Edpm1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Edpm1 (Estrogen-dependent pituitary mass QTL 1) Rattus norvegicus

Symbol: Edpm1
Name: Estrogen-dependent pituitary mass QTL 1
RGD ID: 61371
Also known as: Edpm2-1
Trait: pituitary gland mass   (VT:0010496)    
Measurement Type: pituitary gland wet weight   (CMO:0000853)    
LOD Score: 4.0
P Value: 0.05
Variance: 9.6
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2235,134,841 - 88,029,593RGD_MAPPER_PIPELINE
Rnor_6.0234,088,175 - 91,101,903RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0253,216,438 - 110,970,864RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4234,914,943 - 79,914,943RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.14187,218,368 - 187,371,129RGD
Cross Type: intercross
Strains Crossed: BN/SsNHsd F344/NHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
F344/NHsd  (IEA)

References

References - curated
1. Wendell DL and Gorski J, Mamm Genome 1997;8(11):823-9

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
621518Nlnneurolysin23408697034185835Rat
727976Sgtbsmall glutamine rich tetratricopeptide repeat co-chaperone beta23418593834222428Rat
1306583Trappc13trafficking protein particle complex subunit 1323422339634254995Rat
621587Trim23tripartite motif-containing 2323425530034288140Rat
1310204Ppwd1peptidylprolyl isomerase domain and WD repeat containing 123428885334313094Rat
1310461Cenpkcentromere protein K23431276634373945Rat
1307678Adamts6ADAM metallopeptidase with thrombospondin type 1 motif, 623437414234589676Rat
11514529LOC10834993660S ribosomal protein L21 pseudogene23441891434419428Rat
11419886LOC108349937uncharacterized protein C11orf98 homolog23456863634570258Rat
11490900LOC10834993840S ribosomal protein S29-like23470043234700645Rat
1310697Cwc27CWC27 spliceosome associated cyclophilin23471642034923060Rat
1305356Srek1ip1SREK1-interacting protein 123492318734940410Rat
1564672Shisal2bshisa like 2B23494671334965597Rat
1309360Rgs7bpregulator of G-protein signaling 7 binding protein23507208135619085Rat
6501343LOC100909885olfactory receptor 8D1-like23517850735179436Rat
6501087LOC100909958olfactory receptor 149-like23519158035192515Rat
6500375LOC100910041olfactory receptor 146-like23522841835229353Rat
6500141LOC100910111olfactory receptor 147-like23529831435299288Rat
1334365Olr1270-psolfactory receptor pseudogene 127023535985135360529Rat
6499188LOC100910282olfactory receptor 8D1-like23538468335385566Rat
6499368LOC100910323olfactory receptor 8D1-like23539195035393112Rat
6498905LOC100910363olfactory receptor 149-like23539794535398880Rat
6498517LOC100910402olfactory receptor 146-like23541603535416967Rat
6498714LOC100910439olfactory receptor 146-like23543478435435719Rat
1333519Olr1276-psolfactory receptor pseudogene 127623548485335485401Rat
6498270LOC100910467olfactory receptor 144-like23549782335498758Rat
9463885LOC103691445olfactory receptor 150-like23553133835532285Rat
6497623LOC100910582ras-related protein Rap-1A-like23556799535568813Rat
1589594LOC502504similar to CG11883-PB, isoform B23567765635714861Rat
1595064Rnf180ring finger protein 18023571810035892578Rat
11355672LOC108348103serine protease inhibitor Kazal-type 5-like23593202936004966Rat
6495863LOC100910906serine protease inhibitor Kazal-type 14-like23601104536014007Rat
1596746Spink9serine peptidase inhibitor, Kazal type 923608882736096583Rat
2845Htr1a5-hydroxytryptamine receptor 1A23624662836247896Rat
1594381LOC499522similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI)23649054836491169Rat
1560462RGD1560462similar to ribosomal protein L10a23680704836807751Rat
9151583LOC103691446uncharacterized LOC10369144623687578736969702Rat
7695496LOC102556361uncharacterized LOC10255636123721144937235682Rat
1311133Ipo11importin 1123795298238120451Rat
1311752Dimt1DIMT1 rRNA methyltransferase and ribosome maturation factor23812056238144871Rat
70974Kif2akinesin family member 2A23814550738208765Rat
1564606RGD1564606similar to 60S ribosomal protein L23a23823069738231287Rat
7517146LOC102546512uncharacterized LOC10254651223827583538340620Rat
11513946LOC108349940uncharacterized LOC10834994023832846238336929Rat
11413279LOC108349939uncharacterized LOC10834993923839028738427188Rat
11449327LOC108349941uncharacterized LOC10834994123854585238563501Rat
7751753LOC102546727uncharacterized LOC10254672723874315438756298Rat
11452971LOC108349942uncharacterized LOC10834994223880472738811850Rat
9403084C2H5orf64chromosome 2 open reading frame, human C5orf6423884039138847614Rat
9150057LOC103691449uncharacterized LOC10369144923890955738932901Rat
1306624Zswim6zinc finger, SWIM-type containing 623897804239042886Rat
7567902LOC102549347uncharacterized LOC10254934723928193339314656Rat
2324600Smim15small integral membrane protein 1523931471439319874Rat
1560158Ndufaf2NADH:ubiquinone oxidoreductase complex assembly factor 223932214539434535Rat
1311570Ercc8ERCC excision repair 8, CSA ubiquitin ligase complex subunit23943461739473392Rat
9458376LOC10369145060S ribosomal protein L29 pseudogene23950258539503082Rat
1560076RGD1560076similar to 60S ribosomal protein L29 (P23)23950749039508022Rat
1305799Depdc1bDEP domain containing 1B23998079640069982Rat
3281Pde4dphosphodiesterase 4D24021999941468551Rat
1310560Elovl7ELOVL fatty acid elongase 724037321140386643Rat
11419093LOC108350211uncharacterized LOC10835021124037440140382706Rat
2325413Mir582microRNA 58224086375040863830Rat
11487276LOC108350210uncharacterized LOC10835021024089716240970497Rat
11451820LOC108349943uncharacterized LOC10834994324152607641529625Rat
620923Rab3cRAB3C, member RAS oncogene family24157095541786681Rat
1586621GaptGrb2-binding adaptor protein, transmembrane24186955541874130Rat
620760Plk2polo-like kinase 224191114341916901Rat
1585493LOC686105similar to solute carrier family 25, member 524204346142044601Rat
9436047LOC103691451uncharacterized LOC10369145124269892042705475Rat
1560402RGD1560402similar to Phosphoglycerate kinase 124272674742728100Rat
9453411LOC103691452uncharacterized LOC10369145224280377942879703Rat
1309504Actbl2actin, beta-like 224282941342832160Rat
1305492Gpbp1GC-rich promoter binding protein 124300204143070236Rat
1311241Mier3MIER family member 324326630143295175Rat
9201190LOC103691453activated RNA polymerase II transcriptional coactivator p15 pseudogene24327770343279018Rat
2318781LOC100362101hypothetical LOC10036210124329811243301515Rat
620966Map3k1mitogen-activated protein kinase kinase kinase 124332951643393203Rat
7683682LOC102553935uncharacterized LOC10255393524339907943416728Rat
7736543LOC102554057uncharacterized LOC10255405724347312043484070Rat
7606174LOC102554307uncharacterized LOC10255430724362087743688294Rat
1307735Ankrd55ankyrin repeat domain 5524381923444196602Rat
7539111LOC102554784uncharacterized LOC10255478424400590444026422Rat
11514393LOC108349944uncharacterized LOC10834994424402426444027278Rat
9208714LOC103691456uncharacterized LOC10369145624410430444167977Rat
2903Il6stinterleukin 6 cytokine family signal transducer24427919944319427Rat
1586478Il31rainterleukin 31 receptor A24433334744408005Rat
9469491LOC103691462serine/arginine-rich splicing factor 3 pseudogene24434307344344856Rat
1308793Ddx4DEAD-box helicase 424444761044504263Rat
1311881Slc38a9solute carrier family 38, member 924451255644592793Rat
7637192LOC102551224heterogeneous nuclear ribonucleoprotein R-like24455815744561787Rat
621832Plpp1phospholipid phosphatase 124466407644726820Rat
1305984MtrexMtr4 exosome RNA helicase24472671644787013Rat
2318361Dhx29DExH-box helicase 2924478706644837834Rat
1565217Ccnocyclin O24485704344860317Rat
1584164Mcidasmulticiliate differentiation and DNA synthesis associated cell cycle protein24486324644869732Rat
4888547Mir449cmicroRNA 449c24489606644896164Rat
2325536Mir449amicroRNA 449a24489760144897691Rat
1307506Gpx8glutathione peroxidase 824490333744907046Rat
11360523LOC108350166glutathione peroxidase-like24491106344913406Rat
1584143Cdc20bcell division cycle 20B24491680644947860Rat
628640Gzmagranzyme A24496884644981436Rat
68401Gzmkgranzyme K24506913645077154Rat
71013Esm1endothelial cell-specific molecule 124510439245113130Rat
1561161Cspg4bchondroitin sulfate proteoglycan 4B24518239145241179Rat
7639001LOC102550633uncharacterized LOC10255063324531185245332772Rat
1310367Snx18sorting nexin 1824545478245480798Rat
11474944LOC108349945uncharacterized LOC10834994524549191945494189Rat
68345Hspb3heat shock protein family B (small) member 324551778845518502Rat
2323540LOC100359700eukaryotic translation initiation factor 1-like24558950745621493Rat
1594505LOC365671similar to Protein CGI-11724563349645634274Rat
1597407Arl15ADP-ribosylation factor like GTPase 1524566885246053167Rat
2324334LOC100362624biliverdin reductase A-like24576996545770823Rat
9105546LOC103691458uncharacterized LOC10369145824595824245970614Rat
11457032LOC108350225olfactory receptor 8B8-like24606678046067727Rat
1333637Olr1262olfactory receptor 126224614048246141423Rat
6498960LOC100910378olfactory receptor 145-like24618608446187040Rat
11356511LOC108350226olfactory receptor 147-like24620375546204729Rat
11376212LOC108350227olfactory receptor 147-like24621069246211666Rat
11502980LOC108350228olfactory receptor 147-like24622298546223959Rat
1594380Ndufs4NADH:ubiquinone oxidoreductase subunit S424637248846476162Rat
2633Fstfollistatin24653758946544813Rat
9411836LOC103691459uncharacterized LOC10369145924671944846763112Rat
1359477Mocs2molybdenum cofactor synthesis 224698096446992886Rat
621632Itga2integrin subunit alpha 224699690447097011Rat
2923Itga1integrin subunit alpha 124712740347281387Rat
1359591Pelopelota mRNA surveillance and ribosome rescue factor24726675847268526Rat
1594504LOC365673similar to microfibrillar-associated protein 124736037247361659Rat
2320298LOC100361367hypothetical LOC10036136724751539347516304Rat
9315617LOC10369146460S ribosomal protein L23 pseudogene24760615347606633Rat
7724584LOC102552498uncharacterized LOC10255249824794665847950945Rat
7637193LOC10255257060S ribosomal protein L29-like24811999248120978Rat
9476424LOC103691460putative 60S ribosomal protein L39-like 524812161148121763Rat
11474953LOC10835016760S ribosomal protein L17 pseudogene24819702548197639Rat
61957Isl1ISL LIM homeobox 124848891148501217Rat
11393885LOC108349946myosin regulatory light chain 12B-like24857996348581439Rat
11492487LOC108349947uncharacterized LOC10834994724894107048947265Rat
1562302LOC499530hypothetical protein LOC49953024896164548970107Rat
6496027LOC100910880pescadillo homolog24902879149031310Rat
1587384Parp8poly (ADP-ribose) polymerase family, member 824908694949455848Rat
6495488LOC100910954cellular tumor antigen p53-like24933832849383164Rat
9327789LOC103691461uncharacterized LOC10369146124935952149360024Rat
11423358LOC108350168glyceraldehyde-3-phosphate dehydrogenase pseudogene24956970449578004Rat
7691404LOC102557105MLV-related proviral Env polyprotein-like24964414849648394Rat
621067Embembigin24968276349733475Rat
1592324LOC689438similar to ribonucleic acid binding protein S124978977449791454Rat
7599216LOC102553471uncharacterized LOC10255347124979928849816849Rat
620688Hcn1hyperpolarization-activated cyclic nucleotide-gated potassium channel 125009957650499799Rat
1592273LOC689489similar to DnaJ-like protein 225057085450571728Rat
1309697Mrps30mitochondrial ribosomal protein S3025104254851049423Rat
11387679LOC108349948uncharacterized LOC10834994825146490651474501Rat
7618961LOC102555810uncharacterized LOC10255581025159920451619039Rat
2606Fgf10fibroblast growth factor 1025167348051747533Rat
1561520RGD1561520similar to Ab2-16225217084852171654Rat
1587346Nntnicotinamide nucleotide transhydrogenase25218952352283095Rat
11371833LOC10834994960S ribosomal protein L15 pseudogene25228316952293039Rat
1305668Paip1poly(A) binding protein interacting protein 125230092152328212Rat
1306227RGD1306227similar to 4833420G17Rik protein25233339652355044Rat
1562550Tmem267transmembrane protein 26725235644952366075Rat
7512922LOC102556362uncharacterized LOC10255636225237343352378654Rat
619937Ccl28C-C motif chemokine ligand 2825237934152403979Rat
7567660LOC102547360uncharacterized LOC10254736025240372852414654Rat
9106568LOC103691467uncharacterized LOC10369146725240984252412687Rat
70970Hmgcs13-hydroxy-3-methylglutaryl-CoA synthase 125242735152445082Rat
1308116Nim1kNIM1 serine/threonine protein kinase25244874652494137Rat
1307638Zfp131zinc finger protein 13125250318552532097Rat
2323229LOC100363314hypothetical protein LOC10036331425253106952544196Rat
7546492LOC102546617NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like25254492352547763Rat
9353912LOC103691494annexin-2 receptor-like25263822452638749Rat
7678828LOC102547192annexin-2 receptor-like25265541952657530Rat
11409058LOC108349950annexin-2 receptor-like25265800952659717Rat
7557368LOC102556643uncharacterized LOC10255664325267105452679414Rat
7525204LOC102547748uncharacterized LOC10254774825272496252728598Rat
9193186LOC103691468uncharacterized LOC10369146825278131152830428Rat
7643568LOC102547847uncharacterized LOC10254784725278193952785805Rat
11361537LOC108349951annexin-2 receptor-like25292206752926282Rat
7700687LOC102548142uncharacterized LOC10254814225293799652942333Rat
9313892LOC103691469uncharacterized LOC10369146925296780352969283Rat
9104926LOC103690229collagen alpha-1(I) chain-like25299070653000343Rat
9163282LOC103691471uncharacterized LOC10369147125299180452994545Rat
9249252LOC103691470uncharacterized LOC10369147025300049953002698Rat
7526200LOC102550005uncharacterized LOC10255000525300973753024211Rat
7497849LOC102548571uncharacterized LOC10254857125306381553092320Rat
3660Selenopselenoprotein P25310591253116198Rat
1561503Ccdc152coiled-coil domain containing 15225311610553140661Rat
9428698LOC103691472uncharacterized LOC10369147225312620353143812Rat
2687Ghrgrowth hormone receptor25314922553413954Rat
7570025LOC102548637uncharacterized LOC10254863725341402553422489Rat
9243561LOC103691473V-type proton ATPase subunit e 1 pseudogene25346083553461162Rat
2322829LOC100363518hypothetical LOC10036351825346787253511990Rat
11378089LOC108350169glyceraldehyde-3-phosphate dehydrogenase-like25371196453712598Rat
11434707LOC10834995260S ribosomal protein L21 pseudogene25371764553718143Rat
1307580Fbxo4F-box protein 425379795453811134Rat
1305938RGD1305938similar to expressed sequence AW54987725381312953827329Rat
1584008Oxct13-oxoacid CoA transferase 125385973854007733Rat
9458700LOC103691474histone H3.3-like25391152953912364Rat
1566344RGD1566344similar to eukaryotic translation elongation factor 1 alpha 125415525154156770Rat
11486839LOC108349953uncharacterized LOC10834995325418630854190930Rat
1308448Plcxd3phosphatidylinositol-specific phospholipase C, X domain containing 325419153854360780Rat
2238C6complement C625446033354533801Rat
7724377LOC102554146septin-7-like25455032854558461Rat
7666176LOC102554246maestro heat-like repeat-containing protein family member 2B-like25457224154573721Rat
1305413Mroh2bmaestro heat-like repeat family member 2B25462114054675142Rat
11467831LOC108349954maestro heat-like repeat-containing protein family member 2B25468114754686154Rat
620318C7complement C725470762154781624Rat
1305805Card6caspase recruitment domain family, member 625481067654824050Rat
621204Rpl37ribosomal protein L3725483263454834587Rat
3387Prkaa1protein kinase AMP-activated catalytic subunit alpha 125485768854893404Rat
1564042Ttc33tetratricopeptide repeat domain 3325489732054944241Rat
11361879LOC108349955small nuclear ribonucleoprotein G pseudogene25491717154921545Rat
628641Ptger4prostaglandin E receptor 425495162554966470Rat
9137783LOC103691475uncharacterized LOC10369147525500694355047332Rat
2319559Rps15al4ribosomal protein S15A-like 425505527455055761Rat
9459067LOC103691476uncharacterized LOC10369147625530607755309542Rat
9241074LOC103691477uncharacterized LOC10369147725538791555394466Rat
7535159LOC102550321uncharacterized LOC10255032125563954755713132Rat
621007Dab2DAB adaptor protein 225574735355768848Rat
620319C9complement C925577556255823807Rat
1563421Fyb1FYN binding protein 125583490455983805Rat
1307224RictorRPTOR independent companion of MTOR, complex 225601389856105818Rat
1302983Osmroncostatin M receptor25610749156163522Rat
7583722LOC102552296uncharacterized LOC10255229625616241956164259Rat
7720519LOC102550695uncharacterized LOC10255069525619312756197394Rat
7503935LOC10255077060S ribosomal protein L21-like25622659456227096Rat
621431LifrLIF receptor subunit alpha25642491056489346Rat
9278621LOC103691478uncharacterized LOC10369147825642928556433920Rat
9199903LOC103691479uncharacterized LOC10369147925648949956493939Rat
1306592EgflamEGF-like, fibronectin type III and laminin G domains25650300256681334Rat
11382661LOC108349957uncharacterized LOC10834995725653384156551192Rat
7638000LOC102550930peptidyl-prolyl cis-trans isomerase FKBP3-like25662641456632952Rat
11467840LOC108349956uncharacterized LOC10834995625667975856683635Rat
11484067LOC108349958uncharacterized LOC10834995825672387356769241Rat
1594500LOC365692similar to ribosomal protein S925678833356789091Rat
2677Gdnfglial cell derived neurotrophic factor25688418156912964Rat
9431969LOC103691480uncharacterized LOC10369148025688910556890822Rat
1309487Wdr70WD repeat domain 7025694446257196522Rat
7682751LOC102551547uncharacterized LOC10255154725696798356972022Rat
9381830LOC103691492mitochondrial cardiolipin hydrolase pseudogene25702422157025426Rat
621199Nup155nucleoporin 15525720666557258242Rat
1310081Cplane1ciliogenesis and planar polarity effector 125727417557350003Rat
1594498LOC365694similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP)25730119457302424Rat
6495770LOC100911004heterogeneous nuclear ribonucleoprotein A1-like25735134957353956Rat
1310081Cplane1ciliogenesis and planar polarity effector 125744437357472465Rat
1594378LOC499538similar to non-POU domain containing, octamer-binding25748676757488200Rat
7590169LOC10255380560S ribosomal protein L9-like25749974957501747Rat
1306393NipblNIPBL, cohesin loading factor25750883057676197Rat
11388086LOC10834995960S ribosomal protein L23-like25764898357651152Rat
2324086LOC100362772ribosomal protein S12-like25772506957725578Rat
2323951LOC100362827high-mobility group nucleosomal binding domain 2-like25772858457729007Rat
11452641LOC108349960uncharacterized LOC10834996025774993157775595Rat
9200405LOC103691481uncharacterized LOC10369148125780688757809751Rat
11386716LOC108349961uncharacterized LOC10834996125783367957839632Rat
3698Slc1a3solute carrier family 1 member 325786088157935363Rat
11382166LOC108349962uncharacterized LOC10834996225794072957944594Rat
1307559Ranbp3lRAN binding protein 3-like25822177358458072Rat
1583619LOC679871hypothetical protein LOC67987125823640558237866Rat
1594499LOC365693similar to Nuclear protein SkiP (Ski-interacting protein) (SNW1 protein) (Nuclear receptor coactivator NCoA-62)25826646058268039Rat
11356949LOC10835015540S ribosomal protein S6 pseudogene25834970358360322Rat
6494410LOC10091122740S ribosomal protein S9-like25842135758422041Rat
9310813LOC10369149740S ribosomal protein S2 pseudogene25844645258448572Rat
1306809Nadk2NAD kinase 2, mitochondrial25846258858504735Rat
1562456Skp2S-phase kinase associated protein 225850614658534211Rat
1563920Lmbrd2LMBR1 domain containing 225853447458590767Rat
1596810LOC680078hypothetical protein LOC68007825864542258662825Rat
1564365Ugt3a2UDP glycosyltransferase 3 family, polypeptide A225866633758682212Rat
1308776Capslcalcyphosine-like25872485558755220Rat
620450Spef2sperm flagellar 225890193759084194Rat
11462109LOC108349963uncharacterized LOC10834996325891136958919720Rat
9220222LOC103691498sperm flagellar protein 2-like25914136359181942Rat
9232293LOC103691482uncharacterized LOC10369148225941873359425718Rat
6492359LOC100911520killer cell lectin-like receptor 5-like25953949459544897Rat
2323317LOC100359824hypothetical LOC10035982425965689459662581Rat
7666183LOC102554389zinc finger protein 862-like25987605859879483Rat
11493974LOC108349964uncharacterized LOC10834996425992927159936351Rat
3407Prlrprolactin receptor26013141060325686Rat
621767Agxt2alanine-glyoxylate aminotransferase 226033766760379144Rat
621729Dnajc21DnaJ heat shock protein family (Hsp40) member C2126041944660446656Rat
1308508Brix1biogenesis of ribosomes BRX126045054760461425Rat
1306496Rad1RAD1 checkpoint DNA exonuclease26046151360469646Rat
7503607LOC10254829539S ribosomal protein L40, mitochondrial-like26047004360472523Rat
1564928Ttc23ltetratricopeptide repeat domain 23-like26049231460538551Rat
11463542LOC108350156protein dpy-30 homolog pseudogene26052423360525676Rat
1305942Rai14retinoic acid induced 1426054608360684365Rat
9387191LOC103691483uncharacterized LOC10369148326073552160743685Rat
7655658LOC102547646uncharacterized LOC10254764626077919260783463Rat
11378090LOC10835022960S ribosomal protein L17 pseudogene26084474160845328Rat
1305010C1qtnf3C1q and TNF related 326092016060942586Rat
3048Amacralpha-methylacyl-CoA racemase26094927660961342Rat
1306690Slc45a2solute carrier family 45, member 226096667160999398Rat
1311550Rxfp3relaxin family peptide receptor 326100633761007767Rat
1307323Adamts12ADAM metallopeptidase with thrombospondin type 1 motif, 1226103907261340687Rat
11358051LOC108349966uncharacterized LOC10834996626134588761383599Rat
1359527Tars1threonyl-tRNA synthetase 126139463261414115Rat
1592966LOC680363hypothetical protein LOC68036326147822161479356Rat
1565852LOC499541LRRGT0004526169178561712850Rat
1594163LOC680268hypothetical protein LOC68026826169462161694896Rat
1563766LOC499542LRRGT0017826174958161757917Rat
11511747LOC108350170glyceraldehyde-3-phosphate dehydrogenase pseudogene26186665461868694Rat
3196Npr3natriuretic peptide receptor 326188394661950291Rat
1560001LOC499544LRRGT0015426199174262018698Rat
621582Sub1SUB1 regulator of transcription26201990262034704Rat
1311890Zfrzinc finger RNA binding protein26215025162213048Rat
1307902Mtmr12myotubularin related protein 1226223649762305995Rat
621226Golph3golgi phosphoprotein 326236075462388773Rat
619958Pdzd2PDZ domain containing 226239974862520448Rat
2324713LOC100363177ferritin light chain 1-like26255615962557234Rat
6504200LOC100909396uncharacterized LOC10090939626285024562852408Rat
1306502RGD1306502similar to hypothetical protein FLJ1119326287087162887048Rat
1307626Droshadrosha ribonuclease III26288726763000307Rat
9362373LOC103695100uncharacterized LOC10369510026309465463108200Rat
2322Cdh6cadherin 626310072363246618Rat
11493630LOC10835017160S ribosomal protein L7a pseudogene26334915263457910Rat
11453461LOC108350230glyceraldehyde-3-phosphate dehydrogenase pseudogene26377458763777408Rat
7662155LOC102556442uncharacterized LOC10255644226443363964453223Rat
2323519LOC100359721hypothetical LOC10035972126462757364630635Rat
2323466LOC100359774hypothetical LOC10035977426497695064977728Rat
1585807LOC680982hypothetical protein LOC68098226636776166369428Rat
7662910LOC102552232uncharacterized LOC10255223226645923066522564Rat
1564125RGD1564125similar to Cln5 protein26660059566615026Rat
2322932LOC100360013ubiquitin-associated protein 226669848566722913Rat
1308343Cdh9cadherin 926693879667078897Rat
7545253LOC102552872uncharacterized LOC10255287226742307667434026Rat
1583588LOC681102similar to synaptosomal-associated protein 23 isoform SNAP23B26830493468306489Rat
6499766LOC100910178pro-epidermal growth factor-like26882060568895943Rat
2542Egfepidermal growth factor26882061668895537Rat
1583573LOC681117similar to ribosomal protein L626916003469204472Rat
619741Cdh10cadherin 1026941517469636849Rat
9323704LOC103691484putative hydrolase RBBP9 pseudogene26946220669464200Rat
7505957LOC102553625uncharacterized LOC10255362526963236169726367Rat
7662935LOC102553734uncharacterized LOC10255373426976306569809916Rat
1593220LOC365709similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin e127020335270204638Rat
1586190LOC294831similar to ubiquitin-conjugating enzyme E2R 227022468870343525Rat
9087741LOC103691485uncharacterized LOC10369148527044576070453754Rat
1566350Cdh12cadherin 1227131022872540063Rat
1565422RGD1565422similar to 60S ribosomal protein L3527165212171755719Rat
1562936RGD1562936similar to Heat shock protein HSP 90-beta (HSP 84)27295968172963589Rat
7655727LOC102554147uncharacterized LOC10255414727302672573031439Rat
1305430Cdh18cadherin 1827365140874693342Rat
1561906RGD1561906similar to RIKEN cDNA 4930430F0827381996073822243Rat
7667725LOC102554526heterogeneous nuclear ribonucleoprotein A3-like27409123674092283Rat
9455317LOC103690206cadherin-18-like27436035974451902Rat
1596656LOC682635similar to CG31855-PA27471190674714279Rat
11464142LOC108350172igE-binding protein-like27506221675063246Rat
1583285Hspd1-ps25heat shock protein 1, pseudogene 2527549530575498884Rat
11445903LOC108350231uncharacterized LOC10835023127571089175711808Rat
9429209LOC103691486uncharacterized LOC10369148627571237975743591Rat
7523639LOC102554929uncharacterized LOC10255492927599649976004872Rat
1563445RGD1563445similar to glyceraldehyde-3-phosphate dehydrogenase27622567476226656Rat
9329744LOC103691487uncharacterized LOC10369148727639188176396195Rat
1589593LOC502512similar to 60S ribosomal protein L7a27640964176423866Rat
2321536Sirpdsignal-regulatory protein delta27669410776941002Rat
2321484LOC100360774signal-regulatory protein alpha-like27695503876962306Rat
1559887RGD1559887similar to Transducin-like enhancer protein 4 (Groucho-related protein 4) (Grg-4)27705771977112614Rat
7621135LOC102546663tyrosine-protein phosphatase non-receptor type substrate 1-like27727777577286844Rat
9082324LOC103691499signal-regulatory protein beta-1-like27729973977302572Rat
621491Basp1brain abundant, membrane attached signal protein 127758642477632626Rat
1566273RGD1566273similar to exo-alpha-sialidase (EC 3.2.1.18) - Trypanosoma cruzi27775599077772012Rat
11386721LOC108350173charged multivesicular body protein 5 pseudogene27777163977772609Rat
1589753LOC310177similar to RIKEN cDNA 0610040D2027778378877784626Rat
1307193Myo10myosin X27786839878072443Rat
9304689LOC103691488uncharacterized LOC10369148827796872877976188Rat
11403233LOC108349968uncharacterized LOC10834996827809281578096188Rat
11359058LOC10834996760S ribosomal protein L7a pseudogene27813403578138432Rat
2318290LOC100362397ubiquitin-conjugating enzyme E2L 3-like27821294278213944Rat
7667351LOC102546311histone H3.3-like27827345178275631Rat
6494071LOC100911298heterogeneous nuclear ribonucleoprotein M-like27828131778283487Rat
1565003Retreg1reticulophagy regulator 127839192178401569Rat
1309146Zfp622zinc finger protein 62227840731278421152Rat
9421618LOC103691489histone H3.3-like27841767378419853Rat
1593219LOC365713similar to 60S ribosomal protein L927852928578529861Rat
1559945Marchf11membrane associated ring-CH-type finger 1127882505378926402Rat
1305813Fbxl7F-box and leucine-rich repeat protein 727906790779439987Rat
1595140LOC685308similar to Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific transplantation 84 kDa antigen) (TSTA)27956880279571074Rat
619925AnkhANKH inorganic pyrophosphate transport regulator28013156380256948Rat
2324500OtulinOTU deubiquitinase with linear linkage specificity28026772480293204Rat
1563205OtulinlOTU deubiquitinase with linear linkage specificity like28038364280408672Rat
1308360Triotrio Rho guanine nucleotide exchange factor28047139880769313Rat
9431470LOC103691490uncharacterized LOC10369149028069699180712318Rat
9185104LOC103691500uncharacterized LOC10369150028078324480792403Rat
1595053LOC685395hypothetical protein LOC68539528083671480837319Rat
1589269LOC683212similar to keratin complex 1, acidic, gene 1828087826380879814Rat
11418901LOC10834997060S ribosomal protein L27 pseudogene28092006780921048Rat
1560828Dnah5dynein, axonemal, heavy chain 528094773081143997Rat
1560828Dnah5dynein, axonemal, heavy chain 528115906081337560Rat
11493112LOC108349969tubulin alpha-1C chain-like28131814081321598Rat
1593760LOC685499similar to MYST histone acetyltransferase 128156538081567407Rat
1593218LOC365720similar to BMP/retinoic acid-inducible neural-specific protein28162815981632045Rat
7603843LOC102551226uncharacterized LOC10255122628172254081739144Rat
7740519LOC102551357uncharacterized LOC10255135728200026582030519Rat
2322903LOC100360042ARP3 actin-related protein 3 homolog (yeast)-like28218230282183522Rat
1592059LOC361908similar to 40S ribosomal protein S1028227462582275183Rat
6488544LOC10091211140S ribosomal protein S19-like28234065082341155Rat
11519496LOC108350174endogenous retrovirus group K member 25 Pol protein-like28247397682475092Rat
7530586LOC102551810uncharacterized LOC10255181028286282782882446Rat
620734Ctnnd2catenin delta 228322724784094315Rat
7595026LOC102553378uncharacterized LOC10255337828361228883613687Rat
7671897LOC102553574uncharacterized LOC10255357428423991884242373Rat
620641Dapdeath-associated protein28427588484328998Rat
1564227Ankrd33bankyrin repeat domain 33B28436106184436912Rat
11505970LOC108349971uncharacterized LOC10834997128446621584483673Rat
1591367Ropn1lrhophilin associated tail protein 1-like28452042184531192Rat
7678070LOC102553736uncharacterized LOC10255373628453140384534742Rat
1565757Marchf6membrane associated ring-CH-type finger 628453354684608743Rat
1306952Cmblcarboxymethylenebutenolidase homolog28464508484666836Rat
735161Cct5chaperonin containing TCP1 subunit 528466757884678730Rat
1560629AtpsckmtATP synthase c subunit lysine N-methyltransferase28467889284694152Rat
2322522LOC100360228hypothetical LOC10036022828481804084819425Rat
620733Tas2r119taste receptor, type 2, member 11928530522585306232Rat
2323921LOC100362858hypothetical LOC10036285828531483985315170Rat
6502911LOC100909539uncharacterized LOC10090953928537414285377163Rat
1308650Sema5asemaphorin 5A28537731885808970Rat
9158335LOC103691501zinc finger protein 345-like28592692886463583Rat
1585655LOC683539similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2)28614065586140925Rat
11447466LOC108350175zinc finger protein 737-like28642569186435068Rat
6502425LOC100909688zinc finger protein 43-like28646872686559141Rat
6485043LOC100912995zinc finger protein 733-like28658575586588902Rat
6485085LOC100913005zinc finger protein 99-like28661557686902946Rat
11355185LOC108350176zinc finger protein 728 pseudogene28686824286869229Rat
2322273LOC100360380zinc finger protein 457-like28688080686922446Rat
11427226LOC108349972uncharacterized LOC10834997228691000386913443Rat
11457724LOC108349973zinc finger protein 728-like28695178986968928Rat
1559684Zfp458zinc finger protein 45828697112986980519Rat
628788Zfp455zinc finger protein 45528699677587011696Rat
1587849Rsl1regulator of sex limited protein 128701590487040788Rat
7564391LOC102548546zinc finger protein 709-like28708546187092882Rat
6501293LOC100909879tyrosine-protein phosphatase non-receptor type substrate 1-like28741842587419918Rat
1587814Sirpb2l1signal-regulatory protein beta 2-like 128752884787620311Rat
1587796LOC685979similar to Transducin-like enhancer protein 4 (Groucho-related protein 4) (Grg-4)28765712687668202Rat
1586682LOC686014similar to AP-2 complex subunit sigma-1 (Adapter-related protein complex 2 sigma-1 subunit) (Sigma-adaptin 3b) (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin ass...28767714287677583Rat
11418902LOC108349974uncharacterized LOC10834997428775422187782286Rat
1586670LOC686026similar to eukaryotic translation initiation factor 5A28795479287965583Rat
1563710LOC499565LRRGT0003828795736387970337Rat
2240Car2carbonic anhydrase 228809774088112868Rat
2241Ca3carbonic anhydrase 328812651988136063Rat
1309780Car1carbonic anhydrase 128818520488227486Rat
1560453Ca13carbonic anhydrase 1328828296188314254Rat
2320742LOC100361118hypothetical LOC10036111828831419888324356Rat
1565641Rbisribosomal biogenesis factor28833801888350785Rat
621357E2f5E2F transcription factor 528835076488366913Rat
628722Lrrcc1leucine rich repeat and coiled-coil centrosomal protein 128838479688414012Rat
1565475LOC361914similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228845379288553113Rat
1309208Slc7a12solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228855967788660449Rat
6498023LOC100910566solute carrier family 7 member 13-like28866835988669438Rat
11465292LOC108349975uncharacterized LOC10834997528869235788695245Rat
1589989LOC688389similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228874452788763968Rat
9148085LOC103691502U1 small nuclear ribonucleoprotein C pseudogene28903562889037495Rat
1305844RalylRALY RNA binding protein-like28903999089842784Rat
11380439LOC108349976eukaryotic translation initiation factor 1 pseudogene28934639189347397Rat
9412486LOC103691503RNA-binding Raly-like protein28949087589499635Rat
9470100LOC10369510660S ribosomal protein L34 pseudogene28967366789674975Rat
6496535LOC100910774uncharacterized LOC10091077428984295089844052Rat
1588876LOC688412similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase 1)28996727989968449Rat
6496250LOC100910852uncharacterized LOC10091085229021121490251921Rat
6496250LOC100910852uncharacterized LOC10091085229045948590582294Rat
2324778LOC100363110thioredoxin-like 429056943390994443Rat
1593216LOC365729similar to N-terminal acetyltransferase complex ARD1 subunit homolog A29056985790571294Rat
9304207LOC103691505uncharacterized LOC10369150529060514490615226Rat
9176013LOC103691504uncharacterized LOC10369150429062185790638028Rat
1588803LOC688485similar to heat shock protein 229106567491067564Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10319D2Mco4121227468492474685139Ratregion
10602D2Wox1318224654491746545070Ratregion
10924D2Mit318424326208743262270Ratregion
10925D2Wox1213224326205643262187Ratregion
11155D2Wox1418226032542960325610Ratregion
11156D2Mit2431026032535260325665Ratregion
33824D2Mit418826259494662595133Ratregion
34190D2Mgh1915028564251785642672Ratregion
34278D2Mgh1412024313349143133606Ratregion
34334D2Mgh2115025624467156244820Ratregion
34397D2Mgh213324017183440171978Ratregion
34425D2Mgh113423408817534088303Ratregion
34487D2Mgh330426353816363538449Ratregion
34514D2Mit3116523624786936248033Ratregion
33620D2Mit618927846607578466260Ratregion
33620D2Mit618927832141078321595Ratregion
33739D2Mit531826682804966828236Ratregion
36017D2Rat7413026996027169960400Ratregion
36071D2Rat1517024778394947784116Ratregion
36356D2Mit3318125377228953772469Ratregion
37274D2Rat13524928901132789011585Ratregion
37474D2Rat27620928427065984270863Ratregion
37558D2Rat11423523624522336245442Ratregion
35250D2Rat1313623786147937861614Ratregion
35272D2Rat1914025771560357715731Ratregion
35292D2Rat1817624106343941063603Ratregion
36850D2Rat2016026094635460946530Ratregion
36902D2Rat27017325443669854436870Ratregion
37018D2Rat1414224277691642777046Ratregion
37132D2Rat14412527882379778823927Ratregion
37664D2Rat16721527996964479969856Ratregion
36428D2Rat1018623496726934967461Ratregion
36470D2Rat1617024364373143643900Ratregion
36659D2Rat1713324867658448676716Ratregion
36693D2Rat7514228063195080632091Ratregion
34914D2Rat2317428922805789228238Ratregion
34914D2Rat2317427720259577202776Ratregion
35142D2Rat2212726924368669243798Ratregion
35643D2Rat2111327568749575687607Ratregion
35915D2Rat6117726886541468866454Ratregion
35941D2Rat1215423914143439141586Ratregion
39668D2Rat25424024411984144120092Ratregion
39828D2Rat20423527790421877904438Ratregion
39874D2Rat19814824314129043141453Ratregion
38064D2Rat15322024275896742759170Ratregion
40446D2Rat29815524462644644626598Ratregion
40470D2Rat29917026456594664566111Ratregion
40478D2Rat27723728442413984424363Ratregion
40560D2Rat27316327530755475307738Ratregion
40672D2Rat20220025250764552507805Ratregion
38476D2Rat14211124256669142566799Ratregion
38770D2Rat18421923970344639703664Ratregion
38770D2Rat18421923970312839703664Ratregion
40074D2Rat20713727390014473900284Ratregion
38950D2Rat17323724961570049615930Ratregion
39046D2Rat17522326043977460440000Ratregion
39170D2Rat17418226074605260746235Ratregion
39216D2Rat9521428439468884394897Ratregion
39370D2Rat21213828375490783755024Ratregion
39460D2Rat20012624918043949180560Ratregion
39512D2Rat21013828318756483187711Ratregion
42104D2Arb124023830587538306157Ratregion
42117D2Arb4223026569690465697149Ratregion
42119D2Arb633526032528260325636Ratregion
42121D2Arb715025834410058344252Ratregion
42287D2Rat37120727475059374750791Ratregion
41158D2Rat19724824017172540171984Ratregion
41188D2Rat20622226942918369429411Ratregion
41334D2Rat20117325026021050260392Ratregion
42560D2Rat26615324468436844684531Ratregion
42564D2Rat31210823923522939235334Ratregion
42566D2Rat26714124410059744100719Ratregion
42567D2Rat26924724490769344907939Ratregion
42569D2Rat31624025058083150581054Ratregion
42570D2Rat31412524965557949655697Ratregion
42571D2Rat31524124917132949171552Ratregion
42572D2Rat31821025224306652243258Ratregion
42573D2Rat38523325763308157633323Ratregion
42574D2Rat38614825824990258250100Ratregion
42575D2Rat31924225667284856673097Ratregion
42576D2Rat27114526131807961318215Ratregion
42577D2Rat32020726288104362881234Ratregion
42578D2Rat32223927408923074089466Ratregion
42579D2Rat32320727441698174417195Ratregion
42581D2Rat32412328405277784052877Ratregion
42582D2Rat32514328531832885318467Ratregion
42584D2Rat32724928615811386158367Ratregion
42585D2Rat32821028553621885536379Ratregion
40844D2Rat21120128390879083908992Ratregion
41000D2Rat20314927762806877628212Ratregion
41538D2Rat19913324117925541179397Ratregion
41758D2Rat27220027860717978607374Ratregion
41788D2Rat27520828381960883819822Ratregion
43463D2Got1422323590649635906723Ratregion
43464D2Got2119823786308237863289Ratregion
43465D2Got2018523786147437861662Ratregion
43466D2Got2328323712963237129923Ratregion
43467D2Got2414224151639541516536Ratregion
43468D2Got1918323764205337642223Ratregion
43469D2Got1717323999388839994060Ratregion
43470D2Got1819223912982539130016Ratregion
43471D2Got2223923904326739043505Ratregion
43472D2Got1613723880114038801276Ratregion
43473D2Got1511223511777835117879Ratregion
43488D2Got18217824310471243104889Ratregion
43488D2Got18217824310432743104889Ratregion
43489D2Got18118924292363942923824Ratregion
43490D2Got2715824468483244684986Ratregion
43491D2Got2819124573990145740090Ratregion
43492D2Wox516024641775846417913Ratregion
43493D2Got3112324641780346417925Ratregion
43494D2Got3210527637626376376367Ratregion
43495D2Got3027024557697145577240Ratregion
43497D18Got8228825341299753413284Ratregion
43499D18Got8327725649904256499318Ratregion
43500D2Got18314426701224267012385Ratregion
43501D2Got4421327119078271190994Ratregion
43502D2Got3624427943388479434127Ratregion
43503D2Got3812727927617879276304Ratregion
43505D2Got3712927965275579652883Ratregion
43507D2Wox2819028169201581692198Ratregion
43508D2Got4628628527143685271721Ratregion
43510D2Got3322928403548084035708Ratregion
43512D2Got4119728397045283970646Ratregion
43513D2Got4019727598409075984286Ratregion
60793D2Wox39224314978843149891Ratregion
60795D2Wox49124314971943149811Ratregion
60750D2Rat31711224108829141088396Ratregion
60319D2Got2511824137729741377414Ratregion
60320D2Got3413027766734877667477Ratregion
60324D2Got4719126976603169766220Ratregion
67827D2Uwm2910726175438661754465Ratregion
61289D2Mco1920023923642339236609Ratregion
62472D2Uia228525437928654379561Ratregion
66383D2Mco4227524527827345278541Ratregion
66432D9Mco728526922423269224582Ratregion
66537D12Uia227026017016560170434Ratregion
66651D2Mco1219428281848082818694Ratregion
66652D2Mco1323124585364045853885Ratregion
66656D2Mco1517423589954935899729Ratregion
66659D2Mco1714327589611275896315Ratregion
66661D2Mco1813928063195380632096Ratregion
66701D2Mco2720124092443440924648Ratregion
66701D2Mco2720124092426540924648Ratregion
67253D2Arb225124326207943262329Ratregion
67254D2Arb314824654491946545066Ratregion
67256D2Arb533025454863554548964Ratregion
67257D2Arb828025875942158759700Ratregion
67322D2Arb3121524940255949402773Ratregion
67749D2Uwm3022626301173563011983Ratregion
67750D2Uwm3119728096499280965184Ratregion
67801D2Uwm1837824917116749171658Ratregion
1578818D2Chm22921325250170652501918Ratregion
1578821D2Chm14924325330237653302618Ratregion
1630515D2Ulb819928089097780891175Ratregion
1630785D2Got36615125145380851453898Ratregion
1630785D2Got36615125145374851453898Ratregion
1630974D2Got31411926212872562128838Ratregion
1631348D2Ulb1627427997567979975952Ratregion
1631518D2Wox507224511236045112431Ratregion
1632178D2Got31222425796215557962378Ratregion
1632235D2Got30926025205352452053783Ratregion
1578914D2Chm29624427339498573395228Ratregion
1578947D2Chm28022126017731460177534Ratregion
1579018D2Chm27822325672373856723960Ratregion
1579021D2Chm17225028076201980762268Ratregion
1579033D2Chm19124325651001056510252Ratregion
1579094D2Chm27722725673640156736627Ratregion
1579096D2Chm19214925620792856208076Ratregion
1579111D2Chm29424126841641368416653Ratregion
1579114D2Chm29924227461119674611437Ratregion
1579141D2Chm23315825504082955040986Ratregion
1579189D2Chm14521725003205250032268Ratregion
1627859D2Got39728626346969463469979Ratregion
1627922D2Got36528525530597955306263Ratregion
1627969D2Got30710825116324651163353Ratregion
1628202D2Wox2913625924272759242862Ratregion
1628294D2Got40119426211481962115007Ratregion
1628467D2Got39428125601162256011900Ratregion
1629043D2Got31617726097218660972362Ratregion
1629111D2Got30513324979629749796426Ratregion
1629148D2Got3778325660115356601235Ratregion
1629260D2Got38426525702350957023773Ratregion
1629874D2Got38527625601162656011899Ratregion
1638566D2Got43126325281475552815022Ratregion
1638566D2Got43126325273540152735664Ratregion
1638587D5Wox661924698550346986121Ratregion
1639066D2Wox6323624531336245519Ratregion
1639116D2Ulb634326452894464529286Ratregion
1639711D2Got41918925545991055460095Ratregion
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5504922Isl16824848801248488079Ratregion
5501460D9S5527025804793658048205Ratregion
5501460D9S5527025739869057398959Ratregion
5501620REN122C19023794333037944390Ratregion
5501844MARC_15693-15694:1017691889:161923428332234283940Ratregion
5501974MARC_21512-21513:1032982746:3101325724917357250185Ratregion
5506678REN2860924024326678843267027Ratregion
5502799MIER322524329113843291362Ratregion
5502293RH12430311224306851943068630Ratregion
5502415RH124784027513504675135240Ratregion
Position Markers

Flank 1: (D2Mgh1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2235,134,841 - 35,134,970 (+)MAPPER
Rnor_6.0234,088,175 - 34,088,303NCBI
Rnor_5.0253,216,438 - 53,216,566UniSTS
RGSC_v3.4234,914,943 - 34,915,072RGD
RGSC_v3.4234,914,944 - 34,915,072UniSTS
RGSC_v3.1234,835,312 - 34,835,441RGD
Celera231,110,695 - 31,110,827UniSTS
RH 3.4 Map2126.7UniSTS
RH 3.4 Map2126.7RGD
RH 2.0 Map2189.6RGD
SHRSP x BN Map215.0498RGD
FHH x ACI Map223.0699RGD
Cytogenetic Map2q13UniSTS
Peak: (D2Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2261,582,123 - 61,582,311 (+)MAPPER
Rnor_6.0262,594,946 - 62,595,133NCBI
Rnor_5.0282,093,558 - 82,093,745UniSTS
Celera257,114,745 - 57,114,932UniSTS
RH 2.0 Map2346.3RGD
Cytogenetic Map2q16UniSTS
Flank 2: (D2Mit7)
Rat AssemblyChrPosition (strand)Source
Celera2112,353,051 - 112,353,195RGD
RH 3.4 Map2 RGD
RH 3.4 Map2 UniSTS
SHRSP x BN Map2 RGD
SHRSP x BN Map2 UniSTS
Cytogenetic Map2 RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2135167060Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141179397Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)23127638105149020Rat
9590080Insglur4Insulin/glucose ratio QTL 428.70.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)2368630848686308Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2541733642777046Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2789360052893600Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)2944467949615930Rat
1578671Bmd10Bone mineral density QTL 105.4femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)2944467968866454Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21055527555555275Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21423783059237830Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)216679272245624402Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21901646564016465Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22027698165276981Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22064137165641371Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22261295267612952Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22328064775687607Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)223837491149614623Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22618609783819822Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226186097135654963Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226186097142053534Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22626799543133606Rat
1643006Pain1Pain QTL 13.630.005mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)22626799548676716Rat
12879841Cm87Cardiac mass QTL 870.026heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)227161361148295267Rat
12879842Cm88Cardiac mass QTL 880.042heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)227161361148295267Rat
12879843Am3Aortic mass QTL 30.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)227161361148295267Rat
12879844Kidm62Kidney mass QTL 620.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227161361148295267Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22776030172760301Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22872786752507805Rat
731179Mamtr3Mammary tumor resistance QTL 30.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)23122461243643900Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23127237976272379Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23408817591101903Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23513320280133202Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)236245223112175725Rat
9685065Swd6Spike wave discharge measurement QTL 65.80.01brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge rate (CMO:0001739)23899084849401197Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240171834105089682Rat
12879863Bp402Blood pressure QTL 4020.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24106343956736627Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24277691662238534Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916169852800Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916195645082Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243133606217498545Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243133606217498545Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243141290114164944Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243141290114164944Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243141290154583160Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight as a percentage of body weight (CMO:0000654)24314978885642672Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243149788198704485Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246537589217498710Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25443669875687607Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256244671217498710Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)25673640160325686Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)25771560378466260Rat
6480225Gdil1Gastrointestinal dilation QTL 1enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)25834410075687607Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)260131410135646395Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)260325352106432915Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)260325352106432915Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)260325352147522851Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)260325686105059293Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)261924251106924251Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828049217498710Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828236243550655Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)26886541480632096Rat
1581576Pur7Proteinuria QTL 70.0001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)26886541480632096Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)268865414169852800Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)26886645480631953Rat
1581578Cm49Cardiac mass QTL 494.90.01heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)268866454149614466Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)270132175115132175Rat
2317041Aia14Adjuvant induced arthritis QTL 143.29joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)271495404116495404Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)27568749596556760Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27568749596556760Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)275687495221880419Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)27832141079969856Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)278321410105089682Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)278321410105089682Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278321410158159410Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278321410217498710Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)280631950149614623Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)282574487127574487Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)283656855128656855Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283754907237610852Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283819608239166203Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283819608243901375Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)284424139132130578Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Edpm1

RGD Curation Notes
Note Type Note Reference
qtl_general exhibits a negative additive effect on mass by the BN allele by forming a two-locus model with Edpm2 which spans 55 cM 61074
qtl_general region exhibits dominance by the BN allele 61074