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Gene: Bloc1s6 (biogenesis of lysosomal organelles complex 1 subunit 6) Rattus norvegicus
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Symbol: Bloc1s6
Name: biogenesis of lysosomal organelles complex 1 subunit 6
Description: Predicted to have actin filament binding activity and protein homodimerization activity. Predicted to be involved in several processes, including endosome to melanosome transport; establishment of vesicle localization; and secretion of lysosomal enzymes. Predicted to colocalize with SNARE complex. Human ortholog(s) of this gene implicated in Hermansky-Pudlak syndrome 9. Orthologous to human BLOC1S6 (biogenesis of lysosomal organelles complex 1 subunit 6); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: biogenesis of lysosomal organelles complex-1, subunit 6, pallidin; biogenesis of lysosome-related organelles complex 1 subunit 6; BLOC-1 subunit 6; LOC317630; MGC114534; pallid protein homolog; pallidin; pallidin homolog; pallidin homolog (mouse); Pldn
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03114,869,478 - 114,880,218 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3114,869,459 - 114,881,590 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03121,407,586 - 121,418,326 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43109,706,842 - 109,716,971 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13109,612,414 - 109,622,544 (+)NCBI
Celera3108,694,425 - 108,704,523 (+)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Bloc1s6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310208
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.