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Gene: Ydjc (YdjC chitooligosaccharide deacetylase homolog) Rattus norvegicus
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Symbol: Ydjc
Name: YdjC chitooligosaccharide deacetylase homolog
Description: Predicted to have deacetylase activity. Predicted to be involved in carbohydrate metabolic process. Orthologous to human YDJC (YdjC chitooligosaccharide deacetylase homolog); INTERACTS WITH (+)-schisandrin B; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: carbohydrate deacetylase; hypothetical LOC287938; LOC287938; UPF0249 protein ydjC homolog; YdjC homolog; YdjC homolog (bacterial)
Orthologs:
Homo sapiens (human) : YDJC (YdjC chitooligosaccharide deacetylase homolog)  HGNC  Alliance
Mus musculus (house mouse) : Ydjc (YdjC homolog (bacterial))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ydjc (YdjC chitooligosaccharide deacetylase homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : YDJC (YdjC chitooligosaccharide deacetylase homolog)
Canis lupus familiaris (dog) : YDJC (YdjC chitooligosaccharide deacetylase homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ydjc (YdjC chitooligosaccharide deacetylase homolog)
Sus scrofa (pig) : YDJC (YdjC chitooligosaccharide deacetylase homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01188,089,142 - 88,094,254 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1188,090,921 - 88,093,516 (-)Ensembl
Rnor_5.01191,135,410 - 91,146,385 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,845,500 - 85,848,083 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11185,886,097 - 85,888,680 (-)NCBI
Celera1182,603,512 - 82,605,347 (-)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ydjc
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359227
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.