Gene: Taf1 (TATA-box binding protein associated factor 1) Rattus norvegicus
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Symbol: Taf1
Name: TATA-box binding protein associated factor 1
Description: ENCODES a protein that exhibits DNA binding (ortholog); H3K27me3 modified histone binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN response to drug; cellular response to ATP (ortholog); cellular response to DNA damage stimulus (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Mental Retardation, X-Linked, Syndromic 33 (ortholog); FOUND IN nucleus; MLL1 complex (ortholog); nuclear chromatin (ortholog); INTERACTS WITH 1,3-dinitrobenzene; 2,4-dinitrotoluene; 2,6-dinitrotoluene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC317256; RGD1562050; similar to CCG1; TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor; transcription initiation factor TFIID subunit 1
Orthologs:
Homo sapiens (human) : TAF1 (TATA-box binding protein associated factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Taf1 (TATA-box binding protein associated factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Taf1 (TATA-box binding protein associated factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TAF1 (TATA-box binding protein associated factor 1)
Canis lupus familiaris (dog) : TAF1 (TATA-box binding protein associated factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Taf1 (TATA-box binding protein associated factor 1)
Sus scrofa (pig) : TAF1 (TATA-box binding protein associated factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X71,412,291 - 71,486,456 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X72,261,626 - 72,335,791 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X89,590,556 - 89,666,569 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX66,996,430 - 67,071,877 (+)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Taf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562050
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE