Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

QTL: Tcas6 (Tongue tumor susceptibility QTL 6) Rattus norvegicus

Symbol: Tcas6
Name: Tongue tumor susceptibility QTL 6
Also known as: Tscc2; Tongue squamous cell carcinoma QTL 2; Tts6
Trait: tongue integrity trait   (VT:0010553)    
Measurement Type: number of squamous cell tumors of the tongue with diameter greater than 3 mm   (CMO:0001950)    
LOD Score: 6.85
P Value: Not Available
Variance: Not Available
Inheritance Type: semidominant
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0195,304,961 - 156,446,783RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0191,268,282 - 162,692,800RGDRnor5.0
RGSC_v3.4192,101,613 - 146,971,983RGDRGSC3.4
RGSC_v3.1156,717,951 - 147,050,389RGD
Cross Type: intercross
Strains Crossed: DA WF 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Disease Annotations
Phenotype Annotations
Experimental Data Annotations
References - curated

Region

Genes in Region (Rnor_6.0)
Markers in Region (Rnor_6.0)
Position Markers
QTLs in Region (Rnor_6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
  
More on Tcas6
JBrowse: rn5 rn6
QTL Registration

RGD Object Information
RGD ID: 724567
Created: 2003-10-08
Species: Rattus norvegicus
Last Modified: 2006-04-14
Status: ACTIVE



Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.