Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Gak | Rat | Parkinson's disease | | ISO | GAK (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20711177 | |
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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Gak | Rat | Parkinson's disease | | ISO | GAK (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20711177 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
3. | GAK: a cyclin G associated kinase contains a tensin/auxilin-like domain. | Kanaoka Y, etal., FEBS Lett 1997 Jan 27;402(1):73-80. |
4. | KEGG: Kyoto Encyclopedia of Genes and Genomes | KEGG |
5. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
6. | Electronic Transfer of LocusLink and RefSeq Data | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
7. | GOA pipeline | RGD automated data pipeline |
8. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
9. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:16155256 | PMID:16262722 | PMID:18434600 | PMID:19946888 | PMID:20160091 | PMID:24510904 | PMID:29476059 |
Gak (Rattus norvegicus - Norway rat) |
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GAK (Homo sapiens - human) |
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Gak (Mus musculus - house mouse) |
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Gak (Chinchilla lanigera - long-tailed chinchilla) |
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GAK (Pan paniscus - bonobo/pygmy chimpanzee) |
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GAK (Canis lupus familiaris - dog) |
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Gak (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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GAK (Sus scrofa - pig) |
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GAK (Chlorocebus sabaeus - green monkey) |
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Gak (Heterocephalus glaber - naked mole-rat) |
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Variants in Gak
382 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH131491 |
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GAK__6772 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_031030 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006250583 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250584 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017599389 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039092485 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273665 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273666 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273667 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC106245 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AC117047 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH474079 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
D38560 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000014 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000000064 ⟹ ENSRNOP00000000064 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000061720 ⟹ ENSRNOP00000058432 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000105303 ⟹ ENSRNOP00000081704 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000114393 ⟹ ENSRNOP00000081239 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_031030 ⟹ NP_112292 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250583 ⟹ XP_006250645 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250584 ⟹ XP_006250646 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017599389 ⟹ XP_017454878 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039092485 ⟹ XP_038948413 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063273665 ⟹ XP_063129735 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273666 ⟹ XP_063129736 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273667 ⟹ XP_063129737 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_112292 | (Get FASTA) | NCBI Sequence Viewer |
XP_006250645 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250646 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017454878 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038948413 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129735 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129736 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129737 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | BAA18911 | (Get FASTA) | NCBI Sequence Viewer |
EDL84016 | (Get FASTA) | NCBI Sequence Viewer | |
EDL84017 | (Get FASTA) | NCBI Sequence Viewer | |
EDL84018 | (Get FASTA) | NCBI Sequence Viewer | |
EDL84019 | (Get FASTA) | NCBI Sequence Viewer | |
EDL84020 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000000064.1 | ||
ENSRNOP00000058432.3 | |||
ENSRNOP00000081239.1 | |||
ENSRNOP00000081704.1 | |||
GenBank Protein | P97874 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_112292 ⟸ NM_031030 |
- UniProtKB: | P97874 (UniProtKB/Swiss-Prot), F1LMD9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250645 ⟸ XM_006250583 |
- Peptide Label: | isoform X2 |
- UniProtKB: | F1LMD9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250646 ⟸ XM_006250584 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8I5ZTC5 (UniProtKB/TrEMBL), F1LMD9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017454878 ⟸ XM_017599389 |
- Peptide Label: | isoform X5 |
- UniProtKB: | A6KPE6 (UniProtKB/TrEMBL), A6KPE7 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000000064 ⟸ ENSRNOT00000000064 |
RefSeq Acc Id: | XP_038948413 ⟸ XM_039092485 |
- Peptide Label: | isoform X6 |
Ensembl Acc Id: | ENSRNOP00000058432 ⟸ ENSRNOT00000061720 |
Ensembl Acc Id: | ENSRNOP00000081704 ⟸ ENSRNOT00000105303 |
Ensembl Acc Id: | ENSRNOP00000081239 ⟸ ENSRNOT00000114393 |
RefSeq Acc Id: | XP_063129735 ⟸ XM_063273665 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8L2QS27 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063129736 ⟸ XM_063273666 |
- Peptide Label: | isoform X4 |
- UniProtKB: | F1LMD9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063129737 ⟸ XM_063273667 |
- Peptide Label: | isoform X7 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-P97874-F1-model_v2 | AlphaFold | P97874 | 1-1305 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13699148 | ||||||||
Promoter ID: | EPDNEW_R9672 | ||||||||
Type: | initiation region | ||||||||
Name: | Gak_1 | ||||||||
Description: | cyclin G associated kinase | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:621589 | AgrOrtholog |
BioCyc Gene | G2FUF-16681 | BioCyc |
Ensembl Genes | ENSRNOG00000000048 | Ensembl, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000000064.3 | UniProtKB/TrEMBL |
ENSRNOT00000061720.4 | UniProtKB/TrEMBL | |
ENSRNOT00000105303.1 | UniProtKB/TrEMBL | |
ENSRNOT00000114393.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.10.287.110 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
2.60.40.1110 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
3.90.190.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Transferase(Phosphotransferase) domain 1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | C2_domain_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
DnaJ_domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
J_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Kinase-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Prot-tyrosine_phosphatase-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Prot_kinase_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ser/Thr_kinase_AS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Tensin_C2-dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Tensin_phosphatase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:81659 | UniProtKB/Swiss-Prot |
NCBI Gene | 81659 | ENTREZGENE |
PANTHER | AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED | UniProtKB/TrEMBL |
CYCLIN G ASSOCIATED KINASE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
CYCLIN-G-ASSOCIATED KINASE | UniProtKB/TrEMBL | |
SERINE/THREONINE PROTEIN KINASE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | DnaJ | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Pkinase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PTEN_C2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Gak | PhenoGen |
PROSITE | C2_TENSIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
DNAJ_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PPASE_TENSIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PROTEIN_KINASE_DOM | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PROTEIN_KINASE_ST | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000000048 | RatGTEx |
SMART | DnaJ | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTEN_C2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
S_TKc | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF46565 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF49562 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF52799 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF56112 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A0A8I5ZS37_RAT | UniProtKB/TrEMBL |
A0A8I5ZTC5 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8L2QS27 | ENTREZGENE, UniProtKB/TrEMBL | |
A6KPE6 | ENTREZGENE, UniProtKB/TrEMBL | |
A6KPE7 | ENTREZGENE, UniProtKB/TrEMBL | |
A6KPE8_RAT | UniProtKB/TrEMBL | |
A6KPE9_RAT | UniProtKB/TrEMBL | |
F1LMD9 | ENTREZGENE, UniProtKB/TrEMBL | |
GAK_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2004-09-10 | Gak | cyclin G associated kinase | cyclin G-associated kinase | Name updated | 1299863 | APPROVED | |
2002-08-07 | Gak | cyclin G-associated kinase | Symbol and Name status set to provisional | 70820 | PROVISIONAL |
Note Type | Note | Reference |
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gene_domains | contains a serine/threonine kinase-like catalytic domain at the N-terminal, and a leucine zipper region at the C-terminal | 728630 |
gene_physical_interaction | protein associates directly with cyclin G in vivo | 728630 |