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Gene: Usf3 (upstream transcription factor family member 3) Rattus norvegicus
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Symbol: Usf3
Name: upstream transcription factor family member 3
Description: Predicted to have protein dimerization activity. Predicted to be involved in negative regulation of epithelial to mesenchymal transition. Orthologous to human USF3 (upstream transcription factor family member 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; vinclozolin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: basic helix-loop-helix domain-containing protein USF3; LOC303946; RGD1560175; similar to hypothetical protein KIAA2018
Orthologs:
Homo sapiens (human) : USF3 (upstream transcription factor family member 3)  HGNC  Alliance
Mus musculus (house mouse) : Usf3 (upstream transcription factor family member 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usf3 (upstream transcription factor family member 3)
Pan paniscus (bonobo/pygmy chimpanzee) : USF3 (upstream transcription factor family member 3)
Canis lupus familiaris (dog) : USF3 (upstream transcription factor family member 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usf3 (upstream transcription factor family member 3)
Sus scrofa (pig) : USF3 (upstream transcription factor family member 3)
Chlorocebus sabaeus (African green monkey) : USF3 (upstream transcription factor family member 3)
Heterocephalus glaber (naked mole-rat) : Usf3 (upstream transcription factor family member 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01161,427,140 - 61,499,668 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,432,064 - 61,499,557 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01165,536,227 - 65,606,562 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41158,041,160 - 58,078,821 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1156,027,174 - 56,083,028 (-)NCBICelera
Cytogenetic Map11q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Usf3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560175
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.