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Gene: Utp3 (UTP3, small subunit processome component) Rattus norvegicus
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Symbol: Utp3
Name: UTP3, small subunit processome component
Description: Predicted to be involved in brain development and maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to the nucleolus and small-subunit processome. Orthologous to human UTP3 (UTP3 small subunit processome component); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; clofibric acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: charged amino acid rich leucine zipper 1; charged amino acid-rich leucine zipper 1; Crlz1; disrupter of silencing SAS10; LOC305258; something about silencing protein 10; UTP3 homolog; UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae; UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae); UTP3, small subunit processome component homolog; UTP3, small subunit processome component homolog (S. cerevisiae)
Orthologs:
Homo sapiens (human) : UTP3 (UTP3 small subunit processome component)  HGNC  Alliance
Mus musculus (house mouse) : Utp3 (UTP3 small subunit processome component)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Utp3 (UTP3 small subunit processome component)
Pan paniscus (bonobo/pygmy chimpanzee) : UTP3 (UTP3 small subunit processome component)
Canis lupus familiaris (dog) : UTP3 (UTP3, small subunit processome component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Utp3 (UTP3 small subunit processome component)
Sus scrofa (pig) : UTP3 (UTP3 small subunit processome component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01421,153,998 - 21,155,652 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1421,154,000 - 21,155,652 (-)Ensembl
Rnor_5.01421,063,825 - 21,065,479 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41421,095,959 - 21,097,613 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11421,095,959 - 21,097,613 (-)NCBI
Celera1418,854,363 - 18,856,017 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Utp3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308540
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.