description:centrosomal protein 19
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01171,938,171 - 71,938,231EPDNEW


1 to 15 of 15 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-21081 BioCyc
Ensembl Genes ENSRNOG00000024924 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000037795 ENTREZGENE
InterPro CEP19 UniProtKB/Swiss-Prot
NCBI Gene 192229 ENTREZGENE
PANTHER CENTROSOMAL PROTEIN OF 19 KDA UniProtKB/Swiss-Prot
  PTHR31539 UniProtKB/Swiss-Prot
Pfam CEP19 UniProtKB/Swiss-Prot
PhenoGen Cep19 PhenoGen
RatGTEx ENSRNOG00000024924 RatGTEx
UniProt A6IRT5 ENTREZGENE, UniProtKB/TrEMBL
  A6IRT6 ENTREZGENE, UniProtKB/TrEMBL
  CEP19_RAT UniProtKB/Swiss-Prot
  G3V974 ENTREZGENE, UniProtKB/TrEMBL
  Q9QZX9 ENTREZGENE
1 to 15 of 15 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-05-13 Cep19  centrosomal protein 19  RGD621352  similar to RIKEN cDNA 1500031L02  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 RGD621352  similar to RIKEN cDNA 1500031L02  AF146738  testis specific protein  Symbol and Name updated 1299863 APPROVED
2002-08-07 AF146738  testis specific protein      Symbol and Name status set to provisional 70820 PROVISIONAL