Gene: Pitx1 (paired-like homeodomain 1) Rattus norvegicus
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Symbol: Pitx1
Name: paired-like homeodomain 1
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity; DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II proximal promoter sequence-specific DNA binding (ortholog); INVOLVED IN regulation of transcription, DNA-templated; branchiomeric skeletal muscle development (ortholog); cartilage development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); clubfoot (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog); INTERACTS WITH 7,12-dimethyltetraphene; all-trans-retinoic acid; ammonium chloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Bft; homeobox protein PITX1; paired-like homeodomain transcription factor 1; pituitary homeobox 1
Orthologs:
Homo sapiens (human) : PITX1 (paired like homeodomain 1)  HGNC  Alliance
Mus musculus (house mouse) : Pitx1 (paired-like homeodomain transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pitx1 (paired like homeodomain 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PITX1 (paired like homeodomain 1)
Canis lupus familiaris (dog) : PITX1 (paired like homeodomain 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pitx1 (paired like homeodomain 1)
Sus scrofa (pig) : PITX1 (paired like homeodomain 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0178,873,184 - 8,884,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01711,038,827 - 11,050,071 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41714,834,144 - 14,840,303 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11714,834,143 - 14,840,302 (+)NCBI
Celera178,876,388 - 8,882,546 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
  
More on Pitx1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 69253
Created: 2001-11-14
Species: Rattus norvegicus
Last Modified: 2019-02-05
Status: ACTIVE



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