Zdhhc19 (zinc finger DHHC-type palmitoyltransferase 19)

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Gene: Zdhhc19 (zinc finger DHHC-type palmitoyltransferase 19) Rattus norvegicus

Analyze

Symbol:

Zdhhc19

Name:

zinc finger DHHC-type palmitoyltransferase 19

RGD ID:

1309014

Description:

Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in Golgi membrane and perinucleolar compartment. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC19 (zinc finger DHHC-type palmitoyltransferase 19); INTERACTS WITH bisphenol A; dibutyl phthalate; furan.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC288045; membrane-associated DHHC19 zinc finger protein; MGC156468; palmitoyltransferase ZDHHC19; probable palmitoyltransferase ZDHHC19; RGD1560310; zinc finger, DHHC domain containing 19; zinc finger, DHHC-type containing 19

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	11	68,277,847 - 68,289,110 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	68,277,848 - 68,288,954 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	77,114,893 - 77,125,993 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	11	69,779,264 - 69,790,498 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	11	68,804,008 - 68,815,111 (-)	NCBI	Rnor_WKY
Rnor_6.0	11	71,490,346 - 71,522,959 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	71,511,715 - 71,523,267 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	74,596,365 - 74,607,670 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	70,093,702 - 70,105,297 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	70,151,290 - 70,152,622 (-)	NCBI
Celera	11	67,710,629 - 67,721,664 (-)	NCBI		Celera
Cytogenetic Map	11	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

chromosome 3q29 microdeletion syndrome (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP)

cisplatin (ISO)

dibutyl phthalate (EXP)

dimethylarsinic acid (ISO)

furan (EXP)

GW 4064 (ISO)

indole-3-methanol (EXP)

lipopolysaccharide (ISO)

methapyrilene (ISO)

methylarsonic acid (ISO)

N-acetyl-L-cysteine (EXP)

N-nitrosodiethylamine (EXP)

paracetamol (EXP)

pirinixic acid (ISO)

resveratrol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

peptidyl-L-cysteine S-palmitoylation (IBA,ISO)

protein targeting to membrane (IBA)

Cellular Component

endoplasmic reticulum (IBA,ISO)

Golgi apparatus (IBA)

Golgi membrane (ISO)

perinucleolar compartment (ISO)

Molecular Function

protein binding (ISO)

protein-cysteine S-palmitoyltransferase activity (IBA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:16647879	PMID:20074548

Genomics

Comparative Map Data

Zdhhc19
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	11	68,277,847 - 68,289,110 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	68,277,848 - 68,288,954 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	77,114,893 - 77,125,993 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	11	69,779,264 - 69,790,498 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	11	68,804,008 - 68,815,111 (-)	NCBI	Rnor_WKY
Rnor_6.0	11	71,490,346 - 71,522,959 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	71,511,715 - 71,523,267 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	74,596,365 - 74,607,670 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	70,093,702 - 70,105,297 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	70,151,290 - 70,152,622 (-)	NCBI
Celera	11	67,710,629 - 67,721,664 (-)	NCBI		Celera
Cytogenetic Map	11	q22	NCBI

ZDHHC19
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	196,197,452 - 196,211,400 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	3	196,197,452 - 196,211,437 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	195,924,323 - 195,938,271 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	197,408,720 - 197,422,697 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	197,412,634 - 197,426,610	NCBI
Celera	3	194,504,929 - 194,518,767 (-)	NCBI		Celera
Cytogenetic Map	3	q29	NCBI
HuRef	3	193,224,055 - 193,238,141 (-)	NCBI		HuRef
CHM1_1	3	195,895,258 - 195,909,130 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	198,917,010 - 198,930,875 (-)	NCBI		T2T-CHM13v2.0

Zdhhc19
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	32,315,059 - 32,326,032 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	32,315,083 - 32,380,784 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	32,496,241 - 32,507,214 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	32,496,265 - 32,561,966 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	32,496,367 - 32,507,300 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	32,416,028 - 32,426,961 (+)	NCBI		MGSCv36	mm8
Celera	16	32,978,956 - 32,990,189 (+)	NCBI		Celera
Cytogenetic Map	16	B3	NCBI

Zdhhc19
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	12,432,279 - 12,442,249 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	12,432,342 - 12,442,411 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZDHHC19
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	203,485,139 - 203,499,031 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	203,486,005 - 203,498,915 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	3	193,537,735 - 193,551,564 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

ZDHHC19
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	29,332,947 - 29,335,942 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	29,332,959 - 29,336,531 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	29,349,643 - 29,360,097 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	29,559,340 - 29,569,886 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	29,559,287 - 29,569,795 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	29,321,996 - 29,356,421 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	29,399,761 - 29,410,316 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	29,998,746 - 30,033,332 (-)	NCBI		UU_Cfam_GSD_1.0

LOC101977244
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	125,041,020 - 125,060,330 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936784	748,381 - 833,841 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZDHHC19
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	133,875,309 - 133,885,763 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	133,873,072 - 133,886,202 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	143,313,255 - 143,331,419 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZDHHC19
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	90,974,291 - 90,989,857 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	90,974,703 - 90,989,006 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	64,816,002 - 64,830,466 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zdhhc19
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	61,362,941 - 61,370,514 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	61,357,276 - 61,405,048 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Zdhhc19
34 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	124
Count of miRNA genes:	103
Interacting mature miRNAs:	112
Transcripts:	ENSRNOT00000033026
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	1	69446234	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	18976208	86241447	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	23280456	68280456	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	23280456	68280456	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	27672410	82846715	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	29528418	82566702	Rat
2298551	Neuinf10	Neuroinflammation QTL 10	3.7		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	11	31239134	78851519	Rat
70180	BpQTLcluster10	Blood pressure QTL cluster 10	3.19		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	11	34918041	79918041	Rat
1300135	Rf19	Renal function QTL 19	3.38		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	11	40946188	82566702	Rat
2312566	Glom20	Glomerulus QTL 20	3.6	0.001	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	44285759	82566702	Rat
1581565	Pur10	Proteinuria QTL 10		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	44803318	82846466	Rat
1581572	Uae35	Urinary albumin excretion QTL 35		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	44803318	82846466	Rat
4889859	Pur28	Proteinuria QTL 28	19.5	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	11	45459323	75190161	Rat
724561	Plsm4	Polydactyly-luxate syndrome (PLS) morphotypes QTL 4		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	11	54457534	86241447	Rat
4889521	Gluco62	Glucose level QTL 62	2.82	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	55136729	82993457	Rat
7411658	Foco27	Food consumption QTL 27	16.2	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	11	56351424	86241447	Rat
631506	Bp104	Blood pressure QTL 104	2.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	59802794	82566545	Rat
70208	Niddm22	Non-insulin dependent diabetes mellitus QTL 22	3.61		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	11	59802794	82566553	Rat
10058954	Gmadr7	Adrenal mass QTL 7	2.49	0.0049	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	60346590	86241447	Rat
1549848	Bvd6	Brain ventricular dilatation QTL 6	3.1	0.0001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	11	66113321	82169223	Rat
634339	Niddm50	Non-insulin dependent diabetes mellitus QTL 50	3.32		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	11	66422148	86241447	Rat
1354593	Stl12	Serum triglyceride level QTL 12	3.36		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	11	66422148	86241447	Rat

Markers in Region

RH138375

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	68,277,868 - 68,278,535 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	71,511,866 - 71,512,532	NCBI	Rnor6.0
Rnor_5.0	11	74,596,387 - 74,597,053	UniSTS	Rnor5.0
RGSC_v3.4	11	70,093,724 - 70,094,390	UniSTS	RGSC3.4
Celera	11	67,710,651 - 67,711,317	UniSTS
RH 3.4 Map	11	403.9	UniSTS
Cytogenetic Map	11	q22	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium											7
Low		4	13	12	5	12		1	5	5	4	3
Below cutoff	3	17	31	17	13	17	8	9	46	22	13	7	8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001039259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005491000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC136847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY886535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC127441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000033026 ⟹ ENSRNOP00000038846

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	68,277,848 - 68,288,954 (-)	Ensembl
Rnor_6.0 Ensembl	11	71,511,715 - 71,523,267 (-)	Ensembl

RefSeq Acc Id:

NM_001039259 ⟹ NP_001034348

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	11	68,277,847 - 68,288,953 (-)	NCBI
Rnor_6.0	11	71,511,844 - 71,522,945 (-)	NCBI
Rnor_5.0	11	74,596,365 - 74,607,670 (-)	NCBI
RGSC_v3.4	11	70,093,702 - 70,105,297 (-)	RGD
Celera	11	67,710,629 - 67,721,664 (-)	RGD

Sequence:

show sequence

GAAGACTTCCATAAATCCCTCTGACACTCAGTATCTTTGCTAACCCCTCTCTTAACGTCTCCGG
CACACCAACAGGGCTCAGTACGTGAATTTCTGGGGGATGAACCCCAGCAGCCTCCAAGGAGGCA
CAGCTGAGGCTCCTTGGACTCTGGCATAAGTGATGGGGAGGAGGAGATGGTCAATATCGAAAGT
GACCAGAAGTAGCCAGAGCCACCGTCCCTCTACCTCTGTGACATCACACTGAGATCTCTTTTTT
CCTCTCTCCTGGGCTGTGGCTTCTGTTGCTATGGCAATGAAATTCTGAGTCCTTAAGGGAGAGA
GCAGCTAGAATGACGTCTCATCCCCTACCTGATGACGCTGTGACCCCTGTGAAGGAACCACAAC
AGCTGCCCGAGATCCCTCTTTCATGGTTCTTCCCGAGCCTGTTTGCTGCCTTCAATGTATCTCT
GCTGGTGTTCTTGAGTGGCCTTTTCTTCGGATTTCCTTGTAGGTGGCTGGTTCAGAACGGGGAG
TGGGTCTTTCCCGCGGTCACAGGACCACTCTTCATCCTCACCTTCTTCAGTCTCGTCTCGCTCA
ATTTCTCAGACCCGGGTATCTTACATCGAGGCTCCGTCAGTGAGGATCCCAGGACCGTGCATGT
GGTGCGAGTGAACCAAAGGGCTTTCCGCCTGGAATGGTGCCCAAAGTGCCTCTTCCATCGCCCG
CCCCGTACCTACCACTGCCCATGGTGCAACATTTGTGTCGAGGACTTTGACCACCATTGCAAAT
GGGTCAACAACTGCATCGGTCACCGCAACTTCCGCCTCTTCGTGCTGCTGATCCTGTTCCTCTG
TCTCTACTCTGGAGCCCTGCTGGTCACCTGCCTGATGTTCCTAATTCACACGAGCCATCTGCCC
TTCTCCCTGGACAAGGCGATGGCCATCCTGGTGGCTGTGCCCGCTGCGGGCTTCCTGATTCCAC
TCTTCCTGCTGATGCTGATCCAGGCCCTATCTGTGAGCAGGGCGGAGCGCTCCTACGAGAGCAA
GTGCAGGGACCATGAGGAATACAACCCCTTTGACCAGGGCTTTGCCAAGAACTGGTATCTAACA
ATGTGTGCACCACTGGGTCCCAATTACATGTCTGAAGTTGTCTGTCTGCAAAGACCGGTGGGGA
CAGAACGAATCCAGGAGAAGACTAAACACCCACCACCGTGTCCTCCCAAACCTTGTGGCCCAGG
TCATCCTGGGCCACAGATCCAACCTCGGCACACACGAGGGAAGGGACCCCCAGGGAGTGGCGAG
GCTGCAGCTCTCCAGGAGATGAGAAGCCTACCTGCATCTGTGGAAAAGTCCCCAGGAGGTCCAC
GCCAACCCATGGCTGAATCTGCTGATGAGGCTCACCCCGGTACTCACAGAGCCAGGACCACCTG
AACTTGCGCCTCCGAGTTTGAATCCGAGTGGTCCACTTGGGCCCAGCCCCTGTTTCACTGGTGG
GAGCACTGACACCCACCAATCCTCATTAAATATTGATTGACGGTTTCTGAAAAAAAAAAAAAAA
AA

hide sequence

RefSeq Acc Id:

XM_006248447 ⟹ XP_006248509

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	11	68,277,847 - 68,289,110 (-)	NCBI
Rnor_6.0	11	71,511,844 - 71,522,959 (-)	NCBI
Rnor_5.0	11	74,596,365 - 74,607,670 (-)	NCBI

Sequence:

show sequence

GGGATCAGTCCCATGAAGACTTCACATAAATCCCTCTGAGACTCAGTATCTTTGCTAACCCCTC
TCTTAACGTCTCCGGCACACCAACAGGGCTCAGTACGTGAATTTCTGGGGGATGAACCCCAGCA
GCCTCCAAGGAGGCACAGCTGAGGCTCCTTGGACTCTGGCATAAGTGATGGGGAGGAGGAGATG
GTCAATATCGAAAGTGACCAGAAGTAGCCAGAGCCACCGTCCCTCTACCTCTGTGACATCACAC
TGAGATCTCTTTTTTCCTCTCTCCTGGGCTGTGGCTTCTGTTGCTATGGCAATGAAATTCTGAG
TCCTTAAGGGAGAGAGCAGCTAGAATGACGTCTCATCCCCTACCTGATGACGCTGTGACCCCTG
TGAAGGAACCACAACAGCTGCCCGAGATCCCTCTTTCATGGTTCTTCCCGAGCCTGTTTGCTGC
CTTCAATGTATCTCTGCTGGTGTTCTTGAGTGGCCTTTTCTTCGGATTTCCGTGGCTGGTTCAG
AACGGGGAGTGGGTCTTTCCCGCGGTCACAGGACCACTCTTCATCCTCACCTTCTTCAGTCTCG
TCTCGCTCAATTTCTCAGACCCGGGTATCTTACATCGAGGCTCCGTCAGTGAGGATCCCAGGAC
CGTGCATGTGGTGCGAGTGAACCAAAGGGCTTTCCGCCTGGAATGGTGCCCAAAGTGCCTCTTC
CATCGCCCGCCCCGTACCTACCACTGCCCATGGTGCAACATTTGTGTCGAGGACTTTGACCACC
ATTGCAAATGGGTCAACAACTGCATCGGTCACCGCAACTTCCGCCTCTTCGTGCTGCTGATCCT
GTTCCTCTGTCTCTACTCTGGAGCCCTGCTGGTCACCTGCCTGATGTTCCTAATTCACACGAGC
CATCTGCCCTTCTCCCTGGACAAGGCGATGGCCATCCTGGTGGCTGTGCCCGCTGCGGGCTTCC
TGATTCCACTCTTCCTGCTGATGCTGATCCAGGCCCTATCTGTGAGCAGGGCGGAGCGCTCCTA
CGAGAGCAAGTGCAGGGACCATGAGGAATACAACCCCTTTGACCAGGGCTTTGCCAAGAACTGG
TATCTAACAATGTGTGCACCACTGGGTCCCAATTACATGTCTGAAGTTGTCTGTCTGCAAAGAC
CGGTGGGGACAGAACGAATCCAGGAGAAGACTAAACACCCACCACCGTGTCCTCCCAAACCTTG
TGGCCCAGGTCATCCTGGGCCACAGATCCAACCTCGGCACACACGAGGGAAGGGACCCCCAGGG
AGTGGCGAGGCTGCAGCTCTCCAGGAGATGAGAAGCCTACCTGCATCTGTGGAAAAGTCCCCAG
GAGGTCCACGCCAACCCATGGCTGAATCTGCTGATGAGGCTCACCCCGGTACTCACAGAGCCAG
GACCACCTGAACTTGCGCCTCCGAGTTTGAATCCGAGTGGTCCACTTGGGCCCAGCCCCTGTTT
CACTGGTGGGAGCACTGACACCCACCAATCCTCATTAAATATTGATTGACGGTTTCTGA

hide sequence

RefSeq Acc Id:

XM_039088116 ⟹ XP_038944044

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	11	68,278,581 - 68,289,099 (-)	NCBI

RefSeq Acc Id:

XM_039088117 ⟹ XP_038944045

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	11	68,277,847 - 68,286,332 (-)	NCBI

RefSeq Acc Id:

XR_005491000

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	11	68,278,652 - 68,289,099 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001034348	(Get FASTA)	NCBI Sequence Viewer
	XP_006248509	(Get FASTA)	NCBI Sequence Viewer
	XP_038944044	(Get FASTA)	NCBI Sequence Viewer
	XP_038944045	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI27442	(Get FASTA)	NCBI Sequence Viewer
	AAX73397	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001034348 ⟸ NM_001039259

- UniProtKB:

Q2TGJ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTSHPLPDDAVTPVKEPQQLPEIPLSWFFPSLFAAFNVSLLVFLSGLFFGFPCRWLVQNGEWVF
PAVTGPLFILTFFSLVSLNFSDPGILHRGSVSEDPRTVHVVRVNQRAFRLEWCPKCLFHRPPRT
YHCPWCNICVEDFDHHCKWVNNCIGHRNFRLFVLLILFLCLYSGALLVTCLMFLIHTSHLPFSL
DKAMAILVAVPAAGFLIPLFLLMLIQALSVSRAERSYESKCRDHEEYNPFDQGFAKNWYLTMCA
PLGPNYMSEVVCLQRPVGTERIQEKTKHPPPCPPKPCGPGHPGPQIQPRHTRGKGPPGSGEAAA
LQEMRSLPASVEKSPGGPRQPMAESADEAHPGTHRARTT

hide sequence

RefSeq Acc Id:

XP_006248509 ⟸ XM_006248447

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTSHPLPDDAVTPVKEPQQLPEIPLSWFFPSLFAAFNVSLLVFLSGLFFGFPWLVQNGEWVFPA
VTGPLFILTFFSLVSLNFSDPGILHRGSVSEDPRTVHVVRVNQRAFRLEWCPKCLFHRPPRTYH
CPWCNICVEDFDHHCKWVNNCIGHRNFRLFVLLILFLCLYSGALLVTCLMFLIHTSHLPFSLDK
AMAILVAVPAAGFLIPLFLLMLIQALSVSRAERSYESKCRDHEEYNPFDQGFAKNWYLTMCAPL
GPNYMSEVVCLQRPVGTERIQEKTKHPPPCPPKPCGPGHPGPQIQPRHTRGKGPPGSGEAAALQ
EMRSLPASVEKSPGGPRQPMAESADEAHPGTHRARTT

hide sequence

RefSeq Acc Id:

ENSRNOP00000038846 ⟸ ENSRNOT00000033026

RefSeq Acc Id:	XP_038944045 ⟸ XM_039088117
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038944044 ⟸ XM_039088116
- Peptide Label:	isoform X2

Protein Domains

DHHC

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q2TGJ0-F1-model_v2	AlphaFold	Q2TGJ0	1-359	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309014	AgrOrtholog
BioCyc Gene	G2FUF-21098	BioCyc
Ensembl Genes	ENSRNOG00000025055	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000038846	ENTREZGENE
	ENSRNOP00000038846.4	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000033026	ENTREZGENE
	ENSRNOT00000033026.7	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7111596	IMAGE-MGC_LOAD
InterPro	Znf_DHHC	UniProtKB/TrEMBL
KEGG Report	rno:288045	UniProtKB/TrEMBL
MGC_CLONE	MGC:156468	IMAGE-MGC_LOAD
NCBI Gene	288045	ENTREZGENE
Pfam	zf-DHHC	UniProtKB/TrEMBL
PhenoGen	Zdhhc19	PhenoGen
UniProt	Q2TGJ0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-11-11	Zdhhc19	zinc finger DHHC-type palmitoyltransferase 19	Zdhhc19	zinc finger, DHHC-type containing 19	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-11-17	Zdhhc19	zinc finger, DHHC-type containing 19	Zdhhc19	zinc finger, DHHC domain containing 19	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	Zdhhc19	zinc finger, DHHC domain containing 19	Zdhhc19_predicted	zinc finger, DHHC domain containing 19 (predicted)	Symbol and Name status set to approved	1299863	APPROVED
2005-01-12	Zdhhc19_predicted	zinc finger, DHHC domain containing 19 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar