Fxr1 (FMR1 autosomal homolog 1) - Rat Genome Database

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Gene: Fxr1 (FMR1 autosomal homolog 1) Rattus norvegicus
Analyze
Symbol: Fxr1
Name: FMR1 autosomal homolog 1
RGD ID: 1311733
Description: Predicted to enable RNA binding activity; protein dimerization activity; and translation regulator activity. Predicted to be involved in several processes, including positive regulation of response to DNA damage stimulus; regulation of filopodium assembly; and regulation of gene expression. Predicted to be located in several cellular components, including costamere; perinuclear region of cytoplasm; and ribonucleoprotein granule. Predicted to be part of polysome. Predicted to be active in several cellular components, including dendrite; glutamatergic synapse; and postsynaptic density. Orthologous to human FXR1 (FMR1 autosomal homolog 1); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; 2,6-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: fragile X mental retardation gene 1, autosomal homolog; fragile X mental retardation syndrome-related protein 1; fragile X mental retardation, autosomal homolog 1; Fxr1h; LOC100366044; LOC361927; rCG41429-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22116,884,167 - 116,937,586 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl2116,884,248 - 116,937,590 (+)Ensembl
Rnor_6.02120,529,716 - 120,570,356 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2120,512,899 - 120,570,355 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02140,165,289 - 140,213,149 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42120,330,045 - 120,378,482 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12120,275,008 - 120,323,418 (+)NCBI
Celera2111,923,546 - 111,975,799 (+)NCBICelera
Cytogenetic Map2q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,6-tribromophenol  (ISO)
2,6-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (EXP,ISO)
aristolochic acid  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (EXP)
carbon nanotube  (ISO)
cisplatin  (ISO)
cobalt dichloride  (EXP,ISO)
copper(II) sulfate  (ISO)
decabromodiphenyl ether  (ISO)
dicrotophos  (ISO)
dieldrin  (EXP)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
finasteride  (EXP)
flutamide  (EXP)
folic acid  (ISO)
furan  (EXP)
glafenine  (EXP)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
methylmercury chloride  (ISO)
Monobutylphthalate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
nefazodone  (EXP)
paracetamol  (ISO)
phenethyl isothiocyanate  (EXP)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:7489725   PMID:11178106   PMID:12477932   PMID:15128702   PMID:15489334   PMID:15548538   PMID:17057366   PMID:17170008   PMID:19946888   PMID:22022532   PMID:22658674   PMID:22681889  
PMID:27770568   PMID:29101288   PMID:29476059   PMID:30361391   PMID:31831836   PMID:32333305  


Genomics

Comparative Map Data
Fxr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22116,884,167 - 116,937,586 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl2116,884,248 - 116,937,590 (+)Ensembl
Rnor_6.02120,529,716 - 120,570,356 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2120,512,899 - 120,570,355 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02140,165,289 - 140,213,149 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42120,330,045 - 120,378,482 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12120,275,008 - 120,323,418 (+)NCBI
Celera2111,923,546 - 111,975,799 (+)NCBICelera
Cytogenetic Map2q24NCBI
FXR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383180,912,670 - 180,982,753 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl3180,868,141 - 180,982,753 (+)EnsemblGRCh38hg38GRCh38
GRCh373180,630,458 - 180,700,541 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363182,113,146 - 182,177,644 (+)NCBINCBI36hg18NCBI36
Build 343182,113,163 - 182,177,036NCBI
Celera3179,062,664 - 179,132,978 (+)NCBI
Cytogenetic Map3q26.33NCBI
HuRef3178,034,321 - 178,104,537 (+)NCBIHuRef
CHM1_13180,593,505 - 180,663,825 (+)NCBICHM1_1
T2T-CHM13v2.03183,714,436 - 183,784,535 (+)NCBI
Fxr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39334,074,133 - 34,124,129 (+)NCBIGRCm39mm39
GRCm39 Ensembl334,074,092 - 34,124,471 (+)Ensembl
GRCm38334,020,058 - 34,069,980 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl334,019,943 - 34,070,322 (+)EnsemblGRCm38mm10GRCm38
MGSCv37333,919,001 - 33,968,267 (+)NCBIGRCm37mm9NCBIm37
MGSCv36334,211,657 - 34,260,887 (+)NCBImm8
Celera333,916,172 - 33,965,473 (+)NCBICelera
Cytogenetic Map3A3NCBI
Fxr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554209,903,736 - 9,966,100 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554209,903,736 - 9,966,100 (+)NCBIChiLan1.0ChiLan1.0
FXR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13186,119,331 - 186,187,126 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v03177,948,040 - 178,012,705 (+)NCBIMhudiblu_PPA_v0panPan3
FXR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13414,129,978 - 14,192,016 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3414,130,017 - 14,191,370 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3418,212,277 - 18,274,019 (+)NCBI
ROS_Cfam_1.03414,031,339 - 14,093,392 (+)NCBI
ROS_Cfam_1.0 Ensembl3414,031,378 - 14,093,391 (+)Ensembl
UMICH_Zoey_3.13414,077,460 - 14,139,011 (+)NCBI
UNSW_CanFamBas_1.03414,059,493 - 14,121,524 (+)NCBI
UU_Cfam_GSD_1.03414,303,530 - 14,365,583 (+)NCBI
Fxr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602110,795,745 - 110,866,441 (+)NCBI
SpeTri2.0NW_0049365662,354,301 - 2,425,140 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FXR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13118,839,338 - 118,900,138 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113118,839,314 - 118,899,804 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213128,089,495 - 128,175,102 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FXR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1158,420,789 - 8,486,681 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl158,421,654 - 8,486,384 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606317,252,536 - 17,318,234 (-)NCBIVero_WHO_p1.0
Fxr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473058,680,030 - 58,743,229 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462473058,679,945 - 58,743,688 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
RH123299  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.02140,184,741 - 140,185,213NCBIRnor5.0
RGSC_v3.42120,358,866 - 120,359,337UniSTSRGSC3.4
Celera2111,952,036 - 111,952,507UniSTS
Cytogenetic Map2q25UniSTS
RH132222  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22116,932,491 - 116,932,685 (-)MAPPERmRatBN7.2
Rnor_6.02120,516,718 - 120,516,911NCBIRnor6.0
Rnor_5.02140,162,560 - 140,162,753UniSTSRnor5.0
RGSC_v3.42120,379,472 - 120,379,665UniSTSRGSC3.4
Celera2111,971,786 - 111,971,979UniSTS
RH 3.4 Map2683.6UniSTS
Cytogenetic Map2q25UniSTS
X90875  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.02140,158,874 - 140,159,032UniSTSRnor5.0
Rnor_5.02140,165,423 - 140,165,581UniSTSRnor5.0
Celera2111,975,507 - 111,975,665UniSTS
Cytogenetic Map2q25UniSTS
RH139070  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22116,924,570 - 116,924,704 (-)MAPPERmRatBN7.2
Rnor_6.02120,530,350 - 120,530,483NCBIRnor6.0
Rnor_5.02140,173,143 - 140,173,276UniSTSRnor5.0
Celera2111,963,863 - 111,963,996UniSTS
RH 3.4 Map2684.9UniSTS
Cytogenetic Map2q25UniSTS
BI274570  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22116,935,372 - 116,936,240 (-)MAPPERmRatBN7.2
Rnor_6.02120,519,947 - 120,520,151NCBIRnor6.0
Rnor_6.02120,513,163 - 120,514,030NCBIRnor6.0
Rnor_5.02140,159,005 - 140,159,872UniSTSRnor5.0
Rnor_5.02140,165,554 - 140,165,758UniSTSRnor5.0
Celera2111,974,667 - 111,975,534UniSTS
RH 3.4 Map116.7UniSTS
Cytogenetic Map2q25UniSTS
BI281166  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.02120,520,007 - 120,520,204NCBIRnor6.0
Rnor_5.02140,165,614 - 140,165,811UniSTSRnor5.0
RH 3.4 Map116.7UniSTS
Cytogenetic Map2q25UniSTS
UniSTS:479111  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.02120,520,193 - 120,520,822NCBIRnor6.0
Rnor_5.02140,165,800 - 140,166,429UniSTSRnor5.0
Cytogenetic Map2q25UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)259134147127460910Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)259324377141596857Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)272532993157142209Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)276539322150540526Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)278665616143657569Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)280270434125270434Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)281018907126018907Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)282345893130923501Rat
7207808Bmd89Bone mineral density QTL 894.1femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)288862519133862519Rat
2300165Bmd49Bone mineral density QTL 494.80.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)288862519133862519Rat
2300170Bmd45Bone mineral density QTL 4512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)288862519133862519Rat
2300185Bmd46Bone mineral density QTL 468.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)288862519133862519Rat
1598862Glom9Glomerulus QTL 93.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)292337601137337601Rat
1598863Cm65Cardiac mass QTL 652.3heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)292337601137337601Rat
631566Bp90Blood pressure QTL 900.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2102803808147803808Rat
8662836Vetf8Vascular elastic tissue fragility QTL 80.66thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2104559726149559726Rat
1581552Pur12Proteinuria QTL 125.190.0009total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)2112103657148076632Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2112456140212696837Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2112456140212696837Rat
1354594Despr10Despair related QTL 100.00000249locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2114654253159654253Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2114837527143657569Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2114837527143657569Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2114837527185876470Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2114837527185876470Rat
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2114837675212549332Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:13
Count of miRNA genes:13
Interacting mature miRNAs:13
Transcripts:ENSRNOT00000074060
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000088442   ⟹   ENSRNOP00000069834
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2116,884,257 - 116,936,504 (+)Ensembl
Rnor_6.0 Ensembl2120,512,899 - 120,570,355 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000101775   ⟹   ENSRNOP00000084548
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2116,884,248 - 116,937,590 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000102612   ⟹   ENSRNOP00000095711
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2116,884,251 - 116,936,347 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000103508   ⟹   ENSRNOP00000081168
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2116,884,248 - 116,937,590 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000117973   ⟹   ENSRNOP00000084892
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2116,905,868 - 116,932,847 (+)Ensembl
RefSeq Acc Id: NM_001012179   ⟹   NP_001012179
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.22116,884,258 - 116,936,505 (+)NCBI
Rnor_6.02120,529,716 - 120,570,356 (-)NCBI
Rnor_5.02140,165,289 - 140,213,149 (-)NCBI
RGSC_v3.42120,330,045 - 120,378,482 (+)RGD
Celera2111,923,546 - 111,975,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039102580   ⟹   XP_038958508
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.22116,884,167 - 116,937,586 (+)NCBI
RefSeq Acc Id: XM_039102581   ⟹   XP_038958509
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.22116,884,167 - 116,936,507 (+)NCBI
RefSeq Acc Id: XM_039102582   ⟹   XP_038958510
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.22116,884,167 - 116,937,586 (+)NCBI
RefSeq Acc Id: XM_039102583   ⟹   XP_038958511
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.22116,884,167 - 116,937,475 (+)NCBI
RefSeq Acc Id: XM_039102584   ⟹   XP_038958512
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.22116,884,167 - 116,937,586 (+)NCBI
RefSeq Acc Id: XM_039102585   ⟹   XP_038958513
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.22116,884,167 - 116,936,507 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_001012179   ⟸   NM_001012179
- UniProtKB: Q5XI81 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000069834   ⟸   ENSRNOT00000088442
RefSeq Acc Id: XP_038958508   ⟸   XM_039102580
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038958512   ⟸   XM_039102584
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038958510   ⟸   XM_039102582
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038958511   ⟸   XM_039102583
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038958509   ⟸   XM_039102581
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038958513   ⟸   XM_039102585
- Peptide Label: isoform X6
RefSeq Acc Id: ENSRNOP00000084892   ⟸   ENSRNOT00000117973
RefSeq Acc Id: ENSRNOP00000081168   ⟸   ENSRNOT00000103508
RefSeq Acc Id: ENSRNOP00000084548   ⟸   ENSRNOT00000101775
RefSeq Acc Id: ENSRNOP00000095711   ⟸   ENSRNOT00000102612
Protein Domains
Agenet-like   KH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5XI81-F1-model_v2 AlphaFold Q5XI81 1-568 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Strain Variation

Strain Sequence Variants (MRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311733 AgrOrtholog
BioCyc Gene G2FUF-53396 BioCyc
Ensembl Genes ENSRNOG00000051480 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000069834 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOP00000081168 ENTREZGENE
  ENSRNOP00000084548 ENTREZGENE
  ENSRNOP00000095711 ENTREZGENE
Ensembl Transcript ENSRNOT00000088442 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOT00000101775 ENTREZGENE
  ENSRNOT00000102612 ENTREZGENE
  ENSRNOT00000103508 ENTREZGENE
Gene3D-CATH 3.30.1370.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7109902 IMAGE-MGC_LOAD
InterPro Agenet-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FMR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FMRP_KH0 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FXMRP1_C_core UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FXR_C1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tudor_FRX1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:361927 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94858 IMAGE-MGC_LOAD
NCBI Gene 361927 ENTREZGENE
PANTHER PTHR10603 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Agenet UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FXMRP1_C_core UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FXR_C1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tudor_FRX1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fxr1 PhenoGen
PROSITE AGENET_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_TYPE_1 UniProtKB/Swiss-Prot
SMART SM00322 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54791 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JWD2_RAT UniProtKB/TrEMBL
  A0A3G2LW22_RAT UniProtKB/TrEMBL
  FXR1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Fxr1  FMR1 autosomal homolog 1  LOC100366044  rCG41429-like  Data Merged 737654 PROVISIONAL
2016-02-24 Fxr1  FMR1 autosomal homolog 1  Fxr1  fragile X mental retardation, autosomal homolog 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-07-09 Fxr1  fragile X mental retardation, autosomal homolog 1  Fxr1  fragile X mental retardation gene 1, autosomal homolog  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-01-17 Fxr1  fragile X mental retardation gene 1, autosomal homolog  Fxr1  fragile X mental retardation, autosomal homolog 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-06 LOC100366044  rCG41429-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-03-04 Fxr1  fragile X mental retardation, autosomal homolog 1  Fxr1h  fragile X mental retardation gene 1, autosomal homolog  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Fxr1h  fragile X mental retardation gene 1, autosomal homolog  Fxr1h_predicted  fragile X mental retardation gene 1, autosomal homolog (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Fxr1h_predicted  fragile X mental retardation gene 1, autosomal homolog (predicted)      Symbol and Name status set to approved 70820 APPROVED