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Gene: Vps51 (VPS51 subunit of GARP complex) Rattus norvegicus
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Symbol: Vps51
Name: VPS51 subunit of GARP complex
Description: INVOLVED IN autophagy (ortholog); endocytic recycling (ortholog); lysosomal transport (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); malignant glioma (ortholog); Pontocerebellar Hypoplasia Type 13 (ortholog); FOUND IN recycling endosome; trans-Golgi network; EARP complex (ortholog); INTERACTS WITH Brodifacoum; aflatoxin B1 (ortholog); carbon nanotube (ortholog)
Type: protein-coding
Also known as: chromosome 11 open reading frame 2-like; LOC100361915; vacuolar protein sorting 51 (S. cerevisiae); vacuolar protein sorting 51 homolog; vacuolar protein sorting 51 homolog (S. cerevisiae); VPS51 GARP complex subunit
Orthologs:
Homo sapiens (human) : VPS51 (VPS51 subunit of GARP complex)  HGNC  Alliance
Mus musculus (house mouse) : Vps51 (VPS51 GARP complex subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps51 (VPS51 subunit of GARP complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS51 (VPS51 subunit of GARP complex)
Canis lupus familiaris (dog) : VPS51 (VPS51 subunit of GARP complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps51 (VPS51 subunit of GARP complex)
Sus scrofa (pig) : VPS51 (VPS51 subunit of GARP complex)
Chlorocebus sabaeus (African green monkey) : VPS51 (VPS51 subunit of GARP complex)
Heterocephalus glaber (naked mole-rat) : Vps51 (VPS51 subunit of GARP complex)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl1221,430,648 - 221,440,467 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,365,957 - 228,376,416 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,705,273 - 208,712,115 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1200,894,134 - 200,904,582 (-)NCBICelera
Cytogenetic Map1 NCBI


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Transcriptome

Additional Information

External Database Links
Nomenclature History
 
More on Vps51
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2319165
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.