D11Rat107 Marker Search Result - Rat Genome Database

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Marker: D11Rat107

Symbol: D11Rat107
Previously known as: oxsts9258; R0300-C06; 
RGD ID: 42952
Expected Size: 150 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81179,002,550 - 79,002,700 (+)Marker Load Pipeline
mRatBN7.21165,497,303 - 65,497,453 (+)MAPPERmRatBN7.2
Rnor_6.01168,721,529 - 68,721,678NCBIRnor6.0
Rnor_5.01171,812,987 - 71,813,136UniSTSRnor5.0
RGSC_v3.41167,316,657 - 67,316,807RGDRGSC3.4
RGSC_v3.41167,316,658 - 67,316,807UniSTSRGSC3.4
RGSC_v3.11167,374,246 - 67,374,396RGD
Celera1164,955,907 - 64,956,024UniSTS
SHRSP x BN Map1129.8399UniSTS
SHRSP x BN Map1129.8399RGD
Cytogenetic Map11q22UniSTS
Is Marker For: Genes:   Adcy5  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CTTGCTTTGGGGCATTTATT
Reverse Primer TCCATCTGTCTGTCCTTCCC
 
Template 
AGGTCGANTCTAGAGGATCCCCCTTGCTTTGGGGCATTTATTTGTGTGTGTTTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGGTTTTTTT
AGGGGAGGGGAGGGGAAGGACAGACAGATGGATGGGAATCTGGAGTAGGAAGAGATAACAAGAG
AAGGGACTTAGGTAGGTACAGAGGAAGATGGTAATAACCTGTCAGGTCAGGACAGTAGGGTACC
GAGTCTCGAATTTCGTAATTCATGGTTCATAGTCTGTTTTCCTGTGTGAAATTGTTATCCGTCT
TCACAATTNCCATCATCAATCATATCGAGCCGGAAGTCATAAAGTGTAAAGTCCTGGGGTGTCC
TAATGAGTGAGACTAACTCACATTAATTGCGTTGCGCTTCACTGCCCGCTTTCCAGTCGGGAAA
CCTGTTCGTGACCAGCTGTCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATT
GGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCC
TGGCCCTGAGAGAGTTGCAGCAAGGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTT
GATGGTGGTTCCGAAANCGGCAAAATCCCTATAAATCAAAAGATAGCCCGAGATAGGGTTGAGT
GTTGTTCCAGTNTGGAACAAGNGTCCACTATTAAAGAACGTGGACTCCNCGTCAAAGGGCGAAA
AACGTCTATANGGGANGCNCTANGTNACNTCACCAATCAGTTNTGGGGNGAGGTGCGTAAGCAC
TAATCGGNCCTANNGNNCCC


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
71014Adcy5adenylate cyclase 5116547161265618877Rat
GenBank Nucleotide AC125384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)114545932375190161Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)111945620576331918Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat

1 to 10 of 24 rows


Database
Acc Id
Source(s)
NCBI Gene 64532 UniSTS