Coatc8 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Coatc8 (Coat color QTL 8) Rattus norvegicus

Symbol: Coatc8
Name: Coat color QTL 8
RGD ID: 10755436
Trait: coat/hair pigmentation trait   (VT:0010463)    
Measurement Type: pigmented ventral coat/hair area to total ventral coat/hair area ratio   (CMO:0001812)    
LOD Score: LRS=7.4
P Value: 0.02431
Variance: 5.0
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2235,023,117 - 80,023,117RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0235,133,202 - 80,133,202RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0256,617,887 - 101,617,887RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4235,535,310 - 80,535,310RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: AR-Ednrbsl/Hkv LE/Hkv.AR-Ednrbsl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain

References

References - curated
1. Huang J, etal., Sci Rep. 2016 Jan 22;6:19697. doi: 10.1038/srep19697.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68401Gzmkgranzyme K24484081144848829Rat
2322Cdh6cadherin 626207913962225228Rat
619958Pdzd2PDZ domain containing 226138461461770516Rat
3281Pde4dphosphodiesterase 4D24001493341529190Rat
2238C6complement C625384602753921279Rat
61957Isl1ISL LIM homeobox 124807941248090704Rat
70970Hmgcs13-hydroxy-3-methylglutaryl-CoA synthase 125164936851667100Rat
70974Kif2akinesin family member 2A23836799838431237Rat
619741Cdh10cadherin 1026862862368850995Rat
3196Npr3natriuretic peptide receptor 326086548360933432Rat
2633Fstfollistatin24612326046130584Rat
619937Ccl28C-C motif chemokine ligand 2825160135451625999Rat
3387Prkaa1protein kinase AMP-activated catalytic subunit alpha 125424029854275978Rat
3407Prlrprolactin receptor25913414759324719Rat
2677Gdnfglial cell derived neurotrophic factor25689399256919935Rat
2687Ghrgrowth hormone receptor25254145252804960Rat
2923Itga1integrin subunit alpha 124664612546812237Rat
621007Dab2DAB adaptor protein 225551469255567476Rat
621226Golph3golgi phosphoprotein 326134803061376051Rat
620688Hcn1hyperpolarization-activated cyclic nucleotide-gated potassium channel 124949577149899702Rat
621431LifrLIF receptor subunit alpha25622439356292988Rat
68345Hspb3heat shock protein family B (small) member 324529528545295999Rat
620760Plk2polo-like kinase 224196917641974945Rat
621832Plpp1phospholipid phosphatase 124443900244500430Rat
620450Spef2sperm flagellar 225851248958694718Rat
628640Gzmagranzyme A24474063844752471Rat
621632Itga2integrin subunit alpha 224652034546621487Rat
2606Fgf10fibroblast growth factor 1025080189750875428Rat
620923Rab3cRAB3C, member RAS oncogene family24162772041843541Rat
621582Sub1SUB1 regulator of transcription26100564661020486Rat
621587Trim23tripartite motif-containing 2323530240535335746Rat
621067Embembigin24907050949125042Rat
620966Map3k1mitogen-activated protein kinase kinase kinase 124334857243414706Rat
621729Dnajc21DnaJ heat shock protein family (Hsp40) member C2125941950559446743Rat
621199Nup155nucleoporin 15525720131057252918Rat
621767Agxt2alanine-glyoxylate aminotransferase 225933625259377664Rat
727976Sgtbsmall glutamine rich tetratricopeptide repeat co-chaperone beta23523304535269527Rat
2903Il6stinterleukin 6 cytokine family signal transducer24406597944106255Rat
1305805Card6caspase recruitment domain family, member 625419434354206902Rat
621518Nlnneurolysin23513363435232927Rat
3048Amacralpha-methylacyl-CoA racemase25994615859958255Rat
628641Ptger4prostaglandin E receptor 425433056354347451Rat
620319C9complement C925557309455621345Rat
1306809Nadk2NAD kinase 2, mitochondrial25811767458159815Rat
620318C7complement C725408811654165102Rat
1305010C1qtnf3C1q and TNF related 325991709959939519Rat
1307506Gpx8glutathione peroxidase 824467644844680042Rat
1305799Depdc1bDEP domain containing 1B23989116339963779Rat
1306393NipblNIPBL, cohesin loading factor25739944357586770Rat
1305813Fbxl7F-box and leucine-rich repeat protein 727713977577509223Rat
71013Esm1endothelial cell-specific molecule 124487606744884805Rat
621491Basp1brain abundant, membrane attached signal protein 127581613075863801Rat
1306592EgflamEGF-like, fibronectin type III and laminin G domains25630194556476665Rat
1307323Adamts12ADAM metallopeptidase with thrombospondin type 1 motif, 1226003287360327629Rat
2845Htr1a5-hydroxytryptamine receptor 1A23669417436695442Rat
3660Selenopselenoprotein P25249812352508409Rat
1302983Osmroncostatin M receptor25590711955961373Rat
1307580Fbxo4F-box protein 425317479853187792Rat
1308508Brix1biogenesis of ribosomes BRX125945060859461486Rat
1306583Trappc13trafficking protein particle complex subunit 1323527049335302049Rat
1306690Slc45a2solute carrier family 45, member 225996359959996408Rat
1307735Ankrd55ankyrin repeat domain 5524388387743983820Rat
1307193Myo10myosin X27610096276304164Rat
1305984MtrexMtr4 exosome RNA helicase24450032644560624Rat
1305413Mroh2bmaestro heat-like repeat family member 2B25400387054063992Rat
3698Slc1a3solute carrier family 1 member 325775549557830605Rat
1307224RictorRPTOR independent companion of MTOR, complex 225581187755903893Rat
1310204Ppwd1peptidylprolyl isomerase domain and WD repeat containing 123533730135360661Rat
1309146Zfp622zinc finger protein 62227647960576494405Rat
1309776Il7rinterleukin 7 receptor25845239358477757Rat
1310461Cenpkcentromere protein K23536013235421372Rat
1310367Snx18sorting nexin 1824523232545258345Rat
1311550Rxfp3relaxin family peptide receptor 326000325660004686Rat
1308360Triotrio Rho guanine nucleotide exchange factor27850506978801384Rat
1307626Droshadrosha ribonuclease III26186488661976688Rat
1309697Mrps30mitochondrial ribosomal protein S3025045625350463128Rat
1311881Slc38a9solute carrier family 38, member 924429163744374897Rat
1311890Zfrzinc finger RNA binding protein26113761161200322Rat
1311570Ercc8ERCC excision repair 8, CSA ubiquitin ligase complex subunit23964739339686229Rat
1311752Dimt1DIM1 rRNA methyltransferase and ribosome maturation factor23834308638366760Rat
1560402RGD1560402similar to Phosphoglycerate kinase 124275460542755929Rat
1305668Paip1poly(A) binding protein interacting protein 125152314251550241Rat
1310697Cwc27CWC27 spliceosome associated cyclophilin23576467435975908Rat
1305938RGD1305938similar to expressed sequence AW54987725318978753203981Rat
1305942Rai14retinoic acid induced 1425954628459682687Rat
1310560Elovl7ELOVL fatty acid elongase 723978922939858579Rat
1308793Ddx4DEAD-box helicase 424422794644282867Rat
1310081Cplane1ciliogenesis and planar polarity effector 125726919557369580Rat
1305492Gpbp1GC-rich promoter binding protein 124302350443091146Rat
1306227RGD1306227similar to 4833420G17Rik protein25155322351577090Rat
1309487Wdr70WD repeat domain 7025695134557191244Rat
1307638Zfp131zinc finger protein 13125172277451753662Rat
1307559Ranbp3lRAN binding protein 3-like25805788758113158Rat
1306496Rad1RAD1 checkpoint DNA exonuclease25946159759469707Rat
1306502RGD1306502similar to hypothetical protein FLJ1119326184871661864762Rat
1307678Adamts6ADAM metallopeptidase with thrombospondin type 1 motif, 623542148335633305Rat
1305430Cdh18cadherin 1827281807673820144Rat
1306624Zswim6zinc finger, SWIM-type containing 623921113139378877Rat
1308776Capslcalcyphosine-like25839499558425527Rat
1308343Cdh9cadherin 926628042266367121Rat
1308448Plcxd3phosphatidylinositol-specific phospholipase C, X domain containing 325356702253746384Rat
1309504Actbl2actin, beta-like 224285802042860767Rat
1305356Srek1ip1SREK1-interacting protein 123597604535999630Rat
1307902Mtmr12myotubularin related protein 1226122371461293266Rat
1309360Rgs7bpregulator of G-protein signaling 7 binding protein23613394436231505Rat
1562302LOC499530hypothetical protein LOC49953024855717048566072Rat
1311241Mier3MIER family member 324328754643316422Rat
1560462RGD1560462similar to ribosomal protein L10a23719203637193479Rat
1560484RGD1560484similar to ribosomal protein L425498492954986241Rat
1564928Ttc23ltetratricopeptide repeat domain 23-like25947666659538313Rat
1563920Lmbrd2LMBR1 domain containing 225818955858251565Rat
1562936RGD1562936similar to Heat shock protein HSP 90-beta (HSP 84)27212525172129162Rat
1564606RGD1564606similar to 60S ribosomal protein L23a23845281438453384Rat
1562550Tmem267transmembrane protein 26725158021051588937Rat
1564672Shisal2bshisa like 2B23600262236019529Rat
1561503Ccdc152coiled-coil domain containing 15225250798752532880Rat
1561520RGD1561520similar to Ab2-16225139226551393293Rat
1565217Ccnocyclin O24463064044633914Rat
1359591Pelopelota mRNA surveillance and ribosome rescue factor24679785346799621Rat
1565003Retreg1reticulophagy regulator 127633560976474817Rat
1560158Ndufaf2NADH:ubiquinone oxidoreductase complex assembly factor 223953568039647378Rat
1562952Erbinerbb2 interacting protein23492696235028440Rat
1564042Ttc33tetratricopeptide repeat domain 3325427990654326851Rat
1563421Fyb1FYN binding protein 125562158555781206Rat
1561161Cspg4bchondroitin sulfate proteoglycan 4B24493980745008284Rat
1563766LOC499542LRRGT0017826072684860735185Rat
1311133Ipo11importin 1123816968838342929Rat
1563205OtulinlOTU deubiquitinase with linear linkage specificity like27840599478433860Rat
1564125RGD1564125similar to Cln5 protein26589349565902741Rat
619925AnkhANKH inorganic pyrophosphate transport regulator27815302778280181Rat
1560001LOC499544LRRGT0015426097731561004442Rat
1560076RGD1560076similar to 60S ribosomal protein L29 (P23)23972034939720914Rat
1560828Dnah5dynein, axonemal, heavy chain 527893778879255551Rat
1308116Nim1kNIM1 serine/threonine protein kinase25167076451714782Rat
1562456Skp2S-phase kinase associated protein 225816122658189293Rat
1561906RGD1561906similar to RIKEN cDNA 4930430F0827298438872986671Rat
1585807LOC680982hypothetical protein LOC68098226567090865672736Rat
1583285Hspd1-ps25heat shock protein 1, pseudogene 2527460975074613329Rat
1359477Mocs2molybdenum cofactor synthesis 224650457446516327Rat
1565852LOC499541LRRGT0004526066714160673354Rat
1584008Oxct13-oxoacid CoA transferase 125323637053384715Rat
1586478Il31rainterleukin 31 receptor A24411874844189943Rat
1587383LOC294776similar to ets variant gene 525487215354875943Rat
1587384Parp8poly (ADP-ribose) polymerase family, member 824867940548848700Rat
1566344RGD1566344similar to eukaryotic translation elongation factor 1 alpha 125353051053547324Rat
1566350Cdh12cadherin 1227047467971705369Rat
1584143Cdc20bcell division cycle 20B24468834944738056Rat
1584164Mcidasmulticiliate differentiation and DNA synthesis associated cell cycle protein24463658144643730Rat
1564365Ugt3a2UDP glycosyltransferase 3 family, polypeptide A225832705858350186Rat
1559945Marchf11membrane associated ring-CH-type finger 1127689833076999690Rat
1589753LOC310177similar to RIKEN cDNA 0610040D2027601663676017401Rat
1589594LOC502504similar to CG11883-PB, isoform B23624601036326648Rat
1592966LOC680363hypothetical protein LOC68036326045263060453393Rat
1593760LOC685499similar to MYST histone acetyltransferase 127948501279486383Rat
1587346Nntnicotinamide nucleotide transhydrogenase25141141351505125Rat
1586190LOC294831similar to ubiquitin-conjugating enzyme E2R 226955210069554245Rat
1592273LOC689489similar to DnaJ-like protein 224996595249971527Rat
1592324LOC689438similar to ribonucleic acid binding protein S124918239849183276Rat
1583619LOC679871hypothetical protein LOC67987125810144858102404Rat
1359527Tars1threonyl-tRNA synthetase 126036825160387733Rat
1585493LOC686105similar to solute carrier family 25, member 524210259442103565Rat
1583588LOC681102similar to synaptosomal-associated protein 23 isoform SNAP23B26760413067609584Rat
1586621GaptGrb2-binding adaptor protein, transmembrane24192753341932120Rat
1589269LOC683212similar to keratin complex 1, acidic, gene 1827891040078911742Rat
1593219LOC365713similar to 60S ribosomal protein L927660246676603113Rat
1593220LOC365709similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin e126941461569417238Rat
1596656LOC682635similar to CG31855-PA27382393973841395Rat
1594499LOC365693similar to Nuclear protein SkiP (Ski-interacting protein) (SNW1 protein) (Nuclear receptor coactivator NCoA-62)25674032056741899Rat
1594500LOC365692similar to ribosomal protein S925658228856582972Rat
1594504LOC365673similar to microfibrillar-associated protein 124689250046893901Rat
1594505LOC365671similar to Protein CGI-11724540489145406036Rat
1594163LOC680268hypothetical protein LOC68026826066996860670245Rat
1596810LOC680078hypothetical protein LOC68007825831491258327069Rat
1595140LOC685308similar to Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific transplantation 84 kDa antigen) (TSTA)27763955877641665Rat
1594378LOC499538similar to non-POU domain containing, octamer-binding25738143957382974Rat
1594380Ndufs4NADH:ubiquinone oxidoreductase subunit S424595132746061829Rat
1594381LOC499522similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI)23692858836929161Rat
1595053LOC685395hypothetical protein LOC68539527886883578869411Rat
1595064Rnf180ring finger protein 18023633028536511168Rat
1597407Arl15ADP-ribosylation factor like GTPase 1524543822145822562Rat
2318781LOC100362101hypothetical LOC10036210124331935943322764Rat
2318290LOC100362397ubiquitin-conjugating enzyme E2L 3-like27644003676441113Rat
2319559Rps15al4ribosomal protein S15A-like 425443754454438039Rat
2318361Dhx29DExH-box helicase 2924456065344611450Rat
2322829LOC100363518hypothetical LOC10036351825290706352909893Rat
2322932LOC100360013ubiquitin-associated protein 226600754266009900Rat
2323229LOC100363314hypothetical protein LOC10036331425175256851765798Rat
2323466LOC100359774hypothetical LOC10035977426393638763937165Rat
2323519LOC100359721hypothetical LOC10035972126359223363595295Rat
2323540LOC100359700eukaryotic translation initiation factor 1-like24539105545392369Rat
2324334LOC100362624biliverdin reductase A-like24553851845540448Rat
4888547Mir449cmicroRNA 449c24466917944669277Rat
2324500OtulinOTU deubiquitinase with linear linkage specificity27829043778316633Rat
2325413Mir582microRNA 58224092857140928651Rat
2323951LOC100362827high-mobility group nucleosomal binding domain 2-like25761869057618983Rat
2325536Mir449amicroRNA 449a24467071444670804Rat
2324086LOC100362772ribosomal protein S12-like25761507957615691Rat
2324713LOC100363177ferritin light chain 1-like26154356361544581Rat
2324600Smim15small integral membrane protein 1523952825639533416Rat
6492359LOC100911520killer cell lectin-like receptor 5-like26421267264217862Rat
6494071LOC100911298heterogeneous nuclear ribonucleoprotein M-like27649878076500974Rat
6495770LOC100911004heterogeneous nuclear ribonucleoprotein A1-like25729338457298637Rat
6504200LOC100909396uncharacterized LOC10090939626182809661830209Rat
7497849LOC102548571uncharacterized LOC10254857125245354252486117Rat
7523639LOC102554929uncharacterized LOC10255492927510102975109556Rat
7505957LOC102553625uncharacterized LOC10255362526877889068939928Rat
7534134LOC102550255uncharacterized LOC10255025525516220155180537Rat
7512922LOC102556362uncharacterized LOC10255636225159536651601133Rat
7503607LOC10254829539S ribosomal protein L40, mitochondrial-like25946985759471850Rat
7517146LOC102546512uncharacterized LOC10254651223852728838537176Rat
7503935LOC10255077060S ribosomal protein L21-like25602493656025455Rat
7662910LOC102552232uncharacterized LOC10255223226576716665819676Rat
7662935LOC102553734uncharacterized LOC10255373426898029469020038Rat
7637192LOC102551224heterogeneous nuclear ribonucleoprotein R-like24433760744340578Rat
7637193LOC10255257060S ribosomal protein L29-like24747080547471791Rat
7655727LOC102554147uncharacterized LOC10255414727215668172198344Rat
7643568LOC102547847uncharacterized LOC10254784725206884452075436Rat
7570025LOC102548637uncharacterized LOC10254863725280511752812142Rat
7557368LOC102556643uncharacterized LOC10255664325192915351940031Rat
7603843LOC102551226uncharacterized LOC10255122627963411579641114Rat
7606174LOC102554307uncharacterized LOC10255430724364744143693619Rat
7567660LOC102547360uncharacterized LOC10254736025163178951640783Rat
7567902LOC102549347uncharacterized LOC10254934723950006339528170Rat
41054385LOC120101168U6 spliceosomal RNA26108224061082346Rat
7691404LOC102557105MLV-related proviral Env polyprotein-like24903190549036174Rat
7736543LOC102554057uncharacterized LOC10255405724349634343504404Rat
7751753LOC102546727uncharacterized LOC10254672723897359938994374Rat
7672686LOC102548891AKT-interacting protein-like23505758135059009Rat
7695496LOC102556361uncharacterized LOC10255636123761814037642341Rat
7683682LOC102553935uncharacterized LOC10255393524342026843436706Rat
7724377LOC102554146septin-7-like25393384753941923Rat
7740519LOC102551357uncharacterized LOC10255135727988846379939230Rat
7667725LOC102554526heterogeneous nuclear ribonucleoprotein A3-like27324733073249760Rat
7700687LOC102548142uncharacterized LOC10254814225217956352183483Rat
9137783LOC103691475uncharacterized LOC10369147525438126754427711Rat
9150057LOC103691449uncharacterized LOC10369144923913897439167216Rat
9151583LOC103691446uncharacterized LOC10369144623719043137463186Rat
9193186LOC103691468uncharacterized LOC10369146825196693351972303Rat
9200405LOC103691481uncharacterized LOC10369148125770176757704913Rat
9201190LOC103691453activated RNA polymerase II transcriptional coactivator p15 pseudogene24329894943300263Rat
9208714LOC103691456uncharacterized LOC10369145624389251943954354Rat
9353912LOC103691494annexin-2 receptor-like25186121051861735Rat
9243561LOC103691473V-type proton ATPase subunit e 1 pseudogene25285185152852085Rat
9387191LOC103691483uncharacterized LOC10369148325973429159747359Rat
9362373LOC103695100uncharacterized LOC10369510026207365762085399Rat
9428698LOC103691472uncharacterized LOC10369147225251723252536035Rat
9429209LOC103691486uncharacterized LOC10369148627481148974842763Rat
9469491LOC103691462serine/arginine-rich splicing factor 3 pseudogene24412959044130630Rat
9436047LOC103691451uncharacterized LOC10369145124272675242733899Rat
9476424LOC103691460putative 60S ribosomal protein L39-like 524747242447472576Rat
9411836LOC103691459uncharacterized LOC10369145924630205646347633Rat
9453411LOC103691452uncharacterized LOC10369145224283068542950401Rat
11359058LOC10834996760S ribosomal protein L7a pseudogene27636625476367092Rat
11449327LOC108349941uncharacterized LOC10834994123877523038811284Rat
11474944LOC108349945uncharacterized LOC10834994524526939345274138Rat
11474953LOC10835016760S ribosomal protein L17 pseudogene24753795647538570Rat
11445903LOC108350231uncharacterized LOC10835023127481003074811049Rat
11356949LOC10835015540S ribosomal protein S6 pseudogene25664481656655429Rat
11451820LOC108349943uncharacterized LOC10834994324158493541590024Rat
11371833LOC10834994960S ribosomal protein L15 pseudogene25151420551515270Rat
11452971LOC108349942uncharacterized LOC10834994223903661239069876Rat
11453461LOC108350230glyceraldehyde-3-phosphate dehydrogenase pseudogene26273716662738204Rat
11413279LOC108349939uncharacterized LOC10834993923861681938657106Rat
11418901LOC10834997060S ribosomal protein L27 pseudogene27895282078953229Rat
11419093LOC108350211uncharacterized LOC10835021123984997239855243Rat
11386721LOC108350173charged multivesicular body protein 5 pseudogene27598867576005457Rat
11387679LOC108349948uncharacterized LOC10834994824793105447941984Rat
11388086LOC10834995960S ribosomal protein L23-like25753907957542026Rat
11378089LOC108350169glyceraldehyde-3-phosphate dehydrogenase-like25309889553100054Rat
11378090LOC10835022960S ribosomal protein L17 pseudogene25984172659842316Rat
11403233LOC108349968uncharacterized LOC10834996827632408476333964Rat
11382166LOC108349962uncharacterized LOC10834996225783544257840143Rat
11382661LOC108349957uncharacterized LOC10834995725631680056349595Rat
11511747LOC108350170glyceraldehyde-3-phosphate dehydrogenase pseudogene26084791860848940Rat
11487276LOC108350210uncharacterized LOC10835021024102007441032958Rat
11493630LOC10835017160S ribosomal protein L7a pseudogene26242432862430752Rat
41111255LOC120100737E3 SUMO-protein ligase KIAA1586-like25853208058540473Rat
41136923LOC120100756tubulin alpha-1C chain-like27923675079237720Rat
41137062LOC120101105U2 spliceosomal RNA27770271777702836Rat
41167126LOC120100700uncharacterized LOC12010070023939181139400380Rat
41235092LOC120100733uncharacterized LOC12010073325562890155632966Rat
41276753LOC120100740uncharacterized LOC12010074025960122159605292Rat
41381356LOC120093165uncharacterized LOC12009316525202302952027944Rat
41113370LOC120101138U6 spliceosomal RNA23552861635528722Rat
41168070LOC120101349small nucleolar RNA SNORA1724997342749973549Rat
41168552NEWGENE_6576114transfer RNA threonine (anticodon AGU)24599777145997843Rat
41204573LOC120100702uncharacterized LOC12010070223949465539499673Rat
41250842LOC120100745uncharacterized LOC12010074526853932368628612Rat
41324318LOC120100741uncharacterized LOC12010074126001648260032748Rat
41357925LOC12010099860S ribosomal protein L6-like26813098468132284Rat
41141093LOC120100722uncharacterized LOC12010072225187453551883271Rat
41279240LOC120100703uncharacterized LOC12010070324305524743055771Rat
41358011LOC120100987heterogeneous nuclear ribonucleoprotein A1-like25016131450162965Rat
41384167LOC120100561ubiquitin-conjugating enzyme E2 N-like26977182569772236Rat
41090942LOC120100755uncharacterized LOC12010075527818296378184031Rat
41172051LOC120100725uncharacterized LOC12010072525197693651989635Rat
41206868LOC120100999glyceraldehyde-3-phosphate dehydrogenase-like27533303175333975Rat
41207236LOC120100736uncharacterized LOC12010073625810997758118986Rat
41207854LOC120101081uncharacterized LOC12010108124106008041067591Rat
41253562LOC120100713uncharacterized LOC12010071324538796445393370Rat
41287396NEWGENE_40933816transfer RNA valine (anticodon AAC)27284242772842507Rat
41117892LOC120101248small nucleolar RNA SNORA4424661684846616952Rat
41173629LOC120100749uncharacterized LOC12010074927631401276334295Rat
41328657LOC120101363small nucleolar RNA SNORD7225421716054217239Rat
41093744LOC120100752uncharacterized LOC12010075227726901677284684Rat
41261285LOC120101395U1 spliceosomal RNA27406126874061423Rat
41178063LOC12010056360S ribosomal protein L7a-like27551842375523313Rat
41178470LOC120100559uncharacterized LOC12010055925877866258796834Rat
41213139LOC120100718uncharacterized LOC12010071824648879546493298Rat
41213451LOC120101199U6 spliceosomal RNA25175073951750849Rat
41394010LOC120093056ribosomal protein L3725421535254217429Rat
41123498LOC120101245small nucleolar RNA SNORA4427044660770446735Rat
41180045LOC120101302small nucleolar RNA SNORA1727347496673475097Rat
41191856LOC120101085uncharacterized LOC12010108526102048861021424Rat
41213703LOC12010055760S ribosomal protein L29-like23971531539716074Rat
41213708LOC120101118U2 spliceosomal RNA25692982556930018Rat
41265315LOC120100699uncharacterized LOC12010069923892561638943051Rat
41265375LOC120101296small nucleolar RNA SNORA1725407619354076322Rat
41266421LOC120100704uncharacterized LOC12010070424338422243413501Rat
41343784LOC120101265small nucleolar RNA SNORA4825127413651274279Rat
41368707LOC120101082uncharacterized LOC12010108224106763841091014Rat
41124508LOC120100991annexin-2 receptor-like25205838852059000Rat
41156512LOC120100754uncharacterized LOC12010075427817275178179652Rat
41156848LOC120101369U6atac minor spliceosomal RNA25282301252823132Rat
41288964LOC120100698uncharacterized LOC12010069823886524538876526Rat
41345329LOC120100729small nuclear ribonucleoprotein G-like25429780354301899Rat
41396312LOC120100697uncharacterized LOC12010069723866775238693190Rat
41397082LOC120100738uncharacterized LOC12010073825862629358669887Rat
41182925LOC120100730uncharacterized LOC12010073025433683354341457Rat
41269108LOC120100988annexin-2 receptor-like25191837451918968Rat
41347556LOC120101080uncharacterized protein C11orf98 homolog23561335735613723Rat
41102832LOC120101346small nucleolar RNA SNORA1727094241070942533Rat
41103209LOC120100723annexin-2 receptor-like25200046852001148Rat
41127911LOC120100739non-POU domain-containing octamer-binding protein-like25875832858760040Rat
41160333LOC120100727uncharacterized LOC12010072725215394452162355Rat
41184907LOC120101260small nucleolar RNA SNORA4825946698059467107Rat
41185079LOC120101129U4 spliceosomal RNA24814008348140209Rat
41292358LOC120100719uncharacterized LOC12010071925159452351596329Rat
41348725LOC120101157U6 spliceosomal RNA23858377138583877Rat
41399437LOC120100710uncharacterized LOC12010071024506283845068931Rat
41072327LOC120101185U6 spliceosomal RNA24682793846828043Rat
41196546LOC120100753uncharacterized LOC12010075327726176677268562Rat
41196986LOC120101348small nucleolar RNA SNORA1726516063165160712Rat
41350418Shld3shieldin complex subunit 323529495635301865Rat
41374960LOC120100726uncharacterized LOC12010072625210296052107722Rat
41400978LOC120100747uncharacterized LOC12010074727214718872156686Rat
41230892LOC120101390U1 spliceosomal RNA27517905275179214Rat
41272581Lrrc70leucine rich repeat containing 7023821350838231099Rat
41294127LOC120100743ubiquitin-associated protein 2-like26600528266007542Rat
41401973LOC120100716uncharacterized LOC12010071624574321645773022Rat
41402336LOC120100724uncharacterized LOC12010072425194594851952730Rat
41403201LOC120101087uncharacterized LOC12010108727050893070511875Rat
41081966NEWGENE_40926764transfer RNA proline (anticodon AGG)24319849743198577Rat
41164131LOC120100705uncharacterized LOC12010070524343872443442856Rat
41231663LOC120100995dipeptidyl peptidase 3-like26429759364432049Rat
41232314LOC12010099660S ribosomal protein L13-like26459573764596270Rat
41232818LOC120100714uncharacterized LOC12010071424532182745369348Rat
41274238LOC120093149uncharacterized LOC12009314925203387852045558Rat
41404161LOC120100992annexin-2 receptor-like25216521252165896Rat
41083925LOC120101290small nucleolar RNA SNORA1725377859953778725Rat
41109932LOC120100706uncharacterized LOC12010070624404788844057753Rat
41132845LOC120101181U6 spliceosomal RNA24403425044034357Rat
41232980LOC120100748uncharacterized LOC12010074827537125875412938Rat
41010767LOC120100712uncharacterized LOC12010071224516406845188903Rat
40973599LOC12010098660S ribosomal protein L32-like24509889445099915Rat
40954385LOC120101342small nucleolar RNA SNORA1723644024536440364Rat
40928086LOC120101219U7 small nuclear RNA27664811376648175Rat
40980049LOC120100993high mobility group protein B1-like25535979355406351Rat
40930512LOC120100715uncharacterized LOC12010071524533384945344756Rat
40930809LOC120100708uncharacterized LOC12010070824500810145013288Rat
40932300LOC120101123small nucleolar RNA U324981712849817210Rat
40934801LOC120100627protein dpy-30 homolog25952263859526672Rat
40962450LOC120101086uncharacterized LOC12010108626132407061330556Rat
40941042LOC120100734uncharacterized LOC12010073425722934357230048Rat
40991465LOC120100717uncharacterized LOC12010071724612810946130571Rat
40992083LOC120100750uncharacterized LOC12010075027678800976854838Rat
40942807LOC120101187U6 spliceosomal RNA24799928247999387Rat
40993190NEWGENE_40933816transfer RNA valine (anticodon AAC)24060367340603753Rat
40994045LOC12010073560S ribosomal protein L9-like25739033357399288Rat
40994990LOC120100997protein crumbs homolog 3-like26800073868003782Rat
40995943LOC120100742uncharacterized LOC12010074226558793765606771Rat
41047976LOC120100990annexin-2 receptor-like25205628752056881Rat
41074866LOC120100728coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like25241448352418437Rat
41242421LOC120100989annexin-2 receptor-like25200256852003181Rat
41024273LOC120101084uncharacterized LOC12010108424131450641320081Rat
41024443LOC120101173U6 spliceosomal RNA26280651762806619Rat
41048152LOC120100731uncharacterized LOC12010073125453591354549230Rat
41077530LOC120101211small nucleolar RNA SNORD3625147495151475023Rat
41319327LOC120100732uncharacterized LOC12010073225557598655580855Rat
41029337LOC12010069540S ribosomal protein S29-like23574579835764518Rat
41030574LOC120100694uncharacterized LOC12010069423509379335099838Rat
41135571LOC120100560uncharacterized LOC12010056026902009469020818Rat
41332544LOC120100558uncharacterized LOC12010055825292745152929546Rat
41144197LOC120101125U4 spliceosomal RNA25642213356422274Rat
41056389LOC120101320small nucleolar RNA SNORA1727767562177675749Rat
41152499LOC120100720uncharacterized LOC12010072025171595651722569Rat
41335676LOC120100744serine hydrolase RBBP9-like26867700268677554Rat
41056682LOC120100625peptidyl-prolyl cis-trans isomerase FKBP3-like25642709656427708Rat
41315512LOC120100562RNA-binding protein FUS-like27413938274141230Rat
41337111LOC120100721NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like25176779751768492Rat
41337724LOC120100746uncharacterized LOC12010074626865085668670949Rat
41036237LOC120100985egl nine homolog 1-like23974837339749980Rat
41235450LOC120101111U2 spliceosomal RNA25079720950797380Rat
41066036LOC120101289small nucleolar RNA SNORA1726034044160340572Rat
41235934LOC120100751uncharacterized LOC12010075127724835477260551Rat
41237332LOC120101366U1 spliceosomal RNA27426084874261011Rat
41041387LOC120100626mitochondrial cardiolipin hydrolase-like25702950057031550Rat
41305934LOC120100709uncharacterized LOC12010070924502713745050955Rat
41019158LOC120100701uncharacterized LOC12010070123943749039446872Rat
41068271LOC120100707uncharacterized LOC12010070724441967844426375Rat
41308381LOC120100711prefoldin subunit 2-like24512485645125320Rat
41308577LOC120101083uncharacterized LOC12010108324027851940287658Rat
41240399LOC120101337small nucleolar RNA SNORA1725528960555289731Rat
41241035LOC120100994UDP-glucuronosyltransferase 3A1-like25838571458389680Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10319D2Mco4121227381172573811941Ratregion
10602D2Wox1318224613067246130826Ratregion
10924D2Mit318424328333143283515Ratregion
10925D2Wox1213224328330043283432Ratregion
11155D2Wox1418225932445459324636Ratregion
11156D2Mit2431025932437759324691Ratregion
33824D2Mit418826158212361582311Ratregion
34278D2Mgh1412024315456643154682Ratregion
34334D2Mgh2115025604303156043181Ratregion
34397D2Mgh213324006794440068089Ratregion
34425D2Mgh113423513484135134970Ratregion
34487D2Mgh330426251660962516896Ratregion
34514D2Mit3116523669541436695579Ratregion
33620D2Mit618927653932276539510Ratregion
33739D2Mit531826611827566118463Ratregion
36017D2Rat7413026917384469173974Ratregion
36071D2Rat1517024713789847138066Ratregion
36356D2Mit3318125314797553148156Ratregion
35250D2Rat1313623808169038081826Ratregion
35272D2Rat1914025760561257605741Ratregion
35292D2Rat1817624112578941125954Ratregion
36850D2Rat2016025994328659943463Ratregion
36902D2Rat27017325382274753822920Ratregion
37018D2Rat1414224280460742804738Ratregion
37132D2Rat14412527689708576897216Ratregion
37664D2Rat16721527799114877991361Ratregion
36428D2Rat1018623602318436023379Ratregion
36470D2Rat1617024366500843665178Ratregion
36659D2Rat1713324826852848268661Ratregion
36693D2Rat7514227866561678665758Ratregion
35142D2Rat2212726846286068462973Ratregion
35643D2Rat2111327478666474786777Ratregion
35941D2Rat1215423937437639374529Ratregion
39668D2Rat25424024390765543907909Ratregion
39828D2Rat20423527613654776136768Ratregion
39874D2Rat19814824316236643162530Ratregion
38064D2Rat15322024278647942786683Ratregion
40446D2Rat29815524440524444405397Ratregion
40470D2Rat29917026353190063532066Ratregion
40560D2Rat27316327441756774417754Ratregion
40672D2Rat20220025172913951729300Ratregion
38476D2Rat14211124259119142591300Ratregion
38770D2Rat18421924034027540340327Ratregion
38770D2Rat18421924034010640340593Ratregion
38770D2Rat18421924034010640340327Ratregion
40074D2Rat20713727305587573056016Ratregion
38950D2Rat17323724900313349003364Ratregion
39046D2Rat17522325943983459440061Ratregion
39170D2Rat17418225974481759745001Ratregion
39460D2Rat20012624877318548773307Ratregion
42104D2Arb124023852858938528872Ratregion
42117D2Arb4223026499184564992091Ratregion
42119D2Arb633525932430759324662Ratregion
42121D2Arb715025666087956661032Ratregion
42287D2Rat37120727387824373878442Ratregion
41158D2Rat19724824006783540068095Ratregion
41188D2Rat20622226864256868642799Ratregion
41334D2Rat20117324965706949657252Ratregion
42560D2Rat26615324445797644458140Ratregion
42564D2Rat31210823946200539462111Ratregion
42566D2Rat26714124388870143888824Ratregion
42567D2Rat26924724468070444680951Ratregion
42569D2Rat31624024997620649976429Ratregion
42570D2Rat31412524904333549043454Ratregion
42571D2Rat31524124876408448764308Ratregion
42572D2Rat31821025146482951465022Ratregion
42573D2Rat38523325752299657523239Ratregion
42575D2Rat31924225646919956469449Ratregion
42576D2Rat27114526030523460305371Ratregion
42577D2Rat32020726185874561858937Ratregion
42578D2Rat32223927324535973245596Ratregion
42579D2Rat32320727355816973558384Ratregion
41000D2Rat20314927585924275859387Ratregion
41538D2Rat19913324124396341244106Ratregion
41758D2Rat27220027668044076680636Ratregion
44552D9Wox2113627919041979190476Ratregion
44552D9Wox2113627196810571968162Ratregion
44552D9Wox2113625038964950389703Ratregion
44552D9Wox2113623740565337405710Ratregion
43463D2Got1422323750492237505150Ratregion
43464D2Got2119823808329338083501Ratregion
43465D2Got2018523808168538081874Ratregion
43466D2Got2328323751261037512902Ratregion
43467D2Got2414224157675441576896Ratregion
43468D2Got1918323785178437851955Ratregion
43469D2Got1717323988474239884915Ratregion
43470D2Got1819223936291339363105Ratregion
43471D2Got2223923927635739276596Ratregion
43472D2Got1613723903305739033194Ratregion
43473D2Got1511223617934336179445Ratregion
43488D2Got18217824312578443125962Ratregion
43488D2Got18217824312539943125962Ratregion
43489D2Got18118924294670342946889Ratregion
43490D2Got2715824445844044458595Ratregion
43491D2Got2819124550883445509022Ratregion
43492D2Wox516024600308546003241Ratregion
43493D2Got3112324600313046003253Ratregion
43494D2Got3210527548632275486427Ratregion
43495D2Got3027024534852745348797Ratregion
43497D18Got8228825280399952804287Ratregion
43499D18Got8327725629810056298377Ratregion
43500D2Got18314426630034766300491Ratregion
43501D2Got4421327036780870368021Ratregion
43502D2Got3624427750311977503363Ratregion
43503D2Got3812727734517377345300Ratregion
43505D2Got3712927772448077724609Ratregion
43507D2Wox2819027960689479607078Ratregion
43513D2Got4019727508870075088897Ratregion
60793D2Wox39224317101743171121Ratregion
60795D2Wox49124317094843171041Ratregion
60750D2Rat31711224115006841150174Ratregion
60319D2Got2511824143647241436590Ratregion
60320D2Got3413027590413575904265Ratregion
60324D2Got4719126898344468983634Ratregion
67827D2Uwm2910726073165260731732Ratregion
61289D2Mco1920023946319939463386Ratregion
62472D2Uia228525376493453765210Ratregion
66383D2Mco4227524505084645051115Ratregion
66432D9Mco728526844340268443753Ratregion
66537D12Uia227025917270459172974Ratregion
66652D2Mco1323124562330245623550Ratregion
66656D2Mco1517423651947736519658Ratregion
66659D2Mco1714327499775974997963Ratregion
66661D2Mco1813927866561978665763Ratregion
66701D2Mco2720124098677640986991Ratregion
66701D2Mco2720124098660740986991Ratregion
67253D2Arb225124328332343283574Ratregion
67254D2Arb314824613067446130822Ratregion
67256D2Arb533025393205553932385Ratregion
67257D2Arb828025842920558429485Ratregion
67322D2Arb3121524879506048795275Ratregion
67749D2Uwm3022626198885061989099Ratregion
67750D2Uwm3119727899766278997855Ratregion
67801D2Uwm1837824876392248764414Ratregion
1578818D2Chm22921325172320051723413Ratregion
1578821D2Chm14924325269296752693212Ratregion
1630515D2Ulb819927892342178923620Ratregion
1630785D2Got36615124791932247919475Ratregion
1630974D2Got31411926111683761116951Ratregion
1631348D2Ulb1627427799718577997459Ratregion
1631518D2Wox507224488403444884106Ratregion
1632178D2Got31222425785740057857624Ratregion
1632235D2Got30926025127402751274287Ratregion
1578914D2Chm29624427255502672555272Ratregion
1578947D2Chm28022125917985359180074Ratregion
1578984D3Chm23824725482583354826080Ratregion
1579018D2Chm27822325651925256519473Ratregion
1579021D2Chm17225027879433478794584Ratregion
1579033D2Chm19124325630906856309311Ratregion
1579094D2Chm27722725653191256532139Ratregion
1579096D2Chm19214925600608156006230Ratregion
1579111D2Chm29424126771746367717704Ratregion
1579114D2Chm29924227374444373744685Ratregion
1579141D2Chm23315825442309754423255Ratregion
1579189D2Chm14521724942610749426326Ratregion
1627859D2Got39728626244281862443104Ratregion
1627922D2Got36528525464204154642326Ratregion
1627969D2Got30710825057717150577279Ratregion
1628202D2Wox2913625875755058757686Ratregion
1628294D2Got40119426110233161102520Ratregion
1628467D2Got39428125580970855809987Ratregion
1629043D2Got31617725996910259969279Ratregion
1629111D2Got30513324918819649188326Ratregion
1629260D2Got38426525703039757030664Ratregion
1629874D2Got38527625580971255809986Ratregion
1638587D5Wox661924650911346509732Ratregion
1639711D2Got41918925524981755250003Ratregion
1632736D2Got32014726404621364046360Ratregion
1632808D2Ulb714925979644859796597Ratregion
1633230D2Got31922226443107164431288Ratregion
1633292D2Got40630025409503254095332Ratregion
1633572D2Got30428024754160747541887Ratregion
1639805D2Got31329525710294157103236Ratregion
1639820D2Got42912424794441247944537Ratregion
1639964D2Got31117925249934652499525Ratregion
1640402D2Got42519925658592756586126Ratregion
1640402D2Got42519925658592756586126Ratregion
1635435D2Got31711826358755263587670Ratregion
1635998D2Got30619924900261349002812Ratregion
1636242D2Got38027725996340259963675Ratregion
1636716D2Got37619725580971255809907Ratregion
1636843D2Got30823725714186357142100Ratregion
1636921D2Got32110727548631975486426Ratregion
1637376D2Got31510726027751160277618Ratregion
1633796D2Got38112027858043978580561Ratregion
1633960D2Got30216324536012445360287Ratregion
1634123D2Got31019525750176157501956Ratregion
1634602D2Got37411723589967635899811Ratregion
7192180Prlr12025930626159306381Ratregion
7206386fb98c02.x1109224114448941145581Ratregion
7206440Dab297725556589655566873Ratregion
5035753D5S242212425590373055903854Ratregion
5035787PMC17879P158326093163460932217Ratregion
5035795PMC186328P118724808613348086320Ratregion
5038880RH12738621925995793659958155Ratregion
5038952RH12742718924467662944676818Ratregion
5036761AU04911917026382061163820781Ratregion
5036855AU04942318627813367778133863Ratregion
5036889AU04952519624144973041449926Ratregion
5037031AU04998217126202042162020592Ratregion
5035542Mrpl40025947112759471615Ratregion
5035721WI-2146725324302403543024288Ratregion
5033855RH14037116327850521078505373Ratregion
5025966RH13038520324523187845232081Ratregion
5028735STS-AA00978116027649421376494373Ratregion
5026322RH13176718024664623946646419Ratregion
5026438RH13221220325630275156302954Ratregion
5031980AU04648423625465825554658489Ratregion
5026612RH13287322025432652954326749Ratregion
5029241RH14404912127853262778532748Ratregion
5032072AU02910816925370274853702919Ratregion
5032303AU01706313724467672144676858Ratregion
5032307AI85126111525317510353175218Ratregion
5026954RH13416921624593840645938622Ratregion
5027089IB167116224197466241974824Ratregion
5029663BF38677320825166785351668061Ratregion
5032475D15Ertd600e20627630395576304161Ratregion
5032619RH13467421825167086851671086Ratregion
5029953BF40012520025866911958669319Ratregion
5035318BM38701619723936273739362934Ratregion
5027483AI5042999225780811557808207Ratregion
5027571SHGC-6475717425434552654345700Ratregion
5033011RH13727221225629267556292887Ratregion
5027685SGC3418012525555543455555559Ratregion
5033095RH13757517127612891976129090Ratregion
5025128RH12660820627829279878293004Ratregion
5030659BI30169816025717937057179530Ratregion
5033609RH13944913725146283951462976Ratregion
5025646RH129115023968424639684430Ratregion
5025710RH12936120326119980461200010Ratregion
5030937BF3995509224544004145440133Ratregion
5028565AA98641717225254173352541905Ratregion
5031065BE11560315424456123844561392Ratregion
5031139BE11613215125140460351404754Ratregion
5054867RH14347117625731049257310668Ratregion
5054873RH14347421825778815057788368Ratregion
5055073RH14359012727861816778618294Ratregion
5053449RH14265514027829305478293194Ratregion
5055853RH14404018323533606735336250Ratregion
5056307RH14430320823925285539253063Ratregion
5054157RH14306325025384722353847473Ratregion
5054203RH14308926525730172357301988Ratregion
5054213RH14309529523550926435509559Ratregion
5054285RH14313621126100731961007530Ratregion
5054299RH14314415025319050853190658Ratregion
5056843RH14461315124990211949902270Ratregion
5057231D2Uwm4024712581647126054Ratregion
5059496BE09707620723633029636330503Ratregion
5059508BE09713815024437569344375843Ratregion
5055501RH14383811527647337576473490Ratregion
5057920BF38630715424573812945738283Ratregion
5056031RH14414313824192808041928218Ratregion
5055103RH14360726325816172358161986Ratregion
5056289RH14429214427820429878204442Ratregion
5056369RH14433910324597915745979260Ratregion
5058766BF38706315524990055249900707Ratregion
5058794BI27801919625717781057178006Ratregion
5059666BE09757621723525574535255962Ratregion
5056521RH14442611523579690435797019Ratregion
5058146BF38669819923573309335733292Ratregion
5056777RH14457416423952743739527601Ratregion
5055497RH14383527827877444678774724Ratregion
5052667RH14219616325254257452542736Ratregion
5058904BF38720915125172935151729502Ratregion
5059806BI28544116223935671739356879Ratregion
5059950BF38820419325808475558084948Ratregion
5059170BI27851916824343917143439339Ratregion
5053335RH14258911825725577757255895Ratregion
5053373RH14261113423563098235631116Ratregion
5053689RH14279411927850624078506359Ratregion
5053827RH14287312125281186552811986Ratregion
5049834RH13370819527713995477140148Ratregion
5050042RH13382918325556713555567318Ratregion
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5052565AA58950825926793198967932248Ratregion
5050260RH13395318024582089445821074Ratregion
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505166913.MMHAP86FRE7.seq18524114118641141371Ratregion
5054695RH14337217225739977757399949Ratregion
5051000RH13438020527630980976310014Ratregion
5043454RH13003518823599936335999551Ratregion
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5087995Map3k118524334880943348994Ratregion
5088060Prlr13525929089759291032Ratregion
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5085258AW53275016724152864441528811Ratregion
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5085842BM38290715223513501335135165Ratregion
5083881AI01065111623953379139533907Ratregion
5502801MYO1013627629371776293853Ratregion
5507507ECD0947662024331578443316404Ratregion
5503458GDNF_315047625691674556917221Ratregion
5507641Ddx4165924424700444248663Ratregion
5507666Ghr10025255176852552167Ratregion
5504304D10S1272E19724433872444338921Ratregion
5504809ha2145027888226678882787Ratregion
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5505500D1S284289825242276052423658Ratregion
5504444PMC208779P159024424700444247594Ratregion
5504480PMC22098P152226093092960931451Ratregion
5505128Krt1876327891069078911453Ratregion
5505128Krt1876327891062078911453Ratregion
5505654UniSTS:488481155824192783441929393Ratregion
5506029NM_1942839325941952659419619Ratregion
5506915G4794025523940154439401799Ratregion
5506467G1600124225080192750802169Ratregion
5506674REN2846526124331604643316307Ratregion
5506676REN2847124124331486143315102Ratregion
5506670REN2800522824341375043413978Ratregion
5506672REN2835725424334939943349653Ratregion
5506789G4539624027596796975968209Ratregion
5507223UniSTS:22534416525075831750758482Ratregion
5500139UniSTS:23711320824884081848841026Ratregion
5501988MARC_21845-21846:1025102921:176525748300657483771Ratregion
5500362GDB:33540916925776772057767887Ratregion
5500787stSG625181136024331485943316219Ratregion
5500789stSG625182108124331379843314879Ratregion
5500791stSG625183113824331268043313818Ratregion
5500903RP_L37_191225421647554217387Ratregion
5500957MARC_9941-9942:996688685:2024332104643321420Ratregion
5503534HCN1__670186124989887449899735Ratregion
5504922Isl16824807971648079784Ratregion
5501460D9S5527025797253357972803Ratregion
5501620REN122C19023816007038161096Ratregion
5501844MARC_15693-15694:1017691889:161923533042335331042Ratregion
5501974MARC_21512-21513:1032982746:3101325724384857244861Ratregion
5506678REN2860924024328803243288272Ratregion
5502799MIER322524331238443312609Ratregion
5502293RH12430311224308942843089540Ratregion
5502415RH124784027424650474246699Ratregion
Position Markers

Peak: (D2Rat385)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2257,522,996 - 57,523,239 (+)MAPPER
Rnor_6.0257,633,081 - 57,633,323NCBI
Rnor_5.0279,117,766 - 79,118,008UniSTS
RGSC_v3.4258,035,189 - 58,035,432RGD
RGSC_v3.4258,035,190 - 58,035,432UniSTS
RGSC_v3.1257,963,354 - 57,963,967RGD
Celera253,136,745 - 53,136,987UniSTS
SHRSP x BN Map224.0998RGD
SHRSP x BN Map224.0998UniSTS
Cytogenetic Map2q16UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)21185206249003364Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22691781781754745Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22699957143154682Rat
1643006Pain1Pain QTL 13.630.005mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)22699957148268661Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22715716072157160Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22997159351729300Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
731179Mamtr3Mammary tumor resistance QTL 30.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)23237377043665178Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23513484188029593Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240067944102785628Rat
12879863Bp402Blood pressure QTL 4020.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24112578956532139Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24280460760653831Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243162366111362592Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24317101783575226Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25382274774786777Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)25653191259324719Rat
6480225Gdil1Gastrointestinal dilation QTL 1enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)25666087974786777Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)25760561276539510Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)259134147127460910Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)259324377103795077Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)259324377103795077Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)259324377141596857Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)259324719102755241Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)259846005104846005Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)264366971109366971Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)267942638112942638Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)272532993157142209Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27478666494359546Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)27478666494359546Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)27653932277991361Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)276539322102785628Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)276539322102785628Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)276539322150540526Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)278665616143657569Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software used: Map Maker QTXb20 10755346
qtl_general number of animals used: 149 F2 animals 10755346
qtl_general measurement method: Dorsal and ventral sides were photographed and pigmented and non-pigmented areas traced manually; percentage of pigmented area calculated (pigmented area/total area X 100) for dorsal, ventral and total body surface 10755346