Tcas6 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Tcas6 (Tongue tumor susceptibility QTL 6) Rattus norvegicus

Symbol: Tcas6
Name: Tongue tumor susceptibility QTL 6
RGD ID: 724567
Previously known as: Tscc2; Tongue squamous cell carcinoma QTL 2; Tts6
Trait: tongue integrity trait   (VT:0010553)    
Measurement Type: number of squamous cell tumors of the tongue with diameter greater than 3 mm   (CMO:0001950)    
LOD Score: 6.85
P Value: Not Available
Variance: Not Available
Inheritance Type: semidominant
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2192,948,896 - 144,267,916RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0195,304,961 - 156,446,783RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0191,268,282 - 162,692,800RGDRnor5.0
RGSC_v3.4192,101,613 - 146,971,983RGDRGSC3.4
RGSC_v3.1156,717,951 - 147,050,389RGD
Cross Type: intercross
Strains Crossed: DA WF 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Cyp2b1 is a candidate Gene for Tcas6

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
DA  (IEA)
WF  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Five quantitative trait loci affecting 4-nitroquinoline 1-oxide-induced tongue cancer in the rat. Tanuma JI, etal., Jpn J Cancer Res 2001 Jun;92(6):610-6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3083Mfge8milk fat globule EGF and factor V/VIII domain containing1133064665133080069Rat
68948Bcat2branched chain amino acid transaminase 219604040796060008Rat
61811FcgrtFc gamma receptor and transporter19557443695584171Rat
61813Ftl1ferritin light chain 119593639095938234Rat
3627Clec11aC-type lectin domain containing 11A19480045694809002Rat
62027Rps17ribosomal protein S171135295920135298506Rat
62035Cd37CD37 molecule19571917195724662Rat
2955Kcnc1potassium voltage-gated channel subfamily C member 119690295396944744Rat
71092Csrp3cysteine and glycine rich protein 319852806798546647Rat
61859Gabra5gamma-aminobutyric acid type A receptor subunit alpha 51108268728108381670Rat
69247Kcnj11potassium inwardly-rectifying channel, subfamily J, member 1119659104896594574Rat
70963Folh1folate hydrolase 11140428101140501563Rat
3214Ntrk3neurotrophic receptor tyrosine kinase 31132116472132503849Rat
3448Ptpn5protein tyrosine phosphatase, non-receptor type 519762063897681186Rat
3909Tsg101tumor susceptibility 10119741268997442589Rat
2869Igf1rinsulin-like growth factor 1 receptor1121549839121838545Rat
2639Fut2fucosyltransferase 219611954996139567Rat
69305Nr2f2nuclear receptor subfamily 2, group F, member 21124008282124022521Rat
620054Ppfia3PTPRF interacting protein alpha 319581711095845950Rat
620057PolgDNA polymerase gamma, catalytic subunit1133382764133399578Rat
3006Lhbluteinizing hormone subunit beta19589826995901973Rat
3786Abcc8ATP binding cassette subfamily C member 819659866396679495Rat
61906Nr1h2nuclear receptor subfamily 1, group H, member 219504196795047377Rat
619938Nup62nucleoporin 6219529899595314902Rat
62020Prmt1protein arginine methyltransferase 119545885395468176Rat
3888Klk1c2kallikrein 1-related peptidase C219449233294496480Rat
2969Klk1kallikrein 119464272294646714Rat
2651Gabrb3gamma-aminobutyric acid type A receptor subunit beta 31108467047108702522Rat
3212Ntf4neurotrophin 419589356095896391Rat
69366Ldhclactate dehydrogenase C19738598497403382Rat
3895Tph1tryptophan hydroxylase 119715737597178415Rat
69360Sec11aSEC11 homolog A, signal peptidase complex subunit1134881448134909427Rat
621026Rps11ribosomal protein S1119560569095607798Rat
3175Klk1b3kallikrein 1-related peptidase B319470910594713308Rat
619842Pex11aperoxisomal biogenesis factor 11 alpha1133680091133687172Rat
620030Nucb1nucleobindin 119596832595999183Rat
631429Myod1myogenic differentiation 119688486496887574Rat
632282Mrgprx3MAS related GPR family member X319772037797746953Rat
68358Acanaggrecan1132981034133044416Rat
61940Napsanapsin A aspartic peptidase19506472695077101Rat
621358Kcnc3potassium voltage-gated channel subfamily C member 319508096095095165Rat
2746Grm5glutamate metabotropic receptor 51141310069141884980Rat
628897Selenosselenoprotein S1119659779119669546Rat
2740Grin2dglutamate ionotropic receptor NMDA type subunit 2D19630687196346994Rat
621223Slc28a1solute carrier family 28 member 11135079375135122791Rat
620705Homer2homer scaffold protein 21135558977135659780Rat
620398Cyth2cytohesin 219628425296291090Rat
620244Trpm4transient receptor potential cation channel, subfamily M, member 419578180595812095Rat
628697Rpl13aribosomal protein L13A19560937495612557Rat
620101Slc17a7solute carrier family 17 member 719564970995661591Rat
2445Ctsccathepsin C1142028386142059841Rat
632284Mrgprx1MAS related GPR family member X119780609997807112Rat
621523Nkg7natural killer cell granule protein 719384474893845975Rat
620175Fgf21fibroblast growth factor 2119608349596084738Rat
61932Fahfumarylacetoacetate hydrolase1138548830138571599Rat
727784Tskstestis-specific serine kinase substrate19541431295441670Rat
628752Rab38RAB38, member RAS oncogene family1142182566142262923Rat
620133Cib1calcium and integrin binding 11134178331134183895Rat
620578Sh3gl3SH3 domain containing GRB2 like 3, endophilin A31136124502136255669Rat
3274Furinfurin (paired basic amino acid cleaving enzyme)1134348142134361182Rat
3419Klk6kallikrein related-peptidase 619427886394286136Rat
620531Slc17a6solute carrier family 17 member 61101212489101252543Rat
619716Sv2bsynaptic vesicle glycoprotein 2b1128978471129152479Rat
2348Chrna7cholinergic receptor nicotinic alpha 7 subunit1116715286116837223Rat
620998Nell1neural EGFL like 1199709305100573872Rat
2991Anpepalanyl aminopeptidase, membrane1133767332133810137Rat
2996Ldhalactate dehydrogenase A19737182397381247Rat
628872Kcnj14potassium inwardly-rectifying channel, subfamily J, member 1419629315996300810Rat
621094Emp3epithelial membrane protein 319638865196391946Rat
621482Lim2lens intrinsic membrane protein 219383759793843769Rat
621011Shank1SH3 and multiple ankyrin repeat domains 119480787994857356Rat
727893Akap13A-kinase anchoring protein 131129313183129619647Rat
621054Picalmphosphatidylinositol binding clathrin assembly protein1144056415144138045Rat
1303192Klk1c12kallikrein 1-related peptidase C1219437810394382140Rat
1303214Emc10ER membrane protein complex subunit 1019498026094988847Rat
1303220Klk1c6kallikrein 1-related peptidase C619446763994475806Rat
621526Ppp1r15aprotein phosphatase 1, regulatory subunit 15A19600005396003128Rat
2192BaxBCL2 associated X, apoptosis regulator19594000195945407Rat
1303242Klk10kallikrein related-peptidase 1019423453694239369Rat
1305167Fsd2fibronectin type III and SPRY domain containing 21135484002135522517Rat
1304831Il4i1interleukin 4 induced 119529945795324564Rat
620845Apba2amyloid beta precursor protein binding family A member 21118053270118286858Rat
620730Lin7blin-7 homolog B, crumbs cell polarity complex component19584688895849628Rat
619778Nav2neuron navigator 219895762999322339Rat
69269SnurfSNRPN upstream open reading frame1111101327111123634Rat
727872Synmsynemin1121333712121363652Rat
3351Plin1perilipin 11133664294133676854Rat
620600Nox4NADPH oxidase 41140900886141078844Rat
708406Vom2r40vomeronasal 2 receptor, 401139409429139457552Rat
620227Slco3a1solute carrier organic anion transporter family, member 3a11128115184128387887Rat
2491DbpD-box binding PAR bZIP transcription factor19617579696180745Rat
735133Plekha4pleckstrin homology domain containing A419600582496028826Rat
727805Klk1c9kallikrein 1-related peptidase C919459735994601245Rat
2638Fut1fucosyltransferase 119608693496090352Rat
621306Snrpnsmall nuclear ribonucleoprotein polypeptide N1111101327111123400Rat
621824Slc6a5solute carrier family 6 member 519964538999697016Rat
1306821Myh14myosin heavy chain 1419509626695158861Rat
621735Gabrg3gamma-aminobutyric acid type A receptor subunit gamma 31107627450108247483Rat
620268Abcc6ATP binding cassette subfamily C member 619644722496501464Rat
621182Rpl18ribosomal protein L1819618881196191452Rat
1303329Ush1cUSH1 protein network component harmonin19669530396743671Rat
1303331Pnkppolynucleotide kinase 3'-phosphatase19534146595346921Rat
1303312Etfbelectron transfer flavoprotein subunit beta19385190893866072Rat
735125Pde8aphosphodiesterase 8A1135166143135288986Rat
621839Pold1DNA polymerase delta 1, catalytic subunit19502546295041559Rat
1305013Tmem143transmembrane protein 14319637193496387991Rat
735032Klk1c3kallikrein 1-related peptidase C319467163694675417Rat
1305154Asb7ankyrin repeat and SOCS box-containing 71120222835120267411Rat
1305084Zfp473zinc finger protein 47319522268395243328Rat
71017Fzd4frizzled class receptor 41143280065143288799Rat
1306764Kdelr1KDEL endoplasmic reticulum protein retention receptor 119634725896358145Rat
1306766Ccdc81coiled-coil domain containing 811143739472143791026Rat
708405Scaf1SR-related CTD-associated factor 119548544895499389Rat
727864Hrchistidine rich calcium binding protein19581326295816987Rat
621843St8sia2ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 21127766669127838017Rat
1308541TicrrTOPBP1-interacting checkpoint and replication regulator1133597618133639513Rat
1306361Ube3aubiquitin protein ligase E3A1110070260110161675Rat
1306610Otogotogelin19674633696815416Rat
1306051Nipa2NIPA magnesium transporter 21106799979106824206Rat
1306407Isg20interferon stimulated exonuclease gene 201132829303132837027Rat
620644Vps33bVPS33B, late endosome and lysosome associated1134223967134247232Rat
620413Prmt3protein arginine methyltransferase 319949271299581774Rat
1305713C1h15orf40similar to human chromosome 15 open reading frame 401135725869135732136Rat
1306420Klk7kallikrein-related peptidase 719426717094271332Rat
1306429Wdr73WD repeat domain 731134860329134868475Rat
1305137Med25mediator complex subunit 2519535996195375827Rat
1309941Htatip2HIV-1 Tat interactive protein 219947341199488632Rat
1307978Tm6sf1transmembrane 6 superfamily member 11135782467135828443Rat
1305051Aenapoptosis enhancing nuclease1132815094132824522Rat
1305749Tmem86atransmembrane protein 86A19759591097600260Rat
1307441Siglec10sialic acid binding Ig-like lectin 1019381730193826376Rat
1307361Bcl2l12Bcl2 like 1219547227295480991Rat
628902Atf5activating transcription factor 519529560295299755Rat
738043Mrgprb4MAS-related GPR, member B419785270497853675Rat
738048Mrgprx2MAS related GPR family member X219811619298135534Rat
738051Mrgprb13MAS-related GPR, member B1319804101398041999Rat
738052Mrgprb5MAS-related G protein-coupled receptor, member B519795919397960254Rat
738053Mrgprx2lMAS-related G protein-coupled receptor, member X2-like19818544198186385Rat
1310608Fuzfuzzy planar cell polarity protein19537954295384532Rat
1307371Saa4serum amyloid A419724758097251882Rat
1310022RamacRNA guanine-7 methyltransferase activating subunit1135708529135714417Rat
1308000Lrrk1leucine-rich repeat kinase 11119844360119972885Rat
1307737Syngr4synaptogyrin 419635867996371840Rat
1305384Cpt1ccarnitine palmitoyltransferase 1c19544281495457347Rat
1305344Iglon5IgLON family member 519388090693898929Rat
1307209Lrrc28leucine rich repeat containing 281121116833121245805Rat
1305254Cemipcell migration inducing hyaluronidase 11137906921138062430Rat
1305155Adamtsl3ADAMTS-like 31136288793136596986Rat
1305998Klk8kallikrein related-peptidase 819425180394258646Rat
1304689Tubgcp5tubulin, gamma complex associated protein 51106636526106672175Rat
1307757Sphk2sphingosine kinase 219618087296188592Rat
1307120Snrnp70small nuclear ribonucleoprotein U1 subunit 7019585603995876434Rat
1307121Lrrc4bleucine rich repeat containing 4B19492203494956309Rat
3246Pcsk6proprotein convertase subtilisin/kexin type 61119428978119627626Rat
1306305Tjp1tight junction protein 11118849838119094492Rat
1332768Or14a257olfactory receptor family 14 subfamily A member 2571140276678140277619Rat
1333647Or14a258olfactory receptor family 14 subfamily A member 2581139960934139961884Rat
1311983Rgmarepulsive guidance molecule BMP co-receptor a1127128934127172918Rat
1308098Hapln3hyaluronan and proteoglycan link protein 31133046465133064665Rat
1310526Ndnnecdin, MAGE family member1115849168115850767Rat
1308950Ap3b2adaptor related protein complex 3 subunit beta 21135412580135445191Rat
1332929Or14a260olfactory receptor family 14 subfamily A member 2601139918531139919472Rat
1310399Ttll13tubulin tyrosine ligase like 131134197801134213083Rat
1310401Siglechsialic acid binding Ig-like lectin H1106593652106602749Rat
1333387Or14a257colfactory receptor family 14 subfamily A member 257C1140365515140366522Rat
1332664Or14c43olfactory receptor family 14 subfamily C member 431140171652140172647Rat
1309649Rlbp1retinaldehyde binding protein 11133308920133322296Rat
1309316Fam83efamily with sequence similarity 83, member E19619158196201182Rat
1359365Rcn3reticulocalbin 319556450395573762Rat
1333180Or14e1-ps1olfactory receptor family 14 subfamily E member 1, pseudogene 11140262826140263202Rat
1309782Eedembryonic ectoderm development1143867875143895008Rat
1333584Or13g1olfactory receptor family 13 subfamily G member 11139864790139865713Rat
1311666Tlnrd1talin rod domain containing 11137864340137866359Rat
1311904Chsy1chondroitin sulfate synthase 11119689626119750711Rat
1334239Or14a261-ps1olfactory receptor family 14 subfamily A member 261, pseudogene 11140385246140385832Rat
1334240Or14c43b-ps1olfactory receptor family 14 subfamily C member 43B, pseudogene 11140139131140140070Rat
1309736Zdhhc13zinc finger DHHC-type palmitoyltransferase 1319848730998525906Rat
1333763Or14c39olfactory receptor family 14 subfamily C member 391140414652140415590Rat
1310421Cpeb1cytoplasmic polyadenylation element binding protein 11135300048135407688Rat
1334054Or14a257bolfactory receptor family 14 subfamily A member 257B1140313700140314707Rat
1333998Or6aa1olfactory receptor family 6 subfamily A member A11139968839139969795Rat
1303228Klk4kallikrein-related peptidase 419434460894348979Rat
1310995Klk15kallikrein-related peptidase 1519469942294706626Rat
1311142Garin5agolgi associated RAB2 interactor 5A19498895994995971Rat
1310332Cyfip1cytoplasmic FMR1 interacting protein 11106710924106799393Rat
1311884Iqgap1IQ motif containing GTPase activating protein 11134679581134769776Rat
1310344Mesdmesoderm development LRP chaperone1137866707137879999Rat
1332591Or14e2-ps1olfactory receptor family 14 subfamily E member 2, pseudogene 11140358793140359187Rat
628662Aldh1a3aldehyde dehydrogenase 1 family, member A31119982272120017416Rat
1310815Klhl25kelch-like family member 251129724894129750142Rat
1312049Akt1s1AKT1 substrate 119533318695339678Rat
1309036C1h19orf81simlar to human chromosome 19 open reading frame 8119485711594871519Rat
1359360Mef2amyocyte enhancer factor 2a1120847874120982488Rat
1311751Mesp1mesoderm posterior bHLH transcription factor 11133738357133739875Rat
1311754Prc1protein regulator of cytokinesis 11134250086134271765Rat
1333281Or6aa1bolfactory receptor family 6 subfamily A member A1B1140016536140017495Rat
1310409Ttc23tetratricopeptide repeat domain 231121245996121329500Rat
1549774Irf3interferon regulatory factor 319547996695484926Rat
1309632Kcna7potassium voltage-gated channel subfamily A member 719588607395891565Rat
1306509Ruvbl2RuvB-like AAA ATPase 219590201495915364Rat
1309901Rccd1RCC1 domain containing 11134271870134281556Rat
1306521Efl1elongation factor like GTPase 11136638527136763518Rat
1309793Det1DET1 partner of COP1 E3 ubiquitin ligase1132749736132765963Rat
1308606Klk14kallikrein related-peptidase 1419412313194137239Rat
1305444Prrg2proline rich and Gla domain 219553427695543364Rat
1309966Mceemethylmalonyl CoA epimerase1117964576117987779Rat
1308280Klk9kallikrein related-peptidase 919424633994250631Rat
1305240Nomo1Nodal modulator 119650546096556280Rat
1307633Mphosph10M-phase phosphoprotein 101117948134117964149Rat
1333967Or14c44b-ps1olfactory receptor family 14 subfamily C member 44B, pseudogene 11139937745139938682Rat
1307872Sema4bsemaphorin 4B1134136646134177777Rat
1308225Gtf2h1general transcription factor IIH subunit 119732140197349455Rat
1308896Dbx1developing brain homeobox 119934960899354038Rat
1311308Tars3threonyl-tRNA synthetase 31119213189119265492Rat
1309992Nosipnitric oxide synthase interacting protein19554332995559101Rat
1308975Klk12kallikrein related-peptidase 1219422209894227637Rat
1309206Nsmce3NSE3 homolog, SMC5-SMC6 complex component1118401302118402629Rat
1308690Klk11kallikrein related-peptidase 1119422874194233281Rat
1305958Mtmr10myotubularin related protein 101117859355117910839Rat
1305959Mesp2mesoderm posterior bHLH transcription factor 21133756601133759207Rat
1310962Btbd1BTB domain containing 11135734549135773067Rat
1310111Aspdhaspartate dehydrogenase domain containing19495632794960722Rat
1307989Herc2HECT and RLD domain containing E3 ubiquitin protein ligase 21106904789107110997Rat
1308141Odad1outer dynein arm docking complex subunit 119639213296420926Rat
727859RhcgRh family, C glycoprotein1133531704133555902Rat
1307305Josd2Josephin domain containing 219496086794964751Rat
1306254Ap2a1adaptor related protein complex 2 subunit alpha 119538430395414249Rat
1308740Ctu1cytosolic thiouridylase subunit 119411543194121224Rat
1306491Zfp710zinc finger protein 7101133966256134036592Rat
1308091E2f8E2F transcription factor 819856571798584265Rat
1309860Alpk3alpha-kinase 31135014455135062294Rat
1310649Grwd1glutamate-rich WD repeat containing 119630126096306962Rat
1308705Zfp592zinc finger protein 5921134951286135002443Rat
1306977Ptov1PTOV1, extended AT-hook containing adaptor protein19534706595354514Rat
1306790Mex3bmex-3 RNA binding family member B1136855130136859365Rat
1305432Siglec5sialic acid binding Ig-like lectin 519376819093776696Rat
1309326Fv1Friend virus susceptibility 119473083994736791Rat
1309042Bnc1basonuclin 11135917676135943333Rat
1309686Tbc1d17TBC1 domain family, member 1719532477095333156Rat
1310238Man2a2mannosidase, alpha, class 2A, member 21134304714134327611Rat
1309337Klk13kallikrein related-peptidase 1319416538194177002Rat
1310310Kif7kinesin family member 71133639487133658539Rat
1308792Lins1lines homolog 11120267586120295013Rat
1308270Acp4acid phosphatase 419473637694751871Rat
1308783Adamts17ADAM metallopeptidase with thrombospondin type 1 motif, 171120445800120768204Rat
1305401Nipa1NIPA magnesium transporter 11106834000106875148Rat
1308210Abhd17cabhydrolase domain containing 17C, depalmitoylase1138084632138125595Rat
1307664Peg12paternally expressed 121115962511115965114Rat
1305291Rasip1Ras interacting protein 119609707896109564Rat
1309564Zfp819zinc finger protein 81919402734794085649Rat
1311389Abhd2abhydrolase domain containing 2, acylglycerol lipase1133217403133298564Rat
1332817Or14c48-ps1olfactory receptor family 14 subfamily C member 48, pseudogene 11140107028140108065Rat
1310551Tulp2TUB like protein 219596249695999775Rat
1308063Tmc3transmembrane channel-like 31137552347137597477Rat
1332712Or5m12-ps1olfactory receptor family 5 subfamily M member 12, pseudogene 11123124716123125128Rat
1311763Arrdc4arrestin domain containing 41122369355122383351Rat
1308882Sult2b1sulfotransferase family 2B member 119620015596261295Rat
1308810BlmBLM RecQ like helicase1134409832134496073Rat
1305357Unc45aunc-45 myosin chaperone A1134281930134296661Rat
1305359Klk1c8kallikrein 1-related peptidase C819454777494552287Rat
1309948Tmem135transmembrane protein 1351143006343143279824Rat
1309896Prr12proline rich 1219551001595534002Rat
1309666Crtc3CREB regulated transcription coactivator 31134552830134655929Rat
1306150Atp10aATPase phospholipid transporting 10A (putative)1109556760109730440Rat
1310056Chd2chromodomain helicase DNA binding protein 21127188146127317041Rat
1310371Cfap161cilia and flagella associated protein 1611137743783137768685Rat
1563905Rpl19-ps23ribosomal protein L19, pseudogene 2319516357095164284Rat
1559862Wdr93WD repeat domain 931133687254133737449Rat
1561403Klk1c10kallikrein 1-related peptidase C1019440299394407052Rat
1563497Sergefsecretion regulating guanine nucleotide exchange factor19694966097152529Rat
1566271Rpl7-ps20ribosomal protein L7, pseudogene 201137123201137130636Rat
1564385FesFES proto-oncogene, tyrosine kinase1134337698134346934Rat
1560280Agbl1AGBL carboxypeptidase 11130043914130950739Rat
1563721Otud7aOTU deubiquitinase 7A1117064428117388217Rat
1564982Vsig10lV-set and immunoglobulin domain containing 10 like19387148793880157Rat
1565899SpibSpi-B transcription factor19501893995024804Rat
1562710Nmbneuromedin B1134869446134875507Rat
1311916Hps5HPS5, biogenesis of lysosomal organelles complex 2 subunit 219728162697320945Rat
1562967Mctp2multiple C2 and transmembrane domain containing 21125769932126002886Rat
1563167Gas2growth arrest-specific 21101452361101582619Rat
1564265Ano5anoctamin 51101086490101187547Rat
1565669Vom2r38vomeronasal 2 receptor, 3819335855093420097Rat
1561783Stard5StAR-related lipid transfer domain containing 51137606151137616017Rat
1311021Arpinactin-related protein 2/3 complex inhibitor1133864288133873124Rat
1333809Or14c40olfactory receptor family 14 subfamily C member 401140234383140235375Rat
1359317Zfand6zinc finger AN1-type containing 61138581002138652052Rat
1309123Mrpl46mitochondrial ribosomal protein L461132698872132707639Rat
1309809Pih1d1PIH1 domain containing 119563959795645295Rat
1560730RGD1560730similar to MrgB3 G protein-coupled receptor19837743398378401Rat
2154Arnt2aryl hydrocarbon receptor nuclear translocator 21138236235138392868Rat
1334267Or14a257dolfactory receptor family 14 subfamily A member 257D1140204646140205587Rat
1311443RrasRAS related19550058295504362Rat
1561338Slc6a16solute carrier family 6, member 1619572169095750191Rat
1549692Vrk3VRK serine/threonine kinase 319524334495270780Rat
1559691Dnmt3a-ps3DNA methyltransferase 3 alpha, pseudogene 31107153094107163738Rat
628773Hdgfl3HDGF like 31135822600135876719Rat
1311070Me3malic enzyme 31143534024143735551Rat
1559901Mrps11mitochondrial ribosomal protein S111132707601132717253Rat
1334399Or6f1olfactory receptor family 6 subfamily F member 11139888779139889705Rat
1332905Or14n1olfactory receptor family 14 subfamily N member 11140064224140065216Rat
1333057Or14c39bolfactory receptor family 14 subfamily C member 39B1140329678140330607Rat
1311596Mybpc2myosin binding protein C219499410495017650Rat
1311197Mkrn3makorin, ring finger protein, 31115926774115929286Rat
1559980Ccdc179coiled-coil domain containing 1791101600369101604315Rat
1333037Or14c44-ps1olfactory receptor family 14 subfamily C member 44, pseudogene 11140004210140005185Rat
1334373Or5ae1olfactory receptor family 5 subfamily AE member 11138860924138861871Rat
1334427Or14f1-ps1olfactory receptor family 14 subfamily F member 1, pseudogene 11140305863140306292Rat
1359545Prss23serine protease 231143402725143422182Rat
1311839Hddc3HD domain containing 31134299469134301757Rat
1561859Pgpep1lpyroglutamyl-peptidase I-like1121835243121868368Rat
1359455Hikeshiheat shock protein nuclear import factor hikeshi1143825922143849374Rat
1585050Ybx1-ps11Y box binding protein 1, pseudogene 111102898503102915906Rat
1564929Tm2d3TM2 domain containing 31119264576119277099Rat
1565432Svipsmall VCP interacting protein1101587128101592818Rat
1585077Stip1-ps1stress-induced phosphoprotein 1, pseudogene 11101898734101900378Rat
1565454Izumo1izumo sperm-oocyte fusion 119609081796096893Rat
1583954Hnrnpa1-ps16heterogeneous nuclear ribonucleoprotein A1, pseudogene 161106395841106397127Rat
1583734Ngrnneugrin, neurite outgrowth associated1134213235134219348Rat
1583735Top1-ps1DNA topoisomerase 1, pseudogene 11127423431127432141Rat
1583786Rpl26-ps7ribosomal protein L26, pseudogene 71127659594127660098Rat
1583787Mif-ps8macrophage migration inhibitory factor, pseudogene 81126777227126777631Rat
1583788Commd9-ps1COMM domain containing 9, pseudogene 11111426330111428933Rat
1583789Hsdl1-ps1hydroxysteroid dehydrogenase like 1, pseudogene 11108780156108781131Rat
1583791Hspa8-ps2heat shock protein family A (Hsp70) member 8, pseudogene 21102046852102047546Rat
1583792Rpl18a-ps4ribosomal protein L18A, pseudogene 41101322809101323617Rat
1583794Far1-ps1fatty acyl CoA reductase 1, pseudogene 119818881698190338Rat
1585883Fam169bfamily with sequence similarity 169, member B1121878670121968272Rat
1563506WhammWASP homolog associated with actin, golgi membranes and microtubules1135526363135557091Rat
1584548Zscan2zinc finger and SCAN domain containing 21134833701134848957Rat
1563523Dkkl1dickkopf like acrosomal protein 119569401095699259Rat
1587398Mrgprb3MAS-related GPR, member B319827080098286263Rat
1585067Trim25-ps1tripartite motif-containing 25, pseudogene 11102350230102400041Rat
1583872Il16interleukin 161137617702137718022Rat
1587416UevldUEV and lactate/malate dehyrogenase domains19745418897486004Rat
1563073Siglec8sialic acid binding Ig-like lectin 819409273794103134Rat
1583906Sarnp-ps1SAP domain containing ribonucleoprotein, pseudogene 11108457981108458724Rat
3805Syt3synaptotagmin 319488083594895518Rat
1566295Aldh16a1aldehyde dehydrogenase 16 family, member A119562672795639808Rat
1562619Izumo2IZUMO family member 219519645995209131Rat
1561206RGD1561206similar to solute carrier family 25 (mitochondrial deoxynucleotide carrier), member 191111433195111435231Rat
1566413Cldnd2claudin domain containing 219384853393851693Rat
1561972Kash5KASH domain containing 519566891895691353Rat
1566323Fan1FANCD2 and FANCI associated nuclease 11117915323117945044Rat
1562653Saxo2stabilizer of axonemal microtubules 21136596445136638445Rat
1565197Ntn5netrin 519615698596165997Rat
1560277Gdpgp1GDP-D-glucose phosphorylase 11134184095134193281Rat
1561456FancfFA complementation group F1101449120101452361Rat
1564356Cers3ceramide synthase 31120316930120422926Rat
1565099Klf13KLF transcription factor 131117505857117536626Rat
1562492Slc6a21solute carrier family 6 member 2119575425795765854Rat
1562499Sec1secretory blood group 119614339096164249Rat
1592985Entrep2endosomal transmembrane epsin interactor 21118288365118700514Rat
1589755Tyrtyrosinase1141115036141210207Rat
1587126Vom2r42vomeronasal 2 receptor, 421139549127139593601Rat
1588673Hsd17b14hydroxysteroid (17-beta) dehydrogenase 1419602929096039088Rat
1586888Ap3s2adaptor related protein complex 3 subunit sigma 21133818825133859269Rat
1592144Matr3-ps1matrin 3, pseudogene 11118609657118613368Rat
1588641Lmtk3lemur tyrosine kinase 319626105896280362Rat
1588652MamstrMEF2 activating motif and SAP domain containing transcriptional regulator19610971596116295Rat
1587090Vom2r43vomeronasal 2 receptor, 431139793253139815783Rat
1587464Spaca4sperm acrosome associated 419619551496196187Rat
1583615Magel2MAGE family member L21115880137115884680Rat
1559447Pth2parathyroid hormone 219566652595667174Rat
1587109LOC679574similar to putative pheromone receptor (Go-VN3)1139696920139763181Rat
1585733LOC682259similar to Tetraspanin-7 (Tspan-7) (Transmembrane 4 superfamily member 2) (Cell surface glycoprotein A15) (T-cell acute lymphoblastic leukemia-associated antigen 1) (TALLA-1) (Membrane component, X chromosome, surface marker 1) (CD231 antigen)...1122232825122233599Rat
1589798Gys1glycogen synthase 119591544395935292Rat
1590620Cwc15-ps1CWC15 spliceosome-associated protein, pseudogene 11119335619119336345Rat
1590913Slc25a5-ps3solute carrier family 25 member 5, pseudogene 31106191309106192280Rat
1587443Saal1serum amyloid A-like 119719868597218131Rat
1589010Naa38-ps1N(alpha)-acetyltransferase 38, NatC auxiliary subunit, pseudogene 11134093191134093669Rat
1597345Zfp141zinc finger protein 14119313057493164324Rat
1593461Klk5kallikrein related-peptidase 519429657494304768Rat
1593285Hspd1-ps7heat shock protein family D (Hsp60) member 1, pseudogene 71103645663103648170Rat
1596829Nono-ps11non-POU domain containing, octamer-binding, pseudogene 111116258765116260805Rat
1593397Klk15-ps3kallikrein-related peptidase 15, pseudogene 319449917794505830Rat
1594860Saa3serum amyloid A 319721870697222287Rat
1596020Cd33CD33 molecule19393541893940452Rat
1596870Zc3h11a-ps2zinc finger CCCH-type containing 11A, pseudogene 21116013406116016461Rat
1594161Ccdc83coiled-coil domain containing 831144167993144225622Rat
1588686Dhdhdihydrodiol dehydrogenase19595436195965262Rat
1596282Vmn2r116l-ps12vomeronasal 2, receptor 116 like, pseudogene 1219345631293545002Rat
1588614Ncr3lg1natural killer cell cytotoxicity receptor 3 ligand 119656566496581825Rat
1592887Lysmd4LysM domain containing 41120839178120845148Rat
1597332Vom2r37vomeronasal 2 receptor, 3719325799393318774Rat
1590363LOC684403similar to olfactory receptor 2901138804766138805713Rat
1593252Tead2TEA domain transcription factor 219570236695719186Rat
1592552LOC685596similar to ubiquinol-cytochrome c reductase binding protein1133425137133425500Rat
1598109Morf4l1-ps7mortality factor 4 like 1, pseudogene 71115975577115976718Rat
1591913Traf7-ps1TNF receptor associated factor 7, pseudogene 11115943129115945159Rat
1591914Ccdc137-ps1coiled-coil domain containing 137, pseudogene 11106199727106208762Rat
1591915Mrgprb2MAS-related GPR, member B219840114098403148Rat
1596692Fam174bfamily with sequence similarity 174, member B1127515393127618591Rat
1598125Vom2r-ps67vomeronasal 2 receptor, pseudogene 671140594546140625318Rat
1598292Rnd2-ps1rho family GTPase 2, pseudogene 11143925214143926854Rat
1598293Pgk1-ps7phosphoglycerate kinase 1, pseudogene 71142700683142701985Rat
1597139Idh2isocitrate dehydrogenase (NADP(+)) 21134038644134057969Rat
1597140Trpm1transient receptor potential cation channel, subfamily M, member 11117718896117835434Rat
1598667Klk5lkallikrein related-peptidase 5 like19456668894571882Rat
735155Car11carbonic anhydrase 1119616990096175191Rat
1624201Zfp715zinc finger protein 71519370600593748131Rat
1642415LOC100125384hypothetical protein LOC1001253841100300241100301711Rat
1626013Vom2r-ps66vomeronasal 2 receptor, pseudogene 661140519846140520742Rat
1626035Vom2r-ps62vomeronasal 2 receptor, pseudogene 621116129167116157652Rat
1626046Vom2r-ps63vomeronasal 2 receptor, pseudogene 631138892457138892798Rat
1641977Vom2r-ps64vomeronasal 2 receptor, pseudogene 641139409799139410704Rat
2316393Vom1r-ps67vomeronasal 1 receptor pseudogene 671131058349131059234Rat
2319766Lias-ps2lipoic acid synthetase, pseudogene 21108802590108803356Rat
2319415Spty2d1SPT2 chromatin protein domain containing 119753149597549633Rat
2320113Klk1c4kallikrein 1-related peptidase C419443457494438678Rat
2318883Snrpepl2small nuclear ribonucleoprotein polypeptide E like 21133709656133710137Rat
2320229Set-ps1Set nuclear proto-oncogene, pseudogene 119775323397797449Rat
2318412Oca2OCA2 melanosomal transmembrane protein1107116278107446093Rat
2321314Atxn1-ps1ataxin 1, pseudogene 11102516795102517889Rat
2322090Ran-ps2RAN, member RAS oncogene family, pseudogene 219864557498655680Rat
2320559LOC100361204mas-related G-protein coupled receptor member B8-like19804940998050395Rat
2322792Flt3lgFms related receptor tyrosine kinase 3 ligand19561505695620463Rat
2320676Clp1-ps1cleavage factor polyribonucleotide kinase subunit 1, pseudogene 11105449881105451267Rat
2322257LOC100360396hypothetical protein LOC1003603961128028275128028907Rat
2320729Rchy1-ps1ring finger and CHY zinc finger domain containing 1, pseudogene 11137830459137831886Rat
2322933Srsf7-ps1serine and arginine rich splicing factor 7, pseudogene 11124210206124239378Rat
2322334Cdca4-ps2cell division cycle associated 4, pseudogene 21140183390140192383Rat
2320865Atxn1-ps2ataxin 1, pseudogene 21103672445103674674Rat
2323071Dcaf12-ps1DDB1 and CUL4 associated factor 12, pseudogene 11123731057123733750Rat
2322541Mrgprb13-ps1MAS-related GPR, member B13, pseudogene 119800209198004379Rat
2321863FanciFA complementation group I1133327264133383661Rat
2321127LOC100360933cDNA sequence BC048679-like1135445623135449427Rat
2321930Grb2-ps1growth factor receptor bound protein 2, pseudogene 119301652893018833Rat
2321947Brcc3-ps2BRCA1/BRCA2-containing complex, subunit 3, pseudogene 21140762660140885589Rat
2320478Hsp90ab1-ps1heat shock protein 90 alpha family class B member 1, pseudogene 11105948734105951090Rat
2320494Snrpa1small nuclear ribonucleoprotein polypeptide A'1119641402119654653Rat
2324488Siglecl1SIGLEC family like 119390224493924811Rat
4888565Mir344a-2microRNA 344a-21115243128115243234Rat
2325398Mir8microRNA 81132806420132806514Rat
2325455Mir150microRNA 15019560502495605108Rat
2325463Mir9-3microRNA 9-31133440049133440138Rat
2325549Mir211microRNA 2111117777539117777644Rat
2325614Mir344-1microRNA 344-11115306861115306958Rat
2324099Rps19-ps10ribosomal protein S19, pseudogene 101142882999142883492Rat
4888550Mir344b-1microRNA 344b-11114623759114623856Rat
4888559Mir3597-3microRNA 3597-31133440038133440152Rat
6486569Mrgprb13-ps2MAS-related GPR, member B13, pseudogene 219803228298033552Rat
6488322LOC100912195protein BEX1-like1110047861110051812Rat
6489367Vmn2r116l-ps26vomeronasal 2, receptor 116 like, pseudogene 261138892454138912931Rat
6485855LOC100912659zinc finger protein 709-like19301903793038483Rat
6491878LOC100911574uncharacterized LOC10091157419752264197528961Rat
6485222Vmn2r116l-ps1vomeronasal 2, receptor 116 like, pseudogene 11139671255139673942Rat
6485832Klk15-ps1kallikrein-related peptidase 15, pseudogene 119453388994545793Rat
6485896LOC100912683zinc finger protein 709-like19360728693628363Rat
6490831Dynll1-ps2dynein light chain LC8-type 1, pseudogene 21106682223106683617Rat
6486156LOC100912656zinc finger protein 91-like19294305992949011Rat
6491275Rhoq-ps1ras homolog family member Q, pseudogene 11106623061106624411Rat
6498800Rps4x-ps10ribosomal protein S4, X-linked, pseudogene 101140897229140897968Rat
6498966Ybx1-ps5Y box binding protein 1, pseudogene 51102225955102229984Rat
6495781LOC10091088860S ribosomal protein L36-like1129764986129765341Rat
6496163Luzp2leucine zipper protein 21105597291105983605Rat
6499723Ldha-ps1lactate dehydrogenase A, pseudogene 11140009867140010890Rat
6499943Ldha-ps12lactate dehydrogenase A, pseudogene 121140025282140027726Rat
6496810Ecsit-ps1ECSIT signaling integrator, pseudogene 11104502481104503645Rat
6500406Gfygolgi-associated, olfactory signaling regulator19566162195665300Rat
6500416Ftl1-ps1ferritin light chain 1, pseudogene 11100923579100924459Rat
6503647Rbm4b-ps1RNA binding motif protein 4B, pseudogene 11113739597113740013Rat
6500871LOC100909904uncharacterized LOC10090990419497365794977869Rat
7489047Scarna15small Cajal body-specific RNA 151135484620135484683Rat
7489017Mir344gmicroRNA 344g1115343044115343122Rat
7500992LOC102547416uncharacterized LOC1025474161132796668132801878Rat
7489023Mir344imicroRNA 344i1115426210115426308Rat
7518732LOC102552287uncharacterized LOC1025522871103583677103601779Rat
7541917Zfp658zinc finger protein 65819399246794005689Rat
7508565LOC102548323uncharacterized LOC1025483231116995976117064301Rat
7530616LOC102555346homeobox protein unc-4 homolog1133431075133469302Rat
7499284LOC102550036uncharacterized LOC1025500361144050618144056394Rat
7510373LOC102552825uncharacterized LOC1025528251137282138137284054Rat
7510716LOC102556967zinc finger protein 484-like19399801894027342Rat
7511549LOC102555775uncharacterized LOC1025557751114637762114649714Rat
7512548LOC102552153uncharacterized LOC1025521531103510363103575329Rat
7537804LOC102553800uncharacterized LOC1025538001131429410131442617Rat
7612387LOC102549305uncharacterized LOC1025493051119375739119389971Rat
7612505LOC102552286formyl peptide receptor-related sequence 4-like19474795394749932Rat
7631858Fbxw11-ps1F-box and WD repeat domain containing 11, pseudogene 11116428735116431543Rat
7648907LOC102547415uncharacterized LOC1025474151115720505115726234Rat
7634635LOC102555470uncharacterized LOC1025554701114294070114303084Rat
7634877LOC102554078uncharacterized LOC1025540781126851551126852404Rat
7650527LOC102555617uncharacterized LOC1025556171114440731114448803Rat
7651195LOC102550061uncharacterized LOC10255006119382681793836987Rat
7636379LOC102552634uncharacterized LOC10255263419734491797365236Rat
7636386LOC102552731uncharacterized LOC10255273119471361394730846Rat
7638459LOC102548889uncharacterized LOC1025488891134114350134128483Rat
7625414LOC102549852ferritin light chain 1-like1143810386143811096Rat
7577468LOC102549616uncharacterized LOC1025496161119804731119844038Rat
7625624LOC102548601uncharacterized LOC1025486011117601030117605930Rat
7641285LOC102554680uncharacterized LOC1025546801142018187142025944Rat
7628264LOC102556190uncharacterized LOC10255619019604107496047337Rat
7609569LOC102555928uncharacterized LOC1025559281135445291135469930Rat
7643677LOC102556513uncharacterized LOC1025565131135894458135909734Rat
7660362LOC102551177uncharacterized LOC1025511771110294734111035350Rat
7661531LOC102553329uncharacterized LOC1025533291124017749124165290Rat
7555854LOC102556043zinc finger protein 120-like19365524793675372Rat
7569258LOC102549468uncharacterized LOC1025494681119410495119429149Rat
7590296LOC102549117uncharacterized LOC1025491171134186182134213438Rat
7591504LOC102551255tetraspanin-7-like1122231176122236101Rat
7572872Sf3a1-ps1splicing factor 3A subunit 1, pseudogene 11141432976141436428Rat
7573144Vmn2r116l-ps29vomeronasal 2, receptor 116 like, pseudogene 291139496211139515315Rat
7544215Vmn2r116l-ps27vomeronasal 2, receptor 116 like, pseudogene 271140688438140712736Rat
7544339LOC102555866uncharacterized LOC1025558661114688298114932765Rat
7557291Ctxnd1cortexin domain containing 11138495689138547105Rat
7545650LOC102548067uncharacterized LOC1025480671116271482116447353Rat
7557829Klk15-ps2kallikrein-related peptidase 15, pseudogene 219458801894594577Rat
7580217Snrpb-ps1small nuclear ribonucleoprotein polypeptides B and B1, pseudogene 11115304693115305592Rat
7550309LOC102549783uncharacterized LOC1025497831143533778143534759Rat
7565709LOC102553801uncharacterized LOC1025538011134346919134348781Rat
7554390LOC102547214uncharacterized LOC1025472141119348252119351951Rat
7554600LOC102548818uncharacterized LOC1025488181134107741134110798Rat
7692197LOC102547943uncharacterized LOC1025479431133414486133421488Rat
7676282LOC102553862uncharacterized LOC1025538621132019641132025235Rat
7676646LOC102548730uncharacterized LOC1025487301110158663110291293Rat
7677078LOC102547183uncharacterized LOC1025471831111060102111095607Rat
7683637LOC102553173uncharacterized LOC1025531731123943804123994246Rat
7690508Klk5l-ps1kallikrein related-peptidase 5 like, pseudogene 119447831494489098Rat
7683193LOC102549532uncharacterized LOC1025495321119755503119777201Rat
7730966LOC102552387uncharacterized LOC1025523871102647014102669486Rat
7731725LOC102552485uncharacterized LOC10255248519471984694730038Rat
7736966LOC10255718260S ribosomal protein L31-like19998035899982992Rat
7740165LOC102551020uncharacterized LOC1025510201122088458122164766Rat
7667275LOC102546874prostate-specific antigen-like19442608394428521Rat
7716912Prdx3-ps1peroxiredoxin 3, pseudogene 11106775624106776566Rat
7742101LOC102547609uncharacterized LOC1025476091132868748132874634Rat
7697895LOC102546835uncharacterized LOC1025468351115475057115720360Rat
7698364LOC102553828spermatogenesis-associated protein 13-like1126159731126164254Rat
7701959LOC102555672zinc finger protein 850-like19317257593197706Rat
7721677LOC102546680uncharacterized LOC1025466801119181972119185546Rat
7747342LOC102546796uncharacterized LOC10254679619941626999427141Rat
7748347Epb41l5-ps1erythrocyte membrane protein band 4.1 like 5, pseudogene 119658515196588057Rat
7748684Eif5-ps5eukaryotic translation initiation factor 5, pseudogene 51141500532141507333Rat
7709422Gapdh-ps69Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 691129758471129759490Rat
7750416Mgat4a-ps1alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A, pseudogene 11113857991113864613Rat
7709992Csde1-ps1cold shock domain containing E1, pseudogene 11101128263101131688Rat
7728972LOC102548165uncharacterized LOC1025481651116963210116996324Rat
9089371LOC103691176U6 snRNA-associated Sm-like protein LSm5 pseudogene1136277978136278822Rat
9136205LOC103691157uncharacterized LOC1036911571121055568121061214Rat
9101016C1H19orf84chromosome 1 open reading frame, human C19orf8419383534693837316Rat
9191646LOC103691162uncharacterized LOC1036911621126477043126482167Rat
9198344LOC103691146uncharacterized LOC1036911461114303744114386780Rat
9202400LOC103691107NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene19414821794148671Rat
9170070LOC103691133prostate-specific antigen-like19468179094685589Rat
9086567LOC103691112uncharacterized LOC10369111219609167296095896Rat
9349711LOC103691192twinkle protein, mitochondrial pseudogene1140480642140482788Rat
9273422Mrps18c-ps2mitochondrial ribosomal protein S18C, pseudogene 21122176761122177564Rat
9273863LOC103691188uncharacterized LOC1036911881143422289143529944Rat
9229744LOC10369119360S acidic ribosomal protein P1-like1140289186140294946Rat
9322177LOC103691165uncharacterized LOC1036911651129637017129655422Rat
9383371Snrnp48-ps1small nuclear ribonucleoprotein U11/U12 subunit 48, pseudogene 11135339418135340186Rat
9283938Rhog-ps3ras homolog family member G, pseudogene 31111125687111208473Rat
9249251LOC103691177histone H2A.Z pseudogene1127473174127484619Rat
9421087LOC103691109uncharacterized LOC10369110919474463594746122Rat
9468236LOC103691168uncharacterized LOC1036911681132680421132684321Rat
9396007LOC103691178chromobox protein homolog 3 pseudogene1134672915134675115Rat
11360285LOC108349006uncharacterized LOC1083490061118086884118095930Rat
11462077LOC108349447uncharacterized LOC1083494471134385420134400570Rat
11463533LOC108349586uncharacterized LOC1083495861119287967119293388Rat
11465891LOC108349461uncharacterized LOC1083494611103443363103460555Rat
11468718Rpl21-ps25ribosomal protein L21, pseudogene 251124344834124345343Rat
11471669LOC108348727uncharacterized LOC1083487271106824340106838875Rat
11436035Rpl27a-ps3ribosomal protein L27a,pseudogene 31133096265133099871Rat
11360778LOC108349578uncharacterized LOC1083495781106891465106904101Rat
11360787Klk5l-ps3kallikrein related-peptidase 5 like, pseudogene 319439464594397275Rat
11452860Igsf22immunoglobulin superfamily member 2219760193897618144Rat
11453258LOC10834928260S ribosomal protein L7a pseudogene19756832397570107Rat
11432987LOC108349234uncharacterized LOC1083492341121251718121271532Rat
11416078Rps27-ps3ribosomal protein S27, pseudogene 31121382010121384687Rat
11422984LOC10834976860S ribosomal protein L29-like1108838092108838388Rat
11397546LOC108349597uncharacterized LOC1083495971130040995130043791Rat
11409293LOC108348964uncharacterized LOC1083489641106125962106135332Rat
11388338LOC108349570uncharacterized LOC10834957019491568094923655Rat
11400164LOC108349762kallikrein-1E2-like19465235394669527Rat
11411641LOC108349814high mobility group protein B1-like1130158350130158821Rat
11393548LOC10834888060S ribosomal protein L34 pseudogene1106354560106354913Rat
11519974Trnae-uuc1transfer RNA glutamic acid (anticodon UUC) 11109313144109313215Rat
11501622LOC10834944660S ribosomal protein L35a pseudogene1134302904134303425Rat
11503776LOC108349102uncharacterized LOC1083491021138189940138213720Rat
11503785Trnar-ucg1transfer RNA arginine (anticodon UCG) 11133399712133399784Rat
11496573Gpr32G protein-coupled receptor 3219475686394757895Rat
11513757Envl-ps17MLV-related proviral Env polyprotein-like, pseudogene 171143803658143805876Rat
11495179LOC108353803uncharacterized LOC1083538031108947890108957080Rat
11517459LOC10834984960S ribosomal protein L7a pseudogene1129755848129757145Rat
11489695LOC108349848thymosin beta-10 pseudogene1121497670121498138Rat
14398600Mir344b-3microRNA mir-344b-31114632635114632705Rat
14398575Mir344b-2microRNA mir-344b-21114616603114616673Rat
41320917Pin4-ps6peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 61133647167133647563Rat
41321796LOC120100238small nucleolar RNA SNORD1151110292739110292816Rat
41322133LOC120100253small nucleolar RNA SNORD1151110267359110267436Rat
41354060LOC120100333small nucleolar RNA SNORD1161110995192110995284Rat
41378320LOC120099804uncharacterized LOC12009980419503646495038103Rat
41378349LOC120099809serum amyloid A-5 protein-like19725763797259953Rat
41379051LOC120097195uncharacterized LOC12009719519897279298986217Rat
41379493LOC120100278U1 spliceosomal RNA1104816658104816811Rat
41085628LOC120100308small nucleolar RNA SNORD1161110997780110997872Rat
41110788LOC120099872uncharacterized LOC1200998721136914913136919922Rat
41138645Rnu1-18RNA, U1 small nuclear 181131845667131845829Rat
41202669LOC120100280small nucleolar RNA SNORD1151110301514110301588Rat
41322568LOC120100492small nucleolar RNA U31117570637117570845Rat
41323105LOC120100254small nucleolar RNA SNORD1151110269195110269271Rat
41356364LOC120100313small nucleolar RNA SNORD1161110479954110480046Rat
41380632LOC120100443U2 spliceosomal RNA1140724802140724998Rat
41087592LOC120099823uncharacterized LOC1200998231108581448108596320Rat
41088730Trnaa-agc79transfer RNA alanine (anticodon AGC) 791126350554126350634Rat
41113286LOC120100277small nucleolar RNA SNORD1151110290902110290979Rat
41113608LOC120100250small nucleolar RNA SNORD1151110257081110257158Rat
41204376LOC120099858uncharacterized LOC1200998581127620887127636745Rat
41276984LOC120099811uncharacterized LOC12009981119738112397383728Rat
41284145Pole3-ps1DNA polymerase epsilon 3, accessory subunit, pseudogene 11107341034107356298Rat
41324388LOC120100247small nucleolar RNA SNORD1151110251568110251645Rat
41324480LOC120099827uncharacterized LOC1200998271113551559113562494Rat
41357392LOC120100282small nucleolar RNA SNORD1151110299683110299760Rat
41357901Snord35bsmall nucleolar RNA, C/D box 35B19560651095606596Rat
41382752LOC120099829uncharacterized LOC1200998291114066134114087090Rat
41089556Rpl13-ps4ribosomal protein L13, pseudogene 41128596532128600414Rat
41141871LOC120099870uncharacterized LOC1200998701133872984133879902Rat
41279059LOC120100281small nucleolar RNA SNORD1151110296410110296487Rat
41279797Cul4b-ps1cullin 4B, pseudogene 11133574646133575249Rat
41142208LOC120100299small nucleolar RNA SNORD1161110956744110956836Rat
41142333Odc1-ps8ornithine decarboxylase 1, pseudogene 81109953728109955186Rat
41172425LOC120097118uncharacterized LOC12009711819540532695413983Rat
41206771LOC120100249small nucleolar RNA SNORD1151110255243110255320Rat
41207249LOC120099846uncharacterized LOC1200998461122107156122110562Rat
41207608LOC120099798interferon-stimulated 20 kDa exonuclease-like 219369267493701377Rat
41252911Trnas-aga17transfer RNA serine (anticodon AGA) 1719601179096011864Rat
41253898LOC120100276small nucleolar RNA SNORD1151110178175110178252Rat
41279909LOC120099828uncharacterized LOC1200998281113610948113657836Rat
41280435LOC120099807uncharacterized LOC12009980719706626697067508Rat
41326489LOC120099800uncharacterized LOC12009980019394311893954490Rat
41327125LOC120099822uncharacterized LOC1200998221108030936108068757Rat
41117170LOC120099857uncharacterized LOC1200998571127569126127570853Rat
41118317LOC120100220U7 small nuclear RNA1141121136141121197Rat
41093297LOC120100213U7 small nuclear RNA1106488765106488826Rat
41118856LOC120100471small nucleolar RNA SNORD8819473460494734693Rat
41119470LOC120100326small nucleolar RNA SNORD1161110487777110487869Rat
41147859Rpl29-ps8ribosomal protein L29, pseudogene 81139956373139958279Rat
41175336Brix1-ps1biogenesis of ribosomes BRX1, pseudogene 11129680951129683336Rat
41261573Rpl29-ps9ribosomal protein L29, pseudogene 91121491251121497854Rat
41329310Dnajb6-ps5DnaJ heat shock protein family (Hsp40) member B6, pseudogene 51103619537103621184Rat
41330022LOC120099856uncharacterized LOC1200998561127413163127418868Rat
41362827LOC120099879uncharacterized LOC1200998791143604795143623271Rat
41364047LOC120099841uncharacterized LOC1200998411119204501119209290Rat
41389408LOC120098457kallikrein-2-like19451814894532064Rat
41389607Ipmk-ps1inositol polyphosphate multikinase, pseudogene 11127578732127592426Rat
41148090LOC120100271small nucleolar RNA SNORD1151110303346110303423Rat
41148932LOC120097122uncharacterized LOC12009712219560508895605871Rat
41176080LOC120100323small nucleolar RNA SNORD1161111002979111003070Rat
41176983LOC120100210U7 small nuclear RNA1106488917106488976Rat
41211402LOC120100312small nucleolar RNA SNORD1161110982423110982515Rat
41212243LOC120099837uncharacterized LOC1200998371117663708117665914Rat
41262615LOC120099810uncharacterized LOC12009981019723686397242294Rat
41341971LOC120100412small nucleolar RNA SNORA171136970981136971112Rat
41364498Snord88bsmall nucleolar RNA, C/D box 88B19473493794735027Rat
41391087LOC120097812uncharacterized LOC1200978121136871425136877196Rat
41122044LOC120100336small nucleolar RNA SNORD1161111034987111035076Rat
41178707LOC120099844uncharacterized LOC1200998441121313138121320010Rat
41188763LOC120099874uncharacterized LOC1200998741138184016138185964Rat
41189502LOC120099875uncharacterized LOC1200998751139870107139920602Rat
41342901LOC120100321small nucleolar RNA SNORD1161110985002110985094Rat
41343058Gapdh-ps53Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 5319962205599623687Rat
41366411LOC120100318small nucleolar RNA SNORD1161110990216110990308Rat
41393201LOC120097268uncharacterized LOC1200972681110123926110128015Rat
41098464LOC120100402small nucleolar RNA SNORA481118424802118424943Rat
41123320LOC120100240small nucleolar RNA SNORD1151110208959110209036Rat
41154963Rpf1-ps1ribosome production factor 1, pseudogene 119479819794800311Rat
41179128LOC120099866uncharacterized LOC1200998661133470652133492131Rat
41179479LOC120099864uncharacterized LOC1200998641132956992132959786Rat
41179831LOC120100444small nucleolar RNA SNORA171108932965108933098Rat
41214457LOC120100258small nucleolar RNA SNORD1151110285396110285473Rat
41215033LOC120099816uncharacterized LOC1200998161101705741101715040Rat
41266353Snord64small nucleolar RNA, C/D box 641111094909111094975Rat
41287726LOC120099820uncharacterized LOC1200998201106874665106884693Rat
41343720LOC120097791uncharacterized LOC1200977911127962107127984875Rat
41099787LOC120099801uncharacterized LOC12009980119405836294073333Rat
41344751LOC120099852uncharacterized LOC1200998521126926159126934246Rat
41345270LOC120100296small nucleolar RNA SNORD1161110946457110946549Rat
41395739Nsa2-ps7NSA2 ribosome biogenesis factor, pseudogene 71100469200100469968Rat
41396804LOC120100331small nucleolar RNA SNORD1161110462563110462655Rat
41397269LOC120100315small nucleolar RNA SNORD1161110492982110493074Rat
41102144LOC120099881uncharacterized LOC1200998811143972005143976631Rat
41158753LOC120100275small nucleolar RNA SNORD1151110193908110193985Rat
41194366LOC120100356U2 spliceosomal RNA1140302978140303142Rat
41217347H2aj-ps1Histone H2A.J, pseudogene 119357763693581219Rat
41218166LOC120100310small nucleolar RNA SNORD1161110972130110972222Rat
41268507LOC120100283small nucleolar RNA SNORD1151110182787110182865Rat
41269839Rpl6-ps17ribosomal protein L6, pseudogene 171107702837107711388Rat
41290328LOC120098456uncharacterized LOC12009845619412461594127467Rat
41345916LOC120100259small nucleolar RNA SNORD1151110225775110225852Rat
41347527Rnu6-1195RNA, U6 small nuclear 11951106391996106392102Rat
41347657LOC120099849uncharacterized LOC1200998491122862073122867551Rat
41070218LOC120099817uncharacterized LOC1200998171102476477102497194Rat
41103596LOC120100298small nucleolar RNA SNORD1161110954171110954263Rat
41127338LOC120100339small nucleolar RNA Z195/SNORD33/SNORD32 family19561122295611304Rat
41160684LOC120097191uncharacterized LOC12009719119878694098797373Rat
41185069LOC120100292small nucleolar RNA SNORD1151110197442110197520Rat
41219816LOC120099853uncharacterized LOC1200998531127336589127338218Rat
41270785LOC120099835uncharacterized LOC1200998351115260536115267750Rat
41292810Snord88csmall nucleolar RNA, C/D box 88C19473215594732245Rat
41104542LOC120100266small nucleolar RNA SNORD1151110223936110224013Rat
41129480LOC120097803uncharacterized LOC1200978031132925214132928678Rat
41271806Trnaa-agc61transfer RNA alanine (anticodon AGC) 611100836137100836210Rat
41401400LOC120099834uncharacterized LOC1200998341115051743115085815Rat
41073030LOC120100252small nucleolar RNA SNORD1151110260759110260836Rat
41081049LOC120100325small nucleolar RNA SNORD1161110485165110485257Rat
41130772LOC120100269small nucleolar RNA SNORD1151110214472110214549Rat
41198576LOC120097768uncharacterized LOC1200977681109198620109204581Rat
41230808LOC120099812uncharacterized LOC12009981219738377897386285Rat
41272992LOC120097339uncharacterized LOC1200973391120764055120770141Rat
41294442Snord35asmall nucleolar RNA, C/D box 35A19561018595610264Rat
41294589LOC120100468small nucleolar RNA SNORA761135499682135499825Rat
41107913LOC120100309small nucleolar RNA SNORD1161110959315110959407Rat
41108358LOC120100291small nucleolar RNA SNORD1151110322055110322131Rat
41131359LOC120099805uncharacterized LOC12009980519620891396218323Rat
41131410LOC120100171U6 spliceosomal RNA19359441593594521Rat
41164166LOC120100400small nucleolar RNA SNORA481129979431129979573Rat
41200237LOC120100330small nucleolar RNA SNORD1161110495552110495645Rat
41275464LOC120097162uncharacterized LOC12009716219584503395849118Rat
41296176LOC120097775uncharacterized LOC1200977751115747262115755253Rat
41296445LOC120100337small nucleolar RNA SNORD1161111037433111037527Rat
41296733LOC120100341small nucleolar RNA SNORA701121176393121176525Rat
41296992LOC120100302small nucleolar RNA SNORD1161110964463110964555Rat
41352397Hmgb1-ps32high-mobility group box 1, pseudogene 3219797329497974178Rat
41084506LOC120099825uncharacterized LOC1200998251111424659111494106Rat
41084950LOC120100317small nucleolar RNA SNORD1161110469365110469457Rat
41110617LOC120100270small nucleolar RNA SNORD1151110210797110210874Rat
41136282LOC120100464small nucleolar RNA SNORA401119956733119956858Rat
41166428LOC120100376small nucleolar RNA SNORA2/SNORA34 family1104515030104515165Rat
41166596LOC120100265small nucleolar RNA SNORD1151110308960110309037Rat
41200941LOC120100407small nucleolar RNA SNORA481134251885134252021Rat
41201666LOC120099876uncharacterized LOC1200998761140041222140055037Rat
41202226LOC120100150U6 spliceosomal RNA1106789754106789860Rat
41233470LOC120100301small nucleolar RNA SNORD1161110961886110961978Rat
41233713LOC120099880uncharacterized LOC1200998801143975541143984048Rat
41234278LOC120100290small nucleolar RNA SNORD1151110184594110184670Rat
40945041Trnaa-agc69transfer RNA alanine (anticodon AGC) 6919497229894972372Rat
40971092LOC120100305small nucleolar RNA SNORD1161110974703110974795Rat
40996824LOC120100273small nucleolar RNA SNORD1151110315578110315662Rat
40946633LOC120100304small nucleolar RNA SNORD1161110969611110969703Rat
40973162LOC120100241small nucleolar RNA SNORD1151110240543110240620Rat
40973358LOC120100244small nucleolar RNA SNORD1151110247891110247968Rat
41015843LOC120100242small nucleolar RNA SNORD1151110244217110244294Rat
40950485Snx4-ps1sorting nexin 4, pseudogene 11118719465118723782Rat
40974504Rps29-ps9ribosomal protein S29, pseudogene 91119451277119451561Rat
40974846LOC120099877uncharacterized LOC1200998771143084390143109270Rat
40975001LOC120099854uncharacterized LOC1200998541127347845127351622Rat
41341028Rpl26l1-ps1ribosomal protein L26-like 1, pseudogene 11134875225134875637Rat
40952192LOC120099808uncharacterized LOC12009980819712204697126401Rat
40976304LOC120100448small nucleolar RNA SNORA171123620368123620504Rat
40977331Mrgprb4-ps1MAS-related GPR, member B4, pseudogene 119797848197980262Rat
41012795LOC120100470small nucleolar RNA SNORD8819473429994734388Rat
41012988LOC120100329small nucleolar RNA SNORD1161110979851110979943Rat
41013486Rpl36-ps8ribosomal protein L36, pseudogene1117148209117148529Rat
40926109LOC120097340uncharacterized LOC1200973401120775852120778917Rat
40953130LOC12009778560S ribosomal protein L27-like1124728576124728938Rat
40953491LOC120100293small nucleolar RNA SNORD1151110200168110200253Rat
40978721LOC120099868uncharacterized LOC1200998681133652575133654456Rat
41015411LOC120100324small nucleolar RNA SNORD1161110482541110482633Rat
40927059LOC120100340small nucleolar RNA SNORD3419561043295610498Rat
40927834LOC120100306small nucleolar RNA SNORD1161110977274110977366Rat
40928160LOC120100303small nucleolar RNA SNORD1161110967037110967129Rat
40956054LOC120100387U2 spliceosomal RNA1113515184113515344Rat
40979199LOC120100272small nucleolar RNA SNORD1151110307020110307096Rat
40979258LOC120097159uncharacterized LOC12009715919570437495707794Rat
40999106LOC120100332small nucleolar RNA SNORD1161111005695111005787Rat
40999933LOC120100494U4 spliceosomal RNA1121936095121936219Rat
40929172LOC120099842uncharacterized LOC1200998421119297968119315737Rat
40957095Rpl7a-ps34ribosomal protein L7a, pseudogene 341117339434117347725Rat
40982279Pnpla8-ps1patatin-like phospholipase domain containing 8, pseudogene 11138732722138759449Rat
41001342LOC120100413small nucleolar RNA SNORA171142114137142114268Rat
41002066LOC120099839uncharacterized LOC1200998391118747408118781774Rat
40931072LOC120099850uncharacterized LOC1200998501123918082123925951Rat
40958364LOC120100454U2 spliceosomal RNA1133230750133230898Rat
40982950LOC120100285small nucleolar RNA SNORD1151110238704110238780Rat
40983394LOC120100261small nucleolar RNA SNORD1151110271033110271110Rat
40983475LOC120100257small nucleolar RNA SNORD1151110287232110287309Rat
40983518LOC120100263small nucleolar RNA SNORD1151110236867110236944Rat
41003782LOC120099862uncharacterized LOC1200998621132785368132793311Rat
40933693Trnap-gggtransfer RNA proline (anticodon GGG)19606763996067719Rat
40960636LOC120099882uncharacterized LOC1200998821144242152144268371Rat
40984706Snrpc-ps10small nuclear ribonucleoprotein polypeptide C, pseudogene 101137642550137643027Rat
40985241Vmn2r116l-ps15vomeronasal 2, receptor 116 like, pseudogene 151139595637139617784Rat
41004471LOC120097182uncharacterized LOC12009718219602475096033425Rat
40935431LOC120099815uncharacterized LOC1200998151101354768101380898Rat
40987078LOC120100297small nucleolar RNA SNORD1161110949030110949122Rat
41008579LOC120097338uncharacterized LOC1200973381118247652118262726Rat
40938955LOC120100316small nucleolar RNA SNORD1161111000373111000465Rat
40939292LOC120100115U4 spliceosomal RNA19955785499557970Rat
40964065LOC120099806uncharacterized LOC12009980619689199996904056Rat
40964929LOC120100151U6 spliceosomal RNA1103004250103004356Rat
40990384Rnu6-658RNA, U6 small nuclear 65819361098493611083Rat
40940142LOC120099878uncharacterized LOC1200998781143707970143731710Rat
40966335LOC120100251small nucleolar RNA SNORD1151110258920110258997Rat
40941743LOC120100286small nucleolar RNA SNORD1151110311820110311899Rat
40943119LOC120100274small nucleolar RNA SNORD1151110242382110242458Rat
40994046LOC120099799uncharacterized LOC12009979919387125693874563Rat
40943754LOC120100307small nucleolar RNA SNORD1161110987576110987668Rat
40943837LOC120100279small nucleolar RNA SNORD1151110305181110305258Rat
40943897LOC120100268small nucleolar RNA SNORD1151110212636110212713Rat
41047128LOC120099826uncharacterized LOC1200998261113454803113493548Rat
41074683LOC120099813uncharacterized LOC12009981319769140697706639Rat
41311430LOC120100294small nucleolar RNA SNORD1161110951599110951691Rat
41312538Atp5mpl-ps1ATP synthase membrane subunit 6.8PL, pseudogene 11133428758133429123Rat
41024969LOC120099847uncharacterized LOC1200998471122285441122312506Rat
41048269LOC120099818uncharacterized LOC1200998181103031956103034632Rat
41049276Trnap-agg45transfer RNA proline (anticodon AGG) 4519541589095415964Rat
41049822Rnu6-946RNA, U6 small nuclear 9461135620777135620883Rat
41077517LOC120099851uncharacterized LOC1200998511124972989125042272Rat
41077533LOC120100327small nucleolar RNA SNORD1161110490401110490493Rat
41245754LOC120099832uncharacterized LOC1200998321114959031114995314Rat
41050960LOC120099861uncharacterized LOC1200998611132181245132187438Rat
41079516LOC120100288small nucleolar RNA SNORD1151110189568110189645Rat
41247311LOC120100287small nucleolar RNA SNORD1151110313740110313816Rat
41247317LOC120099836uncharacterized LOC1200998361115277512115283051Rat
41247581LOC120099863uncharacterized LOC1200998631132800647132808007Rat
41248172Klk5l-ps2kallikrein related-peptidase 5 like, pseudogene 219460846594612477Rat
41029545LOC120099819uncharacterized LOC1200998191105731072105743435Rat
41248427LOC120099831uncharacterized LOC1200998311114615464114620387Rat
41255323Trnap-agg47transfer RNA proline (anticodon AGG) 471118957548118957629Rat
41332605Snord33small nucleolar RNA, C/D box 3319561069995610783Rat
41054606Snord107small nucleolar RNA, C/D box 1071111099306111099377Rat
41143699LOC120099855uncharacterized LOC1200998551127368228127374172Rat
41143867LOC120099848uncharacterized LOC1200998481122441489122510976Rat
41338037LOC120100255small nucleolar RNA SNORD1151110294577110294654Rat
41338298LOC120100260small nucleolar RNA SNORD1151110227613110227690Rat
41257043Actg1-ps11actin, gamma 1, pseudogene 111128530958128550705Rat
41335386LOC120100237small nucleolar RNA SNORD1151110289065110289142Rat
41336186LOC120100222U7 small nuclear RNA1141120935141120995Rat
41153489LOC120100164U6 spliceosomal RNA1105964547105964651Rat
41297840LOC120099802uncharacterized LOC12009980219408646494092553Rat
41297869LOC120100284small nucleolar RNA SNORD1151110186394110186471Rat
41317864LOC120100248small nucleolar RNA SNORD1151110253404110253481Rat
41223203LOC120099845uncharacterized LOC1200998451121525414121534845Rat
41298225LOC120093062mas-related G-protein coupled receptor member B8-like19805785298058838Rat
41033562LOC120100264small nucleolar RNA SNORD1151110180033110180111Rat
41034538Trnap-agg55transfer RNA proline (anticodon AGG) 551120030751120030832Rat
41060898LOC120099814uncharacterized LOC1200998141101052794101087616Rat
41224851LOC120100335small nucleolar RNA SNORD1161110992583110992674Rat
41301263Ptp4a1-ps2protein tyrosine phosphatase 4A1, pseudogene 21143359417143360017Rat
41337281LOC120100320small nucleolar RNA SNORD1161111014871111014964Rat
41061314LOC120100421small nucleolar RNA SNORA171109086517109086648Rat
41062554LOC120100372small nucleolar RNA SNORA441135195011135195135Rat
41226711LOC120099840uncharacterized LOC1200998401118932104118936851Rat
41235310LOC120100314small nucleolar RNA SNORD1161110477332110477424Rat
41303197LOC120100243small nucleolar RNA SNORD1151110246052110246129Rat
41303997LOC120099860uncharacterized LOC1200998601131469335131484623Rat
41016316LOC120100236small nucleolar RNA SNORD1151110283559110283636Rat
41064894LOC120100295small nucleolar RNA SNORD1161110498125110498217Rat
41236265LOC120100246small nucleolar RNA SNORD1151110249730110249807Rat
41236487Dnajb6-ps3DnaJ heat shock protein family (Hsp40) member B6, pseudogene 31102565949102567063Rat
41304028LOC120097335high mobility group nucleosome-binding domain-containing protein 5-like1117222188117224158Rat
41304089LOC120100239small nucleolar RNA SNORD1151110272865110272942Rat
41041741LOC120100361small nucleolar RNA SNORA151136662596136662746Rat
41237530LOC120100125U6 spliceosomal RNA1124419603124419709Rat
41019099LOC120100465U2 spliceosomal RNA1137371689137371783Rat
41042766LOC120099871protein shisa-like-1a1134296708134298626Rat
41042878LOC120100262small nucleolar RNA SNORD1151110190139110190216Rat
41067967Rnu6-891RNA, U6 small nuclear 8911138601694138601800Rat
41068534LOC120099869uncharacterized LOC1200998691133590983133598028Rat
41069108LOC120097222uncharacterized LOC12009722219982886399830975Rat
41239287LOC120099830uncharacterized LOC1200998301114155536114162109Rat
41241885LOC120100156U1 spliceosomal RNA1128006617128006780Rat
41309315LOC120100235small nucleolar RNA SNORD1151110274700110274777Rat
41022847LOC120099833uncharacterized LOC1200998331115011988115017347Rat
41023737LOC120100319small nucleolar RNA SNORD1161110467179110467271Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10613D1Arb103901108698333108698726Ratregion
10839D1Wox1812419464443594644553Ratregion
33870D1Mit172131126242834126243023Ratregion
33959D1Mit31311144267353144267490Ratregion
33959D1Mit31311144267353144267916Ratregion
34134D1Mgh11421118944747118944897Ratregion
34258D1Mgh3510719846236998462476Ratregion
34258D1Mgh3510719846236998463159Ratregion
34381D1Mgh71451106047847106047988Ratregion
11439D1Mit3018219449444094494763Ratregion
11439D1Mit3018219449457994494763Ratregion
33686D1Mit112691102268556102268831Ratregion
36001D1Rat1051451122553297122553440Ratregion
36007D1Rat361361127453884127454022Ratregion
36023D1Rat381711131763437131763614Ratregion
36227D1Rat461681143011775143011955Ratregion
37208D1Rat1992391134932150134932391Ratregion
37248D1Rat2222011100045425100045634Ratregion
37344D1Rat2062031100125741100125944Ratregion
37428D1Rat2002341125611501125611741Ratregion
37518D1Rat1342451133634986133635219Ratregion
35220D1Rat291471102813953102814117Ratregion
35234D6Rat451471118178778118178919Ratregion
35268D1Rat341701114466166114466337Ratregion
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Position Markers

Flank 1: (D1Mit1)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.1156,717,951 - 56,718,312RGD
RH 3.4 Map1683.1RGD
RH 3.4 Map1683.1UniSTS
RH 2.0 Map1413.3RGD
SHRSP x BN Map132.6799RGD
Peak: (D1Rat320)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21118,608,292 - 118,608,521 (+)MAPPER
Rnor_6.01125,875,758 - 125,875,986NCBI
Rnor_5.01126,980,427 - 126,980,655UniSTS
RGSC_v3.41119,536,684 - 119,536,913RGD
RGSC_v3.41119,536,685 - 119,536,913UniSTS
RGSC_v3.11119,615,027 - 119,615,256RGD
Celera1110,858,672 - 110,858,874UniSTS
FHH x ACI Map156.63RGD
FHH x ACI Map156.63UniSTS
Cytogenetic Map1q22UniSTS
Flank 2: (D1Mit3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21144,267,353 - 144,267,490 (-)MAPPER
mRatBN7.21144,267,353 - 144,267,916 (-)MAPPER
Rnor_6.01156,446,647 - 156,446,783NCBI
Rnor_6.01156,446,196 - 156,446,783NCBI
Rnor_5.01162,692,213 - 162,692,800UniSTS
Rnor_5.01162,692,664 - 162,692,800UniSTS
RGSC_v3.41146,971,846 - 146,971,983RGD
RGSC_v3.41146,971,847 - 146,971,983UniSTS
RGSC_v3.11147,050,253 - 147,050,389RGD
Celera1142,487,594 - 142,487,730UniSTS
RH 3.4 Map11128.0UniSTS
RH 3.4 Map11128.0RGD
RH 2.0 Map1740.1RGD
SHRSP x BN Map175.6399RGD
FHH x ACI Map167.73RGD
Cytogenetic Map1 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)143284731118944897Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)166023617118608521Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)177494165122494165Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)177857876122857876Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)177876254106047988Rat
61344Bp29Blood pressure QTL 297.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)178350581123350581Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)178430536123430536Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
4889494Scort2Serum corticosterone level QTL 24.2blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)180592172125592172Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)182174743118944897Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)number of 20 x 20 cm floor squares crossed into, out of or within a discrete space in an experimental apparatus (CMO:0001514)183547917128547917Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)185424647100358001Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)187580395150700247Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)190508614173018436Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)190532338123479925Rat
1300153Bp171Blood pressure QTL 1713.37arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)190664883143200202Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192184926137184926Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)192948896144267916Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)194494440117601394Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642722214537671Rat
61346Rf2Renal disease susceptibility QTL 23.7urine protein amount (VT:0005160)urine protein level (CMO:0000591)199267916144267916Rat
61399Tcat1Tongue tumor resistance QTL 13.3tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)199267916144267916Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
2317833Alcrsp19Alcohol response QTL 1912.40.001response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
1641897Alcrsp1Alcohol response QTL 1response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
2303591Gluco41Glucose level QTL 412blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1102168504147168504Rat
61370Mcs3Mammary carcinoma susceptibility QTL 32.15mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1102268556147268556Rat
1354623Rf46Renal function QTL 463.8blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)1102813953151162766Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1103111621148111621Rat
8694370Bw154Body weight QTL 1548.910.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)1103111621148111621Rat
631569Bp93Blood pressure QTL 930.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1106047847121834139Rat
631496Bp97Blood pressure QTL 973.08arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1106047847151047847Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
2313060Bss71Bone structure and strength QTL 712.60.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1118944747163944747Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
1598850Bp297Blood pressure QTL 2972.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121833674166833674Rat
2325726Eae30Experimental allergic encephalomyelitis QTL 30nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1123053310128593844Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
631570Bp94Blood pressure QTL 940.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123479780142990467Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501168883176Rat
9685799Bp375Blood pressure QTL 375arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
9685802Bp376Blood pressure QTL 376arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1126540680171540680Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
631202Gluco13Glucose level QTL 130.0001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1131763437159756369Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
631206Niddm40Non-insulin dependent diabetes mellitus QTL 40blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1136745990163747690Rat
71118Thym1Thymus enlargement QTL 110.170.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
724550Thym3Thymus enlargement QTL 37.820.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1136830018181830018Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383635Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
634315Niddm45Non-insulin dependent diabetes mellitus QTL 457.16blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1144267916172949660Rat
61379Bp44Blood pressure QTL 4419.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144267916174133260Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Tcas6


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Tcas6  Tongue tumor susceptibility QTL 6  Tts6    Symbol updated 1299863 APPROVED
2004-09-08 Tts6  Tongue tumor susceptibility QTL 6  Tscc2  Tongue squamous cell carcinoma QTL 2  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general DA allele associated with the increased number of the tongue carcinomas; also linked to the increased diameter of the largest tongue carcinoma (LOD = 6.79) 634723