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Gene: Atg3 (autophagy related 3) Rattus norvegicus
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Symbol: Atg3
Name: autophagy related 3
Description: Predicted to have Atg12 transferase activity; Atg8 ligase activity; and enzyme binding activity. Involved in autophagy. Localizes to the cytosol. Orthologous to human ATG3 (autophagy related 3); PARTICIPATES IN autophagy pathway; INTERACTS WITH 3,3',5,5'-tetrabromobisphenol A; 4-nonylphenol; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: APG3 autophagy 3-like; APG3 autophagy 3-like (S. cerevisiae); APG3-like; Apg3l; ATG3 autophagy related 3 homolog; ATG3 autophagy related 3 homolog (S. cerevisiae); autophagy-related 3; autophagy-related 3 (yeast); autophagy-related protein 3; PIG-1; Pig1; preconditioning-inducible gene 1 protein; ubiquitin-like-conjugating enzyme ATG3
Orthologs:
Homo sapiens (human) : ATG3 (autophagy related 3)  HGNC  Alliance
Mus musculus (house mouse) : Atg3 (autophagy related 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg3 (autophagy related 3)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG3 (autophagy related 3)
Canis lupus familiaris (dog) : ATG3 (autophagy related 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg3 (autophagy related 3)
Sus scrofa (pig) : ATG3 (autophagy related 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01160,585,192 - 60,613,706 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1160,585,171 - 60,613,718 (-)Ensembl
Rnor_5.01164,687,322 - 64,715,836 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,162,205 - 57,190,568 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11157,219,793 - 57,248,157 (-)NCBI
Celera1155,191,074 - 55,219,238 (-)NCBICelera
Cytogenetic Map11q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atg3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 708464
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.