Neuinf10 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Neuinf10 (Neuroinflammation QTL 10) Rattus norvegicus

Symbol: Neuinf10
Name: Neuroinflammation QTL 10
RGD ID: 2298551
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: spinal cord beta-2 microglobulin mRNA level   (CMO:0002125)    
LOD Score: 3.7
P Value: Not Available
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21131,239,134 - 78,851,519RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01132,155,520 - 82,443,118RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01135,759,925 - 85,534,312RGDRnor5.0
RGSC_v3.41131,988,113 - 81,091,531RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: BN/Han LEW.1N 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/Han  (IEA)
LEW.1N  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Identification of gene regions regulating inflammatory microglial response in the rat CNS after nerve injury. Diez M, etal., J Neuroimmunol. 2009 Jun 12.
2. Unpublished observations for QTL Neuinf4-12 Personal communication with Dr. Diez

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2322928Mrps6mitochondrial ribosomal protein S6113129535831348483Rat
621530Slc5a3solute carrier family 5 member 3113131384731316293Rat
9394128LOC103693540uncharacterized LOC103693540113138151331395751Rat
41107969LOC120095786U2 spliceosomal RNA113139137131391550Rat
7555402LOC102548079uncharacterized LOC102548079113145618731464103Rat
621383Kcne2potassium voltage-gated channel subfamily E regulatory subunit 2113151717631530026Rat
2299853Smim11small integral membrane protein 11113153325731543002Rat
1560327C11h21orf140similar to human chromosome 21 open reading frame 140113154968931552257Rat
2956Kcne1potassium voltage-gated channel subfamily E regulatory subunit 1113158095131594116Rat
11442325LOC108352307uncharacterized LOC108352307113158259431584124Rat
631338Rcan1regulator of calcineurin 1113162220831702150Rat
727938Clic6chloride intracellular channel 6113173781331780360Rat
41063304LOC120095806U6 spliceosomal RNA113179754531797651Rat
2283Runx1RUNX family transcription factor 1113183988032074427Rat
7605601LOC102548550uncharacterized LOC102548550113217418932178241Rat
7601414LOC102549086uncharacterized LOC102549086113261356632623374Rat
2325478Mir802microRNA 802113262652532626620Rat
1562683RGD1562683RGD1562683113280365432816291Rat
619899Setd4SET domain containing 4113282950932859162Rat
41227328LOC120095803U4 spliceosomal RNA113284606532846217Rat
2286Cbr1carbonyl reductase 1113286057132862981Rat
1583715Trub2-ps1TruB pseudouridine synthase family member 2, pseudogene 1113287189332873147Rat
41210949Cbr1l1carbonyl reductase 1 like 1113287656332884234Rat
6502456Trub2-ps3TruB pseudouridine synthase family member 2, pseudogene 3113288797432889228Rat
7631561Cbr1l2carbonyl reductase 1 like 2113289264032895277Rat
41127113Trub2-ps6TruB pseudouridine synthase family member 2, pseudogene 6113296589532966834Rat
2321756Cbr1l3carbonyl reductase 1 like 3113298513632992000Rat
1309728Cbr3carbonyl reductase 3113300861533016877Rat
1306097Dop1bDOP1 leucine zipper like protein B113302437633125931Rat
1306466Ifitm3-ps2interferon induced transmembrane protein3, pseudogene 2113313714633137562Rat
1307924Morc3MORC family CW-type zinc finger 3113315190633194650Rat
1307634Chaf1bchromatin assembly factor 1 subunit B113320089433221076Rat
1309165Cldn14claudin 14113323228133329440Rat
41114239LOC120095564uncharacterized LOC120095564113339300433397850Rat
7542458LOC102546699uncharacterized LOC102546699113340815833414119Rat
1308016Sim2SIM bHLH transcription factor 2113341421833453663Rat
1565360Hlcsholocarboxylase synthetase113345580633635197Rat
11459335LOC108352309small nuclear ribonucleoprotein F-like113353361433533927Rat
1308788Ripply3ripply transcriptional repressor 3113364847133656587Rat
1307205Pigpphosphatidylinositol glycan anchor biosynthesis, class P113368294333689111Rat
1308654Ttc3tetratricopeptide repeat domain 3113368911933788976Rat
41081753LOC120095762U1 spliceosomal RNA113374920433749367Rat
1306879Vps26cVPS26 endosomal protein sorting factor C113381346733841883Rat
2528Dyrk1adual specificity tyrosine phosphorylation regulated kinase 1A113389070634009420Rat
40933433LOC120095638uncharacterized LOC120095638113403870834054691Rat
2959Kcnj6potassium inwardly-rectifying channel, subfamily J, member 6113406170234308758Rat
7642969LOC102550239uncharacterized LOC102550239113410389234135702Rat
41381986LOC120095639uncharacterized LOC120095639113427641834285077Rat
1594265Hsp90ab1-ps22heat shock protein 90 alpha family class B member 1, pseudogene 22113434060334342740Rat
11450454LOC108352313uncharacterized LOC108352313113435559134410861Rat
41166587LOC120095565uncharacterized LOC120095565113448276334487531Rat
7712236LOC102550135uncharacterized LOC102550135113449810434579531Rat
621662Kcnj15potassium inwardly-rectifying channel, subfamily J, member 15113457739734621725Rat
621108ErgETS transcription factor ERG113467861434900951Rat
41068989LOC120095800U4 spliceosomal RNA113487271634872838Rat
41221339LOC120095640uncharacterized LOC120095640113500624235012335Rat
1584977Ets2ETS proto-oncogene 2, transcription factor113502153635038322Rat
9160900LOC103693523uncharacterized LOC103693523113506680235079447Rat
11377006LOC108352314uncharacterized LOC108352314113509272635118544Rat
1305454Psmg1proteasome assembly chaperone 1113527608035285541Rat
1309030Brwd1bromodomain and WD repeat domain containing 1113528636435378768Rat
7489015Mir6324microRNA 6324113533182035331940Rat
1307761Hmgn1high mobility group nucleosome binding domain 1113542232835428247Rat
735104Get1guided entry of tail-anchored proteins factor 1113543855535460156Rat
1562512Lca5llebercilin LCA5 like113546064635495133Rat
1563599Sh3bgrSH3 domain binding glutamate-rich protein113550366335527853Rat
1306727B3galt5Beta-1,3-galactosyltransferase 5113558427335630922Rat
7489018Mir6325microRNA 6325113567919635679336Rat
1359642Igsf5immunoglobulin superfamily, member 5113568651335729396Rat
1592358Itgb2l-ps1integrin beta-2-like, pseudogene 1113574170735758826Rat
3271Pcp4Purkinje cell protein 4113575971135861725Rat
619992DscamDS cell adhesion molecule113592192436507100Rat
7740143LOC102551331uncharacterized LOC102551331113622115136233362Rat
41186609Tsnax-ps1translin-associated factor X, pseudogene 1113631775236318634Rat
41158912LOC120095542uncharacterized LOC120095542113635272336363724Rat
41366650LOC120095544uncharacterized LOC120095544113648075436482857Rat
1303241Bace2beta-secretase 2113670744736789550Rat
3127Mx1MX dynamin like GTPase 1113679965936825209Rat
1311662Fam3bFAM3 metabolism regulating signaling molecule B113683153236863902Rat
628821Mx2MX dynamin like GTPase 2113690569836936308Rat
620766Tmprss2transmembrane serine protease 2113693430636973779Rat
41188497LOC120095741small nucleolar RNA SNORA48113705383037053976Rat
3220Oaz1-ps1ornithine decarboxylase antizyme 1, pseudogene 1113708458637085595Rat
11375877LOC108352390uncharacterized LOC108352390113710922437111370Rat
1311691Ripk4receptor-interacting serine-threonine kinase 4113712255537144799Rat
1310055Prdm15PR/SET domain 15113716460837225172Rat
735112C2cd2C2 calcium-dependent domain containing 2113722532137289741Rat
40936948Rps17-ps5ribosomal protein S17, pseudogene 5113729460537308944Rat
1310841Zbtb21zinc finger and BTB domain containing 21113731233737327040Rat
1586131Lrrc57-ps2leucine rich repeat containing 57, pseudogene 2113734419437344901Rat
6495041Fignl2-ps1fidgetin-like 2, pseudogene 1113738458337405340Rat
11415410Pdcd7-ps1programmed cell death 7, pseudogene 1113745712637474155Rat
41156722Nsun3-ps1NOP2/Sun RNA methyltransferase 3, pseudogene 1113746409237477551Rat
2322119Nsun3NOP2/Sun RNA methyltransferase 3113749083237575607Rat
41268022Psrc1-ps1proline and serine rich coiled-coil 1, pseudogene 1113756610637567122Rat
1565472Tmem127l1transmembrane protein 127 like 1113767967537680635Rat
41076501LOC120095714U6 spliceosomal RNA113768280437682913Rat
2320506Eif1a-ps3eukaryotic translation initiation factor 1A, pseudogene 1113783704637894987Rat
1564179Pgk1-ps11phosphoglycerate kinase 1, pseudogene 11113803209138033326Rat
40958082LOC120095759small nucleolar RNA SNORA17113828573538285868Rat
9295737LOC103693547uncharacterized LOC103693547113835449438385411Rat
1583651Pkm-ps15pyruvate kinase M1/2, pseudogene 15113840386538405544Rat
1559516Rps2-ps38ribosomal protein S2, pseudogene 38113842172838422600Rat
7705653LOC102555459uncharacterized LOC102555459113845862338542106Rat
1583614Pes1-ps3pescadillo ribosomal biogenesis factor 1, pseudogene 3113877388338774944Rat
9071267LOC103693548uncharacterized LOC103693548113935295039365668Rat
41132892LOC120095808U6 spliceosomal RNA113948477239484878Rat
1562187Vta1-ps1vesicle trafficking 1, pseudogene 1113961314839614071Rat
1304614Epha6Eph receptor A6113975750140708901Rat
41272276LOC120095545uncharacterized LOC120095545113977562839777087Rat
7604183Acat2-ps1acetyl-CoA acetyltransferase 2, pseudogene 1114038078840382809Rat
41385321LOC120095724U7 small nuclear RNA114054666740546725Rat
1305535Arl6ARF like GTPase 6114071187840738254Rat
1305628Crybg3crystallin beta-gamma domain containing 3114074919840861753Rat
708521Riox2ribosomal oxygenase 2114086136540884782Rat
1584981Nlrp4a-ps1NLR family, pyrin domain containing 4A, pseudogene 1114088428140905699Rat
621564Gabrr3gamma-aminobutyric acid type A receptor subunit rho3114090281240955263Rat
1333369Or5ac25olfactory receptor family 5 subfamily AC member 25114099973441000654Rat
1333619Or5ac24olfactory receptor family 5 subfamily AC member 24114100899041009910Rat
1333309Or5ac23olfactory receptor family 5 subfamily AC member 23114101703341017950Rat
1332924Or5ac23bolfactory receptor family 5 subfamily AC member 23B114103367041034587Rat
1333081Or5ac22olfactory receptor family 5 subfamily AC member 22114105917041060087Rat
1334206Or5ac21olfactory receptor family 5 subfamily AC member 21114107561241076532Rat
1333204Or5ac20-ps1olfactory receptor family 5 subfamily AC member 20, pseudogene 1114111185341112768Rat
1334340Or5h26olfactory receptor family 5 subfamily H member 26114113428641135215Rat
1333449Or5h27olfactory receptor family 5 subfamily H member 27114115137241157144Rat
41029306LOC120095566olfactory receptor 5AC1-like114116051841161438Rat
1334226Or5ac19olfactory receptor family 5 subfamily AC member 19114118427841185201Rat
1333463Olr1537olfactory receptor 1537114121143641212356Rat
1332608Or5h27bolfactory receptor family 5 subfamily H member 27B114123137741232306Rat
1333239Or5h26bolfactory receptor family 5 subfamily H member 26B114124218241243111Rat
1332965Or5k3olfactory receptor family 5 subfamily K member 3114125902641259952Rat
2321335Dppa2l-ps1developmental pluripotency-associated 2 like, pseudogene 1114128999041291084Rat
1334428Or5ac15olfactory receptor family 5 subfamily AC member 15114129629641297216Rat
1332699Or5h25c-ps1olfactory receptor family 5 subfamily H member 25C, pseudogene 1114131677641317700Rat
1333347Or5h25bolfactory receptor family 5 subfamily H member 25B114133311241334035Rat
1334123Or5h25olfactory receptor family 5 subfamily H member 25114135634641357269Rat
1333633Or5h25dolfactory receptor family 5 subfamily H member 25D114136705141367974Rat
1333775Or5h24olfactory receptor family 5 subfamily H member 24114137800041378923Rat
1333231Or5h24bolfactory receptor family 5 subfamily H member 24B114138858541389508Rat
1333850Or5h19-ps1olfactory receptor family 5 subfamily H member 19, pseudogene 1114140506841405998Rat
1333073Or5h18olfactory receptor family 5 subfamily H member 18114140519441423800Rat
1333634Or5bv1-ps1olfactory receptor family 5 subfamily BV member 1, pseudogene 1114142793941428782Rat
1332847Or5h17olfactory receptor family 5 subfamily H member 17114146211641463045Rat
1332676Or5at2-ps1olfactory receptor family 5 subfamily AT member 2, pseudogene 1114148826041489090Rat
1332966Or5h17bolfactory receptor family 5 subfamily H member 17B114149485741503724Rat
1332787Or5at1-ps1olfactory receptor family 5 subfamily AT member 1, pseudogene 1114151110141512226Rat
1332995Or5h17colfactory receptor family 5 subfamily H member 17C114151786541518794Rat
1333626Or5k17olfactory receptor family 5 subfamily K member 17114158879541589748Rat
1333528Or5k16olfactory receptor family 5 subfamily K member 16114160071641601669Rat
1333735Or5k15olfactory receptor family 5 subfamily K member 15114161240141613354Rat
1333804Or5k8olfactory receptor family 5 subfamily K member 8114164417641645105Rat
1333929Or5k14olfactory receptor family 5 subfamily K member 14114166915541670084Rat
1332816Olr1563olfactory receptor 1563114172396541724894Rat
1333068Olr1564olfactory receptor 1564114175630441757230Rat
1588125Or5k1-ps1olfactory receptor family 5 subfamily K member 1, pseudogene 1114182633741827302Rat
41374848LOC120095756small nucleolar RNA SNORA17114184305941843187Rat
1359273Cldnd1claudin domain containing 1114188312041889471Rat
1306639Gpr15G protein-coupled receptor 15114189830041899646Rat
1311817Cpoxcoproporphyrinogen oxidase114193658541946568Rat
1590640Ftdc2ferritin domain containing 2114196794741973373Rat
11424835LOC108352322ferritin heavy chain-like114198171941990330Rat
1303279St3gal6ST3 beta-galactoside alpha-2,3-sialyltransferase 6114206128242121801Rat
11379447LOC108352323uncharacterized LOC108352323114210220042107136Rat
620543Dcbld2discoidin, CUB and LCCL domain containing 2114212552542179927Rat
41319680LOC120095647uncharacterized LOC120095647114212974442136208Rat
1590575Rps28l1ribosomal protein S28 like 1114225453342260302Rat
1589464Mapk3-ps3mitogen activated protein kinase 3, pseudogene 3114235289542364220Rat
1597040Ptma-ps7prothymosin alpha, pseudogene 7114237405442374940Rat
40945973LOC120095648uncharacterized LOC120095648114249835442535259Rat
41238407LOC120095745small nucleolar RNA SNORA17114266317342663305Rat
1309361Col8a1collagen type VIII alpha 1 chain114277685142906432Rat
1309437Cmss1cms1 ribosomal small subunit homolog114293439043232624Rat
1565927Filip1lfilamin A interacting protein 1-like114293735343177085Rat
1306090Tmem30ctransmembrane protein 30C114323966143258506Rat
11393230Rps13-ps3ribosomal protein S13, pseudogene 3114325865143260045Rat
1586130Rpsa-ps2ribosomal protein SA, pseudogene 2114327873543279707Rat
1307925Tbc1d23TBC1 domain family, member 23114330335543361507Rat
41238602Trnaa-agc25transfer RNA alanine (anticodon AGC) 25114331457243314644Rat
11409922LOC108352326ribosome biogenesis protein NSA2 homolog pseudogene114336196643362910Rat
1310494Nit2nitrilase family, member 2114336383943378713Rat
1303049Tomm70translocase of outer mitochondrial membrane 70114337871943417166Rat
11483287LOC108352328uncharacterized LOC108352328114341746543429188Rat
1310935Tmem45a2transmembrane protein 45A2114348350943527025Rat
7674515Rpl5-ps5ribosomal protein L5, pseudogene 5114352181643522837Rat
2320136Ube2i-ps2ubiquitin-conjugating enzyme E2I, pseudogene 2114362998243656632Rat
2323126Lnp1leukemia NUP98 fusion partner 1114366087343678727Rat
2320082Pdcd6ip-ps1programmed cell death 6 interacting protein, pseudogene114369678943697489Rat
6495353Tmem45atransmembrane protein 45A114371330943799526Rat
41302083Tceal9-ps1transcription elongation factor A like 9, pseudogene 1114372690443727543Rat
9999453Rps27a-ps21ribosomal protein S27a, pseudogene 21114373744943738184Rat
1307217Adgrg7adhesion G protein-coupled receptor G7114380810143877539Rat
1309751Tfgtrafficking from ER to golgi regulator114388554243911976Rat
1562717Abi3bpABI family member 3 binding protein114391218744128888Rat
1596981Caprin1-ps1cell cycle associated protein 1, pseudogene 1114427547744278213Rat
708358Impg2interphotoreceptor matrix proteoglycan 2114431883644418382Rat
1305510Senp7SUMO specific peptidase 7114442373344584129Rat
41249040Mrpl45-ps1mitochondrial ribosomal protein L45, pseudogene 1114453673944538285Rat
41063052LOC120095650uncharacterized LOC120095650114456363144582482Rat
1306333Trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit114458438844589466Rat
41314188LOC120095729small nucleolar RNA SNORA70114458628844586425Rat
1563775PcnpPEST proteolytic signal containing nuclear protein114459276644607372Rat
1308275Zbtb11zinc finger and BTB domain containing 11114459869444652559Rat
11463329Gng5-ps4G protein subunit gamma 5, pseudogene 4114462721344627733Rat
41278412LOC120095738small nucleolar RNA SNORA29114463205844632191Rat
10395320Zbtb11os1zinc finger and BTB domain containing 11, opposite strand 1114465034344652085Rat
621191Rpl24ribosomal protein L24114465393744659346Rat
1307400Cep97centrosomal protein 97114468350344711471Rat
1584648Nxpe3neurexophilin and PC-esterase domain family, member 3114472690544777694Rat
41055807Ap3s1-ps1adaptor related protein complex 3 subunit sigma 1, pseudogene 1114475353644754188Rat
1310834NfkbizNFKB inhibitor zeta114478267644810722Rat
41021352LOC120095713U6 spliceosomal RNA114485825244858353Rat
11512909LOC108352329uncharacterized LOC108352329114487172844878921Rat
41380577LOC120095651uncharacterized LOC120095651114489505144900728Rat
11459578Trnap-agg13transfer RNA proline (anticodon AGG) 13114541892345418997Rat
1308138Zpld1zona pellucida-like domain containing 1114548288345524555Rat
41034586LOC120095796U2 spliceosomal RNA114588069545880867Rat
2321510Eef1akmt4-ps1EEF1A lysine methyltransferase 4, pseudogene 1114632249946324498Rat
40982162LOC120095720small nucleolar RNA SNORA71114638078246380914Rat
40936001LOC120095816U6 spliceosomal RNA114659427246594378Rat
41045040LOC120095758small nucleolar RNA SNORA17114660723246607355Rat
41263068LOC120095767small nucleolar RNA SNORA17114660766746607801Rat
41081391LOC120095804U5 spliceosomal RNA114715126247151354Rat
1564519Hmgb2l1high mobility group box 2-like 1114725258347253646Rat
41102808LOC120095652uncharacterized LOC120095652114730688947314714Rat
1586129Nr5a2-ps2nuclear receptor subfamily 5, group A, member 2, pseudogene 2114750371947505369Rat
41240667LOC120095769small nucleolar RNA SNORA17114778177647781888Rat
1586128Cluap1-ps1clusterin associated protein 1, pseudogene 1114782705248009762Rat
41234104LOC120095771small nucleolar RNA SNORA17114798842447988511Rat
619972Alcamactivated leukocyte cell adhesion molecule114833612348536296Rat
620535CblbCbl proto-oncogene B114858987848756940Rat
6487995LOC100912248uncharacterized LOC100912248114880712248808230Rat
9148111LOC103693556uncharacterized LOC103693556114963670549651884Rat
40962625LOC120095787U2 spliceosomal RNA114971117149711350Rat
6504246LOC100909405uncharacterized LOC100909405115007456050080929Rat
40949177LOC120095653uncharacterized LOC120095653115011230950118393Rat
7583323LOC102548829uncharacterized LOC102548829115014160950243532Rat
1559779Ccdc54coiled-coil domain containing 54115022421650227313Rat
41214868LOC120095654uncharacterized LOC120095654115023706450243649Rat
41375836LOC120095655uncharacterized LOC120095655115029394850317209Rat
41178532LOC120095707U6 spliceosomal RNA115034518850345302Rat
1309769BbxBBX high mobility group box domain containing115038124950628934Rat
1585855Rpl26-ps9ribosomal protein L26, pseudogene 9115055197650552471Rat
41010029LOC120095656uncharacterized LOC120095656115084648050881941Rat
2308Cd47Cd47 molecule115090605250970000Rat
11492405LOC108352331uncharacterized LOC108352331115100272051011181Rat
1305947Ift57intraflagellar transport 57115105152051124909Rat
11472061Hhla2HHLA2 member of B7 family115125768151271408Rat
6501029Myh15l1myosin, heavy chain 15 like 1115133487051461768Rat
6500618LOC100909977leukocyte surface antigen CD47-like115155488051619586Rat
1565858Myh15myosin, heavy chain 15115162192451763037Rat
41306467LOC120095735small nucleolar RNA SNORA44115167372751673834Rat
1310335Cip2acellular inhibitor of PP2A115179214351823016Rat
1563278Dzip3DAZ interacting zinc finger protein 3115182323551893353Rat
727934Retnlgresistin-like gamma115193094851932680Rat
68349Retnlaresistin like alpha115196172651963527Rat
1624215Retnlbresistin like beta115198348251985368Rat
1563011Trat1T cell receptor associated transmembrane adaptor 1115203575052077805Rat
1565610Morc1MORC family CW-type zinc finger 1115217876952384255Rat
11414924LOC10835239360S ribosomal protein L9 pseudogene115238857852389155Rat
1588602Rplp0-ps8ribosomal protein lateral stalk subunit P0, pseudogene 8115246717852468125Rat
1595098Rps15-ps14ribosomal protein S15, pseudogene 14115252353152523970Rat
1589201Dppa2developmental pluripotency-associated 2115254902452556740Rat
1595070Dppa4developmental pluripotency associated 4115257027952578779Rat
2322285H3f3a-ps9H3.3 histone A, pseudogene 9115264725052648006Rat
40927137LOC120095721U7 small nuclear RNA115269231252692371Rat
1593835Eif4a1-ps4eukaryotic translation initiation factor 4A1, pseudogene 4115276342352764465Rat
9460259LOC103693561zinc finger CCHC domain-containing protein 10 pseudogene115288807452888596Rat
41135138LOC120095817U6 spliceosomal RNA115293808652938192Rat
1588023Cfl1-ps11cofilin 1, pseudogene 11115307688853077384Rat
1593796Rpl3-ps3ribosomal protein L3, pseudogene 3115323777453279583Rat
40998757LOC120095568uncharacterized LOC120095568115335828053373353Rat
41034013LOC120095820U6 spliceosomal RNA115339016753390269Rat
1588603Pgd-ps1phosphogluconate dehydrogenase, pseudogene 1115415448854155991Rat
1309516Nectin3nectin cell adhesion molecule 3115436271254469351Rat
41230093LOC120095743small nucleolar RNA SNORA48115452518154525320Rat
1592613Hnrnpa1-ps30heterogeneous nuclear ribonucleoprotein A1, pseudogene 30115463775754691446Rat
1565249Cd96CD96 molecule115470229054776618Rat
9378503Zbed2-ps1zinc finger, BED-type containing 2, pseudogene 1115473381454734698Rat
1563504Plcxd2phosphatidylinositol-specific phospholipase C, X domain containing 2115480097754853348Rat
1591402Phldb2pleckstrin homology-like domain, family B, member 2115485917355078212Rat
7504264LOC102552450uncharacterized LOC102552450115497595854980672Rat
41314974LOC120095778small nucleolar RNA U13115504225055042354Rat
1308084Abhd10abhydrolase domain containing 10, depalmitoylase115508127355095044Rat
69301Tagln3transgelin 3115509988755113457Rat
1304655Tmprss7transmembrane serine protease 7115512799255166597Rat
1591333C11h3orf52similar to human chromosome 3 open reading frame 52115516698655192273Rat
1591321Gcsamgerminal center-associated, signaling and motility115519575755207011Rat
1309075Slc9c1solute carrier family 9 member C1115521177455278285Rat
1590262Traf4-ps1Tnf receptor associated factor 4, pseudogene 1115527834755280231Rat
1590252Cd200l2CD200 molecule like 2115527985355326753Rat
1590201Cd200l1CD200 molecule like 1115535043355401528Rat
3104Cd200Cd200 molecule115541016655437527Rat
1590173Paics-ps6phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 6115554545255546806Rat
1303280BtlaB and T lymphocyte associated115556368355588187Rat
708464Atg3autophagy related 3115562491455653249Rat
1564361Slc35a5solute carrier family 35, member A5115565337655674476Rat
69421Ccdc80coiled-coil domain containing 80115568516555718827Rat
7716883LOC102551825uncharacterized LOC102551825115572602055738868Rat
7594145LOC102551884uncharacterized LOC102551884115574680755767560Rat
41359196LOC120095569thymosin beta-10-like115580651255807153Rat
1563387Cd200r1lCD200 receptor 1-like115584263255860914Rat
6486401Syncrip-ps1synaptotagmin binding, cytoplasmic RNA interacting protein, pseudogene 1115587732455878959Rat
61837Cd200r1CD200 receptor 1115588693755921217Rat
7654125Riox2-ps1ribosomal oxygenase 2, pseudogene 1115589665455898921Rat
1310025Gtpbp8GTP binding protein 8115594577855955743Rat
1311458Nepronucleolus and neural progenitor protein115595826555970432Rat
9282111LOC103693572uncharacterized LOC103693572115597763856002987Rat
7682768LOC102552306uncharacterized LOC102552306115605529456057920Rat
1304550BocBOC cell adhesion associated, oncogene regulated115612269756198060Rat
1559942Cfap44cilia and flagella associated protein 44115619977256283964Rat
41172124LOC120095657uncharacterized LOC120095657115624458756245865Rat
1310729Spice1spindle and centriole associated protein 1115628929156332382Rat
1559616Sidt1SID1 transmembrane family, member 1115636278856459939Rat
1560175Usf3upstream transcription factor family member 3115647073856529736Rat
41393344LOC120095793U2 spliceosomal RNA115648531256485489Rat
1310944Naa50N(alpha)-acetyltransferase 50, NatE catalytic subunit115653836656560842Rat
1596464Atp6v1aATPase H+ transporting V1 subunit A115656144456614694Rat
41343076LOC120095658uncharacterized LOC120095658115656294256573857Rat
1305433Gramd1cGRAM domain containing 1C115663322956718570Rat
1303254Zdhhc23zinc finger DHHC-type palmitoyltransferase 23115671870256735063Rat
1566314Ccdc191coiled-coil domain containing 191115673565556806372Rat
1310054Qtrt2queuine tRNA-ribosyltransferase accessory subunit 2115680641756837239Rat
41170694LOC120095768small nucleolar RNA SNORA17115686809356868177Rat
2521Drd3dopamine receptor D3115687968956931901Rat
1563191TigitT cell immunoreceptor with Ig and ITIM domains115702902457046627Rat
1560387Zbtb20zinc finger and BTB domain containing 20115705212957791214Rat
2325438Mir568microRNA 568115705397857054073Rat
40973116LOC120095548uncharacterized LOC120095548115723499457248198Rat
41164990LOC120095546uncharacterized LOC120095546115746866457489060Rat
41133424LOC120095547uncharacterized LOC120095547115758193857588372Rat
1583712Tnk1-ps1tyrosine kinase, non-receptor, 1, pseudogene 1115789125957893134Rat
40944194LOC120095788U2 spliceosomal RNA115792982857929976Rat
62071Gap43growth associated protein 43115837637158470047Rat
71102Lsamplimbic system-associated membrane protein115854753360717328Rat
41293959LOC120095737small nucleolar RNA SNORA32115884652858846649Rat
11486206LOC108352336uncharacterized LOC108352336115964128259651262Rat
41371114Ppid-ps8peptidylprolyl isomerase D, pseudogene 8116046435560479003Rat
41182919LOC120095810U6 spliceosomal RNA116143012061430225Rat
11512794LOC108352339uncharacterized LOC108352339116145208261459645Rat
1308758Igsf11immunoglobulin superfamily, member 11116173313961884059Rat
41352287LOC120095708U6 spliceosomal RNA116184372361843823Rat
1563835Rpl27l7ribosomal protein L27 like 7116191118061911639Rat
1586127Prdx6-ps3peroxiredoxin 6, pseudogene 3116191817161919429Rat
1306995Tex55testis expressed 55116192730461942666Rat
1307806Upk1buroplakin 1B116195368761991029Rat
1307880B4galt4beta-1,4-galactosyltransferase 4116199580762021751Rat
1306093Arhgap31Rho GTPase activating protein 31116203863562151564Rat
1306421Tmem39atransmembrane protein 39a116216063162189964Rat
1306248Poglut1protein O-glucosyltransferase 1116219860062226446Rat
9463950LOC103693581uncharacterized LOC103693581116222587162228955Rat
1359380Timmdc1translocase of inner mitochondrial membrane domain containing 1116222899062259389Rat
2314Cd80Cd80 molecule116225454362293414Rat
11386340LOC108352341uncharacterized LOC108352341116229364262297718Rat
2052AdprhADP-ribosylarginine hydrolase116229983162306170Rat
621261Pla1aphospholipase A1 member A116232011262357779Rat
735226Popdc2popeye domain cAMP effector 2116235184362398688Rat
620548Cox17cytochrome c oxidase copper chaperone COX17116240073362406507Rat
1305539Cfap91cilia and flagella associated protein 91116241361362457281Rat
69057Nr1i2nuclear receptor subfamily 1, group I, member 2116246021362496665Rat
70982Gsk3bglycogen synthase kinase 3 beta116249899762648665Rat
41007679LOC120095744small nucleolar RNA SNORA17116258475362584884Rat
708438Gpr156G protein-coupled receptor 156116272263262815402Rat
9272262Ube2d2-ps1ubiquitin-conjugating enzyme E2D 2, pseudogene 1116281973262820722Rat
1307440Lrrc58leucine rich repeat containing 58116285050762862829Rat
7554618Btnl12butyrophilin-like 12116286323962879705Rat
68955Fstl1follistatin-like 1116289539162948581Rat
1565413Rps11-ps13ribosomal protein S11, pseudogene 13116299121062991770Rat
1307072Ndufb4NADH:ubiquinone oxidoreductase subunit B4116306372363070426Rat
1561232Krt8-ps1keratin 8, pseudogene 1116307326963075284Rat
1308757Hgdhomogentisate 1, 2-dioxygenase116308675063138325Rat
1306436Rabl3RAB, member of RAS oncogene family-like 3116315328163182240Rat
1306851Gtf2e1general transcription factor IIE subunit 1116318207363215349Rat
1311561Stxbp5lsyntaxin binding protein 5L116333466763654270Rat
40991866LOC120095798U2 spliceosomal RNA116337850263378629Rat
1309795PolqDNA polymerase theta116367379663775905Rat
7724376Rnf138-ps4ring finger protein 138, pseudogene 4116372371663724313Rat
9342064Gng10-ps1G protein subunit gamma 10, pseudogene 1116375292663753977Rat
1309781Fbxo40F-box protein 40116379445263812697Rat
1304754Hcls1hematopoietic cell specific Lyn substrate 1116381748263840943Rat
708429Golgb1golgin B1116384317963900665Rat
1310069Iqcb1IQ motif containing B1116390559563960141Rat
628879Eaf2ELL associated factor 2116396020064004610Rat
61972Slc15a2solute carrier family 15 member 2116401418264043228Rat
1594835Rngtt-ps1RNA guanylyltransferase and 5'-phosphatase, pseudogene 1116406295964064855Rat
1307792Ildr1immunoglobulin-like domain containing receptor 1116408577464118760Rat
628714Cd86CD86 molecule116414219364200816Rat
2277Casrcalcium-sensing receptor116423525164304811Rat
1307831Stfa3stefin A3116435372264358864Rat
41129596LOC120095716U6 spliceosomal RNA116435892564359027Rat
1594822Csta3cystatin A family member 3116437420264381603Rat
41211213LOC120095717U6 spliceosomal RNA116438166664381768Rat
2323897Stfa3l-ps1stefin A3 like, pseudogene 1116439580964400614Rat
41169778LOC120095709U6 spliceosomal RNA116444055264440656Rat
1303106Stfa2l1stefin A2-like 1116444079264444858Rat
41055433LOC120095719U6 spliceosomal RNA116446487564464975Rat
2323715Cstdc4cystatin domain containing 4116448057164485848Rat
1560676Stfa2l2stefin A2-like 2116449815164500576Rat
41091386LOC120095715U6 spliceosomal RNA116451939364519497Rat
41304704LOC120095659stefin-2-like116453155664533991Rat
1562186Stfa2stefin A2116454445164549450Rat
6491049Stfa2l3stefin A2-like 3116458840164593418Rat
1302997Stfa3l1stefin A3-like 1116460868364615902Rat
1309603Cstacystatin A116462048364631488Rat
41228426LOC120095712U6 spliceosomal RNA116463155164631651Rat
6490131Rps2-ps8ribosomal protein S2, pseudogene 8116464004564640815Rat
1565297Ranbp1l1RAN binding protein 1 like 1116464663464647446Rat
1564582Mix23mitochondrial matrix import factor 23116466071164681000Rat
1590883Fam162afamily with sequence similarity 162, member A116468097864709865Rat
1308567Wdr5bWD repeat domain 5B116471094564712804Rat
735064Kpna1karyopherin subunit alpha 1116471584464774647Rat
1307534Parp9poly (ADP-ribose) polymerase family, member 9116478097764814995Rat
40959898Trnaa-agc35transfer RNA alanine (anticodon AGC) 35116480028964800361Rat
1565144Dtx3ldeltex E3 ubiquitin ligase 3L116481492664824539Rat
1592279Casp6-ps1caspase 6, pseudogene 1116489204564897556Rat
1310490Parp14poly (ADP-ribose) polymerase family, member 14116490284864934916Rat
620870Hspbap1HSPB1 associated protein 1116494008964994753Rat
41191110LOC120095731small Cajal body-specific RNA 8116495846164958591Rat
1310939Slc49a4solute carrier family 49 member 4116499562965068929Rat
11462401LOC108352343uncharacterized LOC108352343116501296365016807Rat
1591093Mta2-ps1metastasis associated 1 family, member 2, pseudogene 1116508452065086381Rat
1308914Sema5bsemaphorin 5B116510253265225456Rat
40961418LOC120095662uncharacterized LOC120095662116526803365272172Rat
1359236Pdia5protein disulfide isomerase family A, member 5116527215265359087Rat
41290751LOC120095661uncharacterized LOC120095661116532415365330416Rat
41086347LOC120095660uncharacterized LOC120095660116534790865351093Rat
621659Sec22aSEC22 homolog A, vesicle trafficking protein116540258365462329Rat
7510056LOC102551038uncharacterized LOC102551038116546293865491276Rat
71014Adcy5adenylate cyclase 5116547161265618877Rat
1306337Hacd23-hydroxyacyl-CoA dehydratase 2116566767165762903Rat
1310915Mylkmyosin light chain kinase116578300866030239Rat
40965365LOC120095664uncharacterized LOC120095664116586556365871875Rat
41247309Kxd1-ps1KxDL motif containing 1, pseudogene 1116594368665944219Rat
1562189Ccdc14coiled-coil domain containing 14116605206366087915Rat
7670747LOC102549131non-histone chromosomal protein HMG-17-like116605924866059682Rat
41280574LOC120095665uncharacterized LOC120095665116608793466094761Rat
1310675Ropn1rhophilin associated tail protein 1116609785466127148Rat
621865Kalrnkalirin, RhoGEF kinase116619815566803166Rat
41339693LOC120095553uncharacterized LOC120095553116635073066366306Rat
40965619LOC120095552uncharacterized LOC120095552116642486366426504Rat
1311908Umpsuridine monophosphate synthetase116680610766816520Rat
628869Itgb5integrin subunit beta 5116682842866944231Rat
11447782Dynll1-ps3dynein light chain LC8-type 1, pseudogene 3116694882766949432Rat
708547Muc13mucin 13, cell surface associated116695720866980264Rat
1564641Heg1heart development protein with EGF-like domains 1116700695467095020Rat
628730Slc12a8solute carrier family 12, member 8116711687667266548Rat
62063Zfp148zinc finger protein 148116727645567385803Rat
40926308LOC120095732small nucleolar RNA SNORA36 family116736888067369010Rat
1309763Snx4sorting nexin 4116746087267518143Rat
41372264LOC120095666uncharacterized LOC120095666116751817267522772Rat
1307294Osbpl11oxysterol binding protein-like 11116753366967616795Rat
1311465Lmlnleishmanolysin like peptidase116765624167725889Rat
2323795Rpl35aribosomal protein L35A116772603167729953Rat
1311606IqcgIQ motif containing G116773011767771170Rat
1306200Lrch3leucine rich repeats and calponin homology domain containing 3116777249967872269Rat
1306899Fyttd1forty-two-three domain containing 1116787796767907500Rat
1305422Rubcnrubicon autophagy regulator116790753467964347Rat
9415494LOC103693588uncharacterized LOC103693588116797443067979898Rat
1304865Muc20mucin 20, cell surface associated116798781668001496Rat
621331Muc4mucin 4, cell surface associated116800824568053242Rat
40940605LOC120095667uncharacterized LOC120095667116810548168114450Rat
1305957Tnk2tyrosine kinase, non-receptor, 2116811472568154254Rat
41096241LOC120095795U2 spliceosomal RNA116813511468135233Rat
70488Tfrctransferrin receptor116816341368185257Rat
1597039Rplp0-ps12ribosomal protein lateral stalk subunit P0, pseudogene 12116818532968194901Rat
41180783LOC120095807U6 spliceosomal RNA116820041468200520Rat
7677093LOC102547162uncharacterized LOC102547162116824913268272391Rat
41048265LOC120095668uncharacterized LOC120095668116825634668261022Rat
1309014Zdhhc19zinc finger DHHC-type palmitoyltransferase 19116827784768289110Rat
1311100Slc51asolute carrier family 51 member A116829908668313485Rat
70515Pcyt1aphosphate cytidylyltransferase 1A, choline116831386068357828Rat
41349001LOC120095669uncharacterized LOC120095669116832028568327078Rat
1563597Dynlt2bdynein light chain Tctex-type 2B116835913868367573Rat
1560486Tm4sf19transmembrane 4 L six family member 19116837294568386192Rat
1306346Ubxn7UBX domain protein 7116842789668460100Rat
1585168Rnf168ring finger protein 168116848631368508296Rat
1562500Smco1single-pass membrane protein with coiled-coil domains 1116851211368514999Rat
1559546Wdr53WD repeat domain 53116854264768551148Rat
1311861Fbxo45F-box protein 45116855143068567053Rat
41167741LOC120095776small nucleolar RNA SNORA79116855477768554919Rat
41329650LOC120095670uncharacterized LOC120095670116858149168588456Rat
1310771Nrrosnegative regulator of reactive oxygen species116862864168646152Rat
621352Cep19centrosomal protein 19116867786968687117Rat
1307289Pigxphosphatidylinositol glycan anchor biosynthesis, class X116868712668703067Rat
61953Pak2p21 (RAC1) activated kinase 2116870794068768816Rat
41139493LOC120095749small nucleolar RNA SNORA17116872013668720265Rat
1304604Senp5SUMO specific peptidase 5116878469968819569Rat
1596188Ncbp2nuclear cap binding protein subunit 2116882102668829863Rat
41269461Ncbp2as2NCBP2 antisense 2 (head to head)116882995068830715Rat
1307107Pigzphosphatidylinositol glycan anchor biosynthesis, class Z116883184768851798Rat
11425590LOC108352349uncharacterized LOC108352349116884425868860802Rat
7682905LOC102549772uncharacterized LOC102549772116886436168867008Rat
1308155Meltfmelanotransferrin116888444668906300Rat
41235646LOC120095672uncharacterized LOC120095672116889257068895856Rat
2505Dlg1discs large MAGUK scaffold protein 1116891188369103230Rat
7640211LOC102550974uncharacterized LOC102550974116926148069271169Rat
41264294LOC120095674uncharacterized LOC120095674116927084769290769Rat
620131Bdh13-hydroxybutyrate dehydrogenase 1116930253469343173Rat
2137Apodapolipoprotein D116943126169452306Rat
621099Ppp1r2protein phosphatase 1, regulatory (inhibitor) subunit 2116947267669494468Rat
1596124Chchd2l2-ps3coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2, pseudogene 3116948069869481154Rat
1562939Acap2ArfGAP with coiled-coil, ankyrin repeat and PH domains 2116953848769654156Rat
1308154Xxylt1xyloside xylosyltransferase 1116965848169790938Rat
41178581LOC120095678uncharacterized LOC120095678116975363169759747Rat
40960446LOC120095677uncharacterized LOC120095677116977949969782866Rat
7595638LOC102553680uncharacterized LOC102553680116980454269837672Rat
41336808LOC120095679uncharacterized LOC120095679116993900569958053Rat
41091877LOC120095680uncharacterized LOC120095680116998141070023987Rat
7750754LOC102549085uncharacterized LOC102549085117006936870115798Rat
1304790Fam43afamily with sequence similarity 43, member A117012825370131401Rat
1309089Lsg1large 60S subunit nuclear export GTPase 1117013291970168526Rat
1563737Tmem44transmembrane protein 44117018112070216958Rat
7555728LOC102548792uncharacterized LOC102548792117018599870189950Rat
40995627LOC120095681uncharacterized LOC120095681117023491270238937Rat
40991205LOC120095682uncharacterized LOC120095682117032832870335873Rat
41301821LOC120095571uncharacterized LOC120095571117034029270344905Rat
41107307LOC120095683uncharacterized LOC120095683117035450370358842Rat
1562415Rps26-ps13ribosomal protein S26, pseudogene 13117035922770359796Rat
1590881Atp13a3ATPase 13A3117036499870442005Rat
2724Gp5glycoprotein V (platelet)117044361370446705Rat
70551Lrrc15leucine rich repeat containing 15117046981770484268Rat
1305170Cpn2carboxypeptidase N subunit 2117048605470495937Rat
9097663LOC103690765extensin-like117060818570608934Rat
1565541Elob-ps6elongin B, pseduogene 6117061778170618341Rat
7542669LOC102554403uncharacterized LOC102554403117064419670656791Rat
7569107LOC102547306uncharacterized LOC102547306117065946470675176Rat
62081Hes1hes family bHLH transcription factor 1117070576370708176Rat
41169533LOC120095684uncharacterized LOC120095684117074016670743401Rat
7585592LOC102547530uncharacterized LOC102547530117082178270842973Rat
11453386LOC108352352uncharacterized LOC108352352117088685470910339Rat
708423Opa1OPA1, mitochondrial dynamin like GTPase117110810071185170Rat
1306927Atp13a4ATPase 13A4117122219671359933Rat
2322532Il13ra1-ps1interleukin 13 receptor subunit alpha 1, pseudogene 1117125503571258723Rat
7508589LOC102552083uncharacterized LOC102552083117126345071269923Rat
1306792Atp13a5ATPase 13A5117137638871515789Rat
1309485Plaat1phospholipase A and acyltransferase 1117151749271537142Rat
1596034Cyld-ps2CYLD lysine 63 deubiquitinase, pseudogene 2117170499271713933Rat
1559643Mb21d2Mab-21 domain containing 2117182574871924770Rat
11433872LOC10835239960S ribosomal protein L26-like 1 pseudogene117196655971967694Rat
620163Fgf12fibroblast growth factor 12117199715172564757Rat
41183084LOC120095792U2 spliceosomal RNA117248655372486710Rat
727841Ccdc50coiled-coil domain containing 50117333279873395333Rat
7542563LOC102548576uncharacterized LOC102548576117339851173403897Rat
7735872LOC102557186uncharacterized LOC102557186117340667873420224Rat
727977Uts2burotensin 2B117342438573439429Rat
1303110Ostnosteocrin117344216773478498Rat
1589781Eef1a1-ps11eukaryotic translation elongation factor 1 alpha 1, pseudogene 11117363323773634788Rat
1563170Gmncgeminin coiled-coil domain containing117383625573847698Rat
2893Il1rapinterleukin 1 receptor accessory protein117406299974199530Rat
41024616LOC120095686uncharacterized LOC120095686117406563674081511Rat
2322856Tmem207transmembrane protein 207117425104274270180Rat
620322Cldn16claudin 16117429029874309588Rat
1594670Pabpc4-ps2poly(A) binding protein, cytoplasmic 4, pseudogene 2117439745074399183Rat
68422Cldn1claudin 1117442156974436728Rat
41123245Rpl10-ps11ribosomal protein L10, pseudogene 11117446751274475789Rat
2322514Abt1-ps1activator of basal transcription 1, pseudogene 1117456872274569685Rat
1304568P3h2prolyl 3-hydroxylase 2117463426774775422Rat
9432497LOC103690757macrophage-capping protein pseudogene117464701374710453Rat
620863Tp63tumor protein p63117483885875049764Rat
2322462Rtraf-ps1RNA transcription, translation and transport factor, pseudogene 1117506032475216590Rat
1306226Tprg1tumor protein p63 regulated 1117532247075449907Rat
7642671LOC102554451uncharacterized LOC102554451117569607875714051Rat
1561572Sf3a2-ps1splicing factor 3A subunit 2, pseudogene 1117576854875769907Rat
1310535LppLIM domain containing preferred translocation partner in lipoma117578732676426646Rat
6499341LOC100910319uncharacterized LOC100910319117581962075823992Rat
41035465LOC120095763small nucleolar RNA SNORA17117591194175912071Rat
2325461Mir28microRNA 28117597552375975608Rat
2318248LOC10036583940S ribosomal protein S3a-like117614280076143706Rat
11373170LOC108352383uncharacterized LOC108352383117618324776193533Rat
41248894LOC120095725U7 small nuclear RNA117641296876413034Rat
10395319LpposLIM domain containing preferred translocation partner in lipoma, opposite strand117642541576426512Rat
1563535Myl6-ps5myosin light chain 6, pseudogene 5117644843876448787Rat
7568858LOC102553750uncharacterized LOC102553750117659112176596688Rat
41118012LOC120095687uncharacterized LOC120095687117661705876630585Rat
9251123LOC103690608uncharacterized LOC103690608117664822476657835Rat
7656435LOC102553356uncharacterized LOC102553356117671128176721105Rat
41287362LOC120095689uncharacterized LOC120095689117683813476853989Rat
1309345Bcl6BCL6, transcription repressor117685409076877389Rat
1565722Rtp2receptor (chemosensory) transporter protein 2117691790476930760Rat
3761Sstsomatostatin117695689676958173Rat
40947157Rpl13a-ps5ribosomal protein L13A, pseudogene 5117708077777081566Rat
1564585Ctdsp1-ps1CTD small phosphatase 1, pseudogene 1117713290877133863Rat
1306974Rtp4receptor (chemosensory) transporter protein 4117723734177249194Rat
620213Masp1MBL associated serine protease 1117733479477405271Rat
1560980Rtp1receptor (chemosensory) transporter protein 1117742298277425498Rat
9082951Ahcy-ps11adenosylhomocysteinase, pseudogene 11117748342577484973Rat
41197952LOC120095747small nucleolar RNA SNORA17117749744877497579Rat
2319156Mast2-ps1microtubule associated serine/threonine kinase 2, pseudogene 1117749966677502443Rat
3676St6gal1ST6 beta-galactoside alpha-2,6-sialyltransferase 1117752683777653474Rat
7644981St6gal1lST6 beta-galactoside alpha-2,6-sialyltransferase 1 like117765253077658971Rat
41048357LOC120095690uncharacterized LOC120095690117765910477672704Rat
628748Adipoqadiponectin, C1Q and collagen domain containing117772191277735644Rat
1310142Rfc4replication factor C subunit 4117774964277764123Rat
1309225Eif4a2eukaryotic translation initiation factor 4A2117776412677770810Rat
41216067Snora4small nucleolar RNA, H/ACA box 4117776632577766464Rat
41192302LOC120095726small nucleolar RNA SNORA63117776665477766782Rat
41259569Snora81small nucleolar RNA, H/ACA box 81117776757977767756Rat
41281933LOC120095727small nucleolar RNA SNORA63117776800277768126Rat
41145464Snord2small nucleolar RNA, C/D box 2117776947577769543Rat
41291360H3f3a-ps2H3.3 histone A, pseudogene 2117780108777801454Rat
40955254Ccnb1ip1-ps4cyclin B1 interacting protein 1, pseudogene 4117780357577804448Rat
1359376Kng1kininogen 1117781275777835555Rat
1584955Prkaa1-ps2protein kinase AMP-activated catalytic subunit alpha 1, pseudogene 2117788197177883466Rat
41297945Prkaa1-ps1protein kinase AMP-activated catalytic subunit alpha 1, pseudogene 1117788807377897420Rat
2980Kng2kininogen 2117791387677936247Rat
1583711Ccnb1ip1-ps2cyclin B1 interacting protein 1, pseudogene 2117794408177945086Rat
1594590Kng2l1kininogen 2-like 1117797879578002976Rat
11471078LOC108352357uncharacterized LOC108352357117800522178012389Rat
1594108Ldha-ps15lactate dehydrogenase A, pseudogene 15117802245478023501Rat
1594092Hrgl1histidine-rich glycoprotein like 1117803937178049353Rat
619808Hrghistidine-rich glycoprotein117805448878069402Rat
69293Fetubfetuin B117808215878093022Rat
2075Ahsgalpha-2-HS-glycoprotein117812138878127998Rat
1307373Dnajb11DnaJ heat shock protein family (Hsp40) member B11117815175078168259Rat
1309604Tbccd1TBCC domain containing 1117816838678205314Rat
1587483Crygscrystallin, gamma S117820717078212273Rat
6489863LOC100911962uncharacterized LOC100911962117824763278249722Rat
2318335Hmgn2-ps1high mobility group nucleosomal binding domain 2, pseudogene 1117832119978321970Rat
7738503LOC102552590uncharacterized LOC102552590117837728378402994Rat
2499Dgkgdiacylglycerol kinase, gamma117838421278579158Rat
41061597LOC120095691uncharacterized LOC120095691117849171778496661Rat
1309590Etv5ETS variant transcription factor 5117860861878666221Rat
11407001Trnam-cau3transfer RNA methionine (anticodon CAU) 3117867870078678771Rat
40999098LOC120095692uncharacterized LOC120095692117869188878709582Rat
1588683Psme3-ps4proteasome activator subunit 3, pseudogene 4117877350878774583Rat
1559972Rpl27al7ribosomal protein L27A like 7117878105878781581Rat
619886Tra2btransformer 2 beta117878888078807252Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10911D11Wox3186115543703355437217Ratregion
11026D11Wox9153113708449637084649Ratregion
34112D11Mgh4194115980262259802794Ratregion
34725D11Mgh3168116642214866422316Ratregion
34727D11Mgh9169116297952662979675Ratregion
11291D11Mgh7161117757016877570330Ratregion
11292D11Got72144117757022577570369Ratregion
11343D11Wox2156117695623676956380Ratregion
11344D11Arb1223117695623576956458Ratregion
33642D11Mit1123113491804134918164Ratregion
33642D11Mit1123113491804134918164Ratregion
36065D11Rat6156114428575944285911Ratregion
36095D11Rat7156114545932345459484Ratregion
36281D11Rat4162116279034262790509Ratregion
36342D11Mit9256115938586459386120Ratregion
36346D11Mit10229113283509832835327Ratregion
37516D11Rat39202113714899437149196Ratregion
35224D11Rat23174113765532137655495Ratregion
35441D11Rat48235113718413537184372Ratregion
36820D11Rat9162113910762339107778Ratregion
37096D11Rat92149117410677274106899Ratregion
37904D11Rat36136113250788932508021Ratregion
37942D11Rat46178117885132978851519Ratregion
34793D11Rat11150113279608632796236Ratregion
34912D11Rat30167117449920974499378Ratregion
34987D11Rat97134113410700034107128Ratregion
34995D11Rat5138115493098254931120Ratregion
35094D11Rat2145116752590367526048Ratregion
35154D11Rat102246116073711360737373Ratregion
35933D11Rat12145113123913431239277Ratregion
35953D11Rat37164117211751372117673Ratregion
35955D11Rat38171116032465660324829Ratregion
39698D11Rat67143114480316144803318Ratregion
39808D11Rat85249114030416940304418Ratregion
38284D11Rat47211117063319470633407Ratregion
40380D11Rat62173116771505867715230Ratregion
40546D11Rat71162114094618840946344Ratregion
40550D11Rat60171117161796871618130Ratregion
40678D11Rat59213117130873871308949Ratregion
38558D11Rat64237116282421462824451Ratregion
38672D11Rat51239117026245170262681Ratregion
40010D11Rat63249116583979965840002Ratregion
40048D11Rat58164117687881276878990Ratregion
40082D11Rat82173117847461278474785Ratregion
40158D11Rat65167115513672955136892Ratregion
38964D11Rat42102117688121076881304Ratregion
39084D11Rat93240116611332166113562Ratregion
39198D11Rat35230113610921436109441Ratregion
39562D11Rat84149113765532437655473Ratregion
41952D11Arb2199117747324577473444Ratregion
41954D11Arb4236116642214166422377Ratregion
41240D11Rat83147116213833062138486Ratregion
41256D11Rat61165116944607069446234Ratregion
41428D11Rat68156114578037245780540Ratregion
41450D11Rat72134113248934832489473Ratregion
41482D11Rat57170117420421074204382Ratregion
42950D11Rat109200114239671342396899Ratregion
42952D11Rat107138116549730365497453Ratregion
42953D11Rat94203116582640665826598Ratregion
42954D11Rat115173116861141968611592Ratregion
42955D11Rat106132116834015468340286Ratregion
42956D11Rat105205117113489671135104Ratregion
42957D11Rat104237117429126074291612Ratregion
42375D11Rat114243113332269233322937Ratregion
42376D11Rat117115117648357876483653Ratregion
40822D11Rat70236113808380838084050Ratregion
40938D11Rat56195117571807775718276Ratregion
41634D11Rat96171114191806341918216Ratregion
41874D11Rat95222116522311265223335Ratregion
60568D7Got152172116786709467867266Ratregion
44847D11Got73300117885134078851641Ratregion
44849D11Got78198117873113978731336Ratregion
44851D11Wox7266117406199274062268Ratregion
44852D11Got70247117684170876841952Ratregion
44855D11Got66169117444867174448840Ratregion
44857D11Got62162117211205372112215Ratregion
44858D11Got63206117171787371718079Ratregion
44862D11Got53112116641439566414504Ratregion
44863D11Got56133116610229366102426Ratregion
44864D11Got54166116710827267108435Ratregion
44866D11Got55178116512395365124130Ratregion
44867D11Got43145116495528664955431Ratregion
44868D11Got57296116516324965163545Ratregion
44869D11Got44175116495097164951146Ratregion
44870D11Got47221115761545257615671Ratregion
44871D11Got45196116180204261802238Ratregion
44875D11Got51202115882873158828933Ratregion
44876D11Got58203116786711267867315Ratregion
44877D11Got40146114447652844476674Ratregion
44878D16Got11229113567361235673841Ratregion
44880D11Got38250114297814042978390Ratregion
44881D11Got37259114327745143277710Ratregion
44883D11Got39182114393681043936992Ratregion
44884D11Got41213114315041143150624Ratregion
44886D11Got36143113700823437008375Ratregion
44887D11Got84103114063791640638019Ratregion
44888D11Got34267113686859336868860Ratregion
44889D11Wox10107114193600541936116Ratregion
44890D11Got35190114219155842191749Ratregion
44894D11Got25177113353706033537232Ratregion
44895D11Got19194113354659333546787Ratregion
44896D11Got27271113323184633232121Ratregion
44897D11Got28142113273386832734009Ratregion
44898D11Got29207113149925331499460Ratregion
629586D11Mit11221116750729367507514Ratregion
59993D11Got31167113918618739186354Ratregion
59995D11Got48204115824260158242807Ratregion
59996D11Got49241115761544457615683Ratregion
59998D11Got61149117208094572081090Ratregion
59999D11Got65117117471376974713884Ratregion
60000D11Got67118117449688874497006Ratregion
60001D11Got6988117591732075917412Ratregion
60002D11Got71170117684175576841925Ratregion
60003D11Got74359117838573978386094Ratregion
60004D11Got75210117826250378262713Ratregion
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60010D11Got85164115912246159122625Ratregion
62430D11Uia2191116125586061256051Ratregion
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66624D11Mco1240117237393272374168Ratregion
66625D11Mco2160116606368866063860Ratregion
66632D11Mco6350113422774434228097Ratregion
67235D11Arb5188116297949762979687Ratregion
67236D11Arb6239115543699855437237Ratregion
67238D11Arb9217113436157934361798Ratregion
67350D11Arb13183117245397172454154Ratregion
1630182D11Got114223113675121036751433Ratregion
1630206D11Wox15117483978074839933Ratregion
1630263D11Got116118116783920567839323Ratregion
1631039D11Got130184115051771750517895Ratregion
1631275D11Got105110115028508750285197Ratregion
1631569D11Got119125115046488450465006Ratregion
1632184D11Got120159115551217055512329Ratregion
1627748D11Got129245114942585249426096Ratregion
1627941D11Got112206117246224372462449Ratregion
1628752D11Got132147115264224452642391Ratregion
1628752D11Got132147115264224452643075Ratregion
1628872D11Got115253115070813050708378Ratregion
1629061D11Got133180114792332247923502Ratregion
1630052D11Got107260115051547050515730Ratregion
1638489D11Got141158113645733936457497Ratregion
1639262D11Got102248113535262635352874Ratregion
1640941D11Got111269115938586859386137Ratregion
1641412D11Got109206115743386757434075Ratregion
1633415D11Got134151115276286052763011Ratregion
1633479D11Got110148115691934756919497Ratregion
1640146D11Got137214116239737662397590Ratregion
1640349D11Got139133115171077951710912Ratregion
1635274D11Wox11178113400628134006459Ratregion
1635415D11Got124269115073824350738512Ratregion
1635820D11Got108189115341800053418189Ratregion
1635922D11Got122283114851515648515439Ratregion
1636164D11Wox8202116297947462979678Ratregion
1636266D11Got1310113506183735062019Ratregion
1636377D11Uwm2142114297811942978261Ratregion
1636528D2Got332131117651632676516356Ratregion
1637099D11Got121169115545177855451947Ratregion
1637815D11Got11892116771755867717650Ratregion
1637846D11Got106300115051547850515778Ratregion
1637931D11Got104136115015831850158454Ratregion
1638418D11Got139121115995643859956554Ratregion
1634138D11Cebr1265117842454578424810Ratregion
1634179D11Got127145115214456952144716Ratregion
1634797D11Got126208115358589653586104Ratregion
2325914D6Hmgc2188117623806776238098Ratregion
7193090D11Wox10107114193600541936116Ratregion
5035733STS-L28957186116831723268317418Ratregion
7205886px-34a80116181469261814866Ratregion
7206438Cldn11090117443540074436490Ratregion
7206474B3galt5516113562622635626742Ratregion
5035773PMC166143P1100116282038562820485Ratregion
5035785PMC17794P1165115842450558424670Ratregion
5035859PMC24644P1786117695715076957936Ratregion
5038718RH127062246113301661133016857Ratregion
5038720AU022856249113503805935038308Ratregion
5036187RH125842245114337877843379023Ratregion
5038974RH127440211116578315965783370Ratregion
7206408mMECIR5250114069119340692710Ratregion
5036384UniSTS:143667264113414894934149213Ratregion
5036390Kpna1121116472081764720938Ratregion
5036547Zfp148205116728346867283673Ratregion
5039000RH127455193117752706577527258Ratregion
5039098RH127511197116404292564043122Ratregion
5036591AU048531123117471376474713885Ratregion
5036929AU049657112115151982551519934Ratregion
5037053WI-11592117113301795533018072Ratregion
5033895RH140526111116877002268770133Ratregion
5033949RH140729212117737396077374172Ratregion
5025946RH130304214116832975168329965Ratregion
5026100RH130910201117805462178054822Ratregion
5028579AA959454242117578732775787569Ratregion
5028581AI480666219116727764767277866Ratregion
5028583AI452146295113319432533194620Ratregion
5028585AI449533247113722542437225671Ratregion
5028633RH125651246114188315441883400Ratregion
5028711RH71216178115687974856879926Ratregion
5031486AU048165253117781902377819275Ratregion
5034039RH141128180116225324662253426Ratregion
5034077RH141276150116700779967007949Ratregion
5034079RH141283219116222614562226364Ratregion
5031544AU047979278117685607876856356Ratregion
5034313G67817242113329332333293565Ratregion
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5034335G67859420113713497037135390Ratregion
5026356RH131891180113679555736795737Ratregion
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5028951RH142945247114427696844277203Ratregion
5029051RH143332257113502796835028225Ratregion
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5034468BE118764180116321344863213628Ratregion
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5026480RH132374187115221922252219382Ratregion
5026568RH132712205116215510562155310Ratregion
5029103RH143536249116222534162225590Ratregion
5031978AU046493241115639910356399338Ratregion
5034544BE119309209114852404348524252Ratregion
5029259RH144116223114069734740697570Ratregion
5034752AI599309166117110858671108752Ratregion
5026828RH133688185116365952163659706Ratregion
5026856RH133792204116881915368819357Ratregion
5029417UniSTS:2340080113731218637312389Ratregion
5029439Muc40116800863368009770Ratregion
5032235AB012693102115090996150910063Ratregion
50350122610510B01Rik256113308464333084899Ratregion
5035014B3galt5244113562622635626470Ratregion
5035020Dscam242113592762635927868Ratregion
5035024Kcne2248113152852331528771Ratregion
5035028UniSTS:259143129113131541731315546Ratregion
5035030Ttc3259113376177033762029Ratregion
5035144BM389975196116579814965798345Ratregion
5029671BF386882151115442016754420318Ratregion
5032427AI505817150115581721055817360Ratregion
5032477RH126681213117879516678795379Ratregion
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5025220RH127473211115661435456614565Ratregion
5025280RH127712188116796397467964162Ratregion
502782502.MMHAP26FLA2.seq213114348046143480674Ratregion
5027841RH118364153115146341651463569Ratregion
5033293RH138298143115885576658855909Ratregion
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5025470RH128444196115567416155674357Ratregion
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5028077U4146586117687636376876449Ratregion
5028179D16Mit101157117710697677107133Ratregion
5028183D16Mit184127114505877945058906Ratregion
5028185D16Mit211112116514064365140753Ratregion
5028187D16Mit229105116948368369483788Ratregion
5028189D16Mit40240115770290057703140Ratregion
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5033533RH139177213116468015264680677Ratregion
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Position Markers

Flank 1: (D11Rat12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21131,239,134 - 31,239,277 (+)MAPPER
Rnor_6.01132,155,520 - 32,155,664NCBI
Rnor_5.01135,759,925 - 35,760,069UniSTS
RGSC_v3.41131,988,113 - 31,988,401RGD
RGSC_v3.41131,988,234 - 31,988,378UniSTS
RGSC_v3.11132,044,477 - 32,044,621RGD
Celera1130,898,846 - 30,898,990UniSTS
RH 3.4 Map11202.8RGD
RH 3.4 Map11202.8UniSTS
RH 2.0 Map11452.8RGD
SHRSP x BN Map1110.4799RGD
FHH x ACI Map1112.2199RGD
Peak: (D11Rat83)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21162,138,330 - 62,138,486 (+)MAPPER
Rnor_6.01164,700,721 - 64,700,872NCBI
Rnor_5.01167,408,779 - 67,408,930UniSTS
RGSC_v3.41163,915,780 - 63,915,932RGD
RGSC_v3.41163,915,781 - 63,915,932UniSTS
RGSC_v3.11163,973,360 - 63,973,726RGD
Celera1161,641,267 - 61,641,418UniSTS
FHH x ACI Map1144.0199RGD
FHH x ACI Map1144.0199UniSTS
Cytogenetic Map11q21UniSTS
Flank 2: (D11Rat46)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21178,851,329 - 78,851,519 (+)MAPPER
Rnor_6.01182,442,929 - 82,443,118NCBI
Rnor_5.01185,534,123 - 85,534,312UniSTS
RGSC_v3.41181,091,341 - 81,091,531RGD
RGSC_v3.41181,091,342 - 81,091,531UniSTS
RGSC_v3.11181,148,931 - 81,149,120RGD
Celera1177,714,115 - 77,714,304UniSTS
RH 3.4 Map11650.2RGD
RH 3.4 Map11650.2UniSTS
RH 2.0 Map1160.2RGD
SHRSP x BN Map1135.7599RGD
FHH x ACI Map1156.1999RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)114545932375190161Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)111945620576331918Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116611332182169223Rat
10450831Scl80Serum cholesterol level QTL 804.70.01blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)117695713183051965Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)113123913478851519Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)114428575982566702Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112767241082846715Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)115445753486241447Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)115980279482566545Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)112952841882566702Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
11528648Bss118Bone structure and strength QTL 1186.6582e-07femur strength trait (VT:0010010)femur ultimate displacement (CMO:0002719)114063876343376331Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)116642214886241447Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)112952841860324829Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)114094618882566702Rat
1354656Bvd3Brain ventricular dilatation QTL 33.640.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116944607082846715Rat
1354593Stl12Serum triglyceride level QTL 123.36blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)116642214886241447Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)112328045668280456Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)112328045668280456Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)115513672982993457Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)115635142486241447Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software package: phenotypic comparison by Student's t-test; group comparison of phenotypic traits by Kruskal-Wallis' test; phenotypic differences by two-sided students' t-test 2311085
qtl_general measurement method: animals were anesthetized by isoflurane at 6-8 weeks of age and subjected to unilateral avulsion of the left L3-L5 ventral roots, they were killed and spinal cord examined; serial cryosections of L4 were cut and B2m levels measured 2311085
qtl_general number of animals used: 151 F2 rats 2311085