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Gene: Nipbl (NIPBL, cohesin loading factor) Rattus norvegicus
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Symbol: Nipbl
Name: NIPBL, cohesin loading factor
Description: Predicted to have several functions, including chromo shadow domain binding activity; histone deacetylase binding activity; and mediator complex binding activity. Predicted to be involved in several processes, including animal organ morphogenesis; regulation of transcription by RNA polymerase II; and sister chromatid cohesion. Predicted to localize to the chromatin; cytosol; and nucleus. Human ortholog(s) of this gene implicated in Cornelia de Lange syndrome 1. Orthologous to human NIPBL (NIPBL cohesin loading factor); INTERACTS WITH acrylamide; atrazine; gamma-hexachlorocyclohexane.
Type: protein-coding
RefSeq Status: MODEL
Also known as: delangin; IDN3; Nipped-B homolog; Nipped-B homolog (Drosophila); nipped-B-like protein
Orthologs:
Homo sapiens (human) : NIPBL (NIPBL cohesin loading factor)  HGNC  Alliance
Mus musculus (house mouse) : Nipbl (NIPBL cohesin loading factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nipbl (NIPBL cohesin loading factor)
Pan paniscus (bonobo/pygmy chimpanzee) : NIPBL (NIPBL cohesin loading factor)
Canis lupus familiaris (dog) : NIPBL (NIPBL cohesin loading factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nipbl (NIPBL cohesin loading factor)
Sus scrofa (pig) : NIPBL (NIPBL cohesin loading factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0257,508,830 - 57,676,197 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl257,509,428 - 57,600,820 (-)Ensembl
Rnor_5.0278,992,721 - 79,160,884 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4257,908,828 - 58,099,422 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1257,837,538 - 58,006,254 (-)NCBI
Celera253,014,297 - 53,179,686 (-)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nipbl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306393
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.