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Gene: Sdf2l1 (stromal cell-derived factor 2-like 1) Rattus norvegicus
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Symbol: Sdf2l1
Name: stromal cell-derived factor 2-like 1
Description: Exhibits ATPase binding activity; chaperone binding activity; and misfolded protein binding activity. Involved in ER-associated misfolded protein catabolic process and regulation of apoptotic process. Localizes to the endoplasmic reticulum and membrane. Used to study type 2 diabetes mellitus. Orthologous to human SDF2L1 (stromal cell derived factor 2 like 1); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; INTERACTS WITH 6-propyl-2-thiouracil; Actein; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC680945; similar to stromal cell-derived factor 2-like 1; stromal cell-derived factor 2-like protein 1
Orthologs:
Homo sapiens (human) : SDF2L1 (stromal cell derived factor 2 like 1)  HGNC  Alliance
Mus musculus (house mouse) : Sdf2l1 (stromal cell-derived factor 2-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sdf2l1 (stromal cell derived factor 2 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SDF2L1 (stromal cell derived factor 2 like 1)
Canis lupus familiaris (dog) : SDF2L1 (stromal cell derived factor 2 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sdf2l1 (stromal cell derived factor 2 like 1)
Sus scrofa (pig) : SDF2L1 (stromal cell derived factor 2 like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01188,122,271 - 88,124,513 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1188,122,271 - 88,124,513 (+)Ensembl
Rnor_5.01191,174,846 - 91,177,088 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,878,093 - 85,880,335 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1182,628,352 - 82,630,594 (+)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sdf2l1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1585844
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.