Nrg3 (neuregulin 3) - Rat Genome Database

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Gene: Nrg3 (neuregulin 3) Rattus norvegicus
Analyze
Symbol: Nrg3
Name: neuregulin 3
RGD ID: 1559678
Description: Predicted to enable chemorepellent activity. Predicted to be involved in ERBB4-ERBB4 signaling pathway and modulation of chemical synaptic transmission. Predicted to act upstream of or within several processes, including intracellular signal transduction; mammary placode formation; and regulation of cell migration. Predicted to be active in extracellular space; glutamatergic synapse; and plasma membrane. Orthologous to human NRG3 (neuregulin 3); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; INTERACTS WITH 3-chloropropane-1,2-diol; bisphenol A; 1,2-dichloroethane (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC498596; pro-neuregulin-3, membrane-bound isoform; RGD1559678; similar to neuregulin-3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21614,229,270 - 15,352,505 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1614,235,157 - 15,352,368 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01615,763,031 - 16,932,208 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1615,764,632 - 15,798,974 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01615,661,430 - 16,817,319 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41614,679,903 - 15,817,157 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1614,466,369 - 15,581,462 (-)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Neuregulins and cancer. Montero JC, etal., Clin Cancer Res. 2008 Jun 1;14(11):3237-41. doi: 10.1158/1078-0432.CCR-07-5133.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:9275162   PMID:10723730   PMID:16140987   PMID:22376909   PMID:29114105   PMID:30328115  


Genomics

Comparative Map Data
Nrg3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21614,229,270 - 15,352,505 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1614,235,157 - 15,352,368 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01615,763,031 - 16,932,208 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1615,764,632 - 15,798,974 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01615,661,430 - 16,817,319 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41614,679,903 - 15,817,157 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1614,466,369 - 15,581,462 (-)NCBICelera
Cytogenetic Map16p14NCBI
NRG3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381081,875,194 - 82,987,179 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1081,875,194 - 82,987,179 (+)EnsemblGRCh38hg38GRCh38
GRCh371083,634,950 - 84,746,935 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361083,625,077 - 84,735,341 (+)NCBINCBI36Build 36hg18NCBI36
Celera1077,630,757 - 78,742,147 (+)NCBICelera
Cytogenetic Map10q23.1NCBI
HuRef1077,483,814 - 78,594,633 (+)NCBIHuRef
CHM1_11083,917,602 - 85,028,760 (+)NCBICHM1_1
T2T-CHM13v2.01082,749,017 - 83,860,555 (+)NCBIT2T-CHM13v2.0
Nrg3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391438,086,093 - 39,195,045 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1438,090,909 - 39,195,045 (-)EnsemblGRCm39 Ensembl
GRCm381438,365,102 - 39,473,235 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1438,368,952 - 39,473,088 (-)EnsemblGRCm38mm10GRCm38
MGSCv371439,182,137 - 40,286,376 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361437,282,204 - 38,384,967 (-)NCBIMGSCv36mm8
Celera1434,560,237 - 35,661,300 (-)NCBICelera
Cytogenetic Map14BNCBI
Nrg3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555101,615,316 - 2,618,617 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555101,615,316 - 2,620,031 (+)NCBIChiLan1.0ChiLan1.0
NRG3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11081,862,024 - 82,974,743 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1081,862,036 - 82,973,334 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01078,267,693 - 79,384,895 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
NRG3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1430,515,845 - 31,557,598 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl430,515,890 - 31,556,152 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha430,570,501 - 31,546,936 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0430,834,334 - 31,875,634 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl430,834,349 - 31,874,016 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1430,699,630 - 31,739,836 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0430,896,586 - 31,931,272 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0431,385,545 - 32,426,952 (+)NCBIUU_Cfam_GSD_1.0
LOC101957192
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721349,019,288 - 50,047,975 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367161,362,574 - 2,391,432 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRG3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1483,317,019 - 84,402,943 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11483,316,962 - 84,405,347 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21490,842,758 - 91,108,804 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRG3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1948,846,287 - 49,957,238 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660489,110,091 - 10,240,887 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrg3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248414,219,084 - 5,285,240 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248414,213,089 - 5,285,255 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Position Markers
D16Got15  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21614,809,226 - 14,809,357 (+)MAPPERmRatBN7.2
Rnor_6.01616,381,383 - 16,381,513NCBIRnor6.0
Rnor_5.01616,270,747 - 16,270,877UniSTSRnor5.0
RGSC_v3.41615,267,951 - 15,268,082RGDRGSC3.4
RGSC_v3.41615,267,952 - 15,268,082UniSTSRGSC3.4
RGSC_v3.11615,267,950 - 15,268,080RGD
Celera1615,039,042 - 15,039,172UniSTS
RH 3.4 Map16132.5UniSTS
RH 3.4 Map16132.5RGD
RH 2.0 Map1692.9RGD
Cytogenetic Map16p14UniSTS
D16Got101  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21615,085,394 - 15,085,632 (+)MAPPERmRatBN7.2
Rnor_6.01616,659,553 - 16,659,790NCBIRnor6.0
Rnor_5.01616,548,851 - 16,549,088UniSTSRnor5.0
RGSC_v3.41615,547,850 - 15,548,087UniSTSRGSC3.4
Celera1615,314,900 - 15,315,137UniSTS
Cytogenetic Map16p14UniSTS
BF412035  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21614,499,115 - 14,499,330 (+)MAPPERmRatBN7.2
Rnor_6.01616,029,664 - 16,029,878NCBIRnor6.0
Rnor_5.01615,927,226 - 15,927,440UniSTSRnor5.0
RGSC_v3.41614,950,282 - 14,950,496UniSTSRGSC3.4
Celera1614,729,871 - 14,730,085UniSTS
RH 3.4 Map16126.1UniSTS
Cytogenetic Map16p14UniSTS
RH138878  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21614,605,047 - 14,605,231 (+)MAPPERmRatBN7.2
Rnor_6.01616,166,733 - 16,166,916NCBIRnor6.0
Rnor_5.01616,056,547 - 16,056,730UniSTSRnor5.0
RGSC_v3.41615,059,615 - 15,059,798UniSTSRGSC3.4
Celera1614,835,871 - 14,836,054UniSTS
RH 3.4 Map16126.7UniSTS
Cytogenetic Map16p14UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8hepatic copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)16285170915884239Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338015021361552Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760916039848Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16422773017696785Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:74
Count of miRNA genes:54
Interacting mature miRNAs:56
Transcripts:ENSRNOT00000046842, ENSRNOT00000065946
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 54 7
Low 2 18 2
Below cutoff 2 12 8 2 5 2 6 7 2 14 23 5 6

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000046842   ⟹   ENSRNOP00000042884
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1615,764,632 - 15,798,974 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000065946   ⟹   ENSRNOP00000059751
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1615,764,632 - 15,798,974 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000099299   ⟹   ENSRNOP00000077709
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1614,235,157 - 15,352,368 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000111170   ⟹   ENSRNOP00000080898
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1614,235,157 - 15,352,368 (-)Ensembl
RefSeq Acc Id: XM_017600398   ⟹   XP_017455887
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
Rnor_6.01615,763,031 - 16,932,208 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039095027   ⟹   XP_038950955
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
RefSeq Acc Id: XM_039095028   ⟹   XP_038950956
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
RefSeq Acc Id: XM_039095029   ⟹   XP_038950957
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
RefSeq Acc Id: XM_039095030   ⟹   XP_038950958
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
RefSeq Acc Id: XM_039095031   ⟹   XP_038950959
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
RefSeq Acc Id: XM_039095032   ⟹   XP_038950960
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
RefSeq Acc Id: XM_039095033   ⟹   XP_038950961
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21614,229,270 - 15,352,505 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_017455887   ⟸   XM_017600398
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSRNOP00000059751   ⟸   ENSRNOT00000065946
RefSeq Acc Id: ENSRNOP00000042884   ⟸   ENSRNOT00000046842
RefSeq Acc Id: XP_038950957   ⟸   XM_039095029
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038950961   ⟸   XM_039095033
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038950960   ⟸   XM_039095032
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038950956   ⟸   XM_039095028
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038950959   ⟸   XM_039095031
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038950955   ⟸   XM_039095027
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038950958   ⟸   XM_039095030
- Peptide Label: isoform X5
RefSeq Acc Id: ENSRNOP00000077709   ⟸   ENSRNOT00000099299
RefSeq Acc Id: ENSRNOP00000080898   ⟸   ENSRNOT00000111170
Protein Domains
EGF-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M182-F1-model_v2 AlphaFold F1M182 1-369 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Strain Variation

Strain Sequence Variants (mRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1559678 AgrOrtholog
BioCyc Gene G2FUF-11959 BioCyc
Ensembl Genes ENSRNOG00000033894 Ensembl
  ENSRNOG00000063450 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000077709 ENTREZGENE
  ENSRNOP00000077709.1 UniProtKB/TrEMBL
  ENSRNOP00000080898 ENTREZGENE
  ENSRNOP00000080898.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000099299 ENTREZGENE
  ENSRNOT00000099299.1 UniProtKB/TrEMBL
  ENSRNOT00000111170 ENTREZGENE
  ENSRNOT00000111170.1 UniProtKB/TrEMBL
InterPro EGF-like_dom UniProtKB/TrEMBL
  Neuregulin UniProtKB/TrEMBL
NCBI Gene 498596 ENTREZGENE
PANTHER PTHR11100 UniProtKB/TrEMBL
PhenoGen Nrg3 PhenoGen
PROSITE EGF_1 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
UniProt A0A8I5Y1H8_RAT UniProtKB/TrEMBL
  A0A8I5ZU04_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 Nrg3  neuregulin 3  Nrg3  neuregulin 3  Data Merged 737654 PROVISIONAL
2021-08-09 Nrg3  neuregulin 3      Symbol and Name status set to provisional 45752 PROVISIONAL
2008-02-28 Nrg3  neuregulin 3  RGD1559678_predicted  similar to neuregulin-3 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1559678_predicted  similar to neuregulin-3 (predicted)  LOC498596  similar to neuregulin-3  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC498596  similar to neuregulin-3      Symbol and Name status set to provisional 70820 PROVISIONAL