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Gene: Chd7 (chromodomain helicase DNA binding protein 7) Rattus norvegicus
Symbol: Chd7
Name: chromodomain helicase DNA binding protein 7
RGD ID: 1311921
Description: Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and promoter-specific chromatin binding activity. Predicted to be involved in several processes, including adult walking behavior; animal organ development; and nervous system development. Predicted to localize to nucleolus and nucleoplasm. Human ortholog(s) of this gene implicated in CHARGE syndrome; hypogonadotropic hypogonadism 5 with or without anosmia; and idiopathic scoliosis. Orthologous to human CHD7 (chromodomain helicase DNA binding protein 7); PARTICIPATES IN Wnt signaling, non-canonical pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: chromodomain-helicase-DNA-binding protein 7; LOC312974
Homo sapiens (human) : CHD7 (chromodomain helicase DNA binding protein 7)  HGNC  Alliance
Mus musculus (house mouse) : Chd7 (chromodomain helicase DNA binding protein 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chd7 (chromodomain helicase DNA binding protein 7)
Pan paniscus (bonobo/pygmy chimpanzee) : CHD7 (chromodomain helicase DNA binding protein 7)
Canis lupus familiaris (dog) : CHD7 (chromodomain helicase DNA binding protein 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chd7 (chromodomain helicase DNA binding protein 7)
Sus scrofa (pig) : CHD7 (chromodomain helicase DNA binding protein 7)
Chlorocebus sabaeus (African green monkey) : CHD7 (chromodomain helicase DNA binding protein 7)
Heterocephalus glaber (naked mole-rat) : Chd7 (chromodomain helicase DNA binding protein 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0521,769,087 - 21,952,036 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl521,830,882 - 21,950,696 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0526,520,706 - 26,702,242 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4522,549,237 - 22,710,257 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1522,591,442 - 22,710,257 (+)NCBI
Celera521,141,679 - 21,262,470 (+)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Chd7
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311921
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-10-27
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.