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Gene: Tfap2c (transcription factor AP-2 gamma) Rattus norvegicus
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Symbol: Tfap2c
Name: transcription factor AP-2 gamma
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II regulatory region sequence-specific DNA binding activity; and protein dimerization activity. Predicted to be involved in several processes, including animal organ development; regulation of gene expression; and trophectodermal cell differentiation. Predicted to localize to the mitochondrion and nucleoplasm. Orthologous to human TFAP2C (transcription factor AP-2 gamma); INTERACTS WITH bisphenol A; copper atom; copper(0).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: activating enhancer binding protein 2 gamma; activator protein 2 gamma; AP2-gamma; Tcfap2c; transcription factor AP-2, gamma
Orthologs:
Homo sapiens (human) : TFAP2C (transcription factor AP-2 gamma)  HGNC  Alliance
Mus musculus (house mouse) : Tfap2c (transcription factor AP-2, gamma)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tfap2c (transcription factor AP-2 gamma)
Pan paniscus (bonobo/pygmy chimpanzee) : TFAP2C (transcription factor AP-2 gamma)
Canis lupus familiaris (dog) : TFAP2C (transcription factor AP-2 gamma)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tfap2c (transcription factor AP-2 gamma)
Sus scrofa (pig) : TFAP2C (transcription factor AP-2 gamma)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03170,550,314 - 170,558,197 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3170,550,314 - 170,558,194 (+)Ensembl
Rnor_5.03176,625,472 - 176,633,355 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43163,459,283 - 163,467,166 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13163,365,524 - 163,373,057 (+)NCBI
Celera3160,513,939 - 160,521,822 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tfap2c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303185
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.