Cntnap2 (contactin associated protein 2) - Rat Genome Database

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Gene: Cntnap2 (contactin associated protein 2) Rattus norvegicus
Analyze
Symbol: Cntnap2
Name: contactin associated protein 2
RGD ID: 1307076
Description: Enables protease binding activity and transmembrane transporter binding activity. Involved in prepulse inhibition. Located in several cellular components, including main axon; neuronal cell body; and synaptic membrane. Used to study autism spectrum disorder and visual epilepsy. Human ortholog(s) of this gene implicated in several diseases, including Pitt-Hopkins syndrome; autism spectrum disorder (multiple); communication disorder (multiple); cortical dysplasia-focal epilepsy syndrome; and social phobia. Orthologous to human CNTNAP2 (contactin associated protein 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; tetrachloromethane.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: contactin associated protein-like 2; contactin-associated protein-like 2; LOC100364190; LOC362355; LOC500105; mKIAA0868 protein-like; similar to contactin associated protein-like 2 isoform a
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: Cntnap2em1Sage  
Genetic Models: SD-Cntnap2em1Sage
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2474,109,455 - 76,366,434 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl474,109,472 - 76,362,027 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0474,700,539 - 77,025,463 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04140,006,078 - 140,855,979 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04141,164,125 - 141,697,964 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4474,277,978 - 75,440,178 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1475,661,775 - 75,716,308 (+)NCBI
Celera468,984,397 - 71,173,021 (+)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
action potential initiation  (ISO)
adult behavior  (ISO)
associative learning  (ISO)
axonogenesis  (ISO)
behavioral response to pain  (ISO)
cell adhesion  (IEA)
cell morphogenesis  (ISO)
cell population proliferation  (ISO)
central nervous system myelination  (ISO)
cerebellar Purkinje cell layer morphogenesis  (ISO)
cerebellum development  (ISO)
cerebral cortex development  (ISO)
chemical synaptic transmission  (ISO)
circadian sleep/wake cycle  (ISO)
clustering of voltage-gated potassium channels  (ISO)
dendrite arborization  (ISO)
dendritic spine development  (ISO)
dendritic spine maintenance  (ISO)
dendritic spine organization  (ISO)
embryonic brain development  (ISO)
ERK1 and ERK2 cascade  (ISO)
excitatory chemical synaptic transmission  (ISO)
excitatory postsynaptic potential  (ISO)
excitatory synapse assembly  (ISO)
fat cell differentiation  (ISO)
gene expression  (ISO)
glial cell proliferation  (ISO)
glutamatergic neuron differentiation  (ISO)
grooming behavior  (ISO)
in utero embryonic development  (ISO)
inflammatory response  (ISO)
inhibitory chemical synaptic transmission  (ISO)
inhibitory synapse assembly  (ISO)
intracellular signal transduction  (ISO)
learning  (ISO)
limbic system development  (ISO)
locomotor rhythm  (ISO)
locomotory behavior  (ISO)
maintenance of synapse structure  (ISO)
mitochondrion organization  (ISO)
motor behavior  (ISO)
multicellular organism growth  (ISO)
myelination  (ISO)
negative regulation of neuronal action potential  (ISO)
negative regulation of synaptic transmission, GABAergic  (ISO)
neural precursor cell proliferation  (ISO)
neuromuscular junction development, skeletal muscle fiber  (ISO)
neuromuscular process  (ISO)
neuromuscular process controlling posture  (ISO)
neuron projection development  (ISO)
neuron projection morphogenesis  (ISO)
neuronal action potential  (ISO)
positive regulation of gap junction assembly  (ISO)
positive regulation of neuronal action potential  (ISO)
postsynaptic density organization  (ISO)
prepulse inhibition  (IMP)
protein kinase B signaling  (ISO)
protein localization  (ISO)
protein localization to juxtaparanode region of axon  (ISO)
regulation of postsynaptic membrane neurotransmitter receptor levels  (ISO)
response to dietary excess  (ISO)
response to heat  (ISO)
response to hormone  (ISO)
response to interleukin-17  (ISO)
response to light intensity  (ISO)
response to mechanical stimulus  (ISO)
response to metformin  (ISO)
response to odorant  (ISO)
response to organic substance  (ISO)
response to pain  (ISO)
response to xenobiotic stimulus  (ISO)
rhythmic behavior  (ISO)
social behavior  (ISO)
startle response  (IMP)
striatum development  (ISO)
superior temporal gyrus development  (ISO)
thalamus development  (ISO)
TOR signaling  (ISO)
transmission of nerve impulse  (ISO)
vocal learning  (ISO)
vocalization behavior  (ISO)
walking behavior  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. A common genetic variant in the neurexin superfamily member CNTNAP2 increases familial risk of autism. Arking DE, etal., Am J Hum Genet. 2008 Jan;82(1):160-4. doi: 10.1016/j.ajhg.2007.09.015.
2. Molecular cytogenetic analysis and resequencing of contactin associated protein-like 2 in autism spectrum disorders. Bakkaloglu B, etal., Am J Hum Genet. 2008 Jan;82(1):165-73. doi: 10.1016/j.ajhg.2007.09.017.
3. Short- and long-term treatment with estradiol or progesterone modifies the expression of GFAP, MAP2 and Tau in prefrontal cortex and hippocampus. Camacho-Arroyo I, etal., Life Sci. 2011 Jul 18;89(3-4):123-8. doi: 10.1016/j.lfs.2011.05.008. Epub 2011 Jun 12.
4. CASPR2 autoantibodies are raised during pregnancy in mothers of children with mental retardation and disorders of psychological development but not autism. Coutinho E, etal., J Neurol Neurosurg Psychiatry. 2017 Sep;88(9):718-721. doi: 10.1136/jnnp-2016-315251. Epub 2017 Jun 1.
5. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
6. CNTNAP2 is significantly associated with schizophrenia and major depression in the Han Chinese population. Ji W, etal., Psychiatry Res. 2013 May 30;207(3):225-8. doi: 10.1016/j.psychres.2012.09.024. Epub 2012 Nov 2.
7. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
8. Investigation of dyslexia and SLI risk variants in reading- and language-impaired subjects. Newbury DF, etal., Behav Genet. 2011 Jan;41(1):90-104. doi: 10.1007/s10519-010-9424-3. Epub 2010 Dec 17.
9. Contactin-associated protein (Caspr) 2 interacts with carboxypeptidase E in the CNS. Oiso S, etal., J Neurochem. 2009 Apr;109(1):158-67. Epub 2009 Jan 23.
10. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
11. Exogenous and evoked oxytocin restores social behavior in the Cntnap2 mouse model of autism. Pe├▒agarikano O, etal., Sci Transl Med. 2015 Jan 21;7(271):271ra8. doi: 10.1126/scitranslmed.3010257.
12. Caspr2, a new member of the neurexin superfamily, is localized at the juxtaparanodes of myelinated axons and associates with K+ channels. Poliak S, etal., Neuron. 1999 Dec;24(4):1037-47.
13. Learning delays in a mouse model of Autism Spectrum Disorder. Rendall AR, etal., Behav Brain Res. 2016 Apr 15;303:201-7. doi: 10.1016/j.bbr.2016.02.006. Epub 2016 Feb 9.
14. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Altered Auditory Processing, Filtering, and Reactivity in the Cntnap2 Knock-Out Rat Model for Neurodevelopmental Disorders. Scott KE, etal., J Neurosci. 2018 Oct 3;38(40):8588-8604. doi: 10.1523/JNEUROSCI.0759-18.2018. Epub 2018 Aug 20.
17. A common genetic variant in the neurexin superfamily member CNTNAP2 is associated with increased risk for selective mutism and social anxiety-related traits. Stein MB, etal., Biol Psychiatry. 2011 May 1;69(9):825-31. doi: 10.1016/j.biopsych.2010.11.008. Epub 2010 Dec 30.
18. Cntnap2 Knockout Rats and Mice Exhibit Epileptiform Activity and Abnormal Sleep-Wake Physiology. Thomas AM, etal., Sleep. 2017 Jan 1;40(1). doi: 10.1093/sleep/zsw026.
19. Analysis of two language-related genes in autism: a case-control association study of FOXP2 and CNTNAP2. Toma C, etal., Psychiatr Genet. 2013 Apr;23(2):82-5. doi: 10.1097/YPG.0b013e32835d6fc6.
20. A functional genetic link between distinct developmental language disorders. Vernes SC, etal., N Engl J Med. 2008 Nov 27;359(22):2337-45. doi: 10.1056/NEJMoa0802828. Epub 2008 Nov 5.
21. CNTNAP2 Is Significantly Associated With Speech Sound Disorder in the Chinese Han Population. Zhao YJ, etal., J Child Neurol. 2015 Nov;30(13):1806-11. doi: 10.1177/0883073815581609. Epub 2015 Apr 20.
22. CNTNAP2 and NRXN1 are mutated in autosomal-recessive Pitt-Hopkins-like mental retardation and determine the level of a common synaptic protein in Drosophila. Zweier C, etal., Am J Hum Genet. 2009 Nov;85(5):655-66. doi: 10.1016/j.ajhg.2009.10.004. Epub 2009 Nov 5.
Additional References at PubMed
PMID:11567047   PMID:12963709   PMID:12975355   PMID:18179893   PMID:18760366   PMID:19109503   PMID:19458237   PMID:19706678   PMID:25378149   PMID:25918374   PMID:35106542  


Genomics

Comparative Map Data
Cntnap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2474,109,455 - 76,366,434 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl474,109,472 - 76,362,027 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0474,700,539 - 77,025,463 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04140,006,078 - 140,855,979 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04141,164,125 - 141,697,964 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4474,277,978 - 75,440,178 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1475,661,775 - 75,716,308 (+)NCBI
Celera468,984,397 - 71,173,021 (+)NCBICelera
Cytogenetic Map4q24NCBI
CNTNAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387146,116,801 - 148,420,998 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl7146,116,002 - 148,420,998 (+)EnsemblGRCh38hg38GRCh38
GRCh377145,813,893 - 148,118,090 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367145,444,386 - 147,749,019 (+)NCBINCBI36Build 36hg18NCBI36
Build 347145,251,476 - 147,555,734NCBI
Celera7140,486,396 - 142,788,651 (+)NCBICelera
Cytogenetic Map7q35-q36.1NCBI
HuRef7139,891,239 - 142,197,449 (+)NCBIHuRef
CHM1_17145,822,316 - 148,126,480 (+)NCBICHM1_1
T2T-CHM13v2.07147,296,849 - 149,602,894 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27145,151,433 - 147,456,408 (+)NCBI
Cntnap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39645,036,995 - 47,278,330 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl645,036,291 - 47,281,147 (+)EnsemblGRCm39 Ensembl
GRCm38645,060,061 - 47,301,393 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl645,059,357 - 47,304,213 (+)EnsemblGRCm38mm10GRCm38
MGSCv37645,010,060 - 47,251,387 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36644,989,695 - 47,230,955 (+)NCBIMGSCv36mm8
Celera644,970,994 - 47,154,076 (+)NCBICelera
Cytogenetic Map6B2.2- B2.3NCBI
Cntnap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554911,984,050 - 3,981,830 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554911,983,002 - 3,982,510 (+)NCBIChiLan1.0ChiLan1.0
CNTNAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.17150,344,805 - 152,632,198 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7150,345,240 - 152,626,818 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v07137,858,607 - 140,150,820 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
CNTNAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1162,239,953 - 4,208,718 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl162,243,918 - 4,208,416 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha163,343,504 - 5,308,739 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0162,046,017 - 4,067,208 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl162,046,017 - 4,067,195 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1162,032,477 - 4,003,070 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0161,891,758 - 3,867,350 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0161,896,111 - 3,930,992 (-)NCBIUU_Cfam_GSD_1.0
Cntnap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051188,151,620 - 10,043,987 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365272,859,930 - 4,746,995 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365272,859,442 - 4,748,885 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNTNAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.19109,740,510 - 111,781,144 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29120,886,243 - 121,579,520 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CNTNAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121114,741,918 - 116,988,691 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607212,636,077 - 12,937,176 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cntnap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248007,181,020 - 9,279,678 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248007,182,588 - 9,280,407 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cntnap2
16033 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4521460278882945Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42690728575585128Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42949419581006281Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)43443048482490359Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)43952426474726312Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)44043341485433414Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
4889969Bss96Bone structure and strength QTL 964.9tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)45664777678882945Rat
4889972Bss97Bone structure and strength QTL 975.6tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)45664777678882945Rat
5685009Bmd86Bone mineral density QTL 863.7tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)45664777678882945Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)45664777678882945Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
631546Bp86Blood pressure QTL 863.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711443291360801Rat
634311Sach7Saccharin preference QTL 7taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)457114432102114432Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711470578881294Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)45843213392991462Rat
631671Iddm11Insulin dependent diabetes mellitus QTL 113.60.0012blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)45863587778886137Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1578657Bss12Bone structure and strength QTL 128.9femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)460220938105220938Rat
1578658Bss13Bone structure and strength QTL 138femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)460220938105220938Rat
2300179Bmd50Bone mineral density QTL 505.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)460928534105928534Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
6478743Anxrr40Anxiety related response QTL 400.83076defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478772Anxrr49Anxiety related response QTL 490.15488defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478684Anxrr30Anxiety related response QTL 300.00087defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
631651Bp124Blood pressure QTL 1243arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462879517107879517Rat
7394826Bw126Body weight QTL 1260.002body mass (VT:0001259)body weight gain (CMO:0000420)46293326987483707Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)46293350882490359Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in mean arterial blood pressure (CMO:0002035)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in systolic blood pressure (CMO:0000747)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in pulse pressure (CMO:0001882)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)462933508114921294Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
2312569Pur19Proteinuria QTL 193.40.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)46588210796130297Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)470808386115808386Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)470808386115808386Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
724522Bp146Blood pressure QTL 1462.20.0021arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)473630210118630210Rat
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat

Markers in Region
D4Mgh24  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,726,182 - 74,726,312 (+)MAPPERmRatBN7.2
Rnor_6.0475,345,304 - 75,345,433NCBIRnor6.0
Rnor_5.04140,028,016 - 140,028,145UniSTSRnor5.0
RGSC_v3.4473,752,460 - 73,752,590RGDRGSC3.4
RGSC_v3.4473,752,461 - 73,752,590UniSTSRGSC3.4
RGSC_v3.1474,028,591 - 74,028,720RGD
Celera469,583,744 - 69,583,873UniSTS
RH 3.4 Map4470.3UniSTS
RH 3.4 Map4470.3RGD
SHRSP x BN Map437.38UniSTS
SHRSP x BN Map437.38RGD
Cytogenetic Map4q24UniSTS
D4Rat30  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,585,004 - 75,585,128 (+)MAPPERmRatBN7.2
Rnor_6.0476,238,676 - 76,238,799NCBIRnor6.0
Rnor_5.04140,914,997 - 140,915,120UniSTSRnor5.0
RGSC_v3.4474,625,616 - 74,625,985RGDRGSC3.4
RGSC_v3.4474,625,751 - 74,625,874UniSTSRGSC3.4
RGSC_v3.1474,901,881 - 74,902,004RGD
Celera470,423,094 - 70,423,217UniSTS
RH 3.4 Map4466.2UniSTS
RH 3.4 Map4466.2RGD
SHRSP x BN Map437.38UniSTS
SHRSP x BN Map437.38RGD
FHH x ACI Map445.77RGD
Cytogenetic Map4q24UniSTS
D4Rat32  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2476,221,364 - 76,221,504 (+)MAPPERmRatBN7.2
Rnor_6.0476,884,299 - 76,884,438NCBIRnor6.0
Rnor_5.04141,557,852 - 141,557,991UniSTSRnor5.0
RGSC_v3.4475,299,589 - 75,299,729RGDRGSC3.4
RGSC_v3.4475,299,590 - 75,299,729UniSTSRGSC3.4
RGSC_v3.1475,575,720 - 75,575,859RGD
Celera471,029,761 - 71,029,900UniSTS
RH 3.4 Map4460.8RGD
RH 3.4 Map4460.8UniSTS
RH 2.0 Map4503.9RGD
FHH x ACI Map443.77RGD
Cytogenetic Map4q24UniSTS
D4Rat31  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,411,084 - 75,411,258 (+)MAPPERmRatBN7.2
Rnor_6.0476,047,963 - 76,048,134NCBIRnor6.0
Rnor_5.04140,723,086 - 140,723,257UniSTSRnor5.0
RGSC_v3.4474,445,506 - 74,445,677UniSTSRGSC3.4
RGSC_v3.4474,445,505 - 74,445,677RGDRGSC3.4
RGSC_v3.1474,721,636 - 74,721,807RGD
Celera470,250,387 - 70,250,559UniSTS
RH 3.4 Map4464.8RGD
RH 3.4 Map4464.8UniSTS
RH 2.0 Map4493.7RGD
SHRSP x BN Map437.45RGD
FHH x ACI Map445.77RGD
Cytogenetic Map4q24UniSTS
D4Rat29  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2476,013,530 - 76,013,686 (+)MAPPERmRatBN7.2
Rnor_6.0476,673,801 - 76,673,956NCBIRnor6.0
Rnor_5.04141,347,405 - 141,347,560UniSTSRnor5.0
RGSC_v3.4475,086,746 - 75,086,902RGDRGSC3.4
RGSC_v3.4475,086,747 - 75,086,902UniSTSRGSC3.4
RGSC_v3.1475,362,877 - 75,363,032RGD
Celera470,836,077 - 70,836,232UniSTS
RH 3.4 Map4466.2RGD
RH 3.4 Map4466.2UniSTS
SHRSP x BN Map437.38UniSTS
SHRSP x BN Map437.38RGD
FHH x ACI Map446.9099RGD
Cytogenetic Map4q24UniSTS
D4Rat213  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,825,750 - 74,825,917 (+)MAPPERmRatBN7.2
Rnor_6.0475,448,682 - 75,448,848NCBIRnor6.0
Rnor_5.04140,129,261 - 140,129,427UniSTSRnor5.0
RGSC_v3.4473,853,685 - 73,853,852RGDRGSC3.4
RGSC_v3.4473,853,686 - 73,853,852UniSTSRGSC3.4
RGSC_v3.1474,129,815 - 74,129,982RGD
Celera469,677,023 - 69,677,189UniSTS
FHH x ACI Map445.77RGD
FHH x ACI Map445.77UniSTS
Cytogenetic Map4q24UniSTS
D4Rat164  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2473,998,166 - 73,998,347 (+)MAPPERmRatBN7.2
Rnor_6.0474,591,692 - 74,591,870NCBIRnor6.0
Rnor_5.04139,278,566 - 139,278,744UniSTSRnor5.0
RGSC_v3.4473,005,176 - 73,005,355RGDRGSC3.4
RGSC_v3.4473,005,177 - 73,005,355UniSTSRGSC3.4
RGSC_v3.1473,281,307 - 73,281,485RGD
Celera468,877,807 - 68,877,985UniSTS
RH 3.4 Map4443.2RGD
RH 3.4 Map4443.2UniSTS
RH 2.0 Map4465.6RGD
SHRSP x BN Map436.3RGD
Cytogenetic Map4q24UniSTS
D4Arb30  
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.4473,972,454 - 73,972,591UniSTSRGSC3.4
RGSC_v3.4473,972,453 - 73,972,591RGDRGSC3.4
RGSC_v3.1474,248,583 - 74,248,721RGD
Celera469,789,851 - 69,789,980UniSTS
RH 3.4 Map4465.4RGD
RH 3.4 Map4465.4UniSTS
RH 2.0 Map4512.0RGD
SHRSP x BN Map437.38RGD
FHH x ACI Map445.77RGD
Cytogenetic Map4q24UniSTS
D4Rat263  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2476,047,610 - 76,047,808 (+)MAPPERmRatBN7.2
Rnor_6.0476,707,162 - 76,707,359NCBIRnor6.0
Rnor_5.04141,380,766 - 141,380,963UniSTSRnor5.0
RGSC_v3.4475,121,733 - 75,121,931RGDRGSC3.4
RGSC_v3.4475,121,734 - 75,121,931UniSTSRGSC3.4
RGSC_v3.1475,397,864 - 75,398,061RGD
Celera470,861,003 - 70,861,200UniSTS
RH 3.4 Map4457.1RGD
RH 3.4 Map4457.1UniSTS
RH 2.0 Map4509.2RGD
SHRSP x BN Map438.62RGD
Cytogenetic Map4q24UniSTS
D4Got54  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,763,961 - 75,764,152 (+)MAPPERmRatBN7.2
Rnor_6.0476,422,794 - 76,422,984NCBIRnor6.0
Rnor_5.04141,097,257 - 141,097,447UniSTSRnor5.0
RGSC_v3.4474,819,527 - 74,819,718RGDRGSC3.4
RGSC_v3.4474,819,528 - 74,819,718UniSTSRGSC3.4
RGSC_v3.1475,095,657 - 75,095,848RGD
Celera470,593,082 - 70,593,272UniSTS
RH 3.4 Map4461.2UniSTS
RH 3.4 Map4461.2RGD
RH 2.0 Map4513.8RGD
Cytogenetic Map4q24UniSTS
D4Got57  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,324,733 - 75,324,869 (+)MAPPERmRatBN7.2
Rnor_6.0475,961,951 - 75,962,086NCBIRnor6.0
Rnor_5.04140,637,032 - 140,637,167UniSTSRnor5.0
RGSC_v3.4474,358,801 - 74,358,937RGDRGSC3.4
RGSC_v3.4474,358,802 - 74,358,937UniSTSRGSC3.4
RGSC_v3.1474,634,932 - 74,635,067RGD
Celera470,164,353 - 70,164,488UniSTS
RH 3.4 Map4462.8UniSTS
RH 3.4 Map4462.8RGD
RH 2.0 Map4518.4RGD
Cytogenetic Map4q24UniSTS
D4Got56  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,506,665 - 74,506,834 (+)MAPPERmRatBN7.2
Rnor_6.0475,127,593 - 75,127,761NCBIRnor6.0
Rnor_5.04139,810,323 - 139,810,491UniSTSRnor5.0
RGSC_v3.4473,525,824 - 73,525,994RGDRGSC3.4
RGSC_v3.4473,525,826 - 73,525,994UniSTSRGSC3.4
RGSC_v3.1473,801,954 - 73,802,124RGD
Celera469,370,463 - 69,370,641UniSTS
RH 3.4 Map4449.5UniSTS
RH 3.4 Map4449.5RGD
RH 2.0 Map4518.5RGD
Cytogenetic Map4q24UniSTS
D4Got53  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2476,112,515 - 76,112,706 (+)MAPPERmRatBN7.2
Rnor_6.0476,772,995 - 76,773,185NCBIRnor6.0
Rnor_5.04141,445,977 - 141,446,167UniSTSRnor5.0
RGSC_v3.4475,188,431 - 75,188,626RGDRGSC3.4
RGSC_v3.4475,188,432 - 75,188,626UniSTSRGSC3.4
RGSC_v3.1475,464,562 - 75,464,756RGD
Celera470,925,885 - 70,926,075UniSTS
RH 3.4 Map4464.8RGD
RH 3.4 Map4464.8UniSTS
Cytogenetic Map4q24UniSTS
D4Got55  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,591,261 - 75,591,515 (+)MAPPERmRatBN7.2
Rnor_6.0476,244,952 - 76,245,203NCBIRnor6.0
Rnor_5.04140,920,959 - 140,921,210UniSTSRnor5.0
RGSC_v3.4474,632,585 - 74,632,836UniSTSRGSC3.4
RGSC_v3.4474,632,585 - 74,632,836RGDRGSC3.4
RGSC_v3.1474,908,715 - 74,908,966RGD
Celera470,429,253 - 70,429,504UniSTS
RH 3.4 Map4466.2UniSTS
RH 3.4 Map4466.2RGD
Cytogenetic Map4q24UniSTS
D4Got279  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,429,629 - 74,429,764 (+)MAPPERmRatBN7.2
Rnor_6.0475,040,263 - 75,040,397NCBIRnor6.0
Rnor_5.04139,723,624 - 139,723,758UniSTSRnor5.0
RGSC_v3.4473,446,775 - 73,446,909UniSTSRGSC3.4
Celera469,293,792 - 69,293,926UniSTS
Cytogenetic Map4q24UniSTS
D5Got305  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,471,239 - 74,471,355 (+)MAPPERmRatBN7.2
Rnor_6.0475,081,473 - 75,081,589NCBIRnor6.0
Rnor_5.04139,764,834 - 139,764,950UniSTSRnor5.0
RGSC_v3.4473,489,841 - 73,489,959UniSTSRGSC3.4
Celera469,335,048 - 69,335,167UniSTS
Cytogenetic Map4q24UniSTS
AW523771  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,159,507 - 74,159,669 (+)MAPPERmRatBN7.2
Rnor_6.0474,755,772 - 74,755,933NCBIRnor6.0
Rnor_5.04139,443,183 - 139,443,344UniSTSRnor5.0
RGSC_v3.4473,173,705 - 73,173,866UniSTSRGSC3.4
Celera469,026,257 - 69,026,418UniSTS
RH 3.4 Map4438.6UniSTS
Cytogenetic Map4q24UniSTS
RH142692  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,086,690 - 75,086,940 (+)MAPPERmRatBN7.2
Rnor_6.0475,711,575 - 75,711,824NCBIRnor6.0
Rnor_5.04140,387,135 - 140,387,384UniSTSRnor5.0
RGSC_v3.4474,122,013 - 74,122,262UniSTSRGSC3.4
Celera469,933,817 - 69,934,066UniSTS
RH 3.4 Map4468.4UniSTS
Cytogenetic Map4q24UniSTS
BE095511  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,173,920 - 74,174,111 (+)MAPPERmRatBN7.2
Rnor_6.0474,770,184 - 74,770,374NCBIRnor6.0
Rnor_5.04139,457,595 - 139,457,785UniSTSRnor5.0
RGSC_v3.4473,188,118 - 73,188,308UniSTSRGSC3.4
Celera469,040,672 - 69,040,862UniSTS
RH 3.4 Map4435.0UniSTS
Cytogenetic Map4q24UniSTS
RH137515  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2476,361,071 - 76,361,282 (+)MAPPERmRatBN7.2
Rnor_6.0477,022,556 - 77,022,766NCBIRnor6.0
Rnor_5.04141,695,057 - 141,695,267UniSTSRnor5.0
RGSC_v3.4475,440,293 - 75,440,503UniSTSRGSC3.4
Celera471,167,659 - 71,167,869UniSTS
Cytogenetic Map4q24UniSTS
RH138106  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,086,537 - 75,086,720 (+)MAPPERmRatBN7.2
Rnor_6.0475,711,422 - 75,711,604NCBIRnor6.0
Rnor_5.04140,386,982 - 140,387,164UniSTSRnor5.0
RGSC_v3.4474,121,860 - 74,122,042UniSTSRGSC3.4
Celera469,933,664 - 69,933,846UniSTS
Cytogenetic Map4q24UniSTS
AU048430  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,741,991 - 75,742,100 (+)MAPPERmRatBN7.2
Rnor_6.0476,400,432 - 76,400,540NCBIRnor6.0
Rnor_5.04141,074,895 - 141,075,003UniSTSRnor5.0
RGSC_v3.4474,797,554 - 74,797,662UniSTSRGSC3.4
Celera470,571,112 - 70,571,220UniSTS
Cytogenetic Map4q24UniSTS
AU049338  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0476,822,528 - 76,822,658NCBIRnor6.0
Rnor_5.04141,496,081 - 141,496,211UniSTSRnor5.0
RGSC_v3.4475,237,432 - 75,237,590UniSTSRGSC3.4
Celera470,967,640 - 70,967,782UniSTS
Cytogenetic Map4q24UniSTS
GDB:1318422  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2476,036,046 - 76,036,234 (+)MAPPERmRatBN7.2
Rnor_6.0476,695,599 - 76,695,786NCBIRnor6.0
Rnor_5.04141,369,203 - 141,369,390UniSTSRnor5.0
RGSC_v3.4475,110,141 - 75,110,328UniSTSRGSC3.4
Cytogenetic Map4q24UniSTS
px-50f10  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2475,366,050 - 75,366,227 (+)MAPPERmRatBN7.2
Rnor_6.0476,003,237 - 76,003,413NCBIRnor6.0
Rnor_5.04140,678,318 - 140,678,494UniSTSRnor5.0
RGSC_v3.4474,400,118 - 74,400,294UniSTSRGSC3.4
Celera470,205,666 - 70,205,842UniSTS
Cytogenetic Map4q24UniSTS
G46753  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2474,122,978 - 74,123,242 (+)MAPPERmRatBN7.2
Rnor_6.0474,714,063 - 74,714,326NCBIRnor6.0
Rnor_5.04139,401,517 - 139,401,780UniSTSRnor5.0
RGSC_v3.4473,134,226 - 73,134,489UniSTSRGSC3.4
Celera468,997,911 - 68,998,174UniSTS
Cytogenetic Map4q24UniSTS


Genetic Models
This gene Cntnap2 is modified in the following models/strains

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000008688   ⟹   ENSRNOP00000088343
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl474,109,472 - 76,362,027 (+)Ensembl
Rnor_6.0 Ensembl475,325,651 - 77,023,138 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000067874
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl476,995,595 - 77,022,438 (+)Ensembl
RefSeq Acc Id: XM_039109025   ⟹   XP_038964953
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2474,109,455 - 76,366,434 (+)NCBI
RefSeq Acc Id: XM_039109026   ⟹   XP_038964954
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2475,230,128 - 76,366,434 (+)NCBI
RefSeq Acc Id: XM_039109027   ⟹   XP_038964955
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2475,194,919 - 76,366,434 (+)NCBI
RefSeq Acc Id: XM_039109028   ⟹   XP_038964956
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2475,194,919 - 76,366,434 (+)NCBI
RefSeq Acc Id: XM_039109029   ⟹   XP_038964957
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2476,305,808 - 76,366,434 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_038964953   ⟸   XM_039109025
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GH02 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964956   ⟸   XM_039109028
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038964955   ⟸   XM_039109027
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038964954   ⟸   XM_039109026
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038964957   ⟸   XM_039109029
- Peptide Label: isoform X4
RefSeq Acc Id: ENSRNOP00000088343   ⟸   ENSRNOT00000008688
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307076 AgrOrtholog
BioCyc Gene G2FUF-45027 BioCyc
Ensembl Genes ENSRNOG00000006617 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000088343 ENTREZGENE
  ENSRNOP00000088343.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000008688 ENTREZGENE
  ENSRNOT00000008688.8 UniProtKB/TrEMBL
InterPro Caspr2 UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/TrEMBL
  EGF-like_dom UniProtKB/TrEMBL
  FA58C UniProtKB/TrEMBL
  Fibrinogen-like_C UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_dom UniProtKB/TrEMBL
  Galactose-bd-like_sf UniProtKB/TrEMBL
  Laminin_G UniProtKB/TrEMBL
  Neurexin-like UniProtKB/TrEMBL
NCBI Gene Cntnap2 ENTREZGENE
PANTHER PTHR15036:SF33 UniProtKB/TrEMBL
Pfam F5_F8_type_C UniProtKB/TrEMBL
  Laminin_G_2 UniProtKB/TrEMBL
PhenoGen Cntnap2 PhenoGen
PROSITE EGF_3 UniProtKB/TrEMBL
  FA58C_1 UniProtKB/TrEMBL
  FA58C_2 UniProtKB/TrEMBL
  FA58C_3 UniProtKB/TrEMBL
  FIBRINOGEN_C_2 UniProtKB/TrEMBL
  LAM_G_DOMAIN UniProtKB/TrEMBL
SMART 4.1m UniProtKB/TrEMBL
  EGF UniProtKB/TrEMBL
  FA58C UniProtKB/TrEMBL
  LamG UniProtKB/TrEMBL
Superfamily-SCOP SSF49785 UniProtKB/TrEMBL
  SSF49899 UniProtKB/TrEMBL
  SSF56496 UniProtKB/TrEMBL
UniProt A0A8I6GH02 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-17 Cntnap2  contactin associated protein-like 2  LOC100364190  mKIAA0868 protein-like  Data Merged 737654 APPROVED
2010-05-06 LOC100364190  mKIAA0868 protein-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Cntnap2  contactin associated protein-like 2   Cntnap2_predicted  contactin associated protein-like 2 (predicted)  'predicted' is removed 2292626 APPROVED
2006-11-19 LOC500105  similar to contactin associated protein-like 2 isoform a      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-12 Cntnap2_predicted  contactin associated protein-like 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED