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Gene: Kcnc1 (potassium voltage-gated channel subfamily C member 1) Rattus norvegicus
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Symbol: Kcnc1
Name: potassium voltage-gated channel subfamily C member 1
Description: Exhibits delayed rectifier potassium channel activity; ion channel binding activity; and voltage-gated ion channel activity involved in regulation of presynaptic membrane potential. Involved in several processes, including brain development; positive regulation of voltage-gated potassium channel activity; and response to auditory stimulus. Localizes to several cellular components, including calyx of Held; integral component of plasma membrane; and neuronal cell body membrane. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 7. Orthologous to human KCNC1 (potassium voltage-gated channel subfamily C member 1); INTERACTS WITH 6-propyl-2-thiouracil; bis(2-ethylhexyl) phthalate; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: KShIIIB; Kv3.1; KV4; NGK2; NGK2-KV4; potassium channel gene 1; Potassium channel gene 1 (alternative splicing product described in Luneau et al 1991); potassium channel, voltage gated Shaw-related subfamily C, member 1; potassium voltage gated channel, Shaw-related subfamily, member 1; RAW2; voltage-gated potassium channel subunit Kv3.1; voltage-gated potassium channel subunit Kv4
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01102,414,352 - 102,456,718 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1102,414,625 - 102,456,411 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01103,499,689 - 103,541,476 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,928,275 - 96,970,062 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1197,006,385 - 97,048,173 (+)NCBI
Celera191,151,218 - 91,193,065 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Kcnc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2955
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.