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Gene: Zdhhc23 (zinc finger DHHC-type palmitoyltransferase 23) Rattus norvegicus

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Symbol:

Zdhhc23

Name:

zinc finger DHHC-type palmitoyltransferase 23

RGD ID:

1303254

Description:

Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in protein localization to plasma membrane and protein targeting to membrane. Predicted to act upstream of or within protein palmitoylation. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC23 (zinc finger DHHC-type palmitoyltransferase 23); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

DHHC-23; DHHC23; LOC100911213; membrane-associated DHHC23 zinc finger protein; nidd; NNOS-interacting DHHC domain-containing protein with dendritic mRNA; nNOS-intereacting DHHC-containing Dem protein-L; palmitoyltransferase ZDHHC23; probable palmitoyltransferase ZDHHC23; uncharacterized LOC100911213; zinc finger DHHC domain-containing protein 23; zinc finger, DHHC domain containing 23; zinc finger, DHHC-type containing 23

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZDHHC23 (zinc finger DHHC-type palmitoyltransferase 23)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Zdhhc23 (zinc finger, DHHC domain containing 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Zdhhc23 (zDHHC palmitoyltransferase 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZDHHC23 (zDHHC palmitoyltransferase 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZDHHC23 (zinc finger DHHC-type palmitoyltransferase 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Zdhhc23 (zDHHC palmitoyltransferase 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZDHHC23 (zinc finger DHHC-type palmitoyltransferase 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZDHHC23 (zDHHC palmitoyltransferase 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Zdhhc23 (zDHHC palmitoyltransferase 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ZDHHC23 (zinc finger DHHC-type palmitoyltransferase 23)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zdhhc23 (zinc finger, DHHC domain containing 23)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zdhhc23a (zinc finger, DHHC-type containing 23a)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	zdhhc23b (zinc finger, DHHC-type containing 23b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zdhhc23b (zinc finger, DHHC-type containing 23b)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PFA4	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Drosophila melanogaster (fruit fly):	GABPI	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	GABPI	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	zdhhc23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	70,224,581 - 70,240,971 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	70,225,045 - 70,240,102 (+)	Ensembl				GRCr8
mRatBN7.2	11	56,718,702 - 56,735,063 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	56,718,826 - 56,734,194 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	65,532,953 - 65,543,533 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	58,195,202 - 58,205,782 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	57,243,748 - 57,254,331 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	61,661,119 - 61,677,547 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	61,661,310 - 61,676,684 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	60,791,638 - 60,807,948 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	58,286,189 - 58,296,769 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	56,272,859 - 56,283,439 (+)	NCBI		Celera
RGSC_v3.1	11	58,342,817 - 58,358,183 (+)	NCBI
Cytogenetic Map	11	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chemical and Drug Induced Liver Injury (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole (EXP)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (EXP)

all-trans-retinoic acid (ISO)

amiodarone (EXP)

amitrole (EXP)

aristolochic acid A (ISO)

benzbromarone (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chlorpyrifos (EXP)

cisplatin (ISO)

clofibrate (EXP)

corn oil (EXP)

Cuprizon (EXP)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

dibutyl phthalate (ISO)

diclofenac (ISO)

diethyl phthalate (ISO)

diisobutyl phthalate (ISO)

diisononyl phthalate (ISO)

dorsomorphin (ISO)

fulvestrant (ISO)

hydrogen peroxide (ISO)

ketamine (EXP)

L-ethionine (EXP)

leflunomide (ISO)

methimazole (EXP)

omeprazole (EXP)

permethrin (ISO)

phenobarbital (EXP)

pirinixic acid (EXP)

quercetin (ISO)

resveratrol (EXP)

rotenone (EXP)

SB 431542 (ISO)

sodium dodecyl sulfate (ISO)

streptozocin (EXP)

sulfadimethoxine (EXP)

temozolomide (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

triclosan (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein localization to plasma membrane (IBA,IEA,ISO)

protein palmitoylation (ISO)

protein targeting to membrane (IBA)

Cellular Component

endoplasmic reticulum (IBA)

Golgi apparatus (IBA,IEA)

Golgi membrane (IEA)

membrane (IEA)

Molecular Function

acyltransferase activity (IEA)

palmitoyltransferase activity (IEA)

protein binding (ISO)

protein-cysteine S-palmitoyltransferase activity (IBA,IEA)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	NIDD, a novel DHHC-containing protein, targets neuronal nitric-oxide synthase (nNOS) to the synaptic membrane through a PDZ-dependent interaction and regulates nNOS activity.	Saitoh F, etal., J Biol Chem 2004 Jul 9;279(28):29461-8. Epub 2004 Apr 22.

Additional References at PubMed

PMID:17873365	PMID:17899403	PMID:22399288

Genomics

Comparative Map Data

Zdhhc23
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	70,224,581 - 70,240,971 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	70,225,045 - 70,240,102 (+)	Ensembl				GRCr8
mRatBN7.2	11	56,718,702 - 56,735,063 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	56,718,826 - 56,734,194 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	65,532,953 - 65,543,533 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	58,195,202 - 58,205,782 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	57,243,748 - 57,254,331 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	61,661,119 - 61,677,547 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	61,661,310 - 61,676,684 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	60,791,638 - 60,807,948 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	58,286,189 - 58,296,769 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	56,272,859 - 56,283,439 (+)	NCBI		Celera
RGSC_v3.1	11	58,342,817 - 58,358,183 (+)	NCBI
Cytogenetic Map	11	q21	NCBI

ZDHHC23
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	113,947,901 - 113,979,508 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	113,947,901 - 113,965,401 (+)	Ensembl			hg38	GRCh38
GRCh37	3	113,666,748 - 113,682,220 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	115,149,438 - 115,164,519 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	3	115,149,437 - 115,164,515	NCBI
Celera	3	112,075,199 - 112,090,278 (+)	NCBI		Celera
Cytogenetic Map	3	q13.31	NCBI
HuRef	3	111,040,938 - 111,055,875 (+)	NCBI		HuRef
CHM1_1	3	113,630,124 - 113,645,199 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	116,669,165 - 116,719,588 (+)	NCBI		T2T-CHM13v2.0

Zdhhc23
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	43,785,396 - 43,800,295 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	43,785,396 - 43,800,154 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	43,965,033 - 43,979,820 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	43,965,033 - 43,979,791 (-)	Ensembl			mm10	GRCm38
MGSCv37	16	43,969,259 - 43,979,163 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	43,888,478 - 43,898,382 (-)	NCBI		MGSCv36	mm8
Celera	16	44,324,294 - 44,334,213 (-)	NCBI		Celera
Cytogenetic Map	16	B4	NCBI
cM Map	16	28.44	NCBI

Zdhhc23
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	14,045,657 - 14,057,202 (+)	Ensembl
ChiLan1.0	NW_004955427	14,045,659 - 14,057,226 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZDHHC23
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	111,940,243 - 111,955,562 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	111,945,021 - 111,960,340 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	111,086,166 - 111,101,631 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	118,007,264 - 118,022,595 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	118,007,270 - 118,022,204 (+)	Ensembl			panPan2	panpan1.1

ZDHHC23
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	18,215,822 - 18,227,626 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	18,215,678 - 18,223,268 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	18,323,605 - 18,335,904 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	18,461,154 - 18,473,451 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	18,461,254 - 18,469,090 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	18,264,528 - 18,276,815 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	18,316,321 - 18,328,618 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	18,861,187 - 18,873,505 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Zdhhc23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	136,071,082 - 136,086,926 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936536	1,434,748 - 1,450,854 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936536	1,434,774 - 1,450,872 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZDHHC23
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	145,970,851 - 145,997,044 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	145,981,955 - 145,997,599 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	155,569,093 - 155,584,573 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZDHHC23
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	66,905,388 - 66,917,104 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	66,901,395 - 66,915,702 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	99,551,890 - 99,567,107 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zdhhc23
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	34,544,250 - 34,560,790 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	34,544,476 - 34,561,284 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Zdhhc23
178 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	564
Count of miRNA genes:	271
Interacting mature miRNAs:	353
Transcripts:	ENSRNOT00000034122
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	22524746	82951192	Rat
1598841	Memor7	Memory QTL 7			exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	11	33306008	78306008	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	46443168	91443168	Rat
1598811	Bp291	Blood pressure QTL 291	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	33306008	78306008	Rat
1581565	Pur10	Proteinuria QTL 10		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	58272363	96350770	Rat
4889859	Pur28	Proteinuria QTL 28	19.5	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	11	58928336	99753367	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
10755497	Bp388	Blood pressure QTL 388	2.76		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	32943067	89836615	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	31915469	76915469	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	36428416	81428416	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	34618760	79618760	Rat
1300135	Rf19	Renal function QTL 19	3.38		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	11	54415391	96071021	Rat
2298551	Neuinf10	Neuroinflammation QTL 10	3.7		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	11	58931822	92356038	Rat
2312566	Glom20	Glomerulus QTL 20	3.6	0.001	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	57754837	96071021	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	20193549	96351019	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	36749459	81749459	Rat
724561	Plsm4	Polydactyly-luxate syndrome (PLS) morphotypes QTL 4		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	11	67962184	99753367	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	36749459	81749459	Rat
4889521	Gluco62	Glucose level QTL 62	2.82	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	68599321	96497754	Rat
7411658	Foco27	Food consumption QTL 27	16.2	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	11	69855943	99753367	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
1581572	Uae35	Urinary albumin excretion QTL 35		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	58272363	96350770	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	51071021	96071021	Rat
631510	Spl2	Serum phospholipid level QTL 2	4.1		blood phospholipid amount (VT:0006084)	serum phospholipid level (CMO:0001171)	11	27556685	72556685	Rat

Markers in Region

RH133114

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	56,732,901 - 56,734,056 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	61,675,386 - 61,676,540	NCBI	Rnor6.0
Rnor_5.0	11	60,805,787 - 60,806,941	UniSTS	Rnor5.0
RGSC_v3.4	11	58,299,305 - 58,300,459	UniSTS	RGSC3.4
Celera	11	56,285,975 - 56,287,129	UniSTS
RH 3.4 Map	4	568.93	UniSTS
Cytogenetic Map	11	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	65	163	91	90	59	91	59	6	353	189	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_213627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB098078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC114526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY886538	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000079423 ⟹ ENSRNOP00000075515

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	11	61,661,724 - 61,672,469 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079521 ⟹ ENSRNOP00000073720

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	11	61,662,270 - 61,672,850 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093325 ⟹ ENSRNOP00000076233

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	70,225,045 - 70,240,102 (+)	Ensembl
mRatBN7.2 Ensembl	11	56,718,826 - 56,734,194 (+)	Ensembl
Rnor_6.0 Ensembl	11	61,661,310 - 61,676,684 (+)	Ensembl

RefSeq Acc Id:

NM_213627 ⟹ NP_998792

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,225,694 - 70,236,274 (+)	NCBI
mRatBN7.2	11	56,719,786 - 56,730,366 (+)	NCBI
Rnor_6.0	11	61,662,270 - 61,672,850 (+)	NCBI
Rnor_5.0	11	60,791,638 - 60,807,948 (+)	NCBI
RGSC_v3.4	11	58,286,189 - 58,296,769 (+)	RGD
Celera	11	56,272,859 - 56,283,439 (+)	RGD

Sequence:

show sequence

GAGAAGTGAAGATGTGTTTACAGGATGTGAGTTGAGTTCTCTCCACCTTTACCTTCCGAGAGCT
GCTTCTTATGCCTCATGGTGACAGGTACAAATCTTTACGCTAAAAGGCAATATGAAGCCAGTAA
AAAAAAAGAAAACCGAAGAGCCTGAATTGGAGCCCCTGTGTTGCTGTGAGTACATAGATCGAAA
TGGGGAAAAGAACCACGTGGCTGCCTGTTTGTGTGATTGTCAGGACCTCGATGAAGGCTGTGAC
AGATGGCTTACCTGTAAATCGCTTCGGCCGGAGACGTGTGAGAGAATCACGGATACGATTTCTG
ATCGCCTCCGAATTCCTTGGCTCCGAGGAGCCAAAAAAGTCAATATCAGCATCCTCCCCCCACT
CGTGCTCTTGCCGGTTCTGCTCCGCGTGGCTTCCTGGCACTTCCTGCTGGGGGTGGTGGTTCTG
ACCTCCCTGCCCATGCTGGCACTGTGGTACTACTACCTCACTCACAGAAGGAAAGAGCAGACGC
TGTTTTTCTTGAGCCTCGGTCTGTTCTCCCTGGGCTACATGTACTATGTGTTCTTGCAGGAAGT
GGTCCCCCAAGGGCACGTAGGGCCCGCTCAGCTGGCCCTTCTCACCTGCGGGTTATTTCTGATA
CTCGTAGCCTTGTACCGAGCCAAGAAGAATCCAGGCTACCTCAGCAACCCAGCATGCAATGACA
AATCCCCCAGCAACAGCCAAATCGAATGCCCGATCAAAAAAGGGCAGGAGAAGACCAAAGGGTT
CCCCGGCACAGATACCTCGGGGAGCCTTAACAACCGCACACTGAAGGACGATGCTAAGGGCTCC
TCCAGGGTGGGGCTTGACAGCCCCGCCAAATCGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAG
TGCGGCCCGCCCGGGCGTGGCATTGCCGGATATGCGGTATCTGTGTGAGGAGAATGGATCACCA
TTGTGTCTGGATAAACAGCTGCGTCGGAGAATCAAACCATCAAGCGTTTATACTTGCTCTTTCC
ATCTTCTTGCTCACTTCGGTTTACGGAATATCGCTGACCTTGAACACCATCTGTAGGGACAGAA
GCCTCTTCACAGCCCTCTTCTACTGTCCTGGAGTTTACGCTAATTACAGCTCAGCTCTATCCTT
CACCTGCGTGTGGTACTCGGTGATCATCACAGCCGGCATGGCCTACATCTTCCTCATCCAGCTG
ATAAACATCAGCTACAATGTGACGGAGAGGGAAGTGCAGCAGGCCCTTCGGCAGAAGACGGGGC
GCCGGCTCCTCTGTGGGCTCATTGTGGACACGGGCCAGTACAACAGGGGCTTCCTGCGCAACTG
GCTCCAGTTCTCCACCCTAGGCACACGCACAGTCCACACCCCTGCCGAGGACATTGTCTAAGTG
CCTTCCATGCGGCCCTGCGGGACATTCCTCGCTGTCCTTCCTGTTCACGTCAGTATCCATGCAG
GACTCATCTCCACCGCCCACTTCTCGGAAGTACTGCCGAGCTACGCTCAGGTTTGGAGAGGACC
GAAGAAAGGGTAACTTCTTCTGCCTTTATAACTCATGGGAGTTTTACTGAAGCAGCAAGAGTAG
CCATTCCTTTCCTGTCCCCTTGCTGACTCAGGCACCAGAAGCTGCAAAGAGGCTGTGGTCACAC
AAACTGTCCATATGAGGAAGGAAGTTAGTTAGAATGAGGAGTGTTCCTAGTCCTCCGTTCCATT
TCTAATAGCCATGTGACCCCTCGGTCGAGTCACTTTCCCAAGTCTCAGGTTCATCTGTGTGGGG
GCTTCTGCTGCCTGGCTACCTCATGGAGCAGCCATGATGGCCACCTGAGGAGGGCTGTGGAGTT
CAACTCCAGCACTCGGGGGAGTCAGGCATTATTAGAAAATGCCTAGGACTGAAGCAGACTGCTC
ATAGGTCAGAATATTGAAGCCAATACTGTTAAGACAATCAGTTTGTACAGTTAAGGAAATTCTC

hide sequence

RefSeq Acc Id:

XM_008768738 ⟹ XP_008766960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,987 - 70,240,971 (+)	NCBI
mRatBN7.2	11	56,719,085 - 56,735,063 (+)	NCBI
Rnor_6.0	11	61,661,699 - 61,677,547 (+)	NCBI

Sequence:

show sequence

CGCCCGAGCCCTCCGTGCAAGGTCGGAGGCGCAACCGCGCCGAGGGGAGCCGGTCCTCCTCCCG
GTCCCCGCCTCTGTCGGAGGGCAGGCGTTGGCGTTAATGAGAAGTGAAGATGTGTTTACAGGAT
GTGAGTTGAGTTCTCTCCACCTTTACCTTCCGAGAGCTGCTTCTTATGCCTCATGGTGACAGGT
ACAAATCTTTACGCTAAAAGGCAATATGAAGCCAGTAAAAAAAAAGAAAACCGAAGAGCCTGAA
TTGGAGCCCCTGTGTTGCTGTGAGTACATAGATCGAAATGGGGAAAAGAACCACGTGGCTGCCT
GTTTGTGTGATTGTCAGGACCTCGATGAAGGCTGTGACAGATGGCTTACCTGTAAATCGCTTCG
GCCGGAGACGTGTGAGAGAATCACGGATACGATTTCTGATCGCCTCCGAATTCCTTGGCTCCGA
GGAGCCAAAAAAGTCAATATCAGCATCCTCCCCCCACTCGTGCTCTTGCCGGTTCTGCTCCGCG
TGGCTTCCTGGCACTTCCTGCTGGGGGTGGTGGTTCTGACCTCCCTGCCCATGCTGGCACTGTG
GTACTACTACCTCACTCACAGAAGGAAAGAGCAGACGCTGTTTTTCTTGAGCCTCGGTCTGTTC
TCCCTGGGCTACATGTACTATGTGTTCTTGCAGGAAGTGGTCCCCCAAGGGCACGTAGGGCCCG
CTCAGCTGGCCCTTCTCACCTGCGGGTTATTTCTGATACTCGTAGCCTTGTACCGAGCCAAGAA
GAATCCAGGCTACCTCAGCAACCCAGCATGCAATGACAAATCCCCCAGCAACAGCCAAATCGAA
TGCCCGATCAAAAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCACAGATACCTCGGGGAGCC
TTAACAACCGCACACTGAAGGACGATGCTAAGGGCTCCTCCAGGGTGGGGCTTGACAGCCCCGC
CAAATCGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTGCGGCCCGCCCGGGCGTGGCATTGC
CGGATATGCGGTATCTGTGTGAGGAGAATGGATCACCATTGTGTCTGGCTTGCTTGTGTATCGT
GTGAGCTACAGGAGACATTCTCAAACAAATGTATTTGTCCCCCTCCCCCTGCTGTTTTGAGGAT
AAACAGCTGCGTCGGAGAATCAAACCATCAAGCGTTTATACTTGCTCTTTCCATCTTCTTGCTC
ACTTCGGTTTACGGAATATCGCTGACCTTGAACACCATCTGTAGGGACAGAAGCCTCTTCACAG
CCCTCTTCTACTGTCCTGGAGTTTACGCTAATTACAGCTCAGCTCTATCCTTCACCTGCGTGTG
GTACTCGGTGATCATCACAGCCGGCATGGCCTACATCTTCCTCATCCAGCTGATAAACATCAGC
TACAATGTGACGGAGAGGGAAGTGCAGCAGGCCCTTCGGCAGAAGACGGGGCGCCGGCTCCTCT
GTGGGCTCATTGTGGACACGGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTC
CACCCTAGGCACACGCACAGTCCACACCCCTGCCGAGGACATTGTCTAAGTGCCTTCCATGCGG
CCCTGCGGGACATTCCTCGCTGTCCTTCCTGTTCACGTCAGTATCCATGCAGGACTCATCTCCA
CCGCCCACTTCTCGGAAGTACTGCCGAGCTACGCTCAGGTTTGGAGAGGACCGAAGAAAGGGTA
ACTTCTTCTGCCTTTATAACTCATGGGAGTTTTACTGAAGCAGCAAGAGTAGCCATTCCTTTCC
TGTCCCCTTGCTGACTCAGGCACCAGAAGCTGCAAAGAGGCTGTGGTCACACAAACTGTCCATA
TGAGGAAGGAAGTTAGTTAGAATGAGGAGTGTTCCTAGTCCTCCGTTCCATTTCTAATAGCCAT
GTGACCCCTCGGTCGAGTCACTTTCCCAAGTCTCAGGTTCATCTGTGTGGGGGCTTCTGCTGCC
TGGCTACCTCATGGAGCAGCCATGATGGCCACCTGAGGAGGGCTGTGGAGTTCAACTCCAGCAC
TCGGGGGAGTCAGGCATTATTAGAAAATGCCTAGGACTGAAGCAGACTGCTCATAGGTCAGAAT
ATTGAAGCCAATACTGTTAAGACAATCAGTTTGTACAGTTAAGGAAATTCTCCATGTTAGACCT
GTGATTGCAGGTTAGTAACAAACAAGAGGGTTGATACTAGTAATCTCGTCTTGAGAAGGACAGC
TGATGAAAATATCTGTGCAGTGTGTAGTGGGCAGAAATTTAGGTGACGAATATATTTTTTAATG
TATCATTTTATATTTATTATACTTAACTAATTTTTCCCCCTTCCACGTTTTCCCTGGGTGAGGC
GCTGGCACACGGGTGGTTGTGGTTGGAAGGAGAGGAGACTGTCCTCCGAGAACATTTCCCTCTT
GTGGCTGTGGAGGCTGATTAATATCAAGGGCTTGATTTTTTATTATTATCCATGTATTTTCAGT
GCTGTAATGTTTAGAGCACTAAATGGGAACATCAGCCGGGATGAACTCTCTCCAGGGTGACTGA
CACCTTTCCATATCCACATGGCTGTCCTCCCTACGAACATGCATCTCACAGGAGAGAACAGCGT
ACATGCGCTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCCCCCTACTAAAGTGTTCC
TTTGTGTCTCAGAACTGAAACTTGGGGAAGACTACACAGTGGGCCCTCTTTCTGCCACAGAAAC
GGGAGATCCATCGGAGAACTCCATCTTGAAGTGTCTGTTTTTACACATGTACTGTTTCTGGGAT
CCCAAAGATCAAAGATAATTTGTGAGACCTTAAGTTTGCCTTGGCCTTGTTGCTTCAGAGGGGA
AACAGAGCTTTGTGGGTGTTGCTGCTGTTGTTTGCTGTTCTCTGCCTGCTTGTATGCACGGAGG
AAATGCTCCTGCTTCTTGGGCTAGTCTGCTCTTGCGCAGAGCGCCATCCTGAGACTTGCCATTG
ACCGGGGCTCTCCTGAAGACAGGTGCCACATTTTCATCCAGGTTTGTCATTGCTCTCCGCAGAG
ATCTATTGTTCAATAAATAATAGACTCCGTATCCCACTGGGTAAGCCAGAGAGGGAGCCTGGGG
ATGCTCGCTGGCTGCAGTTTCTACGGTGACGCCTGGCCCAGAGTCAAACATTCAGAATGAAAGT
TGGCTTGGCTACAACTAATTTCTGTCTTTGTGGGTTTTAGGTAAGAGAGATGGTAGTAACGTCA
GAGACAGCGTATGTGGGCAGAAATTGGTAGTTTTCATGTCTCTCGAATGCCAGGTATGTAGCCA
ACTCTGAGCAGCTAGCTGCTGTGAGAATTTGGAGAAGTCGTTTAGTCATACATGTGCCTGCTGC
GTCTTCATCAGCAGTGCGCTTGGGATGTGAGCACCACCCCGAGACCCAGCAGGAGGATTAGCAG
TGAGCACCCTCTTCCCCAGAGCTCGCCGCTCAAGGTTCACATGAGTGAGGCCCCTCACGTGCAT
GGGGACTCCTTGTTGGCTCTGGCTCACTGGAATTAAGAAGCCAAAATTTCTTTTCTTTTTAGAT
TTTGTATGTGTGTGTGTGTGTGTGTGTGTGTATGCGCGCGCGTGTGCGTGTGCGTGTACAGAGG
AGGCCAGAAGAGCTCCCCCTGGAGCTGGAGTCACAGGCAGCCAATAGCCAGCTGACATGGGCTC
TGAGAACGGAACTTGGGTCCTCTGGAAGAGCAGCACGTGCTCCTAACTGCTGAGCCATCTCTGC
AGCCTCCAGAGGTGAAGTTCCTGGAGAACTTTGGTGGTTTACAGAATGAAGCTCAAACCTGGAT
GCAGATTCTTGCTTTGTGGATCTTTCAGTTCTCCTAACCCCCTCCCCGCAATGTAACGCACTAG
GAATGGAGAACAGGGTACATGCGCTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCTT
CCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCTTCCCAGCACTGAGCAGAACACTGCTTT
CTAGCTCTTCCCTGTACTAAAGTGTTCTTTTGTGTCTCAACTGAAACTTGGGGAAGACTACACA
GTTTCTGCCACAGAAATGGAAGATCCATCGGAGAACTCCATCTTGAAGTGTCTGTTTTTACACA
TGTACTGTTTCTGGGATCCCAAAGATCAAAGATAATTTGTGAGACATAAAATTTGCCTTGACCT
TGTTGCTTTCTAGAGGGGAATTGGGAAATATGCACTCAGGCTTTTACAATTCATTTCCAAGAGA
CAGTAAATCAGGGGCTATCTACAATCAGACCTTTGTGCTTTATGATCTTGTTTGTGGGATTTTG
GTGTTCTCCAGACAGTAGAAGATGTAATTGGAGTCTTTAAAAAGGCAAGGCCTTTGTGAGTGGG
CTGTCCAAACCTCCATGGGTAAGATGAGCCCAGCAGTCCCTTGGCCATGGGAGTGAGTGCTCCC
CACAAATGTGACACCAGGTTAGCAGGTCCTCTTGTCCTCCATCTGAGCTACATGAAGAACCCAC
CCTGTTCTGACCCCTACATTACTTCCATACCACTGTGTGTTCCCAGGAAAGAGGACCGAGGCTG
CTTTTTAAAAACTCAAGGGAAAACACTAAGGATCAAGACTGGAATGAGGAATCCTTCCTATTAG
AAGTGTGTCTTAGGAGCTTGCAAAGTACTGTGTAGGTCACCCTCACTGCCTCCTTGGCAGGCCA
CTCTGACGCCGCTAAAACAAAGCCTTAAATGTGTTTTGGGGACAGTGCTGTCTGATCCCTCAGC
CACATAGTTGCTAGGGTATTTGTAAATCTCTGCTCTCCAAGTGGCATTTCCCTCTGATGAATGA
TTGACTGTTGTCCACTGTACAGCCTGCCTAGAAGGAAAACTGCTGTAAACTTTCTCTTACACAA
TAGTCCTTGGGACTCTAGAATTTTTAGCAAGAGAAAACTTTGTATTCTAGAACTTTCCACTGCC
AGAAAACACAATGCCAGTAAGAGTCTATGTAATACTGATATCTGCCTAACAGACTTCCTTTTTT
TGGGTAGGACATCAGCTTTTTATTATTCAGCTCAACCAACAGAAGTAAAAACCTGTAGAAGCAC
AGCTTTAGCCATGAAGTTTAACACAAGCAATGCGCCATGCGCTCGCTCATCTCTCTAAACCAGC
CGAGTAGGTTTCTGTGACGTAACTTCCTGTTAGCCACACTTTGGCACCCTGCCTTCCAAAAAGA
GCCTTTTCCGGCAAGCAGTGGGTTCGAATTGTGCTGGAGGCCTGCCGGGAGCCTGGTCTGCTCA
GAAGACTGGCAAGCGTGCAGGGCCTGTGAGGTGAGCGTGAAAGCCACATGAACTAAACTGAGAC
TCATGTCACAGCCGTACAGACAGCCGTACGGACAGCCATGTGGACCTGAGCTGGCTCTGAGCAT
TTCACTGTGGGAACGGAAGGCTGAACGGTTAGCACAGCATGCGGGGTGGCTCTCTCTACCTTGG
GCTTGAGATTCATAAGTACCGGAGAGATGTCCTGGTGTCACTTTTTACCTTAAAAGATCCATAT
GTAAAAGGCAAAGCTTTTAACCCAGAGCTAGCCTGCTCTACTGATACAAATAAAAGGTTTTTAG
GCAGAGCCGTGGACAAGATCCCGTCAGAGCAGCAGGCACATACATGCTGCCAGAGTCGGGGTGA
CTTGATGATTTGTTGTGTCTTCGGGGCCTTTTCATTTGATCTGATTTCTGTGTTTGACGGTAGA
TTGAGTGAATCCCAGGAATGGTTTTAATATTAAATCCAATATTTAATATGGAGCCACGCTGGAG
GCTGAGGGCTGGACTCTGCACTCTTCGTGTCCCTCTATCGCCAACTTAGCACCTCAGACTCAGA
TACAAGGCCTTTAAAATGGAAATTTTACCAACTGCTGCTGTTTGTGCAAAATAATATCCTGTGA
TCACATTGTTTAAATGGAAAATAAAGTGCTTTCTTTTATGAAAACAGTCTGATTGTTGGTGTGC
CCTGGAAGTGTTTTGTCTTAAAACACTCTGTGCTCTGAGCTGTGGGGCCTCCTGACTACCTTGT
TGTTGTCCCCATCCAGTGGTCTTTGCAGACCCTAAACTTGGTCTCCCTCTTTTCTTCCTGGCTT
TGTAGGTGAGGTACTGTTTATTCAGTGCTAGTTAGTGGCAGTGTTTCAGACCACGTCTTCACTA
TGGCCTATCAAGAGTCTGGTGGTCTCAAAGGTCTGTAGGCTGGCACTGTCCAGGGGGCTCAGTC
AATATGTGTCTCTAGGAAGCAGTTTCTGGTTGATGTTTGGGTGAAGCAAAGATACAGTTTATGA
CAGAAAGCATGATTTTTATGTGACTTATTTAGGACATGATAAAGAATTCAGCCTTATCTCTAGG
GTTGGCATTAAATTAATATTTGTGTGTGGTTTTGAATTTTTTAGTGTTAATGGCCAGCATTTAG
TAAGTGTGCCATAATTAAGTATAAACAGTGGTTTAGATGGAATAAGATTAAATATGATTTAGTT
TCATTTTTCTTGTGGTCATTTGTCTTTGAAACACGTGTCTCTTGACGTGTCACATGATATTAAA
GAAAAAGGTGTGTGGGCTGCAGCTTAGCTCGGCTCTGGCGTTTTGTGGTCTCAGCCTGTCACTA
CATATCTTTCATGAGAAAAATGATCAGAGCCACTTTGCATGGCATGCAGCTGGGATAGCTTAAG
AACTGTGCTGGGTCAAGCAAGTTTACGCAACAGTTTCATTTTACCAATTCGGATGCTCTGGGCT
ATGAGAAGCTTTCTCGTTCCACTATGTGCATTTGTAGACTATTTGAATTGGTCTCAATAAAGAC
ATGTTTTACCTGA

hide sequence

RefSeq Acc Id:

XM_008768739 ⟹ XP_008766961

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,992 - 70,240,971 (+)	NCBI
mRatBN7.2	11	56,719,090 - 56,735,063 (+)	NCBI
Rnor_6.0	11	61,661,699 - 61,677,547 (+)	NCBI

Sequence:

show sequence

CGCCCGAGCCCTCCGTGCAAGGTCGGAGGCGCAACCGCGCCGAGGGGAGCCGGTCCTCCTCCCG
GTCCCCGCCTCTGTCGGAGGGCAGGCGTTGGCGTTAATGAGAAGTGAAGATGTGTTTACAGGAT
GTGAGTTGAGTTCTCTCCACCTTTACCTTCCGAGAGCTGCTTCTTATGCCTCATGGTGACAGGT
ACAAATCTTTACGCTAAAAGGCAATATGAAGCCAGTAAAAAAAAAGAAAACCGAAGAGCCTGAA
TTGGAGCCCCTGTGTTGCTGTGAGTACATAGATCGAAATGGGGAAAAGAACCACGTGGCTGCCT
GTTTGTGTGATTGTCAGGACCTCGATGAAGGCTGTGACAGATGGCTTACCTGTAAATCGCTTCG
GCCGGAGACGTGTGAGAGAATCACGGATACGATTTCTGATCGCCTCCGAATTCCTTGGCTCCGA
GGAGCCAAAAAAGTCAATATCAGCATCCTCCCCCCACTCGTGCTCTTGCCGGTTCTGCTCCGCG
TGGCTTCCTGGCACTTCCTGCTGGGGGTGGTGGTTCTGACCTCCCTGCCCATGCTGGCACTGTG
GTACTACTACCTCACTCACAGAAGGAAAGAGCAGACGCTGTTTTTCTTGAGCCTCGGTCTGTTC
TCCCTGGGCTACATGTACTATGTGTTCTTGCAGGAAGTGGTCCCCCAAGGGCACGTAGGGCCCG
CTCAGCTGGCCCTTCTCACCTGCGGGTTATTTCTGATACTCGTAGCCTTGTACCGAGCCAAGAA
GAATCCAGGCTACCTCAGCAACCCAGCATGCAATGACAAATCCCCCAGCAACAGCCAAATCGAA
TGCCCGATCAAAAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCACAGATACCTCGGGGAGCC
TTAACAACCGCACACTGAAGGACGATGCTAAGGGCTCCTCCAGGGTGGGGCTTGACAGCCCCGC
CAAATCGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTGCGGCCCGCCCGGGCGTGGCATTGC
CGGATATGCGGTATCTGTGTGAGGAGAATGGATCACCATTGTGTCTGGATAAACAGCTGCGTCG
GAGAATCAAACCATCAAGCGTTTATACTTGCTCTTTCCATCTTCTTGCTCACTTCGGTTTACGG
AATATCGCTGACCTTGAACACCATCTGTAGGGACAGAAGCCTCTTCACAGCCCTCTTCTACTGT
CCTGGAGTTTACGCTAATTACAGCTCAGCTCTATCCTTCACCTGCGTGTGGTACTCGGTGATCA
TCACAGCCGGCATGGCCTACATCTTCCTCATCCAGCTGATAAACATCAGCTACAATGTGACGGA
GAGGGAAGTGCAGCAGGCCCTTCGGCAGAAGACGGGGCGCCGGCTCCTCTGTGGGCTCATTGTG
GACACGGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTAGGCACAC
GCACAGTCCACACCCCTGCCGAGGACATTGTCTAAGTGCCTTCCATGCGGCCCTGCGGGACATT
CCTCGCTGTCCTTCCTGTTCACGTCAGTATCCATGCAGGACTCATCTCCACCGCCCACTTCTCG
GAAGTACTGCCGAGCTACGCTCAGGTTTGGAGAGGACCGAAGAAAGGGTAACTTCTTCTGCCTT
TATAACTCATGGGAGTTTTACTGAAGCAGCAAGAGTAGCCATTCCTTTCCTGTCCCCTTGCTGA
CTCAGGCACCAGAAGCTGCAAAGAGGCTGTGGTCACACAAACTGTCCATATGAGGAAGGAAGTT
AGTTAGAATGAGGAGTGTTCCTAGTCCTCCGTTCCATTTCTAATAGCCATGTGACCCCTCGGTC
GAGTCACTTTCCCAAGTCTCAGGTTCATCTGTGTGGGGGCTTCTGCTGCCTGGCTACCTCATGG
AGCAGCCATGATGGCCACCTGAGGAGGGCTGTGGAGTTCAACTCCAGCACTCGGGGGAGTCAGG
CATTATTAGAAAATGCCTAGGACTGAAGCAGACTGCTCATAGGTCAGAATATTGAAGCCAATAC
TGTTAAGACAATCAGTTTGTACAGTTAAGGAAATTCTCCATGTTAGACCTGTGATTGCAGGTTA
GTAACAAACAAGAGGGTTGATACTAGTAATCTCGTCTTGAGAAGGACAGCTGATGAAAATATCT
GTGCAGTGTGTAGTGGGCAGAAATTTAGGTGACGAATATATTTTTTAATGTATCATTTTATATT
TATTATACTTAACTAATTTTTCCCCCTTCCACGTTTTCCCTGGGTGAGGCGCTGGCACACGGGT
GGTTGTGGTTGGAAGGAGAGGAGACTGTCCTCCGAGAACATTTCCCTCTTGTGGCTGTGGAGGC
TGATTAATATCAAGGGCTTGATTTTTTATTATTATCCATGTATTTTCAGTGCTGTAATGTTTAG
AGCACTAAATGGGAACATCAGCCGGGATGAACTCTCTCCAGGGTGACTGACACCTTTCCATATC
CACATGGCTGTCCTCCCTACGAACATGCATCTCACAGGAGAGAACAGCGTACATGCGCTTCCCA
GCACTGAGCAGAACACTGCTTTCTAGCTCTTCCCCCTACTAAAGTGTTCCTTTGTGTCTCAGAA
CTGAAACTTGGGGAAGACTACACAGTGGGCCCTCTTTCTGCCACAGAAACGGGAGATCCATCGG
AGAACTCCATCTTGAAGTGTCTGTTTTTACACATGTACTGTTTCTGGGATCCCAAAGATCAAAG
ATAATTTGTGAGACCTTAAGTTTGCCTTGGCCTTGTTGCTTCAGAGGGGAAACAGAGCTTTGTG
GGTGTTGCTGCTGTTGTTTGCTGTTCTCTGCCTGCTTGTATGCACGGAGGAAATGCTCCTGCTT
CTTGGGCTAGTCTGCTCTTGCGCAGAGCGCCATCCTGAGACTTGCCATTGACCGGGGCTCTCCT
GAAGACAGGTGCCACATTTTCATCCAGGTTTGTCATTGCTCTCCGCAGAGATCTATTGTTCAAT
AAATAATAGACTCCGTATCCCACTGGGTAAGCCAGAGAGGGAGCCTGGGGATGCTCGCTGGCTG
CAGTTTCTACGGTGACGCCTGGCCCAGAGTCAAACATTCAGAATGAAAGTTGGCTTGGCTACAA
CTAATTTCTGTCTTTGTGGGTTTTAGGTAAGAGAGATGGTAGTAACGTCAGAGACAGCGTATGT
GGGCAGAAATTGGTAGTTTTCATGTCTCTCGAATGCCAGGTATGTAGCCAACTCTGAGCAGCTA
GCTGCTGTGAGAATTTGGAGAAGTCGTTTAGTCATACATGTGCCTGCTGCGTCTTCATCAGCAG
TGCGCTTGGGATGTGAGCACCACCCCGAGACCCAGCAGGAGGATTAGCAGTGAGCACCCTCTTC
CCCAGAGCTCGCCGCTCAAGGTTCACATGAGTGAGGCCCCTCACGTGCATGGGGACTCCTTGTT
GGCTCTGGCTCACTGGAATTAAGAAGCCAAAATTTCTTTTCTTTTTAGATTTTGTATGTGTGTG
TGTGTGTGTGTGTGTGTATGCGCGCGCGTGTGCGTGTGCGTGTACAGAGGAGGCCAGAAGAGCT
CCCCCTGGAGCTGGAGTCACAGGCAGCCAATAGCCAGCTGACATGGGCTCTGAGAACGGAACTT
GGGTCCTCTGGAAGAGCAGCACGTGCTCCTAACTGCTGAGCCATCTCTGCAGCCTCCAGAGGTG
AAGTTCCTGGAGAACTTTGGTGGTTTACAGAATGAAGCTCAAACCTGGATGCAGATTCTTGCTT
TGTGGATCTTTCAGTTCTCCTAACCCCCTCCCCGCAATGTAACGCACTAGGAATGGAGAACAGG
GTACATGCGCTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCTTCCCAGCACTGAGCA
GAACACTGCTTTCTAGCTCTTCTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCCCTG
TACTAAAGTGTTCTTTTGTGTCTCAACTGAAACTTGGGGAAGACTACACAGTTTCTGCCACAGA
AATGGAAGATCCATCGGAGAACTCCATCTTGAAGTGTCTGTTTTTACACATGTACTGTTTCTGG
GATCCCAAAGATCAAAGATAATTTGTGAGACATAAAATTTGCCTTGACCTTGTTGCTTTCTAGA
GGGGAATTGGGAAATATGCACTCAGGCTTTTACAATTCATTTCCAAGAGACAGTAAATCAGGGG
CTATCTACAATCAGACCTTTGTGCTTTATGATCTTGTTTGTGGGATTTTGGTGTTCTCCAGACA
GTAGAAGATGTAATTGGAGTCTTTAAAAAGGCAAGGCCTTTGTGAGTGGGCTGTCCAAACCTCC
ATGGGTAAGATGAGCCCAGCAGTCCCTTGGCCATGGGAGTGAGTGCTCCCCACAAATGTGACAC
CAGGTTAGCAGGTCCTCTTGTCCTCCATCTGAGCTACATGAAGAACCCACCCTGTTCTGACCCC
TACATTACTTCCATACCACTGTGTGTTCCCAGGAAAGAGGACCGAGGCTGCTTTTTAAAAACTC
AAGGGAAAACACTAAGGATCAAGACTGGAATGAGGAATCCTTCCTATTAGAAGTGTGTCTTAGG
AGCTTGCAAAGTACTGTGTAGGTCACCCTCACTGCCTCCTTGGCAGGCCACTCTGACGCCGCTA
AAACAAAGCCTTAAATGTGTTTTGGGGACAGTGCTGTCTGATCCCTCAGCCACATAGTTGCTAG
GGTATTTGTAAATCTCTGCTCTCCAAGTGGCATTTCCCTCTGATGAATGATTGACTGTTGTCCA
CTGTACAGCCTGCCTAGAAGGAAAACTGCTGTAAACTTTCTCTTACACAATAGTCCTTGGGACT
CTAGAATTTTTAGCAAGAGAAAACTTTGTATTCTAGAACTTTCCACTGCCAGAAAACACAATGC
CAGTAAGAGTCTATGTAATACTGATATCTGCCTAACAGACTTCCTTTTTTTGGGTAGGACATCA
GCTTTTTATTATTCAGCTCAACCAACAGAAGTAAAAACCTGTAGAAGCACAGCTTTAGCCATGA
AGTTTAACACAAGCAATGCGCCATGCGCTCGCTCATCTCTCTAAACCAGCCGAGTAGGTTTCTG
TGACGTAACTTCCTGTTAGCCACACTTTGGCACCCTGCCTTCCAAAAAGAGCCTTTTCCGGCAA
GCAGTGGGTTCGAATTGTGCTGGAGGCCTGCCGGGAGCCTGGTCTGCTCAGAAGACTGGCAAGC
GTGCAGGGCCTGTGAGGTGAGCGTGAAAGCCACATGAACTAAACTGAGACTCATGTCACAGCCG
TACAGACAGCCGTACGGACAGCCATGTGGACCTGAGCTGGCTCTGAGCATTTCACTGTGGGAAC
GGAAGGCTGAACGGTTAGCACAGCATGCGGGGTGGCTCTCTCTACCTTGGGCTTGAGATTCATA
AGTACCGGAGAGATGTCCTGGTGTCACTTTTTACCTTAAAAGATCCATATGTAAAAGGCAAAGC
TTTTAACCCAGAGCTAGCCTGCTCTACTGATACAAATAAAAGGTTTTTAGGCAGAGCCGTGGAC
AAGATCCCGTCAGAGCAGCAGGCACATACATGCTGCCAGAGTCGGGGTGACTTGATGATTTGTT
GTGTCTTCGGGGCCTTTTCATTTGATCTGATTTCTGTGTTTGACGGTAGATTGAGTGAATCCCA
GGAATGGTTTTAATATTAAATCCAATATTTAATATGGAGCCACGCTGGAGGCTGAGGGCTGGAC
TCTGCACTCTTCGTGTCCCTCTATCGCCAACTTAGCACCTCAGACTCAGATACAAGGCCTTTAA
AATGGAAATTTTACCAACTGCTGCTGTTTGTGCAAAATAATATCCTGTGATCACATTGTTTAAA
TGGAAAATAAAGTGCTTTCTTTTATGAAAACAGTCTGATTGTTGGTGTGCCCTGGAAGTGTTTT
GTCTTAAAACACTCTGTGCTCTGAGCTGTGGGGCCTCCTGACTACCTTGTTGTTGTCCCCATCC
AGTGGTCTTTGCAGACCCTAAACTTGGTCTCCCTCTTTTCTTCCTGGCTTTGTAGGTGAGGTAC
TGTTTATTCAGTGCTAGTTAGTGGCAGTGTTTCAGACCACGTCTTCACTATGGCCTATCAAGAG
TCTGGTGGTCTCAAAGGTCTGTAGGCTGGCACTGTCCAGGGGGCTCAGTCAATATGTGTCTCTA
GGAAGCAGTTTCTGGTTGATGTTTGGGTGAAGCAAAGATACAGTTTATGACAGAAAGCATGATT
TTTATGTGACTTATTTAGGACATGATAAAGAATTCAGCCTTATCTCTAGGGTTGGCATTAAATT
AATATTTGTGTGTGGTTTTGAATTTTTTAGTGTTAATGGCCAGCATTTAGTAAGTGTGCCATAA
TTAAGTATAAACAGTGGTTTAGATGGAATAAGATTAAATATGATTTAGTTTCATTTTTCTTGTG
GTCATTTGTCTTTGAAACACGTGTCTCTTGACGTGTCACATGATATTAAAGAAAAAGGTGTGTG
GGCTGCAGCTTAGCTCGGCTCTGGCGTTTTGTGGTCTCAGCCTGTCACTACATATCTTTCATGA
GAAAAATGATCAGAGCCACTTTGCATGGCATGCAGCTGGGATAGCTTAAGAACTGTGCTGGGTC
AAGCAAGTTTACGCAACAGTTTCATTTTACCAATTCGGATGCTCTGGGCTATGAGAAGCTTTCT
CGTTCCACTATGTGCATTTGTAGACTATTTGAATTGGTCTCAATAAAGACATGTTTTACCTGA

hide sequence

RefSeq Acc Id:

XM_008768740 ⟹ XP_008766962

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,581 - 70,240,971 (+)	NCBI
mRatBN7.2	11	56,718,702 - 56,735,063 (+)	NCBI
Rnor_6.0	11	61,661,119 - 61,677,547 (+)	NCBI

Sequence:

show sequence

GAAAACCTGTACGTAGGCCCACAGTTCTCACAGATTTGTGCAGCGACGAAACCCTAGAGAGGAC
TCTCTTGGGCAATTTCATTGCAAATGCGCAGACTACTGAATCAAAAGTACCACAGAGGCCTGGC
TGGAAGGCAGCCCCAGCCACCAGGACTCGCGAGCATGCACAAGTTGGATAAGCCGGGCTTGGGA
GCTACAGCGGGCCTCTGGGGAAGGCGTTGGCGTTAATGAGAAGTGAAGATGTGTTTACAGGATG
TGAGTTGAGTTCTCTCCACCTTTACCTTCCGAGAGCTGCTTCTTATGCCTCATGGTGACAGGTA
CAAATCTTTACGCTAAAAGGCAATATGAAGCCAGTAAAAAAAAAGAAAACCGAAGAGCCTGAAT
TGGAGCCCCTGTGTTGCTGTGAGTACATAGATCGAAATGGGGAAAAGAACCACGTGGCTGCCTG
TTTGTGTGATTGTCAGGACCTCGATGAAGGCTGTGACAGATGGCTTACCTGTAAATCGCTTCGG
CCGGAGACGTGTGAGAGAATCACGGATACGATTTCTGATCGCCTCCGAATTCCTTGGCTCCGAG
GAGCCAAAAAAGTCAATATCAGCATCCTCCCCCCACTCGTGCTCTTGCCGGTTCTGCTCCGCGT
GGCTTCCTGGCACTTCCTGCTGGGGGTGGTGGTTCTGACCTCCCTGCCCATGCTGGCACTGTGG
TACTACTACCTCACTCACAGAAGGAAAGAGCAGACGCTGTTTTTCTTGAGCCTCGGTCTGTTCT
CCCTGGGCTACATGTACTATGTGTTCTTGCAGGAAGTGGTCCCCCAAGGGCACGTAGGGCCCGC
TCAGCTGGCCCTTCTCACCTGCGGGTTATTTCTGATACTCGTAGCCTTGTACCGAGCCAAGAAG
AATCCAGGCTACCTCAGCAACCCAGCATGCAATGACAAATCCCCCAGCAACAGCCAAATCGAAT
GCCCGATCAAAAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCACAGATACCTCGGGGAGCCT
TAACAACCGCACACTGAAGGACGATGCTAAGGGCTCCTCCAGGGTGGGGCTTGACAGCCCCGCC
AAATCGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTGCGGCCCGCCCGGGCGTGGCATTGCC
GGATATGCGGTATCTGTGTGAGGAGAATGGATCACCATTGTGTCTGGATAAACAGCTGCGTCGG
AGAATCAAACCATCAAGCGTTTATACTTGCTCTTTCCATCTTCTTGCTCACTTCGGTTTACGGA
ATATCGCTGACCTTGAACACCATCTGTAGGGACAGAAGCCTCTTCACAGCCCTCTTCTACTGTC
CTGGAGTTTACGCTAATTACAGCTCAGCTCTATCCTTCACCTGCGTGTGGTACTCGGTGATCAT
CACAGCCGGCATGGCCTACATCTTCCTCATCCAGCTGATAAACATCAGCTACAATGTGACGGAG
AGGGAAGTGCAGCAGGCCCTTCGGCAGAAGACGGGGCGCCGGCTCCTCTGTGGGCTCATTGTGG
ACACGGGCCAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTAGGCACACG
CACAGTCCACACCCCTGCCGAGGACATTGTCTAAGTGCCTTCCATGCGGCCCTGCGGGACATTC
CTCGCTGTCCTTCCTGTTCACGTCAGTATCCATGCAGGACTCATCTCCACCGCCCACTTCTCGG
AAGTACTGCCGAGCTACGCTCAGGTTTGGAGAGGACCGAAGAAAGGGTAACTTCTTCTGCCTTT
ATAACTCATGGGAGTTTTACTGAAGCAGCAAGAGTAGCCATTCCTTTCCTGTCCCCTTGCTGAC
TCAGGCACCAGAAGCTGCAAAGAGGCTGTGGTCACACAAACTGTCCATATGAGGAAGGAAGTTA
GTTAGAATGAGGAGTGTTCCTAGTCCTCCGTTCCATTTCTAATAGCCATGTGACCCCTCGGTCG
AGTCACTTTCCCAAGTCTCAGGTTCATCTGTGTGGGGGCTTCTGCTGCCTGGCTACCTCATGGA
GCAGCCATGATGGCCACCTGAGGAGGGCTGTGGAGTTCAACTCCAGCACTCGGGGGAGTCAGGC
ATTATTAGAAAATGCCTAGGACTGAAGCAGACTGCTCATAGGTCAGAATATTGAAGCCAATACT
GTTAAGACAATCAGTTTGTACAGTTAAGGAAATTCTCCATGTTAGACCTGTGATTGCAGGTTAG
TAACAAACAAGAGGGTTGATACTAGTAATCTCGTCTTGAGAAGGACAGCTGATGAAAATATCTG
TGCAGTGTGTAGTGGGCAGAAATTTAGGTGACGAATATATTTTTTAATGTATCATTTTATATTT
ATTATACTTAACTAATTTTTCCCCCTTCCACGTTTTCCCTGGGTGAGGCGCTGGCACACGGGTG
GTTGTGGTTGGAAGGAGAGGAGACTGTCCTCCGAGAACATTTCCCTCTTGTGGCTGTGGAGGCT
GATTAATATCAAGGGCTTGATTTTTTATTATTATCCATGTATTTTCAGTGCTGTAATGTTTAGA
GCACTAAATGGGAACATCAGCCGGGATGAACTCTCTCCAGGGTGACTGACACCTTTCCATATCC
ACATGGCTGTCCTCCCTACGAACATGCATCTCACAGGAGAGAACAGCGTACATGCGCTTCCCAG
CACTGAGCAGAACACTGCTTTCTAGCTCTTCCCCCTACTAAAGTGTTCCTTTGTGTCTCAGAAC
TGAAACTTGGGGAAGACTACACAGTGGGCCCTCTTTCTGCCACAGAAACGGGAGATCCATCGGA
GAACTCCATCTTGAAGTGTCTGTTTTTACACATGTACTGTTTCTGGGATCCCAAAGATCAAAGA
TAATTTGTGAGACCTTAAGTTTGCCTTGGCCTTGTTGCTTCAGAGGGGAAACAGAGCTTTGTGG
GTGTTGCTGCTGTTGTTTGCTGTTCTCTGCCTGCTTGTATGCACGGAGGAAATGCTCCTGCTTC
TTGGGCTAGTCTGCTCTTGCGCAGAGCGCCATCCTGAGACTTGCCATTGACCGGGGCTCTCCTG
AAGACAGGTGCCACATTTTCATCCAGGTTTGTCATTGCTCTCCGCAGAGATCTATTGTTCAATA
AATAATAGACTCCGTATCCCACTGGGTAAGCCAGAGAGGGAGCCTGGGGATGCTCGCTGGCTGC
AGTTTCTACGGTGACGCCTGGCCCAGAGTCAAACATTCAGAATGAAAGTTGGCTTGGCTACAAC
TAATTTCTGTCTTTGTGGGTTTTAGGTAAGAGAGATGGTAGTAACGTCAGAGACAGCGTATGTG
GGCAGAAATTGGTAGTTTTCATGTCTCTCGAATGCCAGGTATGTAGCCAACTCTGAGCAGCTAG
CTGCTGTGAGAATTTGGAGAAGTCGTTTAGTCATACATGTGCCTGCTGCGTCTTCATCAGCAGT
GCGCTTGGGATGTGAGCACCACCCCGAGACCCAGCAGGAGGATTAGCAGTGAGCACCCTCTTCC
CCAGAGCTCGCCGCTCAAGGTTCACATGAGTGAGGCCCCTCACGTGCATGGGGACTCCTTGTTG
GCTCTGGCTCACTGGAATTAAGAAGCCAAAATTTCTTTTCTTTTTAGATTTTGTATGTGTGTGT
GTGTGTGTGTGTGTGTATGCGCGCGCGTGTGCGTGTGCGTGTACAGAGGAGGCCAGAAGAGCTC
CCCCTGGAGCTGGAGTCACAGGCAGCCAATAGCCAGCTGACATGGGCTCTGAGAACGGAACTTG
GGTCCTCTGGAAGAGCAGCACGTGCTCCTAACTGCTGAGCCATCTCTGCAGCCTCCAGAGGTGA
AGTTCCTGGAGAACTTTGGTGGTTTACAGAATGAAGCTCAAACCTGGATGCAGATTCTTGCTTT
GTGGATCTTTCAGTTCTCCTAACCCCCTCCCCGCAATGTAACGCACTAGGAATGGAGAACAGGG
TACATGCGCTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCTTCCCAGCACTGAGCAG
AACACTGCTTTCTAGCTCTTCTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCCCTGT
ACTAAAGTGTTCTTTTGTGTCTCAACTGAAACTTGGGGAAGACTACACAGTTTCTGCCACAGAA
ATGGAAGATCCATCGGAGAACTCCATCTTGAAGTGTCTGTTTTTACACATGTACTGTTTCTGGG
ATCCCAAAGATCAAAGATAATTTGTGAGACATAAAATTTGCCTTGACCTTGTTGCTTTCTAGAG
GGGAATTGGGAAATATGCACTCAGGCTTTTACAATTCATTTCCAAGAGACAGTAAATCAGGGGC
TATCTACAATCAGACCTTTGTGCTTTATGATCTTGTTTGTGGGATTTTGGTGTTCTCCAGACAG
TAGAAGATGTAATTGGAGTCTTTAAAAAGGCAAGGCCTTTGTGAGTGGGCTGTCCAAACCTCCA
TGGGTAAGATGAGCCCAGCAGTCCCTTGGCCATGGGAGTGAGTGCTCCCCACAAATGTGACACC
AGGTTAGCAGGTCCTCTTGTCCTCCATCTGAGCTACATGAAGAACCCACCCTGTTCTGACCCCT
ACATTACTTCCATACCACTGTGTGTTCCCAGGAAAGAGGACCGAGGCTGCTTTTTAAAAACTCA
AGGGAAAACACTAAGGATCAAGACTGGAATGAGGAATCCTTCCTATTAGAAGTGTGTCTTAGGA
GCTTGCAAAGTACTGTGTAGGTCACCCTCACTGCCTCCTTGGCAGGCCACTCTGACGCCGCTAA
AACAAAGCCTTAAATGTGTTTTGGGGACAGTGCTGTCTGATCCCTCAGCCACATAGTTGCTAGG
GTATTTGTAAATCTCTGCTCTCCAAGTGGCATTTCCCTCTGATGAATGATTGACTGTTGTCCAC
TGTACAGCCTGCCTAGAAGGAAAACTGCTGTAAACTTTCTCTTACACAATAGTCCTTGGGACTC
TAGAATTTTTAGCAAGAGAAAACTTTGTATTCTAGAACTTTCCACTGCCAGAAAACACAATGCC
AGTAAGAGTCTATGTAATACTGATATCTGCCTAACAGACTTCCTTTTTTTGGGTAGGACATCAG
CTTTTTATTATTCAGCTCAACCAACAGAAGTAAAAACCTGTAGAAGCACAGCTTTAGCCATGAA
GTTTAACACAAGCAATGCGCCATGCGCTCGCTCATCTCTCTAAACCAGCCGAGTAGGTTTCTGT
GACGTAACTTCCTGTTAGCCACACTTTGGCACCCTGCCTTCCAAAAAGAGCCTTTTCCGGCAAG
CAGTGGGTTCGAATTGTGCTGGAGGCCTGCCGGGAGCCTGGTCTGCTCAGAAGACTGGCAAGCG
TGCAGGGCCTGTGAGGTGAGCGTGAAAGCCACATGAACTAAACTGAGACTCATGTCACAGCCGT
ACAGACAGCCGTACGGACAGCCATGTGGACCTGAGCTGGCTCTGAGCATTTCACTGTGGGAACG
GAAGGCTGAACGGTTAGCACAGCATGCGGGGTGGCTCTCTCTACCTTGGGCTTGAGATTCATAA
GTACCGGAGAGATGTCCTGGTGTCACTTTTTACCTTAAAAGATCCATATGTAAAAGGCAAAGCT
TTTAACCCAGAGCTAGCCTGCTCTACTGATACAAATAAAAGGTTTTTAGGCAGAGCCGTGGACA
AGATCCCGTCAGAGCAGCAGGCACATACATGCTGCCAGAGTCGGGGTGACTTGATGATTTGTTG
TGTCTTCGGGGCCTTTTCATTTGATCTGATTTCTGTGTTTGACGGTAGATTGAGTGAATCCCAG
GAATGGTTTTAATATTAAATCCAATATTTAATATGGAGCCACGCTGGAGGCTGAGGGCTGGACT
CTGCACTCTTCGTGTCCCTCTATCGCCAACTTAGCACCTCAGACTCAGATACAAGGCCTTTAAA
ATGGAAATTTTACCAACTGCTGCTGTTTGTGCAAAATAATATCCTGTGATCACATTGTTTAAAT
GGAAAATAAAGTGCTTTCTTTTATGAAAACAGTCTGATTGTTGGTGTGCCCTGGAAGTGTTTTG
TCTTAAAACACTCTGTGCTCTGAGCTGTGGGGCCTCCTGACTACCTTGTTGTTGTCCCCATCCA
GTGGTCTTTGCAGACCCTAAACTTGGTCTCCCTCTTTTCTTCCTGGCTTTGTAGGTGAGGTACT
GTTTATTCAGTGCTAGTTAGTGGCAGTGTTTCAGACCACGTCTTCACTATGGCCTATCAAGAGT
CTGGTGGTCTCAAAGGTCTGTAGGCTGGCACTGTCCAGGGGGCTCAGTCAATATGTGTCTCTAG
GAAGCAGTTTCTGGTTGATGTTTGGGTGAAGCAAAGATACAGTTTATGACAGAAAGCATGATTT
TTATGTGACTTATTTAGGACATGATAAAGAATTCAGCCTTATCTCTAGGGTTGGCATTAAATTA
ATATTTGTGTGTGGTTTTGAATTTTTTAGTGTTAATGGCCAGCATTTAGTAAGTGTGCCATAAT
TAAGTATAAACAGTGGTTTAGATGGAATAAGATTAAATATGATTTAGTTTCATTTTTCTTGTGG
TCATTTGTCTTTGAAACACGTGTCTCTTGACGTGTCACATGATATTAAAGAAAAAGGTGTGTGG
GCTGCAGCTTAGCTCGGCTCTGGCGTTTTGTGGTCTCAGCCTGTCACTACATATCTTTCATGAG
AAAAATGATCAGAGCCACTTTGCATGGCATGCAGCTGGGATAGCTTAAGAACTGTGCTGGGTCA
AGCAAGTTTACGCAACAGTTTCATTTTACCAATTCGGATGCTCTGGGCTATGAGAAGCTTTCTC
GTTCCACTATGTGCATTTGTAGACTATTTGAATTGGTCTCAATAAAGACATGTTTTACCTGA

hide sequence

RefSeq Acc Id:

XM_008768741 ⟹ XP_008766963

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,988 - 70,240,971 (+)	NCBI
mRatBN7.2	11	56,719,086 - 56,735,063 (+)	NCBI
Rnor_6.0	11	61,661,699 - 61,677,547 (+)	NCBI

Sequence:

show sequence

CGCCCGAGCCCTCCGTGCAAGGTCGGAGGCGCAACCGCGCCGAGGGGAGCCGGTCCTCCTCCCG
GTCCCCGCCTCTGTCGGAGGGCAGGCGTTGGCGTTAATGAGAAGTGAAGATGTGTTTACAGGAT
GTGAGTTGAGTTCTCTCCACCTTTACCTTCCGAGAGCTGCTTCTTATGCCTCATGGTGACAGGT
ACAAATCTTTACGCTAAAAGGCAATATGAAGCCAGTAAAAAAAAAGAAAACCGAAGAGCCTGAA
TTGGAGCCCCTGTGTTGCTGTGAGTACATAGATCGAAATGGGGAAAAGAACCACGTGGCTGCCT
GTTTGTGTGATTGTCAGGACCTCGATGAAGGCTGTGACAGATGGCTTACCTGTAAATCGCTTCG
GCCGGAGACGTGTGAGAGAATCACGGATACGATTTCTGATCGCCTCCGAATTCCTTGGCTCCGA
GGAGCCAAAAAAGTCAATATCAGCATCCTCCCCCCACTCGTGCTCTTGCCGGTTCTGCTCCGCG
TGGCTTCCTGGCACTTCCTGCTGGGGGTGGTGGTTCTGACCTCCCTGCCCATGCTGGCACTGTG
GTACTACTACCTCACTCACAGAAGGAAAGAGCAGACGCTGTTTTTCTTGAGCCTCGGTCTGTTC
TCCCTGGGCTACATGTACTATGTGTTCTTGCAGGAAGTGGTCCCCCAAGGGCACGTAGGGCCCG
CTCAGCTGGCCCTTCTCACCTGCGGGTTATTTCTGATACTCGTAGCCTTGTACCGAGCCAAGAA
GAATCCAGGCTACCTCAGCAACCCAGCATGCAATGACAAATCCCCCAGCAACAGCCAAATCGAA
TGCCCGATCAAAAAAGGGCAGGAGAAGACCAAAGGGTTCCCCGGCACAGATACCTCGGGGAGCC
TTAACAACCGCACACTGAAGGACGATGCTAAGGGCTCCTCCAGGGTGGGGCTTGACAGCCCCGC
CAAATCGAAGGAAGACTGGTGTGCCAAGTGCCAGCTAGTGCGGCCCGCCCGGGCGTGGCATTGC
CGGATATGCGGTATCTGTGTGAGGAGAATGGATCACCATTGTGTCTGCTGCGTCGGAGAATCAA
ACCATCAAGCGTTTATACTTGCTCTTTCCATCTTCTTGCTCACTTCGGTTTACGGAATATCGCT
GACCTTGAACACCATCTGTAGGGACAGAAGCCTCTTCACAGCCCTCTTCTACTGTCCTGGAGTT
TACGCTAATTACAGCTCAGCTCTATCCTTCACCTGCGTGTGGTACTCGGTGATCATCACAGCCG
GCATGGCCTACATCTTCCTCATCCAGCTGATAAACATCAGCTACAATGTGACGGAGAGGGAAGT
GCAGCAGGCCCTTCGGCAGAAGACGGGGCGCCGGCTCCTCTGTGGGCTCATTGTGGACACGGGC
CAGTACAACAGGGGCTTCCTGCGCAACTGGCTCCAGTTCTCCACCCTAGGCACACGCACAGTCC
ACACCCCTGCCGAGGACATTGTCTAAGTGCCTTCCATGCGGCCCTGCGGGACATTCCTCGCTGT
CCTTCCTGTTCACGTCAGTATCCATGCAGGACTCATCTCCACCGCCCACTTCTCGGAAGTACTG
CCGAGCTACGCTCAGGTTTGGAGAGGACCGAAGAAAGGGTAACTTCTTCTGCCTTTATAACTCA
TGGGAGTTTTACTGAAGCAGCAAGAGTAGCCATTCCTTTCCTGTCCCCTTGCTGACTCAGGCAC
CAGAAGCTGCAAAGAGGCTGTGGTCACACAAACTGTCCATATGAGGAAGGAAGTTAGTTAGAAT
GAGGAGTGTTCCTAGTCCTCCGTTCCATTTCTAATAGCCATGTGACCCCTCGGTCGAGTCACTT
TCCCAAGTCTCAGGTTCATCTGTGTGGGGGCTTCTGCTGCCTGGCTACCTCATGGAGCAGCCAT
GATGGCCACCTGAGGAGGGCTGTGGAGTTCAACTCCAGCACTCGGGGGAGTCAGGCATTATTAG
AAAATGCCTAGGACTGAAGCAGACTGCTCATAGGTCAGAATATTGAAGCCAATACTGTTAAGAC
AATCAGTTTGTACAGTTAAGGAAATTCTCCATGTTAGACCTGTGATTGCAGGTTAGTAACAAAC
AAGAGGGTTGATACTAGTAATCTCGTCTTGAGAAGGACAGCTGATGAAAATATCTGTGCAGTGT
GTAGTGGGCAGAAATTTAGGTGACGAATATATTTTTTAATGTATCATTTTATATTTATTATACT
TAACTAATTTTTCCCCCTTCCACGTTTTCCCTGGGTGAGGCGCTGGCACACGGGTGGTTGTGGT
TGGAAGGAGAGGAGACTGTCCTCCGAGAACATTTCCCTCTTGTGGCTGTGGAGGCTGATTAATA
TCAAGGGCTTGATTTTTTATTATTATCCATGTATTTTCAGTGCTGTAATGTTTAGAGCACTAAA
TGGGAACATCAGCCGGGATGAACTCTCTCCAGGGTGACTGACACCTTTCCATATCCACATGGCT
GTCCTCCCTACGAACATGCATCTCACAGGAGAGAACAGCGTACATGCGCTTCCCAGCACTGAGC
AGAACACTGCTTTCTAGCTCTTCCCCCTACTAAAGTGTTCCTTTGTGTCTCAGAACTGAAACTT
GGGGAAGACTACACAGTGGGCCCTCTTTCTGCCACAGAAACGGGAGATCCATCGGAGAACTCCA
TCTTGAAGTGTCTGTTTTTACACATGTACTGTTTCTGGGATCCCAAAGATCAAAGATAATTTGT
GAGACCTTAAGTTTGCCTTGGCCTTGTTGCTTCAGAGGGGAAACAGAGCTTTGTGGGTGTTGCT
GCTGTTGTTTGCTGTTCTCTGCCTGCTTGTATGCACGGAGGAAATGCTCCTGCTTCTTGGGCTA
GTCTGCTCTTGCGCAGAGCGCCATCCTGAGACTTGCCATTGACCGGGGCTCTCCTGAAGACAGG
TGCCACATTTTCATCCAGGTTTGTCATTGCTCTCCGCAGAGATCTATTGTTCAATAAATAATAG
ACTCCGTATCCCACTGGGTAAGCCAGAGAGGGAGCCTGGGGATGCTCGCTGGCTGCAGTTTCTA
CGGTGACGCCTGGCCCAGAGTCAAACATTCAGAATGAAAGTTGGCTTGGCTACAACTAATTTCT
GTCTTTGTGGGTTTTAGGTAAGAGAGATGGTAGTAACGTCAGAGACAGCGTATGTGGGCAGAAA
TTGGTAGTTTTCATGTCTCTCGAATGCCAGGTATGTAGCCAACTCTGAGCAGCTAGCTGCTGTG
AGAATTTGGAGAAGTCGTTTAGTCATACATGTGCCTGCTGCGTCTTCATCAGCAGTGCGCTTGG
GATGTGAGCACCACCCCGAGACCCAGCAGGAGGATTAGCAGTGAGCACCCTCTTCCCCAGAGCT
CGCCGCTCAAGGTTCACATGAGTGAGGCCCCTCACGTGCATGGGGACTCCTTGTTGGCTCTGGC
TCACTGGAATTAAGAAGCCAAAATTTCTTTTCTTTTTAGATTTTGTATGTGTGTGTGTGTGTGT
GTGTGTGTATGCGCGCGCGTGTGCGTGTGCGTGTACAGAGGAGGCCAGAAGAGCTCCCCCTGGA
GCTGGAGTCACAGGCAGCCAATAGCCAGCTGACATGGGCTCTGAGAACGGAACTTGGGTCCTCT
GGAAGAGCAGCACGTGCTCCTAACTGCTGAGCCATCTCTGCAGCCTCCAGAGGTGAAGTTCCTG
GAGAACTTTGGTGGTTTACAGAATGAAGCTCAAACCTGGATGCAGATTCTTGCTTTGTGGATCT
TTCAGTTCTCCTAACCCCCTCCCCGCAATGTAACGCACTAGGAATGGAGAACAGGGTACATGCG
CTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCTTCCCAGCACTGAGCAGAACACTGC
TTTCTAGCTCTTCTTCCCAGCACTGAGCAGAACACTGCTTTCTAGCTCTTCCCTGTACTAAAGT
GTTCTTTTGTGTCTCAACTGAAACTTGGGGAAGACTACACAGTTTCTGCCACAGAAATGGAAGA
TCCATCGGAGAACTCCATCTTGAAGTGTCTGTTTTTACACATGTACTGTTTCTGGGATCCCAAA
GATCAAAGATAATTTGTGAGACATAAAATTTGCCTTGACCTTGTTGCTTTCTAGAGGGGAATTG
GGAAATATGCACTCAGGCTTTTACAATTCATTTCCAAGAGACAGTAAATCAGGGGCTATCTACA
ATCAGACCTTTGTGCTTTATGATCTTGTTTGTGGGATTTTGGTGTTCTCCAGACAGTAGAAGAT
GTAATTGGAGTCTTTAAAAAGGCAAGGCCTTTGTGAGTGGGCTGTCCAAACCTCCATGGGTAAG
ATGAGCCCAGCAGTCCCTTGGCCATGGGAGTGAGTGCTCCCCACAAATGTGACACCAGGTTAGC
AGGTCCTCTTGTCCTCCATCTGAGCTACATGAAGAACCCACCCTGTTCTGACCCCTACATTACT
TCCATACCACTGTGTGTTCCCAGGAAAGAGGACCGAGGCTGCTTTTTAAAAACTCAAGGGAAAA
CACTAAGGATCAAGACTGGAATGAGGAATCCTTCCTATTAGAAGTGTGTCTTAGGAGCTTGCAA
AGTACTGTGTAGGTCACCCTCACTGCCTCCTTGGCAGGCCACTCTGACGCCGCTAAAACAAAGC
CTTAAATGTGTTTTGGGGACAGTGCTGTCTGATCCCTCAGCCACATAGTTGCTAGGGTATTTGT
AAATCTCTGCTCTCCAAGTGGCATTTCCCTCTGATGAATGATTGACTGTTGTCCACTGTACAGC
CTGCCTAGAAGGAAAACTGCTGTAAACTTTCTCTTACACAATAGTCCTTGGGACTCTAGAATTT
TTAGCAAGAGAAAACTTTGTATTCTAGAACTTTCCACTGCCAGAAAACACAATGCCAGTAAGAG
TCTATGTAATACTGATATCTGCCTAACAGACTTCCTTTTTTTGGGTAGGACATCAGCTTTTTAT
TATTCAGCTCAACCAACAGAAGTAAAAACCTGTAGAAGCACAGCTTTAGCCATGAAGTTTAACA
CAAGCAATGCGCCATGCGCTCGCTCATCTCTCTAAACCAGCCGAGTAGGTTTCTGTGACGTAAC
TTCCTGTTAGCCACACTTTGGCACCCTGCCTTCCAAAAAGAGCCTTTTCCGGCAAGCAGTGGGT
TCGAATTGTGCTGGAGGCCTGCCGGGAGCCTGGTCTGCTCAGAAGACTGGCAAGCGTGCAGGGC
CTGTGAGGTGAGCGTGAAAGCCACATGAACTAAACTGAGACTCATGTCACAGCCGTACAGACAG
CCGTACGGACAGCCATGTGGACCTGAGCTGGCTCTGAGCATTTCACTGTGGGAACGGAAGGCTG
AACGGTTAGCACAGCATGCGGGGTGGCTCTCTCTACCTTGGGCTTGAGATTCATAAGTACCGGA
GAGATGTCCTGGTGTCACTTTTTACCTTAAAAGATCCATATGTAAAAGGCAAAGCTTTTAACCC
AGAGCTAGCCTGCTCTACTGATACAAATAAAAGGTTTTTAGGCAGAGCCGTGGACAAGATCCCG
TCAGAGCAGCAGGCACATACATGCTGCCAGAGTCGGGGTGACTTGATGATTTGTTGTGTCTTCG
GGGCCTTTTCATTTGATCTGATTTCTGTGTTTGACGGTAGATTGAGTGAATCCCAGGAATGGTT
TTAATATTAAATCCAATATTTAATATGGAGCCACGCTGGAGGCTGAGGGCTGGACTCTGCACTC
TTCGTGTCCCTCTATCGCCAACTTAGCACCTCAGACTCAGATACAAGGCCTTTAAAATGGAAAT
TTTACCAACTGCTGCTGTTTGTGCAAAATAATATCCTGTGATCACATTGTTTAAATGGAAAATA
AAGTGCTTTCTTTTATGAAAACAGTCTGATTGTTGGTGTGCCCTGGAAGTGTTTTGTCTTAAAA
CACTCTGTGCTCTGAGCTGTGGGGCCTCCTGACTACCTTGTTGTTGTCCCCATCCAGTGGTCTT
TGCAGACCCTAAACTTGGTCTCCCTCTTTTCTTCCTGGCTTTGTAGGTGAGGTACTGTTTATTC
AGTGCTAGTTAGTGGCAGTGTTTCAGACCACGTCTTCACTATGGCCTATCAAGAGTCTGGTGGT
CTCAAAGGTCTGTAGGCTGGCACTGTCCAGGGGGCTCAGTCAATATGTGTCTCTAGGAAGCAGT
TTCTGGTTGATGTTTGGGTGAAGCAAAGATACAGTTTATGACAGAAAGCATGATTTTTATGTGA
CTTATTTAGGACATGATAAAGAATTCAGCCTTATCTCTAGGGTTGGCATTAAATTAATATTTGT
GTGTGGTTTTGAATTTTTTAGTGTTAATGGCCAGCATTTAGTAAGTGTGCCATAATTAAGTATA
AACAGTGGTTTAGATGGAATAAGATTAAATATGATTTAGTTTCATTTTTCTTGTGGTCATTTGT
CTTTGAAACACGTGTCTCTTGACGTGTCACATGATATTAAAGAAAAAGGTGTGTGGGCTGCAGC
TTAGCTCGGCTCTGGCGTTTTGTGGTCTCAGCCTGTCACTACATATCTTTCATGAGAAAAATGA
TCAGAGCCACTTTGCATGGCATGCAGCTGGGATAGCTTAAGAACTGTGCTGGGTCAAGCAAGTT
TACGCAACAGTTTCATTTTACCAATTCGGATGCTCTGGGCTATGAGAAGCTTTCTCGTTCCACT
ATGTGCATTTGTAGACTATTTGAATTGGTCTCAATAAAGACATGTTTTACCTGA

hide sequence

RefSeq Acc Id:

XM_039088541 ⟹ XP_038944469

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,987 - 70,240,971 (+)	NCBI
mRatBN7.2	11	56,719,085 - 56,735,063 (+)	NCBI

RefSeq Acc Id:

XM_039088542 ⟹ XP_038944470

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,987 - 70,240,971 (+)	NCBI
mRatBN7.2	11	56,719,086 - 56,735,063 (+)	NCBI

RefSeq Acc Id:

XM_063270672 ⟹ XP_063126742

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,991 - 70,240,971 (+)	NCBI

RefSeq Acc Id:

XM_063270673 ⟹ XP_063126743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,224,581 - 70,240,971 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_998792	(Get FASTA)	NCBI Sequence Viewer
	XP_008766960	(Get FASTA)	NCBI Sequence Viewer
	XP_008766961	(Get FASTA)	NCBI Sequence Viewer
	XP_008766962	(Get FASTA)	NCBI Sequence Viewer
	XP_008766963	(Get FASTA)	NCBI Sequence Viewer
	XP_038944469	(Get FASTA)	NCBI Sequence Viewer
	XP_038944470	(Get FASTA)	NCBI Sequence Viewer
	XP_063126742	(Get FASTA)	NCBI Sequence Viewer
	XP_063126743	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAX73400	(Get FASTA)	NCBI Sequence Viewer
	BAD16732	(Get FASTA)	NCBI Sequence Viewer
	EDM11171	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000076233
GenBank Protein	Q76IC6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_998792 ⟸ NM_213627

- UniProtKB:

Q2TGI7 (UniProtKB/Swiss-Prot), Q76IC6 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MKPVKKKKTEEPELEPLCCCEYIDRNGEKNHVAACLCDCQDLDEGCDRWLTCKSLRPETCERIT
DTISDRLRIPWLRGAKKVNISILPPLVLLPVLLRVASWHFLLGVVVLTSLPMLALWYYYLTHRR
KEQTLFFLSLGLFSLGYMYYVFLQEVVPQGHVGPAQLALLTCGLFLILVALYRAKKNPGYLSNP
ACNDKSPSNSQIECPIKKGQEKTKGFPGTDTSGSLNNRTLKDDAKGSSRVGLDSPAKSKEDWCA
KCQLVRPARAWHCRICGICVRRMDHHCVWINSCVGESNHQAFILALSIFLLTSVYGISLTLNTI
CRDRSLFTALFYCPGVYANYSSALSFTCVWYSVIITAGMAYIFLIQLINISYNVTEREVQQALR
QKTGRRLLCGLIVDTGQYNRGFLRNWLQFSTLGTRTVHTPAEDIV

hide sequence

RefSeq Acc Id:	XP_008766962 ⟸ XM_008768740
- Peptide Label:	isoform X2
- UniProtKB:	Q2TGI7 (UniProtKB/Swiss-Prot), Q76IC6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MKPVKKKKTEEPELEPLCCCEYIDRNGEKNHVAACLCDCQDLDEGCDRWLTCKSLRPETCERIT DTISDRLRIPWLRGAKKVNISILPPLVLLPVLLRVASWHFLLGVVVLTSLPMLALWYYYLTHRR KEQTLFFLSLGLFSLGYMYYVFLQEVVPQGHVGPAQLALLTCGLFLILVALYRAKKNPGYLSNP ACNDKSPSNSQIECPIKKGQEKTKGFPGTDTSGSLNNRTLKDDAKGSSRVGLDSPAKSKEDWCA KCQLVRPARAWHCRICGICVRRMDHHCVWINSCVGESNHQAFILALSIFLLTSVYGISLTLNTI CRDRSLFTALFYCPGVYANYSSALSFTCVWYSVIITAGMAYIFLIQLINISYNVTEREVQQALR QKTGRRLLCGLIVDTGQYNRGFLRNWLQFSTLGTRTVHTPAEDIV hide sequence

RefSeq Acc Id:	XP_008766960 ⟸ XM_008768738
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2RE80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKPVKKKKTEEPELEPLCCCEYIDRNGEKNHVAACLCDCQDLDEGCDRWLTCKSLRPETCERIT DTISDRLRIPWLRGAKKVNISILPPLVLLPVLLRVASWHFLLGVVVLTSLPMLALWYYYLTHRR KEQTLFFLSLGLFSLGYMYYVFLQEVVPQGHVGPAQLALLTCGLFLILVALYRAKKNPGYLSNP ACNDKSPSNSQIECPIKKGQEKTKGFPGTDTSGSLNNRTLKDDAKGSSRVGLDSPAKSKEDWCA KCQLVRPARAWHCRICGICVRRMDHHCVWLACVSCELQETFSNKCICPPPPAVLRINSCVGESN HQAFILALSIFLLTSVYGISLTLNTICRDRSLFTALFYCPGVYANYSSALSFTCVWYSVIITAG MAYIFLIQLINISYNVTEREVQQALRQKTGRRLLCGLIVDTGQYNRGFLRNWLQFSTLGTRTVH TPAEDIV hide sequence

RefSeq Acc Id:	XP_008766961 ⟸ XM_008768739
- Peptide Label:	isoform X2
- UniProtKB:	Q2TGI7 (UniProtKB/Swiss-Prot), Q76IC6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MKPVKKKKTEEPELEPLCCCEYIDRNGEKNHVAACLCDCQDLDEGCDRWLTCKSLRPETCERIT DTISDRLRIPWLRGAKKVNISILPPLVLLPVLLRVASWHFLLGVVVLTSLPMLALWYYYLTHRR KEQTLFFLSLGLFSLGYMYYVFLQEVVPQGHVGPAQLALLTCGLFLILVALYRAKKNPGYLSNP ACNDKSPSNSQIECPIKKGQEKTKGFPGTDTSGSLNNRTLKDDAKGSSRVGLDSPAKSKEDWCA KCQLVRPARAWHCRICGICVRRMDHHCVWINSCVGESNHQAFILALSIFLLTSVYGISLTLNTI CRDRSLFTALFYCPGVYANYSSALSFTCVWYSVIITAGMAYIFLIQLINISYNVTEREVQQALR QKTGRRLLCGLIVDTGQYNRGFLRNWLQFSTLGTRTVHTPAEDIV hide sequence

RefSeq Acc Id:

XP_008766963 ⟸ XM_008768741

- Peptide Label:

isoform X3

- Sequence:

show sequence

MKPVKKKKTEEPELEPLCCCEYIDRNGEKNHVAACLCDCQDLDEGCDRWLTCKSLRPETCERIT
DTISDRLRIPWLRGAKKVNISILPPLVLLPVLLRVASWHFLLGVVVLTSLPMLALWYYYLTHRR
KEQTLFFLSLGLFSLGYMYYVFLQEVVPQGHVGPAQLALLTCGLFLILVALYRAKKNPGYLSNP
ACNDKSPSNSQIECPIKKGQEKTKGFPGTDTSGSLNNRTLKDDAKGSSRVGLDSPAKSKEDWCA
KCQLVRPARAWHCRICGICVRRMDHHCVCCVGESNHQAFILALSIFLLTSVYGISLTLNTICRD
RSLFTALFYCPGVYANYSSALSFTCVWYSVIITAGMAYIFLIQLINISYNVTEREVQQALRQKT
GRRLLCGLIVDTGQYNRGFLRNWLQFSTLGTRTVHTPAEDIV

hide sequence

Ensembl Acc Id:

ENSRNOP00000075515 ⟸ ENSRNOT00000079423

Ensembl Acc Id:

ENSRNOP00000073720 ⟸ ENSRNOT00000079521

Ensembl Acc Id:

ENSRNOP00000076233 ⟸ ENSRNOT00000093325

RefSeq Acc Id:	XP_038944469 ⟸ XM_039088541
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2RE80 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944470 ⟸ XM_039088542
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063126743 ⟸ XM_063270673
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063126742 ⟸ XM_063270672
- Peptide Label:	isoform X2
- UniProtKB:	Q76IC6 (UniProtKB/Swiss-Prot), Q2TGI7 (UniProtKB/Swiss-Prot)

Protein Domains

DHHC Palmitoyltransferase DHHC

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q76IC6-F1-model_v2	AlphaFold	Q76IC6	1-429	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698155

Promoter ID:

EPDNEW_R8678

Type:

initiation region

Name:

Zdhhc23_1

Description:

zinc finger, DHHC-type containing 23

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	11	61,661,640 - 61,661,700	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1303254	AgrOrtholog
BioCyc Gene	G2FUF-21335	BioCyc
Ensembl Genes	ENSRNOG00000060348	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000093325	ENTREZGENE
InterPro	Palmitoyltrfase_DHHC	UniProtKB/Swiss-Prot
	PFA4/ZDH16/20/ERF2-like	UniProtKB/Swiss-Prot
KEGG Report	rno:363783	UniProtKB/Swiss-Prot
NCBI Gene	363783	ENTREZGENE
PANTHER	PALMITOYLTRANSFERASE ZDHHC23	UniProtKB/Swiss-Prot
	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	UniProtKB/Swiss-Prot
Pfam	DHHC	UniProtKB/Swiss-Prot
PhenoGen	Zdhhc23	PhenoGen
PROSITE	DHHC	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000060348	RatGTEx
UniProt	A0A8L2RE80	ENTREZGENE, UniProtKB/TrEMBL
	A6IR18_RAT	UniProtKB/TrEMBL
	Q2TGI7	ENTREZGENE
	Q76IC6	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q2TGI7	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-11-11	Zdhhc23	zinc finger DHHC-type palmitoyltransferase 23	Zdhhc23	zinc finger, DHHC-type containing 23	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-07-29	Zdhhc23	zinc finger, DHHC-type containing 23	LOC100911213	uncharacterized LOC100911213	Data merged from RGD:6494284	737654	PROVISIONAL
2012-07-05	LOC100911213	uncharacterized LOC100911213			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-11-17	Zdhhc23	zinc finger, DHHC-type containing 23	Zdhhc23	zinc finger, DHHC domain containing 23	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Zdhhc23	zinc finger, DHHC domain containing 23	nidd	nNOS-intereacting DHHC-containing Dem protein-L	Symbol and Name updated	1299863	APPROVED
2005-07-14	nidd	nNOS-intereacting DHHC-containing Dem protein-L			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains 5 transmembrane domains, a Zn finger DHHC domain and a PDZ-binding motif at the C-terminal tail	1303989
gene_physical_interaction	interacts with nNOS through the PDZ binding motif	1303989

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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