Gpr37l1 (G protein-coupled receptor 37-like 1) - Rat Genome Database

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Gene: Gpr37l1 (G protein-coupled receptor 37-like 1) Rattus norvegicus
Analyze
Symbol: Gpr37l1
Name: G protein-coupled receptor 37-like 1
RGD ID: 628835
Description: Predicted to enable G protein-coupled peptide receptor activity; peptide binding activity; and prosaposin receptor activity. Predicted to be involved in several processes, including adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway; negative regulation of hydrogen peroxide-induced cell death; and positive regulation of MAPK cascade. Predicted to act upstream of or within negative regulation of cell differentiation; negative regulation of smoothened signaling pathway; and positive regulation of cerebellar granule cell precursor proliferation. Predicted to be located in ciliary membrane. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Orthologous to human GPR37L1 (G protein-coupled receptor 37 like 1); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: endothelin B receptor-like protein 2; ETBR-LP-2; G-protein coupled receptor 37-like 1; G-protein coupled receptor CNS2; prosaposin receptor GPR37L1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21346,598,574 - 46,605,421 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1346,598,578 - 46,605,421 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1349,205,278 - 49,212,462 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01350,493,346 - 50,500,533 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01347,759,407 - 47,766,588 (-)NCBIRnor_WKY
Rnor_6.01351,985,698 - 51,992,547 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1351,985,684 - 51,992,693 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01357,037,408 - 57,044,257 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41348,121,001 - 48,127,850 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11348,135,043 - 48,141,951 (-)NCBI
Celera1346,923,830 - 46,930,679 (-)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Congenic mapping and sequence analysis of the Renin locus. Flister MJ, etal., Hypertension. 2013 Apr;61(4):850-6. doi: 10.1161/HYPERTENSIONAHA.111.01008. Epub 2013 Mar 4.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Molecular cloning and characterization of two putative G protein-coupled receptors which are highly expressed in the central nervous system. Leng N, etal., Brain Res Mol Brain Res 1999 May 21;69(1):73-83.
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:22871113   PMID:23382219   PMID:23690594   PMID:24062445   PMID:27072655   PMID:28688853   PMID:29625592   PMID:29656342   PMID:31215019   PMID:32357304   PMID:33259479  


Genomics

Comparative Map Data
Gpr37l1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21346,598,574 - 46,605,421 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1346,598,578 - 46,605,421 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1349,205,278 - 49,212,462 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01350,493,346 - 50,500,533 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01347,759,407 - 47,766,588 (-)NCBIRnor_WKY
Rnor_6.01351,985,698 - 51,992,547 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1351,985,684 - 51,992,693 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01357,037,408 - 57,044,257 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41348,121,001 - 48,127,850 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11348,135,043 - 48,141,951 (-)NCBI
Celera1346,923,830 - 46,930,679 (-)NCBICelera
Cytogenetic Map13q13NCBI
GPR37L1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381202,122,917 - 202,133,592 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1202,122,886 - 202,133,592 (+)EnsemblGRCh38hg38GRCh38
GRCh371202,092,045 - 202,102,720 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361200,358,652 - 200,365,257 (+)NCBINCBI36Build 36hg18NCBI36
Celera1175,215,891 - 175,222,492 (+)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1173,257,557 - 173,264,172 (+)NCBIHuRef
CHM1_11203,514,323 - 203,520,925 (+)NCBICHM1_1
T2T-CHM13v2.01201,380,483 - 201,391,163 (+)NCBIT2T-CHM13v2.0
Gpr37l1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391135,087,988 - 135,095,419 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1135,087,972 - 135,095,419 (-)EnsemblGRCm39 Ensembl
GRCm381135,160,250 - 135,167,681 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1135,160,234 - 135,167,681 (-)EnsemblGRCm38mm10GRCm38
MGSCv371137,056,827 - 137,064,258 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361136,976,661 - 136,983,835 (-)NCBIMGSCv36mm8
Celera1137,787,013 - 137,794,466 (-)NCBICelera
Cytogenetic Map1E4NCBI
Gpr37l1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540638,214,423 - 38,223,281 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540638,214,490 - 38,223,281 (+)NCBIChiLan1.0ChiLan1.0
GPR37L1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11182,022,600 - 182,028,623 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1182,022,600 - 182,028,623 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01177,720,832 - 177,731,551 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GPR37L1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.17882,672 - 887,679 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl7883,279 - 887,811 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha7934,690 - 939,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.07890,517 - 895,524 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl7888,710 - 895,660 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.17878,740 - 883,744 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.07986,968 - 991,972 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.071,010,981 - 1,015,985 (-)NCBIUU_Cfam_GSD_1.0
Gpr37l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934473,173,650 - 73,179,749 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365672,407,339 - 2,414,437 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049365672,408,326 - 2,414,411 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR37L1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1024,307,058 - 24,315,103 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11024,306,731 - 24,315,093 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21028,707,707 - 28,712,746 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPR37L1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12527,276,393 - 27,283,231 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2527,277,360 - 27,283,350 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605528,054,557 - 28,063,314 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr37l1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248078,605,488 - 8,611,669 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248078,605,488 - 8,611,760 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gpr37l1
29 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:138
Count of miRNA genes:101
Interacting mature miRNAs:125
Transcripts:ENSRNOT00000008282
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)13931346554313465Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)13931346554313465Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131491565559915655Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)131515872260158722Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131769443653050594Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132230187567301875Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132320344868203448Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132369296968692969Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132369296968692969Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133124133158363171Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
4145117Mcs27Mammary carcinoma susceptibility QTL 270.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)134343790447841255Rat
6893344Cm79Cardiac mass QTL 791.50.04heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)134372077062022792Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134504940490049404Rat
12879472Bp399Blood pressure QTL 399arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134522835847841255Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 35
Low 3 17 17 1 18 1 7 9 19 7 21 11 7
Below cutoff 26 36 36 1 36 1 2 20 28 20 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000008282   ⟹   ENSRNOP00000008282
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1346,598,578 - 46,605,421 (-)Ensembl
Rnor_6.0 Ensembl1351,985,684 - 51,992,693 (-)Ensembl
RefSeq Acc Id: NM_145784   ⟹   NP_665727
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21346,598,574 - 46,605,421 (-)NCBI
Rnor_6.01351,985,698 - 51,992,547 (-)NCBI
Rnor_5.01357,037,408 - 57,044,257 (-)NCBI
RGSC_v3.41348,121,001 - 48,127,850 (-)RGD
Celera1346,923,830 - 46,930,679 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_665727 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD54656 (Get FASTA)   NCBI Sequence Viewer  
  AAI68215 (Get FASTA)   NCBI Sequence Viewer  
  EDM09703 (Get FASTA)   NCBI Sequence Viewer  
  EDM09704 (Get FASTA)   NCBI Sequence Viewer  
  Q9QYC5 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_665727   ⟸   NM_145784
- Peptide Label: precursor
- UniProtKB: B4F7C1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000008282   ⟸   ENSRNOT00000008282
Protein Domains
G_PROTEIN_RECEP_F1_2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QYC5-F1-model_v2 AlphaFold Q9QYC5 1-481 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:628835 AgrOrtholog
BioCyc Gene G2FUF-18214 BioCyc
Ensembl Genes ENSRNOG00000006237 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000008282 ENTREZGENE
  ENSRNOP00000008282.3 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000008282 ENTREZGENE
  ENSRNOT00000008282.7 UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPR37_orph UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:252939 UniProtKB/TrEMBL
NCBI Gene 252939 ENTREZGENE
PANTHER PTHR46216 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gpr37l1 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPR37ORPHANR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B4F7C1 ENTREZGENE, UniProtKB/TrEMBL
  G37L1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-12-14 Gpr37l1  G protein-coupled receptor 37-like 1      Symbol and Name status set to approved 1299863 APPROVED
2003-02-27 Gpr37l1  G protein-coupled receptor 37-like 1      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression highly expressed in rat brain 632894