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Gene: Tfap2a (transcription factor AP-2 alpha) Rattus norvegicus
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Symbol: Tfap2a
Name: transcription factor AP-2 alpha
Description: Exhibits sequence-specific DNA binding activity and transcription factor binding activity. Involved in several processes, including Schwann cell development; response to lipopolysaccharide; and response to water deprivation. Localizes to the cytosol and nucleus. Human ortholog(s) of this gene implicated in branchiooculofacial syndrome. Orthologous to human TFAP2A (transcription factor AP-2 alpha); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; furan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: activating enhancer-binding protein 2 alpha; activating enhancer-binding protein 2-alpha; activator protein 2; AP-2 transcription factor; AP2-alpha; LOC306862; Tcfap2a; transcription factor AP-2, alpha; transcription factor AP-2-alpha
Orthologs:
Homo sapiens (human) : TFAP2A (transcription factor AP-2 alpha)  HGNC  Alliance
Mus musculus (house mouse) : Tfap2a (transcription factor AP-2, alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tfap2a (transcription factor AP-2 alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : TFAP2A (transcription factor AP-2 alpha)
Canis lupus familiaris (dog) : TFAP2A (transcription factor AP-2 alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tfap2a (transcription factor AP-2 alpha)
Sus scrofa (pig) : TFAP2A (transcription factor AP-2 alpha)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01724,653,342 - 24,670,457 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1724,654,902 - 24,670,457 (+)Ensembl
Rnor_5.01726,596,839 - 26,634,214 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41730,017,580 - 30,034,852 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11730,020,346 - 30,035,192 (+)NCBI
Celera1723,700,225 - 23,715,767 (+)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tfap2a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310267
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.