Gene: Tmem39a (transmembrane protein 39a) Rattus norvegicus
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Symbol: Tmem39a
Name: transmembrane protein 39a
Description: FOUND IN integral component of membrane (inferred); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; dibutyl phthalate
AGR Description: Predicted to localize to the integral component of membrane; orthologous to human TMEM39A (transmembrane protein 39A).
Merged Description: Predicted to localize to the integral component of membrane; orthologous to human TMEM39A (transmembrane protein 39A); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC288092; RGD1306421; similar to RIKEN cDNA 2610033C09
Orthologs:
Homo sapiens (human) : TMEM39A (transmembrane protein 39A)  HGNC  Alliance
Mus musculus (house mouse) : Tmem39a (transmembrane protein 39a)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem39a (transmembrane protein 39A)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM39A (transmembrane protein 39A)
Canis lupus familiaris (dog) : TMEM39A (transmembrane protein 39A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem39a (transmembrane protein 39A)
Sus scrofa (pig) : TMEM39A (transmembrane protein 39A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01164,723,181 - 64,752,514 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01167,357,137 - 67,386,470 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41163,938,077 - 63,967,213 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11163,995,665 - 64,024,802 (-)NCBI
Celera1161,663,433 - 61,692,755 (-)NCBICelera
Cytogenetic Map11q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tmem39a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306421
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.