Ak8 (adenylate kinase 8) - Rat Genome Database

Name: Ak8
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Ak8 (adenylate kinase 8) Rattus norvegicus

Analyze

Symbol:

Ak8

Name:

adenylate kinase 8

RGD ID:

1303144

Description:

Predicted to enable AMP binding activity and nucleobase-containing compound kinase activity. Predicted to be involved in nucleoside monophosphate phosphorylation and phosphorylation. Predicted to act upstream of or within ventricular system development. Predicted to be located in axoneme and sperm flagellum. Orthologous to human AK8 (adenylate kinase 8); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cadmium dichloride.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

AK 8; ATP-AMP transphosphorylase 8; HypB, AroK, ADK and rho factor domain containing protein RGD1303144; MGC94995; putative adenylate kinase-like protein C9orf98 homolog; RGD1303144; similar to hypothetical protein FLJ32704

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AK8 (adenylate kinase 8)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ak8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ak8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AK8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AK8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ak8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AK8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AK8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ak8 (adenylate kinase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	H2BC1 (H2B clustered histone 1)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Ak8 (adenylate kinase 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	AK8 (adenylate kinase 8)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ak8 (adenylate kinase 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG15543	Alliance	DIOPT (Ensembl Compara\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	ak8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	12,028,895 - 12,144,468 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	12,028,954 - 12,144,465 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	15,101,345 - 15,217,466 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	23,686,303 - 23,802,434 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	21,940,760 - 22,056,878 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	7,279,429 - 7,394,509 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	7,279,340 - 7,394,513 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	12,630,063 - 12,742,336 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	7,687,426 - 7,821,194 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	7,687,725 - 7,821,493 (+)	NCBI
Celera	3	6,809,674 - 6,924,371 (+)	NCBI		Celera
Cytogenetic Map	3	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

developmental and epileptic encephalopathy 14 (ISO)

Ehlers-Danlos syndrome classic type 1 (ISO)

genetic disease (ISO)

hydrocephalus (ISS)

Leigh disease (ISO)

primary coenzyme Q10 deficiency 7 (ISO)

Rafiq syndrome (ISO)

tuberous sclerosis 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

aldehydo-D-glucose (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (EXP)

carbon nanotube (ISO)

chloroprene (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

Cuprizon (EXP)

D-glucose (ISO)

fucoxanthin (ISO)

fulvestrant (ISO)

glucose (ISO)

glycidol (EXP)

iron dichloride (ISO)

lipopolysaccharide (ISO)

methimazole (EXP)

N,N-diethyl-m-toluamide (EXP)

permethrin (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silicon dioxide (ISO)

sodium dodecyl sulfate (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

nucleoside monophosphate phosphorylation (IEA)

phosphorylation (IEA)

ventricular system development (ISO)

Cellular Component

9+2 motile cilium (ISO)

axoneme (ISO)

cytoplasm (IBA)

cytosol (IEA)

sperm flagellum (ISO)

Molecular Function

adenylate kinase activity (IBA,ISO,ISS)

AMP binding (ISO)

ATP binding (IEA)

cytidylate kinase activity (IBA,ISO,ISS)

nucleoside diphosphate kinase activity (IBA,ISO,ISS)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:10215863	PMID:21080915	PMID:21746835	PMID:23416111	PMID:24740601

Genomics

Comparative Map Data

Ak8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	12,028,895 - 12,144,468 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	12,028,954 - 12,144,465 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	15,101,345 - 15,217,466 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	23,686,303 - 23,802,434 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	21,940,760 - 22,056,878 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	7,279,429 - 7,394,509 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	7,279,340 - 7,394,513 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	12,630,063 - 12,742,336 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	7,687,426 - 7,821,194 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	7,687,725 - 7,821,493 (+)	NCBI
Celera	3	6,809,674 - 6,924,371 (+)	NCBI		Celera
Cytogenetic Map	3	p12	NCBI

AK8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	132,725,578 - 132,879,046 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	132,725,578 - 132,878,777 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	135,600,965 - 135,754,433 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	134,590,786 - 134,744,019 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	132,630,518 - 132,783,752	NCBI
Celera	9	106,142,640 - 106,295,933 (-)	NCBI		Celera
Cytogenetic Map	9	q34.13	NCBI
HuRef	9	105,094,698 - 105,248,118 (-)	NCBI		HuRef
CHM1_1	9	135,751,293 - 135,904,675 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	144,936,841 - 145,090,859 (-)	NCBI		T2T-CHM13v2.0

Ak8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	28,588,287 - 28,703,177 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	28,590,176 - 28,703,177 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	28,698,275 - 28,813,165 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	28,700,164 - 28,813,165 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	28,555,681 - 28,668,685 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	28,522,173 - 28,635,167 (+)	NCBI		MGSCv36	mm8
Celera	2	28,404,667 - 28,518,225 (+)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	19.38	NCBI

Ak8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	2,065,004 - 2,185,404 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	2,069,187 - 2,185,469 (-)	NCBI	ChiLan1.0	ChiLan1.0

AK8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	9	6,483,355 - 6,636,112 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	103,842,850 - 103,995,331 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	132,473,492 - 132,625,313 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	132,473,495 - 132,625,313 (-)	Ensembl	panpan1.1		panPan2

AK8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	51,470,688 - 51,598,787 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	51,470,756 - 51,598,786 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	50,735,701 - 50,863,518 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	52,365,877 - 52,493,657 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	52,365,861 - 52,493,656 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	51,144,257 - 51,271,985 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	51,468,738 - 51,596,498 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	51,548,262 - 51,676,101 (+)	NCBI		UU_Cfam_GSD_1.0

Ak8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	199,443,628 - 199,553,090 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	19,209,958 - 19,319,932 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	19,212,155 - 19,321,601 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AK8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	272,497,662 - 272,625,660 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	272,497,661 - 272,625,668 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	306,529,989 - 306,557,132 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AK8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	5,263,126 - 5,414,543 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	5,263,266 - 5,414,927 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666079	10,226,386 - 10,383,078 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ak8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	3,545,403 - 3,660,658 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	3,545,491 - 3,666,266 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ak8
523 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	60
Count of miRNA genes:	55
Interacting mature miRNAs:	58
Transcripts:	ENSRNOT00000017029
Prediction methods:	Microtar, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70202	Alc19	Alcohol consumption QTL 19	2.5		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	3	1	27494778	Rat
631679	Cm10	Cardiac mass QTL 10	7.34	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	1	31158234	Rat
631831	Alc8	Alcohol consumption QTL 8	2.7		consumption behavior trait (VT:0002069)	calculated ethanol drink intake rate (CMO:0001615)	3	1	33230976	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	diastolic blood pressure (CMO:0000005)	3	1	33278763	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	pulse pressure (CMO:0000292)	3	1	33278763	Rat
631545	Bp85	Blood pressure QTL 85	3.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	1	36847613	Rat
2312664	Scl62	Serum cholesterol level QTL 62		0.05	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	1	38710544	Rat
631568	Bp92	Blood pressure QTL 92	2.2	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	39874793	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
1298526	Arunc3	Aerobic running capacity QTL 3	2.2		exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	3	8227194	33703538	Rat
10401810	Kidm53	Kidney mass QTL 53			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	8227194	47233430	Rat
70203	Gcr2	Gastric cancer resistance QTL 2	2.6		stomach morphology trait (VT:0000470)	stomach tumor susceptibility score (CMO:0002043)	3	8658162	27494778	Rat
1358357	Srcrtb1	Stress Responsive Cort Basal QTL 1	6.36	0.002	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	8658162	27494778	Rat
6893355	Bw101	Body weight QTL 101	0.4	0.38	body mass (VT:0001259)	body weight (CMO:0000012)	3	10778704	30357018	Rat
6893363	Bw105	Body weight QTL 105	2.6	0.0036	body mass (VT:0001259)	body weight (CMO:0000012)	3	10778704	30357018	Rat
1558654	Bw56	Body weight QTL 56	4.5	0.0000171	body mass (VT:0001259)	body weight (CMO:0000012)	3	10778704	30357018	Rat
70191	BpQTLcluster4	Blood pressure QTL cluster 4	3		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	3	10778704	50302886	Rat
70191	BpQTLcluster4	Blood pressure QTL cluster 4	3		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	3	10778704	50302886	Rat
1558647	Cm46	Cardiac mass QTL 46	5.4	0.0000055	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	10778823	30356773	Rat
1558650	Cm48	Cardiac mass QTL 48	4	0.0001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	3	10778823	30356773	Rat
1558657	Cm43	Cardiac mass QTL 43	6.6	0.0000000293	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	10778823	30356773	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	10861912	89878372	Rat

Markers in Region

BE118976

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	12,144,263 - 12,144,462 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	7,394,305 - 7,394,503	NCBI	Rnor6.0
Rnor_5.0	3	12,742,132 - 12,742,330	UniSTS	Rnor5.0
RGSC_v3.4	3	7,820,990 - 7,821,188	UniSTS	RGSC3.4
Celera	3	6,924,167 - 6,924,365	UniSTS
RH 3.4 Map	3	26.7	UniSTS
Cytogenetic Map	3	p12	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium											7
Low							1	1	58	8	13	11	1
Below cutoff	2	14	34	18	19	18	1	3	16	15	20		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001004266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC129847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC135306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC079446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000017029 ⟹ ENSRNOP00000017029

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	12,028,954 - 12,144,465 (+)	Ensembl
Rnor_6.0 Ensembl	3	7,279,340 - 7,394,513 (+)	Ensembl

RefSeq Acc Id:

NM_001004266 ⟹ NP_001004266

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	12,028,954 - 12,144,468 (+)	NCBI
Rnor_6.0	3	7,279,429 - 7,394,509 (+)	NCBI
Rnor_5.0	3	12,630,063 - 12,742,336 (+)	NCBI
RGSC_v3.4	3	7,687,426 - 7,821,194 (+)	RGD
Celera	3	6,809,674 - 6,924,371 (+)	RGD

Sequence:

show sequence

GCTCGTTGTCCGAAACATGGATGCTACCTCGGCCCCGCACCGCATCCCCCCAGAAATGCCTCAG
TACGGGGAAGACTACCACATCTTCGAGATGATGCAGAGCATGCTGGAGCAGCTCCTGATTCACC
AGCCAGAGGACCCCATCAGCTTCATGATCAGTCACCTTCGCAGGAACAACGATAATGTGCCGAG
AGTTGTGATATTAGGTCCGCCTGCCTCAGGGAAAACCACCATCGCGATGTGGCTCTGCAAACAT
CTGAACAGCAACCTCATCACCAAGGAGAACTTATTAGAGAGAGAGTTTTCCCTCCTGTCTCTGG
AAGCCAAGAAACACTACCAGGTTTACAAGAGAGTGCCCAATTCGACTCTTGTCAGCCTGGTCCA
GGAGCGTCTGAATGAGGATGACTGCCTCAGAAGGGGCTGGATCCTGGATGGCATCCCCGAGAGG
CGGGAGCAGGCTCTGATGATCCAGACCCTGGGACTGGCACCCAAGCACGTCATCGTGCTTAGCG
CTCCAGACTCCGTCCTGATCGAGAGAAATGTGGGGAAACGGATTGATCCTGTCACTGGAGAGAT
CTATCACACCACCTTCGACTGGCCCCCTGAGCTTGAAATACAGAACAGGCTGATACAGCCAGAA
GGCATCTCGGAGATAGACACAGCGAAGAAGCTGCTGGAATACCACAGGCACATCATCAGGATTC
TTCCTTCCTACCCTAAAATCCTGAAAACTATCAGCTCAGACCAGCCATGTGTGGATGTCTTCTA
CCAGGCTCTGACCTACGTCCAATCTGGCCACCGATGTAATGCCCCGTTCACCCCCAAGGTGCTG
CTGTGTGGGCCAATGGGCTGTGGGAAGAAACTGCAGGCTGCCCTTCTGTCCCAGAAATATGGCC
TCGTGAACATCAGCTGCGGGCAGCTGCTGAAGGAAGCTATGGCAGCCGAATCGAGCCTTGGGGA
CCTCATAGAACCATTCTTTGAAAAGAGGATGACAGTTCCAGACAGTATCATCACCAGAGTTCTG
ACTGAGCGTCTGAAGCAACAAGATTGCATCCAGAAAGGGTGGGTGCTGCACGGCTTCCCAAGAG
ACCTGGACCAGGCCCGGCTGCTGAACTCTATGGGCTACAGTCCCAACAGGGTGTTCTTCCTGAA
TGTGCCGTTGGATTCCATCCTGGAGCGGCTCACACTGAGAAGGACAGACCCTGTCACAGGAGAA
AGGTTCCATCTCATGTACAAGCCCCCTCCCACCATAGAGGTCCAGGCTCGCCTCCTGCAGAACC
CCAAGGATTCAGAGGAGTACATCAAGCTCCAAACGGACTTGTTCTATAGGAACTCTGGGGACCT
GGAGCAGTACTACGATCGGGCCATCATTGTCAACGGTGACCAGGACCCATACACAGTTTTTGAG
TATATAGAGAGTGGAATCATTAATCCTCTGCCCAGGAAAGTTACCTGATATGTGGGGAGCCAGG
AACAAGCCCCAAAGACACTCAAATCCCCTGCCCTCAACCTTCATCAGACCCCACCCAGCCAATA
AAGATGCTAGTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006233794 ⟹ XP_006233856

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	12,028,895 - 12,144,468 (+)	NCBI
Rnor_6.0	3	7,279,442 - 7,394,509 (+)	NCBI
Rnor_5.0	3	12,630,063 - 12,742,336 (+)	NCBI

Sequence:

show sequence

AACATGGATGCTACCTCGGCCCCGCACCGCATCCCCCCAGAAATGCCTCAGTACGGGGAAGACT
ACCACATCTTCGAGATGATGCAGGTGTGATCCAGCTTTCGACTTGTGCTCTCCAGAGGTGAAAA
TGTCTTGTAGGGGCTAGACAGATGCGCTCTTTACCACTCGATGGTTCTGAGAGCCACAGAGCAT
GCTGGAGCAGCTCCTGATTCACCAGCCAGAGGACCCCATCAGCTTCATGATCAGTCACCTTCGC
AGGAACAACGATAATGTGCCGAGAGTTGTGATATTAGGTCCGCCTGCCTCAGGGAAAACCACCA
TCGCGATGTGGCTCTGCAAACATCTGAACAGCAACCTCATCACCAAGGAGAACTTATTAGAGAG
AGAGTTTTCCCTCCTGTCTCTGGAAGCCAAGAAACACTACCAGGTTTACAAGAGAGTGCCCAAT
TCGACTCTTGTCAGCCTGGTCCAGGAGCGTCTGAATGAGGATGACTGCCTCAGAAGGGGCTGGA
TCCTGGATGGCATCCCCGAGAGGCGGGAGCAGGCTCTGATGATCCAGACCCTGGGACTGGCACC
CAAGCACGTCATCGTGCTTAGCGCTCCAGACTCCGTCCTGATCGAGAGAAATGTGGGGAAACGG
ATTGATCCTGTCACTGGAGAGATCTATCACACCACCTTCGACTGGCCCCCTGAGCTTGAAATAC
AGAACAGGCTGATACAGCCAGAAGGCATCTCGGAGATAGACACAGCGAAGAAGCTGCTGGAATA
CCACAGGCACATCATCAGGATTCTTCCTTCCTACCCTAAAATCCTGAAAACTATCAGCTCAGAC
CAGCCATGTGTGGATGTCTTCTACCAGGCTCTGACCTACGTCCAATCTGGCCACCGATGTAATG
CCCCGTTCACCCCCAAGGTGCTGCTGTGTGGGCCAATGGGCTGTGGGAAGAAACTGCAGGCTGC
CCTTCTGTCCCAGAAATATGGCCTCGTGAACATCAGCTGCGGGCAGCTGCTGAAGGAAGCTATG
GCAGCCGAATCGAGCCTTGGGGACCTCATAGAACCATTCTTTGAAAAGAGGATGACAGTTCCAG
ACAGTATCATCACCAGAGTTCTGACTGAGCGTCTGAAGCAACAAGATTGCATCCAGAAAGGGTG
GGTGCTGCACGGCTTCCCAAGAGACCTGGACCAGGCCCGGCTGCTGAACTCTATGGGCTACAGT
CCCAACAGGGTGTTCTTCCTGAATGTGCCGTTGGATTCCATCCTGGAGCGGCTCACACTGAGAA
GGACAGACCCTGTCACAGGAGAAAGGTTCCATCTCATGTACAAGCCCCCTCCCACCATAGAGGT
CCAGGCTCGCCTCCTGCAGAACCCCAAGGATTCAGAGGAGTACATCAAGCTCCAAACGGACTTG
TTCTATAGGAACTCTGGGGACCTGGAGCAGTACTACGATCGGGCCATCATTGTCAACGGTGACC
AGGACCCATACACAGTTTTTGAGTATATAGAGAGTGGAATCATTAATCCTCTGCCCAGGAAAGT
TACCTGATATGTGGGGAGCCAGGAACAAGCCCCAAAGACACTCAAATCCCCTGCCCTCAACCTT
CATCAGACCCCACCCAGCCAATAAAGATGCTAGTCACA

hide sequence

RefSeq Acc Id:

XM_017591825 ⟹ XP_017447314

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	12,028,895 - 12,144,468 (+)	NCBI
Rnor_6.0	3	7,279,444 - 7,394,509 (+)	NCBI

Sequence:

show sequence

CATGGATGCTACCTCGGCCCCGCACCGCATCCCCCCAGAAATGCCTCAGTACGGGGAAGACTAC
CACATCTTCGAGATGATGCAGCCAACTGTGGCCTTTGGCCAAACCAGATCCCCTCCTAGGTGTG
ATCCAGCTTTCGACTTGTGCTCTCCAGAGGTGAAAATGTCTTGTAGGGGCTAGACAGATGCGCT
CTTTACCACTCGATGGTTCTGAGAGCCACAGAGCATGCTGGAGCAGCTCCTGATTCACCAGCCA
GAGGACCCCATCAGCTTCATGATCAGTCACCTTCGCAGGAACAACGATAATGTGCCGAGAGTTG
TGATATTAGGTCCGCCTGCCTCAGGGAAAACCACCATCGCGATGTGGCTCTGCAAACATCTGAA
CAGCAACCTCATCACCAAGGAGAACTTATTAGAGAGAGAGTTTTCCCTCCTGTCTCTGGAAGCC
AAGAAACACTACCAGGTTTACAAGAGAGTGCCCAATTCGACTCTTGTCAGCCTGGTCCAGGAGC
GTCTGAATGAGGATGACTGCCTCAGAAGGGGCTGGATCCTGGATGGCATCCCCGAGAGGCGGGA
GCAGGCTCTGATGATCCAGACCCTGGGACTGGCACCCAAGCACGTCATCGTGCTTAGCGCTCCA
GACTCCGTCCTGATCGAGAGAAATGTGGGGAAACGGATTGATCCTGTCACTGGAGAGATCTATC
ACACCACCTTCGACTGGCCCCCTGAGCTTGAAATACAGAACAGGCTGATACAGCCAGAAGGCAT
CTCGGAGATAGACACAGCGAAGAAGCTGCTGGAATACCACAGGCACATCATCAGGATTCTTCCT
TCCTACCCTAAAATCCTGAAAACTATCAGCTCAGACCAGCCATGTGTGGATGTCTTCTACCAGG
CTCTGACCTACGTCCAATCTGGCCACCGATGTAATGCCCCGTTCACCCCCAAGGTGCTGCTGTG
TGGGCCAATGGGCTGTGGGAAGAAACTGCAGGCTGCCCTTCTGTCCCAGAAATATGGCCTCGTG
AACATCAGCTGCGGGCAGCTGCTGAAGGAAGCTATGGCAGCCGAATCGAGCCTTGGGGACCTCA
TAGAACCATTCTTTGAAAAGAGGATGACAGTTCCAGACAGTATCATCACCAGAGTTCTGACTGA
GCGTCTGAAGCAACAAGATTGCATCCAGAAAGGGTGGGTGCTGCACGGCTTCCCAAGAGACCTG
GACCAGGCCCGGCTGCTGAACTCTATGGGCTACAGTCCCAACAGGGTGTTCTTCCTGAATGTGC
CGTTGGATTCCATCCTGGAGCGGCTCACACTGAGAAGGACAGACCCTGTCACAGGAGAAAGGTT
CCATCTCATGTACAAGCCCCCTCCCACCATAGAGGTCCAGGCTCGCCTCCTGCAGAACCCCAAG
GATTCAGAGGAGTACATCAAGCTCCAAACGGACTTGTTCTATAGGAACTCTGGGGACCTGGAGC
AGTACTACGATCGGGCCATCATTGTCAACGGTGACCAGGACCCATACACAGTTTTTGAGTATAT
AGAGAGTGGAATCATTAATCCTCTGCCCAGGAAAGTTACCTGATATGTGGGGAGCCAGGAACAA
GCCCCAAAGACACTCAAATCCCCTGCCCTCAACCTTCATCAGACCCCACCCAGCCAATAAAGAT
GCTAGTCACA

hide sequence

RefSeq Acc Id:

XM_017591826 ⟹ XP_017447315

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	12,028,895 - 12,144,468 (+)	NCBI
Rnor_6.0	3	7,279,442 - 7,394,509 (+)	NCBI

Sequence:

show sequence

AACATGGATGCTACCTCGGCCCCGCACCGCATCCCCCCAGAAATGCCTCAGTACGGGGAAGACT
ACCACATCTTCGAGATGATGCAGATCCCCTCCTAGGTGTGATCCAGCTTTCGACTTGTGCTCTC
CAGAGGTGAAAATGTCTTGTAGGGGCTAGACAGATGCGCTCTTTACCACTCGATGGTTCTGAGA
GCCACAGAGCATGCTGGAGCAGCTCCTGATTCACCAGCCAGAGGACCCCATCAGCTTCATGATC
AGTCACCTTCGCAGGAACAACGATAATGTGCCGAGAGTTGTGATATTAGGTCCGCCTGCCTCAG
GGAAAACCACCATCGCGATGTGGCTCTGCAAACATCTGAACAGCAACCTCATCACCAAGGAGAA
CTTATTAGAGAGAGAGTTTTCCCTCCTGTCTCTGGAAGCCAAGAAACACTACCAGGTTTACAAG
AGAGTGCCCAATTCGACTCTTGTCAGCCTGGTCCAGGAGCGTCTGAATGAGGATGACTGCCTCA
GAAGGGGCTGGATCCTGGATGGCATCCCCGAGAGGCGGGAGCAGGCTCTGATGATCCAGACCCT
GGGACTGGCACCCAAGCACGTCATCGTGCTTAGCGCTCCAGACTCCGTCCTGATCGAGAGAAAT
GTGGGGAAACGGATTGATCCTGTCACTGGAGAGATCTATCACACCACCTTCGACTGGCCCCCTG
AGCTTGAAATACAGAACAGGCTGATACAGCCAGAAGGCATCTCGGAGATAGACACAGCGAAGAA
GCTGCTGGAATACCACAGGCACATCATCAGGATTCTTCCTTCCTACCCTAAAATCCTGAAAACT
ATCAGCTCAGACCAGCCATGTGTGGATGTCTTCTACCAGGCTCTGACCTACGTCCAATCTGGCC
ACCGATGTAATGCCCCGTTCACCCCCAAGGTGCTGCTGTGTGGGCCAATGGGCTGTGGGAAGAA
ACTGCAGGCTGCCCTTCTGTCCCAGAAATATGGCCTCGTGAACATCAGCTGCGGGCAGCTGCTG
AAGGAAGCTATGGCAGCCGAATCGAGCCTTGGGGACCTCATAGAACCATTCTTTGAAAAGAGGA
TGACAGTTCCAGACAGTATCATCACCAGAGTTCTGACTGAGCGTCTGAAGCAACAAGATTGCAT
CCAGAAAGGGTGGGTGCTGCACGGCTTCCCAAGAGACCTGGACCAGGCCCGGCTGCTGAACTCT
ATGGGCTACAGTCCCAACAGGGTGTTCTTCCTGAATGTGCCGTTGGATTCCATCCTGGAGCGGC
TCACACTGAGAAGGACAGACCCTGTCACAGGAGAAAGGTTCCATCTCATGTACAAGCCCCCTCC
CACCATAGAGGTCCAGGCTCGCCTCCTGCAGAACCCCAAGGATTCAGAGGAGTACATCAAGCTC
CAAACGGACTTGTTCTATAGGAACTCTGGGGACCTGGAGCAGTACTACGATCGGGCCATCATTG
TCAACGGTGACCAGGACCCATACACAGTTTTTGAGTATATAGAGAGTGGAATCATTAATCCTCT
GCCCAGGAAAGTTACCTGATATGTGGGGAGCCAGGAACAAGCCCCAAAGACACTCAAATCCCCT
GCCCTCAACCTTCATCAGACCCCACCCAGCCAATAAAGATGCTAGTCACA

hide sequence

RefSeq Acc Id:

XM_017591827 ⟹ XP_017447316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	12,029,354 - 12,144,468 (+)	NCBI
Rnor_6.0	3	7,279,438 - 7,394,509 (+)	NCBI

Sequence:

show sequence

CCGAAACATGGATGCTACCTCGGCCCCGCACCGCATCCCCCCAGAAATGCCTCAGTACGGGGAA
GACTACCACATCTTCGAGATGATGCAGGAGGAGGAACACACACAAGAAGTCCGGTGATCTGCCC
CCCGGGTGTAGTTTTGGGGTCCGGAATGAGGATTATGAGAGCATGCTGGAGCAGCTCCTGATTC
ACCAGCCAGAGGACCCCATCAGCTTCATGATCAGTCACCTTCGCAGGAACAACGATAATGTGCC
GAGAGTTGTGATATTAGGTCCGCCTGCCTCAGGGAAAACCACCATCGCGATGTGGCTCTGCAAA
CATCTGAACAGCAACCTCATCACCAAGGAGAACTTATTAGAGAGAGAGTTTTCCCTCCTGTCTC
TGGAAGCCAAGAAACACTACCAGGTTTACAAGAGAGTGCCCAATTCGACTCTTGTCAGCCTGGT
CCAGGAGCGTCTGAATGAGGATGACTGCCTCAGAAGGGGCTGGATCCTGGATGGCATCCCCGAG
AGGCGGGAGCAGGCTCTGATGATCCAGACCCTGGGACTGGCACCCAAGCACGTCATCGTGCTTA
GCGCTCCAGACTCCGTCCTGATCGAGAGAAATGTGGGGAAACGGATTGATCCTGTCACTGGAGA
GATCTATCACACCACCTTCGACTGGCCCCCTGAGCTTGAAATACAGAACAGGCTGATACAGCCA
GAAGGCATCTCGGAGATAGACACAGCGAAGAAGCTGCTGGAATACCACAGGCACATCATCAGGA
TTCTTCCTTCCTACCCTAAAATCCTGAAAACTATCAGCTCAGACCAGCCATGTGTGGATGTCTT
CTACCAGGCTCTGACCTACGTCCAATCTGGCCACCGATGTAATGCCCCGTTCACCCCCAAGGTG
CTGCTGTGTGGGCCAATGGGCTGTGGGAAGAAACTGCAGGCTGCCCTTCTGTCCCAGAAATATG
GCCTCGTGAACATCAGCTGCGGGCAGCTGCTGAAGGAAGCTATGGCAGCCGAATCGAGCCTTGG
GGACCTCATAGAACCATTCTTTGAAAAGAGGATGACAGTTCCAGACAGTATCATCACCAGAGTT
CTGACTGAGCGTCTGAAGCAACAAGATTGCATCCAGAAAGGGTGGGTGCTGCACGGCTTCCCAA
GAGACCTGGACCAGGCCCGGCTGCTGAACTCTATGGGCTACAGTCCCAACAGGGTGTTCTTCCT
GAATGTGCCGTTGGATTCCATCCTGGAGCGGCTCACACTGAGAAGGACAGACCCTGTCACAGGA
GAAAGGTTCCATCTCATGTACAAGCCCCCTCCCACCATAGAGGTCCAGGCTCGCCTCCTGCAGA
ACCCCAAGGATTCAGAGGAGTACATCAAGCTCCAAACGGACTTGTTCTATAGGAACTCTGGGGA
CCTGGAGCAGTACTACGATCGGGCCATCATTGTCAACGGTGACCAGGACCCATACACAGTTTTT
GAGTATATAGAGAGTGGAATCATTAATCCTCTGCCCAGGAAAGTTACCTGATATGTGGGGAGCC
AGGAACAAGCCCCAAAGACACTCAAATCCCCTGCCCTCAACCTTCATCAGACCCCACCCAGCCA
ATAAAGATGCTAGTCACA

hide sequence

RefSeq Acc Id:

XM_039105221 ⟹ XP_038961149

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	12,028,895 - 12,114,970 (+)	NCBI

RefSeq Acc Id:

XM_039105222 ⟹ XP_038961150

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	12,028,895 - 12,104,046 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001004266	(Get FASTA)	NCBI Sequence Viewer
	XP_006233856	(Get FASTA)	NCBI Sequence Viewer
	XP_017447314	(Get FASTA)	NCBI Sequence Viewer
	XP_017447315	(Get FASTA)	NCBI Sequence Viewer
	XP_017447316	(Get FASTA)	NCBI Sequence Viewer
	XP_038961149	(Get FASTA)	NCBI Sequence Viewer
	XP_038961150	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH79446	(Get FASTA)	NCBI Sequence Viewer
	EDL93397	(Get FASTA)	NCBI Sequence Viewer
	EDL93398	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000017029
GenBank Protein	Q68FP8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001004266 ⟸ NM_001004266

- UniProtKB:

Q68FP8 (UniProtKB/Swiss-Prot), A6JTP9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDATSAPHRIPPEMPQYGEDYHIFEMMQSMLEQLLIHQPEDPISFMISHLRRNNDNVPRVVILG
PPASGKTTIAMWLCKHLNSNLITKENLLEREFSLLSLEAKKHYQVYKRVPNSTLVSLVQERLNE
DDCLRRGWILDGIPERREQALMIQTLGLAPKHVIVLSAPDSVLIERNVGKRIDPVTGEIYHTTF
DWPPELEIQNRLIQPEGISEIDTAKKLLEYHRHIIRILPSYPKILKTISSDQPCVDVFYQALTY
VQSGHRCNAPFTPKVLLCGPMGCGKKLQAALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPF
FEKRMTVPDSIITRVLTERLKQQDCIQKGWVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDS
ILERLTLRRTDPVTGERFHLMYKPPPTIEVQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYD
RAIIVNGDQDPYTVFEYIESGIINPLPRKVT

hide sequence

RefSeq Acc Id:	XP_006233856 ⟸ XM_006233794
- Peptide Label:	isoform X1
- UniProtKB:	A6JTQ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLEQLLIHQPEDPISFMISHLRRNNDNVPRVVILGPPASGKTTIAMWLCKHLNSNLITKENLLE REFSLLSLEAKKHYQVYKRVPNSTLVSLVQERLNEDDCLRRGWILDGIPERREQALMIQTLGLA PKHVIVLSAPDSVLIERNVGKRIDPVTGEIYHTTFDWPPELEIQNRLIQPEGISEIDTAKKLLE YHRHIIRILPSYPKILKTISSDQPCVDVFYQALTYVQSGHRCNAPFTPKVLLCGPMGCGKKLQA ALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPFFEKRMTVPDSIITRVLTERLKQQDCIQKG WVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDSILERLTLRRTDPVTGERFHLMYKPPPTIE VQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYDRAIIVNGDQDPYTVFEYIESGIINPLPRK VT hide sequence

RefSeq Acc Id:	XP_017447316 ⟸ XM_017591827
- Peptide Label:	isoform X1
- UniProtKB:	A6JTQ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLEQLLIHQPEDPISFMISHLRRNNDNVPRVVILGPPASGKTTIAMWLCKHLNSNLITKENLLE REFSLLSLEAKKHYQVYKRVPNSTLVSLVQERLNEDDCLRRGWILDGIPERREQALMIQTLGLA PKHVIVLSAPDSVLIERNVGKRIDPVTGEIYHTTFDWPPELEIQNRLIQPEGISEIDTAKKLLE YHRHIIRILPSYPKILKTISSDQPCVDVFYQALTYVQSGHRCNAPFTPKVLLCGPMGCGKKLQA ALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPFFEKRMTVPDSIITRVLTERLKQQDCIQKG WVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDSILERLTLRRTDPVTGERFHLMYKPPPTIE VQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYDRAIIVNGDQDPYTVFEYIESGIINPLPRK VT hide sequence

RefSeq Acc Id:	XP_017447315 ⟸ XM_017591826
- Peptide Label:	isoform X1
- UniProtKB:	A6JTQ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLEQLLIHQPEDPISFMISHLRRNNDNVPRVVILGPPASGKTTIAMWLCKHLNSNLITKENLLE REFSLLSLEAKKHYQVYKRVPNSTLVSLVQERLNEDDCLRRGWILDGIPERREQALMIQTLGLA PKHVIVLSAPDSVLIERNVGKRIDPVTGEIYHTTFDWPPELEIQNRLIQPEGISEIDTAKKLLE YHRHIIRILPSYPKILKTISSDQPCVDVFYQALTYVQSGHRCNAPFTPKVLLCGPMGCGKKLQA ALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPFFEKRMTVPDSIITRVLTERLKQQDCIQKG WVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDSILERLTLRRTDPVTGERFHLMYKPPPTIE VQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYDRAIIVNGDQDPYTVFEYIESGIINPLPRK VT hide sequence

RefSeq Acc Id:	XP_017447314 ⟸ XM_017591825
- Peptide Label:	isoform X1
- UniProtKB:	A6JTQ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLEQLLIHQPEDPISFMISHLRRNNDNVPRVVILGPPASGKTTIAMWLCKHLNSNLITKENLLE REFSLLSLEAKKHYQVYKRVPNSTLVSLVQERLNEDDCLRRGWILDGIPERREQALMIQTLGLA PKHVIVLSAPDSVLIERNVGKRIDPVTGEIYHTTFDWPPELEIQNRLIQPEGISEIDTAKKLLE YHRHIIRILPSYPKILKTISSDQPCVDVFYQALTYVQSGHRCNAPFTPKVLLCGPMGCGKKLQA ALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPFFEKRMTVPDSIITRVLTERLKQQDCIQKG WVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDSILERLTLRRTDPVTGERFHLMYKPPPTIE VQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYDRAIIVNGDQDPYTVFEYIESGIINPLPRK VT hide sequence

RefSeq Acc Id:

ENSRNOP00000017029 ⟸ ENSRNOT00000017029

RefSeq Acc Id:	XP_038961149 ⟸ XM_039105221
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038961150 ⟸ XM_039105222
- Peptide Label:	isoform X3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q68FP8-F1-model_v2	AlphaFold	Q68FP8	1-479	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691937

Promoter ID:

EPDNEW_R2462

Type:

multiple initiation site

Name:

Ak8_1

Description:

adenylate kinase 8

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	7,279,418 - 7,279,478	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1303144	AgrOrtholog
BioCyc Gene	G2FUF-50271	BioCyc
BioCyc Pathway	PWY-7219 [adenosine ribonucleotides de novo biosynthesis]	BioCyc
Ensembl Genes	ENSRNOG00000012761	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000017029	ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.50.300	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7115585	IMAGE-MGC_LOAD
InterPro	Adenylat/UMP-CMP_kin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ADK_active_lid_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:311833	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:94995	IMAGE-MGC_LOAD
NCBI Gene	311833	ENTREZGENE
PANTHER	ADENYLATE KINASE 8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NUCLEOTIDE KINASE	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
Pfam	ADK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Ak8	PhenoGen
PRINTS	ADENYLTKNASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012761	RatGTEx
Superfamily-SCOP	Microbial and mitochondrial ADK, insert 'zinc finger' domain	UniProtKB/TrEMBL
	P-loop containing nucleoside triphosphate hydrolases	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
	SSF57774	UniProtKB/Swiss-Prot
UniProt	A6JTP9	ENTREZGENE, UniProtKB/TrEMBL
	A6JTQ0	ENTREZGENE, UniProtKB/TrEMBL
	KAD8_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-02	Ak8	adenylate kinase 8	RGD1303144	HypB, AroK, ADK and rho factor domain containing protein RGD1303144	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-11-17	RGD1303144	HypB, AroK, ADK and rho factor domain containing protein RGD1303144	MGC94995	similar to hypothetical protein FLJ32704	Symbol and Name updated	1299863	APPROVED
2005-09-30	MGC94995				Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI