Alc30 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Alc30 (Alcohol consumption QTL 30) Rattus norvegicus

Symbol: Alc30
Name: Alcohol consumption QTL 30
RGD ID: 8693641
Trait: drinking behavior trait   (VT:0001422)    
Measurement Type: calculated ethanol drink intake rate   (CMO:0001615)    
LOD Score: 2.0
P Value: 0.739
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2310,434,306 - 24,512,004RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.035,654,639 - 25,105,730RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0311,017,022 - 30,321,122RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.436,004,284 - 20,676,398RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: BXH/Ipcv HXB/Ipcv 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method
scale  (IDA)

Vertebrate Trait

Rat Strain
BXH/Ipcv  (IEA)
HXB/Ipcv  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Is the Alcohol Deprivation Effect Genetically Mediated? Studies with HXB/BXH Recombinant Inbred Rat Strains. Vanderlinden LA, etal., Alcohol Clin Exp Res. 2014 Jun 24. doi: 10.1111/acer.12471.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1305459Adamtsl2ADAMTS-like 231039777410434557Rat
1597714Fam163bfamily with sequence similarity 163, member B31043738310466458Rat
2489Dbhdopamine beta-hydroxylase31048826010505245Rat
621125Sardhsarcosine dehydrogenase31051055310575342Rat
7682627LOC102548789uncharacterized LOC10254878931053983710541623Rat
1306285Vav2vav guanine nucleotide exchange factor 231058468810754128Rat
6492996Brd3osBRD3 opposite strand31077022910771860Rat
1308925Brd3bromodomain containing 331077316310829675Rat
7489046Mir7578microRNA 757831077809010778171Rat
41113215LOC120102083small nucleolar RNA SNORA2631082231010822430Rat
1305159Wdr5WD repeat domain 531083696410856682Rat
41292532Trnaa-agc47transfer RNA alanine (anticodon AGC) 4731084647710846558Rat
40972164LOC120102096U6atac minor spliceosomal RNA31085986810859993Rat
3610Rxraretinoid X receptor alpha31098983211076366Rat
70920Col5a1collagen type V alpha 1 chain31120842911356715Rat
621222Fcnbficolin B31139371311402198Rat
620320Olfm1olfactomedin 131152052211558240Rat
9339909LOC103691762microtubule-associated proteins 1A/1B light chain 3B pseudogene31164751611656307Rat
1595050Ppp1r26protein phosphatase 1, regulatory subunit 2631178150411790076Rat
1306233Pierce1piercer of microtubule wall 131179703111801568Rat
1309116Mrps2mitochondrial ribosomal protein S231180304411806341Rat
1591938Gbgt1globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)31182613111829745Rat
3533Ralgdsral guanine nucleotide dissociation stimulator31183968611880059Rat
2331Celcarboxyl ester lipase31188353211891035Rat
1305173Gtf3c5general transcription factor IIIC subunit 531189386711914187Rat
41017381Rnu6-592RNA, U6 small nuclear 59231192697611927077Rat
1311727Gfi1bgrowth factor independent 1B transcriptional repressor31194023211952989Rat
620124Tsc1TSC complex subunit 131196954712018591Rat
727909Spaca9sperm acrosome associated 931201937612028801Rat
1303144Ak8adenylate kinase 831202889512144468Rat
41345559Rnu1-136RNA, U1 small nuclear 13631214941612149579Rat
1592609Gtf3c4general transcription factor IIIC subunit 431215480312172795Rat
1304895Ddx31DEAD-box helicase 3131217282912238392Rat
620648Barhl1BarH-like homeobox 131224132712248649Rat
1564114Cfap77cilia and flagella associated protein 7731225845312381319Rat
1565673Ttf1transcription termination factor 131238462612409257Rat
11377311LOC108350345uncharacterized LOC10835034531240940612427689Rat
1565575Setxsenataxin31242809112480801Rat
1307089Ntng2netrin G231249257412551104Rat
1564993Med27mediator complex subunit 2731262959312803340Rat
619793Rapgef1Rap guanine nucleotide exchange factor 131289834913016234Rat
7582623Prrt1bproline rich transmembrane protein 1B31301985213028865Rat
7579002Golga2l1golgin A2 like 131303343113040798Rat
1359394Trub2TruB pseudouridine synthase family member 231304922013059836Rat
1304638Coq4coenzyme Q431306005413070502Rat
1307383Slc27a4solute carrier family 27 member 431307502213087943Rat
1306599Urm1ubiquitin related modifier 131310034013117064Rat
41238331LOC120101515uncharacterized LOC12010151531311797713119546Rat
1304778Cercamcerebral endothelial cell adhesion molecule31311815013155960Rat
4888575Mir219bmicroRNA 219b31311862313118722Rat
2325334Mir219-2microRNA 219-231311862613118721Rat
3229Odf2outer dense fiber of sperm tails 231316098113207223Rat
1307329Gle1GLE1 RNA export mediator31320931213237018Rat
621714Sptan1spectrin, alpha, non-erythrocytic 131324116413306047Rat
1359465Dync2i2dynein 2 intermediate chain 231330603913322121Rat
41368318SetSet nuclear proto-oncogene31333456413345598Rat
1305921Pkn3protein kinase N331335008213363572Rat
1306593Zdhhc12zinc finger DHHC-type palmitoyltransferase 1231336350413366383Rat
1310284Zer1zyg-11 related, cell cycle regulator31336968813397524Rat
1591937Tbc1d13TBC1 domain family, member 1331340894413425524Rat
1310763Endogendonuclease G31344911313451715Rat
1563514Spout1SPOUT domain containing methyltransferase 131345119113458918Rat
1306912Kyat1kynurenine aminotransferase 131345959813493308Rat
11422106LOC108350591glyceraldehyde-3-phosphate dehydrogenase pseudogene31349774513502170Rat
1311690Lrrc8aleucine rich repeat containing 8 VRAC subunit A31350957713537174Rat
1310377Phyhd1phytanoyl-CoA dioxygenase domain containing 131353567013553797Rat
41021698LOC120101891uncharacterized LOC12010189131353642513538891Rat
1310821Dolkdolichol kinase31355782613559864Rat
1306022Nup188nucleoporin 18831355991713616313Rat
1305886Sh3glb2SH3 domain-containing GRB2-like endophilin B231361693613631785Rat
1310887Miga2mitoguardin 231363623513658895Rat
1586630Rpl38l5ribosomal protein L38 like 531366296613663913Rat
1307447Dolpp1dolichyldiphosphatase 131366600013674312Rat
41403195LOC120102100U2 spliceosomal RNA31367251113672701Rat
1303031Cratcarnitine O-acetyltransferase31367568413689282Rat
1308354Ptpaprotein phosphatase 2 phosphatase activator31368974213720287Rat
1561058Ier5limmediate early response 5-like31374405613745647Rat
41136913LOC120101516uncharacterized LOC12010151631374721513754220Rat
2320952LOC100361008Cytochrome c oxidase subunit 5A, mitochondrial-like31380388713804503Rat
7629611LOC102550392uncharacterized LOC10255039231381381213823726Rat
41342810LOC120101517uncharacterized LOC12010151731394409213949236Rat
7576402LOC102554501uncharacterized LOC10255450131394938313953181Rat
1311084C3h9orf50similar to human chromosome 9 open reading frame 5031407667914087036Rat
1306582Ntmt1N-terminal Xaa-Pro-Lys N-methyltransferase 131409337414110565Rat
1308445Asb6ankyrin repeat and SOCS box-containing 631411062814115274Rat
1311471Prrx2paired related homeobox 231413257414168533Rat
62076Ptgesprostaglandin E synthase31417789214189236Rat
1308431Tor1btorsin family 1, member B31424318114249279Rat
628863Tor1atorsin family 1, member A31425066714257704Rat
1305178C3h9orf78similar to human chromosome 9 open reading frame 7831426426214272552Rat
1305621Usp20ubiquitin specific peptidase 2031427273714306409Rat
621350Fnbp1formin binding protein 131430906714424378Rat
41151319LOC120102117U12 minor spliceosomal RNA31434586014346010Rat
1305882Gpr107G protein-coupled receptor 10731443170414497623Rat
68417Ncs1neuronal calcium sensor 131452322014568829Rat
1585467Hmcn2hemicentin 231458835314738320Rat
2163Ass1argininosuccinate synthase 131474735514796909Rat
41110934LOC120102084small nucleolar RNA SNORA2631476836214768482Rat
1307004Fubp3far upstream element binding protein 331485552714904540Rat
1586401Prdm12PR/SET domain 1231492865114943341Rat
1306573Exosc2exosome component 231496293014973645Rat
1584969Abl1ABL proto-oncogene 1, non-receptor tyrosine kinase31497985315083065Rat
735020Qrfppyroglutamylated RFamide peptide31508804515088419Rat
1309097Fibcd1fibrinogen C domain containing 131509268215126371Rat
40980311LOC120101519uncharacterized LOC12010151931512691915130446Rat
1309399Lamc3laminin subunit gamma 331516522015226697Rat
1305081Aif1lallograft inflammatory factor 1-like31522947615254033Rat
1304977Nup214nucleoporin 21431525511115340568Rat
1566351Fam78afamily with sequence similarity 78, member A31535595815376330Rat
1305821Plpp7phospholipid phosphatase 7 (inactive)31538446115398820Rat
41053147LOC120101521uncharacterized LOC12010152131541798115422253Rat
1595906Prrc2bproline-rich coiled-coil 2B31543335715519105Rat
41368742Snord62asmall nucleolar RNA, C/D box 62A31550684715506931Rat
9258213LOC103691765uncharacterized LOC10369176531550848415521544Rat
41397579Snord62bsmall nucleolar RNA, C/D box 62B31551051515510599Rat
620078Pomt1protein-O-mannosyltransferase 131552071715538579Rat
1308313Uck1uridine-cytidine kinase 131553858015544465Rat
1559966Swi5SWI5 homologous recombination repair protein31557468715583760Rat
620282Golga2golgin A231558386215604279Rat
71096Dnm1dynamin 131560478215648654Rat
41286650LOC120102046U1 spliceosomal RNA31565059515650750Rat
1305336Ciz1CDKN1A interacting zinc finger protein 131565847915673762Rat
1561113Bblnbublin coiled coil protein31567457715677322Rat
69408Lcn2lipocalin 231568068815684033Rat
1310836Ptges2prostaglandin E synthase 231569050115697688Rat
41232171LOC120101523uncharacterized LOC12010152331569409015695381Rat
628666Slc25a25solute carrier family 25 member 2531570870215742195Rat
1597546Naif1nuclear apoptosis inducing factor 131574123915747672Rat
41092074LOC120101524mitochondrial import inner membrane translocase subunit Tim17-B-like31577667815777190Rat
1597535Eeig1estrogen-induced osteoclastogenesis regulator 131582244115854651Rat
2514Dpm2dolichyl-phosphate mannosyltransferase subunit 2, regulatory31585595215858867Rat
1597527Pip5kl1phosphatidylinositol-4-phosphate 5-kinase-like 131586049315869264Rat
1303005St6galnac4ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 431587223015885250Rat
1303196St6galnac6ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 631589427515907502Rat
2076Ak1adenylate kinase 131591243115923045Rat
1593188Engendoglin31593456615972618Rat
1587713Fpgsfolylpolyglutamate synthase31597280015993592Rat
1359638Cdk9cyclin-dependent kinase 931599646716001315Rat
1307287Sh2d3cSH2 domain containing 3C31601062216046491Rat
41245138Rnu6-899RNA, U6 small nuclear 89931602987916029985Rat
1359111Tor2atorsin family 2, member A31604859116053198Rat
2318922Ttc16tetratricopeptide repeat domain 1631605256716064598Rat
1310165Ptrh1peptidyl-tRNA hydrolase 1 homolog31606486716071098Rat
1560002Cfap157cilia and flagella associated protein 15731606652116073504Rat
3785Stxbp1syntaxin binding protein 131607672516138431Rat
1307018Niban2niban apoptosis regulator 231617467416224293Rat
1564403Lrsam1leucine rich repeat and sterile alpha motif containing 131622336716264261Rat
1565106Rpl12ribosomal protein L1231626426916266645Rat
41059769Snora65small nucleolar RNA, H/ACA box 6531626580116265930Rat
620611Slc2a8solute carrier family 2 member 831627491816284536Rat
1564019Garnl3GTPase activating Rap/RanGAP domain-like 331628871816432308Rat
41107518LOC120101525uncharacterized LOC12010152531631154516314634Rat
2319500Ralgps1Ral GEF with PH domain and SH3 binding motif 131643332316670276Rat
620004Angptl2angiopoietin-like 231651718516547024Rat
1596130Zbtb34zinc finger and BTB domain containing 3431670335516726082Rat
1310287Zbtb43zinc finger and BTB domain containing 4331674453516763854Rat
7578982LOC102550017uncharacterized LOC10255001731677835916781260Rat
41260489LOC120102022small nucleolar RNA SNORA4831685366616853809Rat
620843Lmx1bLIM homeobox transcription factor 1 beta31686219516940899Rat
9300457Rpl39l3ribosomal protein L39 like 331696991316970148Rat
1309709Mvb12bmultivesicular body subunit 12B31703400217192658Rat
41014645LOC120101526uncharacterized LOC12010152631724139317247946Rat
11425803LOC108350352uncharacterized LOC10835035231737963817415805Rat
1307198Pbx3PBX homeobox 331748869117682412Rat
9255683LOC103691768uncharacterized LOC10369176831762428617653427Rat
11375987LOC108350353uncharacterized LOC10835035331771249617715730Rat
1305363Mapkap1MAPK associated protein 131771581317918387Rat
6490845Rps7-ps1ribosomal protein S7, pseudogene 131774510017745785Rat
1307479Gapvd1GTPase activating protein and VPS9 domains 131796834518041888Rat
2843Hspa5heat shock protein family A (Hsp70) member 531805550718059969Rat
1310612RabepkRab9 effector protein with kelch motifs31806129918083191Rat
1310460Fbxw2F-box and WD repeat domain containing 231808885918114387Rat
9424697B3galt9beta-1,3-galactosyltransferase 931812162018124149Rat
1308434Psmd5proteasome 26S subunit, non-ATPase 531813371518151000Rat
1564854CutalcutA divalent cation tolerance homolog-like31815430018174957Rat
1310390Phf19PHD finger protein 1931817528118197289Rat
41148686Rnu6-1256RNA, U6 small nuclear 125631819866018198758Rat
1596290Traf1TNF receptor-associated factor 131822202418242163Rat
2237C5complement C531827069618361994Rat
1308742C5l1complement C5 like 131840171618420064Rat
1305317Cntrlcentriolin31842814718500362Rat
620881Rab14RAB14, member RAS oncogene family31850195318523253Rat
7626419LOC102554040uncharacterized LOC10255404031854880318551679Rat
1303089Gsngelsolin31858516618638404Rat
1305109Stomstomatin31864505818667343Rat
11415833Rps29-ps18ribosomal protein S29, pseudogene 1831865282818653581Rat
1565200Ggta1l1glycoprotein, alpha-galactosyltransferase 1-like 131868467618701674Rat
7519388LOC102548933uncharacterized LOC10254893331868483718704251Rat
41302246LOC120101528spermidine synthase-like31870954818710782Rat
15600294930402F06RiklRIKEN cDNA 4930402F06 gene like31871144718729464Rat
629476Ggta1glycoprotein alpha-galactosyltransferase 131873298518824916Rat
41223777LOC120101529uncharacterized LOC12010152931880970818826377Rat
41235057LOC120101530uncharacterized LOC12010153031883080318840164Rat
7519941LOC102549213uncharacterized LOC10254921331885924518864078Rat
41334896LOC120101531uncharacterized LOC12010153131885969018860308Rat
40939483LOC120101532uncharacterized LOC12010153231886873618875078Rat
1564343Rps16-ps8ribosomal protein S16, pseudogene 831889902818899541Rat
41255400LOC120101533uncharacterized LOC12010153331890657418915565Rat
621686Dab2ipDAB2 interacting protein31891529019086282Rat
1588742Ttll11tubulin tyrosine ligase like 1131910989119335077Rat
41317518LOC120101534uncharacterized LOC12010153431924467019265072Rat
11412302LOC108350358uncharacterized LOC10835035831936841019371814Rat
40930499LOC120101535uncharacterized LOC12010153531937116119375704Rat
1306283Ndufa8NADH:ubiquinone oxidoreductase subunit A831938606219402090Rat
1307739Morn5MORN repeat containing 531940222119430075Rat
1306174Lhx6LIM homeobox 631943243919456268Rat
1307411Rbm18RNA binding motif protein 1831946733319487171Rat
1305897Mrrfmitochondrial ribosome recycling factor31948712419543911Rat
41328151LOC120101536uncharacterized LOC12010153631956929119569873Rat
3439Ptgs1prostaglandin-endoperoxide synthase 131958401519605589Rat
1561766Btf3-ps8basic transcription factor 3, pseudogene 831962091619621457Rat
1332877Or1u2-ps1olfactory receptor family 1 subfamily U member 2, pseudogene 131964110519641968Rat
1334061Or1j8-ps1olfactory receptor family 1 subfamily J member 8, pseudogene 131966717919668113Rat
1332916Or1j13bolfactory receptor family 1 subfamily J member 13B31971224219713180Rat
1333442Or1j8bolfactory receptor family 1 subfamily J member 8B31976523019766168Rat
1589699Klf5-ps1Kruppel-like factor 5, pseudogene 131978734019790302Rat
1334157Or1j16bolfactory receptor family 1 subfamily J member 16B31980352919806493Rat
1333097Or1j22olfactory receptor family 1 subfamily J member 2231983877119839700Rat
1333418Or1j10olfactory receptor family 1 subfamily J member 1031987183619872759Rat
1333084Or1j15bolfactory receptor family 1 subfamily J member 15B31991073819911667Rat
1333467Or1j13olfactory receptor family 1 subfamily J member 1331994606319947001Rat
1333900Or1j14olfactory receptor family 1 subfamily J member 1432004046220041400Rat
1332955Or1j15olfactory receptor family 1 subfamily J member 1532006734920068272Rat
1334217Or1j16olfactory receptor family 1 subfamily J member 1632014515820146096Rat
1334184Or1j24-ps1olfactory receptor family 1 subfamily J member 24, pseudogene 132019140520192325Rat
1333812Or1j12bolfactory receptor family 1 subfamily J member 12B32021130520212240Rat
1332629Or1j12olfactory receptor family 1 subfamily J member 1232026967820270616Rat
1333536Or1j13colfactory receptor family 1 subfamily J member 13C32031516220316100Rat
1333882Or1j19olfactory receptor family 1 subfamily J member 1932033968420340625Rat
1333914Or1j21olfactory receptor family 1 subfamily J member 2132034653520352728Rat
1332682Or1j1olfactory receptor family 1 subfamily J member 132038357720384518Rat
1333868Or1v2-ps1olfactory receptor family 1 subfamily V member 2, pseudogene 132039800520398768Rat
1333082Or1j4olfactory receptor family 1 subfamily J member 432040964120410579Rat
621629Or1n1olfactory receptor family 1 subfamily N member 132041326220414197Rat
1333209Or1j20olfactory receptor family 1 subfamily J member 2032042412520425072Rat
1334305Or1n1bolfactory receptor family 1 subfamily N member 1B32044460420445539Rat
1333103Or1n2olfactory receptor family 1 subfamily N member 232045646420457417Rat
1333496Or1l8olfactory receptor family 1 subfamily L member 832047236220473294Rat
1334437Or1ak2olfactory receptor family 1 subfamily AK member 232048392120484868Rat
41347654LOC120102126U4 spliceosomal RNA32050396520504098Rat
1333656Or1q1olfactory receptor family 1 subfamily Q member 132050699520507921Rat
1333411Or12k5olfactory receptor family 12 subfamily K member 532051768220518674Rat
1332758Or12k7bolfactory receptor family 12 subfamily K member 7B32055178820552741Rat
1334389Or12k7olfactory receptor family 12 subfamily K member 732060688720607873Rat
1333742Or12k8olfactory receptor family 12 subfamily K member 832062253120623523Rat
1333333Or1b1olfactory receptor family 1 subfamily B member 132063997620640929Rat
1332825Or1l4bolfactory receptor family 1 subfamily L member 4B32069926620700189Rat
1332944Or1l4olfactory receptor family 1 subfamily L member 432076712920768064Rat
1333332Or1af1olfactory receptor family 1 subfamily AF member 132078454520785474Rat
41129592LOC120101432olfactory receptor 1G1-like32080765020808705Rat
1334355Olr431-psolfactory receptor pseudogene 43132081191620812126Rat
1584028Or7c74olfactory receptor family 7 subfamily C member 7432083661620837548Rat
1332729Olr433-psolfactory receptor pseudogene 43332084156320841791Rat
1333139Or5c1olfactory receptor family 5 subfamily C member 132086229720863280Rat
1584015Pdcl1-ps1phosducin-like 1, pseudogene 132087269120881151Rat
1589698Nme2-ps6NME/NM23 nucleoside diphosphate kinase 2, pseudogene 632088106320883655Rat
1588379Rrs1-ps10ribosome biogenesis regulator 1 homolog, pseudogene 1032093932120942374Rat
41003160Elob-ps11elongin B, pseudogene 1132098648820987742Rat
41209010Elob-ps7elongin B, pseudogene 732099050420992516Rat
1582869Elob-ps14elongin B, pseudogene 1432099505620995790Rat
41266536Elob-ps3elongin B, pseudogene 332100233621003559Rat
1590958LOC690876similar to transcription elongation factor B (SIII), polypeptide 232100647021007502Rat
1588382Elob-ps8elongin B, pseudogene 832101726421018340Rat
41101549Elob-ps13elongin B, pseudogene 1332102182521022305Rat
40987625Elob-ps15elongin B, pseudogene 1532102519421026182Rat
41185658Elob-ps5elongin B, pseudogene 532102914221030159Rat
6493667Dlg5l2discs large MAGUK scaffold protein 5 like 232106224721072153Rat
1591934Klf5-ps2Kruppel-like factor 5, pseudogene 232107191521073656Rat
1582840Rrs1-ps1ribosome biogenesis regulator 1 homolog, pseudogene 132108898921090611Rat
41001645LOC120101901uncharacterized LOC12010190132109599121099779Rat
621135Pdclphosducin like32111016521119763Rat
7654995Nme2-ps2NME/NM23 nucleoside diphosphate kinase 2, pseudogene 232111942321122807Rat
1304833Rc3h2ring finger and CCCH-type domains 232112153121186711Rat
41133334Snord90small nucleolar RNA, C/D box 9032116296821163078Rat
41083260Zbtb6l1zinc finger and BTB domain containing 6 like 132118503821192945Rat
1306007Zbtb6zinc finger and BTB domain containing 632118916021207561Rat
1308561Zbtb26zinc finger and BTB domain containing 2632119531921207925Rat
11425388LOC108350365uncharacterized LOC10835036532119941021205009Rat
1304691Rabgap1RAB GTPase activating protein 132120801221326013Rat
1586383Gpr21G protein-coupled receptor 2132127528921279008Rat
620673Strbpspermatid perinuclear RNA binding protein32132831021467753Rat
41374491U4l1U4 spliceosomal RNA like 132142035421420481Rat
1561137Rps16l1ribosomal protein S16 like 132149415521494684Rat
41026169LOC120101537uncharacterized LOC12010153732152771321534482Rat
41016805LOC120101903uncharacterized LOC12010190332154038321543108Rat
1309368Crb2crumbs cell polarity complex component 232154213821564876Rat
41337030LOC120101933U6 spliceosomal RNA32155103821551144Rat
40941630LOC120101945U6 spliceosomal RNA32155175421551860Rat
1307927Dennd1aDENN domain containing 1A32156474922052057Rat
71076Lhx2LIM homeobox 232211361922143909Rat
11473570Dpf3l1double PHD fingers 3 like 132221469422257038Rat
40939602LOC120101538uncharacterized LOC12010153832224525122257178Rat
727779Nek6NIMA-related kinase 632228426922356302Rat
621093Psmb7proteasome 20S subunit beta 732235777722417748Rat
1596103Alg11-ps3ALG11, alpha-1,2-mannosyltransferase, pseudogene 332242836922429945Rat
2318734Rps20-ps10ribosomal protein S20, pseudogene 1032243025822430776Rat
68350Nr5a1nuclear receptor subfamily 5, group A, member 132246478622486328Rat
1564740Nr6a1nuclear receptor subfamily 6, group A, member 132249510922683132Rat
2325335Mir181a2microRNA 181a-232261584522615961Rat
2325454Mir181b2microRNA 181b-232261694822617035Rat
41296457LOC120101539uncharacterized LOC12010153932261895022632367Rat
1311651Olfml2aolfactomedin-like 2A32268859022717917Rat
7749459Golga2l2golgin A2 like 232271624422731175Rat
41157828LOC120102092small nucleolar RNA SNORA7932273807222738216Rat
1562587Wdr38WD repeat domain 3832275015022753260Rat
1303007Rpl35ribosomal protein L3532275325522756217Rat
1308867Arpc5lactin related protein 2/3 complex, subunit 5-like32275871022767520Rat
1311305Golga1golgin A132276569022812637Rat
7707315Scail1suppressor of cancer cell invasion like 132281271922819111Rat
1594720Scaisuppressor of cancer cell invasion32281328322925337Rat
708460Ppp6cprotein phosphatase 6, catalytic subunit32292981622962123Rat
1589697Rpl10-ps2ribosomal protein L10, pseudogene 232303352923034161Rat
41241606LOC120102026small nucleolar RNA SNORA4832304743523047574Rat
7741314N4bp1-ps1Nedd4 binding protein 1, pseudogene 132315047223151651Rat
1589739Vdac2-ps3voltage-dependent anion channel 2, pseudogene 332321552623222603Rat
2323145Sp3-ps1Sp3 transcription factor, pseudogene 132360318123604872Rat
41256826LOC120101994U7 small nuclear RNA32362397123624033Rat
40992520LOC120101997U7 small nuclear RNA32362404923624108Rat
9093487LOC10369180540S ribosomal protein S14 pseudogene32371140923711911Rat
41337682LOC120102038small nucleolar RNA SNORA4832392516823925311Rat
2318320LOC10036236640S ribosomal protein S17-like32401982024020305Rat
11496785LOC10835055160S ribosomal protein L12 pseudogene32424981424250522Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10260D3Rat5215631831145418311610Ratregion
10344D3Wox1212531188471211884828Ratregion
34252D3Mgh1913231922714719227279Ratregion
34347D3Mgh1611931077870410778823Ratregion
34457D3Mgh1714031054935110549499Ratregion
36167D3Rat5012232071409020714212Ratregion
36195D3Rat5115032146466021464822Ratregion
36354D3Mit2221031916237119162581Ratregion
36657D3Rat5814531500542215005567Ratregion
35054D3Rat5513831493762114937759Ratregion
35609D3Rat5318031737470317374883Ratregion
35617D3Rat5416831448914514489218Ratregion
35617D3Rat5416831448914514489306Ratregion
38506D3Rat9619231487214914872341Ratregion
39072D3Rat12420031533793115338131Ratregion
39214D3Rat13117432143858421438758Ratregion
41476D3Rat19315731424056014240717Ratregion
42636D3Rat28010631201661412016720Ratregion
42638D3Rat23222331452936514529588Ratregion
42639D3Rat23121131415870514158916Ratregion
42640D3Rat22922632006830720068533Ratregion
42641D3Rat27821631909133519091551Ratregion
42642D3Rat27614432285809622858240Ratregion
40854D3Rat19235731774916217749521Ratregion
40912D3Rat19124932134384121344079Ratregion
40968D3Rat19419931452938114529570Ratregion
41720D3Rat23019231957096319571155Ratregion
43611D3Got1121531687564716875862Ratregion
43613D3Got225631595255515952811Ratregion
43613D3Got225631595255515952876Ratregion
43614D3Got525231381369413813944Ratregion
43616D3Got913231696220116962333Ratregion
43618D3Got1012131741247617412594Ratregion
43620D3Got1720432213140522131609Ratregion
43622D3Got1424631925981119260057Ratregion
43623D3Got1511931934566519345784Ratregion
43624D3Got1622431966389619664120Ratregion
43625D3Got713231940719319407325Ratregion
43626D3Got817731916237919162556Ratregion
60385D3Got17521932419245524192674Ratregion
60388D3Got2026032354297723543237Ratregion
60395D3Got413631116773411167870Ratregion
69714D3Kyo214531524679615246941Ratregion
625799D3Got1322432118841821188642Ratregion
66452D3Mco1820031740031017400510Ratregion
66504D3Mco3020031370836213708392Ratregion
66504D3Mco3020031370836213708597Ratregion
728000D3Chm4223931419779214198031Ratregion
728000D3Chm4223931478220014782438Ratregion
728005D3Chm4017431418970114189875Ratregion
728012D3Chm1522331740644217406665Ratregion
728023D3Chm4317331419918514199358Ratregion
728027D3Chm4117331419004514190218Ratregion
728028D3Chm722731760028217600509Ratregion
728038D3Chm619131740552217405713Ratregion
67265D3Arb414231105160011051742Ratregion
67266D3Arb521031673546416735674Ratregion
1628792D3Got28315431342620813426362Ratregion
1629333D3Cebr219931464713514647334Ratregion
1629869D3Got28914031115478511154925Ratregion
1638736D3Wox3914831348281013482958Ratregion
1638743D3Got29426931490447214904741Ratregion
1640270D3Got20216431667844616678612Ratregion
1640611D3Cebr721131827815818278369Ratregion
1636230D3Got26027431120253211202806Ratregion
1632473D3Got20312932229065622290785Ratregion
1634531D3Got2729232109399621094088Ratregion
7192563BI27475918131590722115907402Ratregion
5035781PMC169877P153132360318923603720Ratregion
5035791PMC18172P152331199170311992226Ratregion
5038686C7946712131581036215810466Ratregion
5036123UniSTS:14138214731380396813804115Ratregion
5036213D2Wsu141e20931805968618059895Ratregion
7206256Olfm18431154037411540458Ratregion
7206554UniSTS:54704592531570894015709865Ratregion
5036233RH12584824531775201517752260Ratregion
5036533Umpk24131554272615542967Ratregion
5039004RH12745721531588486515885080Ratregion
5036601AU04856217332278811222788285Ratregion
5031330PMC140651P112132248000522480126Ratregion
7205786A004H18100031491302514914025Ratregion
5031476AU04819716631375462813754794Ratregion
5026124RH13100418631315573213155918Ratregion
5026146RH13109018031946893819469118Ratregion
5031580AU04785427631110330111103577Ratregion
5031582AU04784820231098411410984316Ratregion
5034291RH14208820231432515014325352Ratregion
5028957RH14296811332120683721206950Ratregion
5028979RH14305228732250470222504984Ratregion
5029085RH14346214831835764618357794Ratregion
5029097RH14351228332276767122767954Ratregion
5026658RH13304520831431068214310890Ratregion
5026714RH13325219331225850412258697Ratregion
5029389RH14460615231890659718906749Ratregion
5032038AU02866418831501153115011721Ratregion
5034672BF39095521931631751616317735Ratregion
5034674BF39099218031329699113297171Ratregion
5032245AI84717510231058471810584820Ratregion
5032341AI85286712732276731522767442Ratregion
5027008RH13437821531367403713674252Ratregion
5029701AW52342115631373575813735914Ratregion
5035430BM38692815031584316115843311Ratregion
5027219AI3262338531607802616078111Ratregion
5032617RH13466621331998404219984255Ratregion
5034874AI0137389531525358115253676Ratregion
5029909BE09768215631954882919548985Ratregion
5029963BF38826316631806103018061196Ratregion
5030267BE09974315332119540121195554Ratregion
5030273BE10514816431947601819476182Ratregion
5025184RH12733919031938614919386339Ratregion
5025224RH12749120531604620816046413Ratregion
5033329RH13843715632156459021564746Ratregion
5025340RH12794221031864442318644633Ratregion
8663472rs106373454031897522018975220Ratregion
5025578RH12886521031703408417034294Ratregion
5028075U3701719431058648410586678Ratregion
5028224D2Mit3729931945245419452553Ratregion
5030875BF39907316131433745714337618Ratregion
5033671RH13968120431815050818150712Ratregion
5025672RH12921719231051059710510789Ratregion
5025736RH12946220931051061110510820Ratregion
5028362WI-2065725031221704512217295Ratregion
5028392D7826412131155732811557449Ratregion
5028394D4590310531607694316077048Ratregion
5025902RH13014020531179724011797445Ratregion
5025928RH13023418631960538719605573Ratregion
5028531AA95976816431380421913804383Ratregion
5031149BE11638815531898651018986665Ratregion
5054901RH14349014831628453516284683Ratregion
5051122RH13445218431622435716224541Ratregion
5051328AW1076499532276848422768579Ratregion
5056445RH14438210331608088716080990Ratregion
5054319RH14315620731180913711809344Ratregion
5057846BF38624916631526118815261354Ratregion
5054949RH14351913531771658517716720Ratregion
5058756BF38704616531497152414971689Ratregion
5058852BF38716020231067332510673527Ratregion
5059610BE09743116831424521314245381Ratregion
5059640BE09750219531509268015092875Ratregion
5056443RH14438113132232964922330836Ratregion
5056861RH14462316331607244016072603Ratregion
5052410C8632212232134157621341698Ratregion
5058102BI27755315131411034314110494Ratregion
5058116BF38661716931624953316249702Ratregion
5052659RH14219117531585843615858611Ratregion
5058892BI27817111431345179413451908Ratregion
5059824BE09799415531054140710541561Ratregion
5055795RH14400711831522700515227123Ratregion
5055813RH14401710931768489017684999Ratregion
5058278BF38693516232280413522804297Ratregion
5058316AI07091118431374313413743318Ratregion
5059092BF38745618331410787014108052Ratregion
5050284RH13396720631767253817672744Ratregion
5057694BF38602118431574403415744218Ratregion
5057718BF38607618031560806515608245Ratregion
5057774BF38617216931299498812995157Ratregion
5050556RH13412419032132692821327118Ratregion
7193056C8632224032134148621341726Ratregion
5050176RH13390519631077542510775621Ratregion
5050356RH13400920131361694313617144Ratregion
5051206RH13450018331330580013305983Ratregion
5051240RH13452018931302354013023729Ratregion
5051326AW26036312331654769916547822Ratregion
5051330AI85251312232132850821328630Ratregion
5054251RH14311723331823621918236452Ratregion
5054513RH14326811531194030411940419Ratregion
5050608RH13415421131197398911974200Ratregion
5050714RH13421620231323397513234177Ratregion
5054663RH14335314431590360215903746Ratregion
5051066RH13442018531345132313451508Ratregion
5044150RH13043818331240875512408938Ratregion
5044398RH13058019331813380318133996Ratregion
5044614RH13070520731201544412015651Ratregion
5041140RH12868520031551794615518971Ratregion
5043608RH13012218731553864715538834Ratregion
5045040RH13094819631492210714922303Ratregion
5045588RH13126421431043426010434474Ratregion
5041384RH12882618531557471815574903Ratregion
5044176RH13045321631791708617917302Ratregion
5046024RH13151519431832607018326264Ratregion
5041640RH12897318631628880616288992Ratregion
5041818RH12907619031449741914497609Ratregion
5041908RH12912818631417788714178073Ratregion
5044838RH13083219631178975011789946Ratregion
5048772RH13309622031574730015747520Ratregion
5046302RH13167420931553822915538438Ratregion
5044554RH13067019732293717822937375Ratregion
5046596RH13184418131201829512018477Ratregion
5047446RH13233218031424885914249039Ratregion
5045058RH13095918631043608910436275Ratregion
5047582RH13241020532246492922465134Ratregion
5047606RH13242419232281345022813642Ratregion
5048834RH13313386631522516415226030Ratregion
5048914RH13317918131223726612237447Ratregion
5048966RH13320919931330613613306335Ratregion
5048968RH13321021431473808214738296Ratregion
5045798RH13138518631796961417969800Ratregion
5045818RH13139619031430978414309974Ratregion
5046218RH13162618231306860013068782Ratregion
5047750RH13250719131840877918408970Ratregion
5047862RH13257121231308763613087848Ratregion
5049130RH13330318431585850315858687Ratregion
5046722RH13191720931622861016228819Ratregion
5047904RH13259618131521223915212420Ratregion
5047942RH13261821731569734515697562Ratregion
5049462RH13349518231351008313510265Ratregion
5047014RH13208518031457130014571480Ratregion
5048218RH13277632031188536611885686Ratregion
5048318RH13283419731864514218645339Ratregion
5049328RH13341719631597239515972591Ratregion
5049802RH13369020131806272718062928Ratregion
5042064RH12921819032292929122929481Ratregion
5047276RH13223419031608212116082311Ratregion
5047286RH13224019231810742918107621Ratregion
5048376RH13286820431490356514903769Ratregion
5048408RH13288615031852636918526519Ratregion
5048474RH13292421831607083416071052Ratregion
5039848RH12794118331372008813720271Ratregion
5040222RH12815918131508267015082851Ratregion
5039598RH12779719431873318318733377Ratregion
5042040RH12920420631280294712803153Ratregion
5042110RH12924621631599655715996773Ratregion
5040392RH12825718331863818118638364Ratregion
5040566RH12835718531560398415604169Ratregion
5039714RH12786521032134167921341889Ratregion
5040692RH12842921631416818814168404Ratregion
5043350RH12997618332292945922929642Ratregion
5043384RH12999519131627497016275161Ratregion
5040118RH12809920331135504911355252Ratregion
5042774RH12963818331674463316745927Ratregion
5042778RH12964018331361607313616256Ratregion
5042848RH12968120431301597113016175Ratregion
5041044RH12863122031535603015356250Ratregion
5041156RH12869418531449571214495897Ratregion
5043856RH13026721131426430114264512Ratregion
5043912RH13030018831353677913536967Ratregion
5040578RH12836420032132567221325872Ratregion
5041590RH12894418031551713515517315Ratregion
5072800RH13706018131180596911806150Ratregion
5072044RH13543220131924819119248392Ratregion
5074142RH13784613131443764414437775Ratregion
5074284RH13792712731718993217190059Ratregion
5076176RH13902316432120683821207002Ratregion
5074562RH13808813031801663218016762Ratregion
5076684RH13931813231250816812508300Ratregion
5076790RH13938015031567354915673699Ratregion
5076866RH13942416931608212116082290Ratregion
5080584RH14166420431605293016053134Ratregion
5077218RH13963037131133663111337002Ratregion
5076178RH13902413331960487419605007Ratregion
5075632RH13870622731603642316036650Ratregion
5075672RH13873012631554207815542204Ratregion
5079664RH14113219731539855415398751Ratregion
5077904RH14002721931077349410773713Ratregion
5078406RH14032314431737881017378954Ratregion
5077888RH14001818932292929622929485Ratregion
5080080RH14137121832235592522356143Ratregion
5080142RH14140818731085626810856455Ratregion
5078404RH14032214531911030719110452Ratregion
5078450RH14035015631933300619333162Ratregion
5079152RH14076517831551280815512986Ratregion
5070554RH13456821431380396713804181Ratregion
5070592RH13459018431622394416224128Ratregion
5070774RH13469818631597287915973065Ratregion
5071122RH13489919832262920122629399Ratregion
5078870RH14059918132118943621189617Ratregion
5070766RH13469221831336325613363474Ratregion
5071654RH13520765131430362114304272Ratregion
5070976RH13481520431417812414178328Ratregion
5073168RH13727921032087268820872898Ratregion
5073280RH13734519031405504214055232Ratregion
5073382RH13740421331809822518098438Ratregion
5073392RH13741019731333708513337282Ratregion
5074364RH13797419031724312417243314Ratregion
5071264RH13498220731808702018087227Ratregion
5071498RH13511719331050489410505087Ratregion
5071550RH13514718031304926813049448Ratregion
5073604RH13753212031309298213093102Ratregion
5072426RH13684280331077599810776801Ratregion
5072444RH13685319531850985318510048Ratregion
5061790AW53353619731562350315623700Ratregion
5064994BE10886415032116939021169540Ratregion
5067062AU04798827931230817512308454Ratregion
5067244AU04787328331377967913779962Ratregion
8693333rs1345583731043430610434306Ratregion
8693334rs106929875032451200424512004Ratregion
5068146AU04732024031102737311027613Ratregion
5070071RH9445619731479668814796885Ratregion
5070099RH9447215831805971818059876Ratregion
5069030AU04677124132240318822403429Ratregion
5069140AU04669919331529365215293845Ratregion
5069148AU04669215731821944818219605Ratregion
5070434AI59152911131791804117918152Ratregion
5069268AU04660824832257916722579243Ratregion
5060328AW53146920231456866314568865Ratregion
5063762AW53510715431695497116955125Ratregion
5060484BE11020315631278740212787558Ratregion
5060500BE11023316231806137218061534Ratregion
5062342BF40312218531424519614245381Ratregion
5063848BE12005115031224135112241501Ratregion
5063956BE12031515131810266018102811Ratregion
5065662BF40616117031240178012401950Ratregion
5060912AI07328517031592164515921815Ratregion
5060942BE10489915531938463019384785Ratregion
5064320BE11440315931959569519595854Ratregion
5060330AW53147719831717902617179224Ratregion
5061842AW53384018031881100318811183Ratregion
5065450BE11551121331532060015320813Ratregion
5062534BF4033709031511027715110367Ratregion
5064178BE12072315031547643415476584Ratregion
5064570BE10812815031912737819127528Ratregion
5063038BE10703215731497301714973174Ratregion
5061432BE10515715431584701015847164Ratregion
5061560BE10544619031431567314315863Ratregion
5086851AI00832313231567464515674777Ratregion
5086865BQ20597417331950578219505955Ratregion
5087002AI22919719931565283315653032Ratregion
5082151BI28002814931890659718906746Ratregion
5082439BI27475921031590716115907371Ratregion
5082597BE11981420531350449713504702Ratregion
5082599BE11983615531223819312238348Ratregion
5087797D2Wsu17e20531805965818059863Ratregion
5087905Hspa513331805967218059805Ratregion
5089789AU04936419131814751818147709Ratregion
5083031BF39069815131933523819335389Ratregion
5083307BF41758318131307884313079024Ratregion
5088279AU04847513431432796814328102Ratregion
5088317AU04849739231418049314180885Ratregion
5088455AU04858015032224537522245525Ratregion
5089717AU04932114731687774416877891Ratregion
5084032AI01161511731336358213363699Ratregion
5081667BE11791915532134748221347637Ratregion
5090291AU04966413631922715719227293Ratregion
5081981BE11897619931214426312144462Ratregion
5090889AW74256824631155734611557592Ratregion
5080820RH14180121131626878016268991Ratregion
5090517AU04979820031868799918688199Ratregion
5090597AU04984710731418483914184946Ratregion
5081104RH14196722031724146017241680Ratregion
5085415AA94294914131311686213117003Ratregion
5085515AA94386615131336974313369894Ratregion
5085582AA94468916232142287321423035Ratregion
5089061AU04893118531851221418512399Ratregion
5082537BE11965915031524044615240596Ratregion
5086046AI10233116331180507911805242Ratregion
5081002RH14190719131304676813046959Ratregion
5084656AA94650335931568156215681921Ratregion
5082799BF39012815931933621519336374Ratregion
5086293BQ20545020731120507511205282Ratregion
5086325AA99784310431588184815881952Ratregion
5081126RH14198018732164935121649538Ratregion
5086743AA81918019631654777116547967Ratregion
5086758Stxbp124531607759916077844Ratregion
5086809BM38676922031349126113491481Ratregion
5081763BE11809618231488801314888195Ratregion
5085722BQ20338018831843735618437544Ratregion
5503222UniSTS:23723717031978843219788601Ratregion
5503591UniSTS:46468411832246607822466196Ratregion
5504145UniSTS:25918053431805617118056705Ratregion
5504044px-43d224632447248124472727Ratregion
5504400PMC18813P221131216739812167609Ratregion
5504930Zik112331867235918672482Ratregion
5505374Cdk9167531599650315998178Ratregion
5505598UniSTS:48513094832048392020484868Ratregion
5505694UniSTS:48939595432055178720552741Ratregion
5506131UniSTS:4984326631861305518613121Ratregion
5506199Tor1a36831425070714251075Ratregion
5506539HSPA5_98879631805908418059880Ratregion
5506260D6S451168932221208922213778Ratregion
5506688REN3601322931374304213743271Ratregion
5506821G4613020231661423916614441Ratregion
5506690REN3600727431374436113744635Ratregion
5506692REN3600823231374415413744386Ratregion
5506694REN3600525931374508513745344Ratregion
5506696REN3600922531374395113744176Ratregion
5506700REN3614225131371372013713971Ratregion
5506702REN3634221531366565013665865Ratregion
5507105UniSTS:22456122031236667112366891Ratregion
5507053UniSTS:22426818631297226112972447Ratregion
5499725UniSTS:23434721431079189110792105Ratregion
5499727UniSTS:23436418231301537913015561Ratregion
5499733UniSTS:23436924931509268115092930Ratregion
5499735UniSTS:23438515632293100022931156Ratregion
5499731UniSTS:23436512431416829214168416Ratregion
5499587At-9B-134114132445043524451577Ratregion
5503122GOLGA1-197632280041922801395Ratregion
5500831G0709310731748921117489318Ratregion
5500625RH13634021131479660614796816Ratregion
5503422DXS808798631159508111596068Ratregion
5501341ECD2189623731374415413744391Ratregion
5501343ECD2205923231374361113743843Ratregion
5501746MARC_10305-10306:998934185:198132284629922847280Ratregion
5501920MARC_17455-17456:1028295191:167831359033113591009Ratregion
5505540D2S171152732229830222299679Ratregion
5502503RH125103031365519713656373Ratregion
5502485RH12506119531372007813720273Ratregion
5502271RH12423715431345126613451420Ratregion
5502567RH12536827331805916418059437Ratregion
11528616rs10698495631754241117542411Ratregion
11528617rs10675850031649064816490648Ratregion
11528618rs10698764431924168119241681Ratregion
Position Markers

Flank 1: (rs13455837)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2310,434,306 - 10,434,306RGD
Rnor_6.035,654,639 - 5,654,639RGD
Celera35,232,566 - 5,232,566RGD
Peak: (rs106373454)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2318,975,220 - 18,975,220RGD
Rnor_6.0314,949,180 - 14,949,180RGD
Celera313,687,495 - 13,687,495RGD
Flank 2: (rs106929875)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2324,512,004 - 24,512,004RGD
Rnor_6.0325,105,730 - 25,105,730RGD
Celera322,905,792 - 22,905,792RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1358357Srcrtb1Stress Responsive Cort Basal QTL 16.360.002blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)3865816227494778Rat
6893355Bw101Body weight QTL 1010.40.38body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
11528620Bss113Bone structure and strength QTL 1139.752e-10femur morphology trait (VT:0000559)femoral neck width (CMO:0001695)31649064819241681Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)body weight (CMO:0000012)31737470335528639Rat
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3822719447233430Rat
1298526Arunc3Aerobic running capacity QTL 32.2exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)3822719433703538Rat
8693641Alc30Alcohol consumption QTL 3020.739drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)31043430624512004Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)31500542276927699Rat
1558657Cm43Cardiac mass QTL 436.63e-08heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
631568Bp92Blood pressure QTL 922.20.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3139874793Rat
6893363Bw105Body weight QTL 1052.60.0036body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
61468Bp15Blood pressure QTL 154.4blood pressure trait (VT:0000183)pulse pressure (CMO:0000292)3133278763Rat
631831Alc8Alcohol consumption QTL 82.7consumption behavior trait (VT:0002069)calculated ethanol drink intake rate (CMO:0001615)3133230976Rat
1558647Cm46Cardiac mass QTL 465.40.0000055heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)3136847613Rat
10450811Scl73Serum cholesterol level QTL 734.70.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32419245527494778Rat
2292615Ept17Estrogen-induced pituitary tumorigenesis QTL 176.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)3653764510778823Rat
10450808Scl72Serum cholesterol level QTL 724.40.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32419245527494778Rat
12879852Cm93Cardiac mass QTL 930.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)31831145447233430Rat
1558654Bw56Body weight QTL 564.50.0000171body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
12879853Am5Aortic mass QTL 50.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)31831145447233430Rat
10450806Scl71Serum cholesterol level QTL 715.80.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32419245527494778Rat
12879854Kidm63Kidney mass QTL 630.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)31831145447233430Rat
10450804Scl70Serum cholesterol level QTL 704.70.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32071409065714090Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)31077882330356773Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)31086191289878372Rat
12879849Bw180Body weight QTL 1800.037body mass (VT:0001259)body weight (CMO:0000012)31831145447233430Rat
70191BpQTLcluster4Blood pressure QTL cluster 43arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)31077870450302886Rat
12879850Cm91Cardiac mass QTL 910.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)31831145447233430Rat
731172Bp151Blood pressure QTL 1510.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31831145447233430Rat
12879851Cm92Cardiac mass QTL 920.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)31831145447233430Rat
631545Bp85Blood pressure QTL 853.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3133278763Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
2325840Bp345Blood pressure QTL 3450.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31831145428441896Rat
631676Cm8Cardiac mass QTL 87.030.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)31695470861954708Rat
10450794Scl69Serum cholesterol level QTL 696.30.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32071409065714090Rat
631679Cm10Cardiac mass QTL 107.340.0001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3131158234Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)3191609953Rat
70203Gcr2Gastric cancer resistance QTL 22.6stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)3865816227494778Rat
70202Alc19Alcohol consumption QTL 192.5drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)3127494778Rat
2312664Scl62Serum cholesterol level QTL 620.05blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)3138710544Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
1358185Ept6Estrogen-induced pituitary tumorigenesis QTL 66.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)3653764510778823Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general spans 10.3-30.3 Mb 8663441
qtl_general number of animals used: 70-100 days old males from HXB/BXH RI strains and the parental BN-Lx/CubPrin, SHR/OlaIpcvPrin 8663441
qtl_general software used: ANOVA 8663441
qtl_general this QTL correlates to week 7 pre-ADE alcohol consumption 8663441
qtl_general alcohol deprivation effect (ADE) was calculated as the amount of alcohol consumed (g/kg) during 24 hrs after deprivation minus average daily amount consumed in the week before deprivation period 8663441
qtl_general water and alcohol consumption were measured by weight 8663441
qtl_general measurement method: rats were given 10% EtOH for 1 week, then for 7 weeks they were given 2-bottle choice of water and EtOH followed by 2 week period of only water (alcohol deprivation); then 2 weeks of 2-bottle choice of water and EtOH followed by second 2 weeks of alcohol deprivation then 2 weeks of 2-bottle choice of water and EtOH followed by third 2 weeks of alcohol deprivation and 1 week of 2-bottle choice of water and EtOH 8663441