Zfp365 (zinc finger protein 365) - Rat Genome Database

Name: Zfp365
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Zfp365 (zinc finger protein 365) Rattus norvegicus

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Symbol:

Zfp365

Name:

zinc finger protein 365

RGD ID:

1565986

Description:

Predicted to enable metal ion binding activity. Involved in positive regulation of oligodendrocyte differentiation. Predicted to be located in centrosome and cytoplasm. Human ortholog(s) of this gene implicated in uric acid nephrolithiasis. Orthologous to human ZNF365 (zinc finger protein 365); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Znf365

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF365 (zinc finger protein 365)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB
Mus musculus (house mouse):	Zfp365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf365 (zinc finger protein 365)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ZNF365 (zinc finger protein 365)	HGNC	Ensembl, HomoloGene, NCBI, OrthoDB, Panther
Alliance orthologs ³
Mus musculus (house mouse):	Zfp365 (zinc finger protein 365)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ZNF365 (zinc finger protein 365)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf365 (zinc finger protein 365)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	znf365	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	20,665,122 - 20,688,607 (+)	NCBI		GRCr8
mRatBN7.2	20	20,666,240 - 20,689,734 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	20,666,240 - 20,691,238 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	21,395,013 - 21,418,499 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	20,747,627 - 20,771,114 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	21,222,748 - 21,246,240 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	22,060,160 - 22,083,766 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	22,060,224 - 22,086,108 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	24,159,323 - 24,183,062 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	21,490,528 - 21,514,845 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	20	22,029,753 - 22,053,277 (+)	NCBI		Celera
Cytogenetic Map	20	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

amphetamine (EXP)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP,ISO)

carbon nanotube (ISO)

chrysene (ISO)

cisplatin (ISO)

dibenz[a,h]anthracene (ISO)

endosulfan (EXP)

etoposide (ISO)

fipronil (EXP)

hydroxyurea (ISO)

mitomycin C (ISO)

Muraglitazar (EXP)

N-methyl-N-nitrosourea (ISO)

paracetamol (EXP)

Soman (EXP)

Tesaglitazar (EXP)

tetraphene (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cerebellar molecular layer morphogenesis (IEA,ISO,ISS)

dendrite arborization (IEA,ISO,ISS)

dendritic spine morphogenesis (IEA,ISO,ISS)

negative regulation of neuron projection development (IEA,ISS)

positive regulation of oligodendrocyte differentiation (IEA,IMP,ISO)

regulation of DNA strand resection involved in replication fork processing (IBA,IEA,ISS)

regulation of double-strand break repair via homologous recombination (IBA,IEA,ISS)

regulation of neuron projection development (IBA)

telomere maintenance (IBA,IEA,ISO,ISS)

Cellular Component

centrosome (IEA)

cytoplasm (IEA)

Molecular Function

metal ion binding (IEA)

protein binding (IPI)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	A novel DISC1-interacting partner DISC1-Binding Zinc-finger protein: implication in the modulation of DISC1-dependent neurite outgrowth.	Hattori T, etal., Mol Psychiatry. 2007 Apr;12(4):398-407. Epub 2007 Jan 23.
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	DBZ, a CNS-specific DISC1 binding protein, positively regulates oligodendrocyte differentiation.	Shimizu S, etal., Glia. 2014 May;62(5):709-24. doi: 10.1002/glia.22636. Epub 2014 Jan 30.
8.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15489334	PMID:16617106	PMID:23776040	PMID:23912123	PMID:23966166	PMID:25983680

Genomics

Comparative Map Data

Zfp365
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	20,665,122 - 20,688,607 (+)	NCBI		GRCr8
mRatBN7.2	20	20,666,240 - 20,689,734 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	20,666,240 - 20,691,238 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	21,395,013 - 21,418,499 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	20,747,627 - 20,771,114 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	21,222,748 - 21,246,240 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	22,060,160 - 22,083,766 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	22,060,224 - 22,086,108 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	24,159,323 - 24,183,062 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	21,490,528 - 21,514,845 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	20	22,029,753 - 22,053,277 (+)	NCBI		Celera
Cytogenetic Map	20	p11	NCBI

ZNF365
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	62,643,643 - 62,672,010 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	62,520,448 - 62,672,011 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	64,134,128 - 64,240,044 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	63,803,922 - 64,101,777 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	57,401,050 - 57,698,970 (+)	NCBI		Celera
Cytogenetic Map	10	q21.2	NCBI
HuRef	10	58,125,768 - 58,423,451 (+)	NCBI		HuRef
CHM1_1	10	64,416,070 - 64,713,897 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	63,501,484 - 63,529,831 (+)	NCBI		T2T-CHM13v2.0

Zfp365
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	67,721,935 - 67,748,492 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	67,721,933 - 67,748,492 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	67,886,105 - 67,912,662 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	67,886,103 - 67,912,662 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	67,348,853 - 67,375,410 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	67,281,462 - 67,308,019 (-)	NCBI		MGSCv36	mm8
MGSCv36	10	67,936,422 - 67,962,516 (-)	NCBI		MGSCv36	mm8
Celera	10	68,980,055 - 69,006,641 (-)	NCBI		Celera
Cytogenetic Map	10	B5.1	NCBI
cM Map	10	35.04	NCBI

Znf365
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955425	15,652,373 - 15,675,336 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955425	15,652,373 - 15,675,255 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZNF365
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	74,572,996 - 74,601,063 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	74,578,319 - 74,606,386 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	58,894,939 - 58,923,176 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	61,223,925 - 61,329,657 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	61,223,925 - 61,329,657 (+)	Ensembl	panpan1.1		panPan2

ZNF365
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	14,297,652 - 14,429,634 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	14,311,302 - 14,331,568 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	14,527,088 - 14,642,551 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	14,573,032 - 14,689,126 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	14,573,096 - 14,687,863 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	14,556,021 - 14,671,742 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	14,681,301 - 14,796,777 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	15,036,427 - 15,152,301 (+)	NCBI		UU_Cfam_GSD_1.0

Znf365
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	66,746,717 - 66,767,306 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936614	835,866 - 853,547 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936614	833,665 - 853,547 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF365
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	65,861,564 - 65,888,335 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	65,861,398 - 65,888,341 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	70,935,090 - 70,959,967 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF365
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	68,872,683 - 68,900,911 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	68,871,827 - 68,900,724 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	29,755,750 - 29,783,958 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf365
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624791	1,330,794 - 1,470,973 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624791	1,330,869 - 1,355,248 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Zfp365
163 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	366
Count of miRNA genes:	218
Interacting mature miRNAs:	272
Transcripts:	ENSRNOT00000057992
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4889610	Pancm3	Pancreatic morphology QTL 3	3.75	0.001	pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	20	17617832	47606836	Rat
1641915	Colcr9	Colorectal carcinoma resistance QTL 9	2.97	0.0024	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	20	1530655	46530655	Rat
2317057	Aia27	Adjuvant induced arthritis QTL 27	2.83		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	20	2892597	26381954	Rat
4889870	Pur30	Proteinuria QTL 30	19	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	20	8042410	29322208	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600972	Rat
2305926	Iddm37	Insulin dependent diabetes mellitus QTL 37	6		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	20	1527842	46527842	Rat
1354642	Despr15	Despair related QTL 15		0.0027	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	20	1	24159021	Rat
1600382	Edcs3	Endometrial carcinoma susceptibility QTL3	3.5	0.003	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	20	1	25159026	Rat
8694189	Bw153	Body weight QTL 153	3.13	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	20	1	29191651	Rat
2303626	Vencon10	Ventilatory control QTL 10		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	20	19190721	54435887	Rat
9590109	Sffal8	Serum free fatty acids level QTL 8	5.32	0.01	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	20	1	29191651	Rat
9590275	Scort15	Serum corticosterone level QTL 15	3.48	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	29191651	Rat
9589155	Insul32	Insulin level QTL 32	6.38	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	20	1	29191651	Rat
7411650	Foco23	Food consumption QTL 23	20.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	29191651	Rat
7411652	Foco24	Food consumption QTL 24		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	11757515	54435887	Rat
2317851	Alcrsp22	Alcohol response QTL 22	3.2	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
1598816	Memor12	Memory QTL 12	2.4		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	20	2606836	47606836	Rat
2317880	Alcrsp25	Alcohol response QTL 25	2.3		response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	17697550	54435887	Rat
1641893	Alcrsp7	Alcohol response QTL 7			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578807	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600972	Rat
9590092	Insglur9	Insulin/glucose ratio QTL 9	18.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	20	11757515	54435887	Rat

Markers in Region

D20Got116

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	20,678,571 - 20,678,700 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	22,072,670 - 22,072,796	NCBI	Rnor6.0
Rnor_5.0	20	24,171,833 - 24,171,959	UniSTS	Rnor5.0
RGSC_v3.4	20	21,502,443 - 21,502,569	UniSTS	RGSC3.4
Celera	20	22,042,035 - 22,042,161	UniSTS
Cytogenetic Map	20	p11	UniSTS

RH137818

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	20,689,514 - 20,689,685 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	22,083,547 - 22,083,717	NCBI	Rnor6.0
Rnor_5.0	20	24,182,843 - 24,183,013	UniSTS	Rnor5.0
RGSC_v3.4	20	21,514,626 - 21,514,796	UniSTS	RGSC3.4
Celera	20	22,053,058 - 22,053,228	UniSTS
Cytogenetic Map	20	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001025145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC087056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000057992 ⟹ ENSRNOP00000054802

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	20,666,322 - 20,691,238 (+)	Ensembl
Rnor_6.0 Ensembl	20	22,060,224 - 22,086,108 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119323 ⟹ ENSRNOP00000092825

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	20,666,240 - 20,688,379 (+)	Ensembl

RefSeq Acc Id:

NM_001025145 ⟹ NP_001020316

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	20,665,122 - 20,688,607 (+)	NCBI
mRatBN7.2	20	20,666,240 - 20,689,734 (+)	NCBI
Rnor_6.0	20	22,060,160 - 22,083,766 (+)	NCBI
Rnor_5.0	20	24,159,323 - 24,183,062 (+)	NCBI
RGSC_v3.4	20	21,490,528 - 21,514,845 (+)	RGD
Celera	20	22,029,753 - 22,053,277 (+)	RGD

Sequence:

show sequence

CCCAGGGGTGGCTGCCCGGGGCCGGAGCACCAGCCTCGCGTCCCCGGGCGCCGCCCCCGTGTCC
CGCCCGCGCCACGCTCCGCCCCGGTCGCCGCTCGTCCCGCGTGGGAGCCGACCTGGCTCAGCCT
GATTTACGGCTCTGCTGAAAACCGCTCGCGCGGCTCCCGCAGCATCAGCACCGGCGGCTGCAGC
GGCAGCAACAAGTCGGGACGTTCAGAGTGATGCAACAGACGACTTTTGAGGAAAGCCGGTACCG
TTGGCAGGACTCCCTGGAGAATGTCGCTGTGTGCCTGCCCTTCCGCTGCCCGAGATGTGGAGAC
CATACGAGATTTAGAAGCTTGTCGTCCTTGAGGGCTCATCTAGAGTTCAGTCACAGCTACGAGG
AACGAACCCTCCTGACAAAATGCAGCCTCCTGCCCTCTCTCAAGGACACAGACCTACTCAGGTC
CTCGGAGCTCCCCAAGCAGGGAAAACTGCTCCGGGGCCACGCAAAGGTGACCAAGCAGAAGCCT
AGCTATGTTAACTTGTATAGCATCTCCCATGGGCACTCCAAGGACCCGAAACCCTTTGAGATGG
TGGCAGAGAGGCCCGTGTCCTACGTGCAGACCTACACAGCCGTGGACATCCGGGCTGACTCTCT
GGATGCTCCCCGGTCCAGCTCTGGACTCCCCACCCAAGACACCAAAGCTGCTTTCGAGGCTCAC
GTCCGAGAAAAGTTCAATCGCATGGTAGAGGCCGTGGACAGGACCATCGAGAAGAGAATCGACA
AACTCACCAAAGAGTTGGCCCAGAAAACCGCCGAACTGTTGGAAGTCCGGGCAGCCTTTGTGCA
GCTGACTCAGAAGAAGCAGGAAGTCCAGAGGCGAGAACGCGCCCTGCACAAACAGGTCGACGTG
GCTGTGGAAATGATCGCCGTGCTGAAGCAGCGCTTGACGGAGTCCGAGGAGGAGCTCCTGAGGA
AAGAGGAAGAAGTTGTCACATTCAACCATTTCCTGGAAGCGGCGGCCGAGAAGGAGGTTCAAGG
AAAAGCAAGGCTCCAGGACTTTATTGAGAACCTGCTGCAAAGGGTAGAGCTGGCGGAGAAGCAG
TTGGAGTACTATCAAAGCCAGCAGGCCTCCGGTTTCAGCCATGACACTAGCGAGCACATGCTCA
CAGACATCTCATCGAGCAGGAAGTCCCGATGCCTAAGCCGAGGGCACCAGCATTCTGTTTGCAA
CCATCCTGAGCTGAAGGCACACTTCCATTTGAAGGGGAGAAGCTACCTGAAGAAAGCCAAGGAT
GAGCGAGCCGGCATGCAGCCCGCCAAGGCCATTCACGAACAGGCTGAGTCTCCGAGAGAATTCT
TCAGACCAGCCAAGAAAGGGGAGCACCTGGGCCTGAGCCGGAAGGGCAACTTCAGGCCCAAAAT
GGCTAAAAAGAAGCCTACGGCGATCGTGAATATCATCTAGAGCTTGGGTGGCTCAGAAGCATCA
CCACGGGGCTTACCGAATGGTGTTCCAGGGGCCAACGGTGTTGTCCTTTTGGATCTGTGGCGGA
AGGAAGGCATAAAGGAAACGCAGGGAACACAGCATACAGGGTCACTCAGATTAACCAGAATTTA
ACACAGCGGGTCTCAGTAAGCCAAGACTTTATTTTGGCCTCCTTTAGGTGCGAGCAAGGGAAAT
TATAAAAATTAAATAACGAAGTAAAACTTGAAGCACTCGAATCCTATAGTTCTGGTAAACACGA
ATGTGCAATTTCTTAAATAATTGGCCCAGTCTTCCACAGACCTGGCTCCAGGGGTTCCTCTACC
CGGTGCCCATTAGTACGTGGGCTGCACAAGATGCCAGACTCCGGTGTCTACCGCTCTCTGAATT
ATGAGGCAAGGAATGTGACTGTGAAGTTCTTCTGCTTTAAAGAAAAATACTACTTTTGGTCTTC
TGACAGGGCCGTGCTATGCTATGTAGCCCTGGCTGGCTTGGAGCTTGATATATATATATACCAG
GCTAGCTTTGAACTTGCAGCAATCCTCCTGCCTCTGCCTCCTGAGCTCTGGGAGTACAGGTGTG
CACCACCGCACCCAGCTAGGAGTGTAAAGTTCTTGTTGAGAGCAGTGAAATCAAAGGCTTTTGT
CGTTTGCTTCTGTGTAGATCTCCTTTAATACATTTGAAAGTCTCTATGGTAAAGGTTCGTCTGT
TACCCTTGAGTATTCTGGTTAATCAAGACTTCAGTCTCCGGGTGGGTTACAGAGTACGTTCAGT
TAGACCTCGGTTCTCACTTTGCCAGGTGGCTTTCGGAGTTGATTCACATCTGGGTCTATCAGAG
CATATTTATCCAGGACTGGGTGCACCCCTCCTGCCTTCTTCGGCTAAGCACGCTGCACCCTCAA
GAGCTGTCTGTCTACCAGCCTCTCTAGAGATAGCTGCTAAAACCCTTGCGGTCAGTAGCAGCAC
TGATGTGGTGCCCAAGTGCTTGATGTGCTAGAGGGCACATTCAGTGTCCCATGGCCATCCGGGC
CATGCGGTGGGGACGCCCGACGTACTACCACCGCCTGCGTCTCTGGAAGTTCCACCGGCTTGCT
ACCGGTTACCTGTGAGCATGCTCTTTGCTAACTTCCGTTTCCACCCGGAAGCTCACTTTGCCTC
CTGCTGCTTCTATGGCTGGTGTACACTTTCCTCCCTCTCAGCCACACACCTGGGGGTGTTCATT
GTGCGGTGCATTCTGCTGTAATTTCAGATGAAAAAGAATGCATGTGGGATATGACCCGTGACAT
TATCCTCCCCAAATGGCATTGTTCCCATTAAAAAAAAAAAGCTTTCAAGAAAAAAAAAAAAAAA
AAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001020316	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH87056	(Get FASTA)	NCBI Sequence Viewer
	EDL97318	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000054802.4
	ENSRNOP00000092825.1
GenBank Protein	Q5PQS2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001020316 ⟸ NM_001025145

- UniProtKB:

Q5PQS2 (UniProtKB/Swiss-Prot), A6JKV2 (UniProtKB/TrEMBL), A0A8L2QRR1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQQTTFEESRYRWQDSLENVAVCLPFRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSL
LPSLKDTDLLRSSELPKQGKLLRGHAKVTKQKPSYVNLYSISHGHSKDPKPFEMVAERPVSYVQ
TYTAVDIRADSLDAPRSSSGLPTQDTKAAFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKT
AELLEVRAAFVQLTQKKQEVQRRERALHKQVDVAVEMIAVLKQRLTESEEELLRKEEEVVTFNH
FLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFSHDTSEHMLTDISSSRKSR
CLSRGHQHSVCNHPELKAHFHLKGRSYLKKAKDERAGMQPAKAIHEQAESPREFFRPAKKGEHL
GLSRKGNFRPKMAKKKPTAIVNII

hide sequence

Ensembl Acc Id:

ENSRNOP00000054802 ⟸ ENSRNOT00000057992

Ensembl Acc Id:

ENSRNOP00000092825 ⟸ ENSRNOT00000119323

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5PQS2-F1-model_v2	AlphaFold	Q5PQS2	1-408	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701561

Promoter ID:

EPDNEW_R12084

Type:

initiation region

Name:

Zfp365_1

Description:

zinc finger protein 365

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	20	22,060,227 - 22,060,287	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565986	AgrOrtholog
BioCyc Gene	G2FUF-3888	BioCyc
Ensembl Genes	ENSRNOG00000000638	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000057992.5	UniProtKB/TrEMBL
	ENSRNOT00000119323.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7124000	IMAGE-MGC_LOAD
InterPro	GenomicStab_NeuMorph_Reg	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:499425	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:94069	IMAGE-MGC_LOAD
NCBI Gene	499425	ENTREZGENE
PANTHER	PROTEIN ZNF365	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Zfp365	PhenoGen
RatGTEx	ENSRNOG00000000638	RatGTEx
UniProt	A0A8I6AGA7_RAT	UniProtKB/TrEMBL
	A0A8L2QRR1	ENTREZGENE, UniProtKB/TrEMBL
	A6JKV2	ENTREZGENE, UniProtKB/TrEMBL
	Q5PQS2	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-02-09	Zfp365	zinc finger protein 365			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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