Pals1 (protein associated with LIN7 1, MAGUK p55 family member) - Rat Genome Database

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Gene: Pals1 (protein associated with LIN7 1, MAGUK p55 family member) Rattus norvegicus
Analyze
Symbol: Pals1
Name: protein associated with LIN7 1, MAGUK p55 family member
RGD ID: 1308071
Description: Predicted to enable identical protein binding activity and protein domain specific binding activity. Involved in myelin assembly and protein localization to plasma membrane. Part of protein-containing complex. Orthologous to human PALS1 (protein associated with LIN7 1, MAGUK p55 family member); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC314259; MAGUK p55 subfamily member 5; membrane palmitoylated protein 5; membrane protein, palmitoylated 5; membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5); Mpp5; protein associated with LIN7 1, MAGUK family member
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86103,327,965 - 103,384,543 (+)NCBIGRCr8
mRatBN7.2697,548,133 - 97,654,163 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl697,548,630 - 97,653,305 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx698,031,311 - 98,081,039 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0698,330,473 - 98,380,201 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0697,710,535 - 97,767,135 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06101,923,675 - 102,029,705 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6101,923,785 - 102,028,592 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06111,299,821 - 111,404,519 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46101,414,657 - 101,471,504 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16101,370,971 - 101,477,629 (+)NCBI
Celera695,983,793 - 96,039,503 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Pals1 is a major regulator of the epithelial-like polarization and the extension of the myelin sheath in peripheral nerves. Ozcelik M, etal., J Neurosci. 2010 Mar 17;30(11):4120-31. doi: 10.1523/JNEUROSCI.5185-09.2010.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Par3/Par6 polarity complex coordinates apical ectoplasmic specialization and blood-testis barrier restructuring during spermatogenesis. Wong EW, etal., Proc Natl Acad Sci U S A. 2008 Jul 15;105(28):9657-62. Epub 2008 Jul 10.
Additional References at PubMed
PMID:10753959   PMID:12477932   PMID:15914641   PMID:16885194   PMID:17332497   PMID:19056867   PMID:19506035   PMID:23201090   PMID:23376485   PMID:23533145   PMID:25636444  


Genomics

Comparative Map Data
Pals1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86103,327,965 - 103,384,543 (+)NCBIGRCr8
mRatBN7.2697,548,133 - 97,654,163 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl697,548,630 - 97,653,305 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx698,031,311 - 98,081,039 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0698,330,473 - 98,380,201 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0697,710,535 - 97,767,135 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06101,923,675 - 102,029,705 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6101,923,785 - 102,028,592 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06111,299,821 - 111,404,519 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46101,414,657 - 101,471,504 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16101,370,971 - 101,477,629 (+)NCBI
Celera695,983,793 - 96,039,503 (+)NCBICelera
Cytogenetic Map6q24NCBI
PALS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381467,241,435 - 67,336,061 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1467,240,713 - 67,336,061 (+)EnsemblGRCh38hg38GRCh38
GRCh371467,708,152 - 67,802,778 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361466,777,774 - 66,872,289 (+)NCBINCBI36Build 36hg18NCBI36
Build 341466,777,773 - 66,872,288NCBI
Celera1447,767,078 - 47,861,589 (+)NCBICelera
Cytogenetic Map14q23.3NCBI
HuRef1447,877,875 - 47,972,701 (+)NCBIHuRef
CHM1_11467,646,631 - 67,741,468 (+)NCBICHM1_1
T2T-CHM13v2.01461,448,560 - 61,543,185 (+)NCBIT2T-CHM13v2.0
Pals1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391278,795,606 - 78,887,488 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1278,795,681 - 78,887,488 (+)EnsemblGRCm39 Ensembl
GRCm381278,748,882 - 78,840,714 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1278,748,907 - 78,840,714 (+)EnsemblGRCm38mm10GRCm38
MGSCv371279,849,934 - 79,941,701 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361279,667,864 - 79,756,927 (+)NCBIMGSCv36mm8
Celera1280,213,557 - 80,305,293 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1235.51NCBI
Pals1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554662,874,058 - 2,918,122 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554662,871,445 - 2,937,296 (-)NCBIChiLan1.0ChiLan1.0
PALS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21568,332,567 - 68,441,611 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11467,549,079 - 67,658,119 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01447,814,896 - 47,911,206 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11466,693,863 - 66,790,122 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1466,693,863 - 66,790,122 (+)Ensemblpanpan1.1panPan2
PALS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1841,230,230 - 41,330,017 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl841,275,947 - 41,327,348 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha840,921,970 - 41,021,764 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0841,456,949 - 41,557,356 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl841,482,039 - 41,557,348 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1841,075,824 - 41,176,237 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0841,149,990 - 41,249,790 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0841,508,622 - 41,608,769 (+)NCBIUU_Cfam_GSD_1.0
Pals1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864063,464,311 - 63,554,909 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649510,636,670 - 10,725,647 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649510,636,762 - 10,729,060 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PALS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl790,984,394 - 91,055,620 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1790,955,524 - 91,055,923 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2797,264,802 - 97,365,354 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PALS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12444,483,005 - 44,576,017 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2444,483,199 - 44,573,172 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605332,712,858 - 32,805,769 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pals1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473433,658,975 - 33,721,548 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473433,659,625 - 33,758,680 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pals1
461 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:292
Count of miRNA genes:171
Interacting mature miRNAs:222
Transcripts:ENSRNOT00000012005
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat

Markers in Region
AW535964  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2697,652,671 - 97,652,841 (+)MAPPERmRatBN7.2
Rnor_6.06102,028,218 - 102,028,387NCBIRnor6.0
Rnor_5.06111,403,032 - 111,403,201UniSTSRnor5.0
RGSC_v3.46101,472,686 - 101,472,855UniSTSRGSC3.4
Celera696,040,685 - 96,040,854UniSTS
RH 3.4 Map6689.6UniSTS
Cytogenetic Map6q24UniSTS
BE121443  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2697,652,537 - 97,652,690 (+)MAPPERmRatBN7.2
Rnor_6.06102,028,084 - 102,028,236NCBIRnor6.0
Rnor_5.06111,402,898 - 111,403,050UniSTSRnor5.0
RGSC_v3.46101,472,552 - 101,472,704UniSTSRGSC3.4
Celera696,040,551 - 96,040,703UniSTS
RH 3.4 Map6690.19UniSTS
Cytogenetic Map6q24UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 24 32 17 16 17 6 7 74 35 37 11 6
Low 19 25 24 3 24 2 4 4 2
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000012005   ⟹   ENSRNOP00000012005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl6101,923,785 - 102,028,592 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000092157   ⟹   ENSRNOP00000070368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl697,548,630 - 97,653,305 (+)Ensembl
Rnor_6.0 Ensembl6101,924,000 - 102,026,810 (+)Ensembl
RefSeq Acc Id: NM_001108034   ⟹   NP_001101504
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86103,327,965 - 103,384,543 (+)NCBI
mRatBN7.2697,594,908 - 97,651,490 (+)NCBI
Rnor_6.06101,970,458 - 102,027,036 (+)NCBI
Rnor_5.06111,299,821 - 111,404,519 (+)NCBI
RGSC_v3.46101,414,657 - 101,471,504 (+)RGD
Celera695,983,793 - 96,039,503 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001101504 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI68247 (Get FASTA)   NCBI Sequence Viewer  
  B4F7E7 (Get FASTA)   NCBI Sequence Viewer  
  EDM03700 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000070368.1
  ENSRNOP00055025635
  ENSRNOP00060040112
  ENSRNOP00065024066
RefSeq Acc Id: NP_001101504   ⟸   NM_001108034
- UniProtKB: B4F7E7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000070368   ⟸   ENSRNOT00000092157
RefSeq Acc Id: ENSRNOP00000012005   ⟸   ENSRNOT00000012005
Protein Domains
Guanylate kinase-like   L27   PDZ   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B4F7E7-F1-model_v2 AlphaFold B4F7E7 1-675 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694694
Promoter ID:EPDNEW_R5211
Type:initiation region
Name:Mpp5_1
Description:membrane palmitoylated protein 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.06101,923,740 - 101,923,800EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308071 AgrOrtholog
BioCyc Gene G2FUF-36988 BioCyc
Ensembl Genes ENSRNOG00000008788 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055018627 UniProtKB/Swiss-Prot
  ENSRNOG00060027786 UniProtKB/Swiss-Prot
  ENSRNOG00065018071 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000092157.2 UniProtKB/Swiss-Prot
  ENSRNOT00055031707 UniProtKB/Swiss-Prot
  ENSRNOT00060048195 UniProtKB/Swiss-Prot
  ENSRNOT00065030283 UniProtKB/Swiss-Prot
Gene3D-CATH 2.30.42.10 UniProtKB/Swiss-Prot
  3.40.50.300 UniProtKB/Swiss-Prot
  L27 domain UniProtKB/Swiss-Prot
  SH3 Domains UniProtKB/Swiss-Prot
InterPro GK/Ca_channel_bsu UniProtKB/Swiss-Prot
  Guanylate_kin-like_dom UniProtKB/Swiss-Prot
  Guanylate_kinase_CS UniProtKB/Swiss-Prot
  L27_C UniProtKB/Swiss-Prot
  L27_dom UniProtKB/Swiss-Prot
  L27_dom_sf UniProtKB/Swiss-Prot
  L27_N UniProtKB/Swiss-Prot
  MPP5_SH3 UniProtKB/Swiss-Prot
  P-loop_NTPase UniProtKB/Swiss-Prot
  PDZ UniProtKB/Swiss-Prot
  PDZ_sf UniProtKB/Swiss-Prot
  SH3-like_dom_sf UniProtKB/Swiss-Prot
  SH3_domain UniProtKB/Swiss-Prot
KEGG Report rno:314259 UniProtKB/Swiss-Prot
NCBI Gene 314259 ENTREZGENE
PANTHER MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK UniProtKB/Swiss-Prot
  PROTEIN PALS1 UniProtKB/Swiss-Prot
Pfam Guanylate_kin UniProtKB/Swiss-Prot
  L27 UniProtKB/Swiss-Prot
  L27_N UniProtKB/Swiss-Prot
  PDZ UniProtKB/Swiss-Prot
  SH3_2 UniProtKB/Swiss-Prot
PhenoGen Pals1 PhenoGen
PROSITE GUANYLATE_KINASE_1 UniProtKB/Swiss-Prot
  GUANYLATE_KINASE_2 UniProtKB/Swiss-Prot
  L27 UniProtKB/Swiss-Prot
  PDZ UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000008788 RatGTEx
  ENSRNOG00055018627 RatGTEx
  ENSRNOG00060027786 RatGTEx
  ENSRNOG00065018071 RatGTEx
SMART GuKc UniProtKB/Swiss-Prot
  L27 UniProtKB/Swiss-Prot
  PDZ UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF101288 UniProtKB/Swiss-Prot
  SSF50044 UniProtKB/Swiss-Prot
  SSF50156 UniProtKB/Swiss-Prot
  SSF52540 UniProtKB/Swiss-Prot
UniProt B4F7E7 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-09-23 Pals1  protein associated with LIN7 1, MAGUK p55 family member  Pals1  protein associated with LIN7 1, MAGUK family member  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2021-03-09 Pals1  protein associated with LIN7 1, MAGUK family member  Mpp5  membrane palmitoylated protein 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-04-14 Mpp5  membrane palmitoylated protein 5  Mpp5  membrane protein, palmitoylated 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-11-20 Mpp5  membrane protein, palmitoylated 5  Mpp5  membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Mpp5  membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)   Mpp5_predicted  membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Mpp5_predicted  membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) (predicted)      Symbol and Name status set to approved 70820 APPROVED