Hhex (hematopoietically expressed homeobox)

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Gene: Hhex (hematopoietically expressed homeobox) Rattus norvegicus

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Symbol:

Hhex

Name:

hematopoietically expressed homeobox

RGD ID:

619932

Description:

Enables sequence-specific DNA binding activity. Involved in several processes, including negative regulation of angiogenesis; negative regulation of transcription by RNA polymerase II; and negative regulation of vascular endothelial growth factor receptor signaling pathway. Predicted to be located in cytoplasm and nucleus. Predicted to be part of protein-DNA complex. Orthologous to human HHEX (hematopoietically expressed homeobox); PARTICIPATES IN maturity-onset diabetes of the young pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hematopoietically-expressed homeobox protein HHEX; Hex

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HHEX (hematopoietically expressed homeobox)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Hhex (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Hhex (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HHEX (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	HHEX (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hhex (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HHEX (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	HHEX (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hhex (hematopoietically expressed homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	LBX1 (ladybird homeobox 1)	HGNC	PhylomeDB
Alliance orthologs ³
Mus musculus (house mouse):	Hhex (hematopoietically expressed homeobox)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	HHEX (hematopoietically expressed homeobox)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	hhex (hematopoietically expressed homeobox)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	HHEX	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	pha-2	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	hhex	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	244,602,945 - 244,608,532 (+)	NCBI		GRCr8
mRatBN7.2	1	235,190,455 - 235,196,042 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	235,190,455 - 235,196,042 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	243,576,013 - 243,581,585 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	250,507,808 - 250,513,395 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	243,345,997 - 243,351,584 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	256,101,994 - 256,107,581 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	256,101,903 - 256,107,649 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	263,583,988 - 263,589,575 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	241,736,542 - 241,742,129 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	241,926,133 - 241,931,721 (+)	NCBI
Celera	1	232,281,249 - 232,286,836 (+)	NCBI		Celera
Cytogenetic Map	1	q53	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Neoplasms (ISO)

polycystic liver disease (ISO)

polycystic liver disease 1 (ISO)

steatotic liver disease (ISO)

type 2 diabetes mellitus (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2-palmitoylglycerol (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

5-azacytidine (ISO)

acetaldehyde (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

azathioprine (ISO)

belinostat (ISO)

benzene (EXP)

benzo[a]pyrene (ISO)

Benzo[ghi]perylene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

buspirone (EXP)

buta-1,3-diene (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

CGP 52608 (ISO)

chenodeoxycholic acid (ISO)

chlorpyrifos (ISO)

choline (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

diazinon (ISO)

diclofenac (ISO)

dimethylarsinic acid (ISO)

dorsomorphin (ISO)

entinostat (ISO)

epoxiconazole (ISO)

ethyl methanesulfonate (ISO)

fipronil (EXP)

flusilazole (ISO)

folic acid (ISO)

furan (EXP)

GW 4064 (ISO)

inositol (ISO)

L-methionine (ISO)

leflunomide (ISO)

lipopolysaccharide (ISO)

lithium atom (ISO)

lithium hydride (ISO)

metformin (EXP)

methotrexate (ISO)

methylarsonic acid (ISO)

methylmercury(1+) (EXP)

mitomycin C (ISO)

nefazodone (EXP)

nickel atom (ISO)

nimesulide (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorobutanesulfonic acid (EXP)

perfluorobutyric acid (EXP)

perfluorododecanoic acid (EXP)

perfluorohexanesulfonic acid (EXP)

perfluorohexanoic acid (EXP)

perfluorononanoic acid (EXP)

perfluorooctane-1-sulfonic acid (EXP,ISO)

perfluorooctanoic acid (EXP)

perfluoroundecanoic acid (EXP)

phenformin (EXP)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

quercetin (EXP,ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sevoflurane (EXP)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulforaphane (ISO)

testosterone (ISO)

tetracycline (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ morphogenesis (ISO)

anterior/posterior pattern specification (ISO)

B cell differentiation (ISO)

cell differentiation (IBA,IDA)

common bile duct development (ISO)

DNA conformation change (ISO)

embryonic heart tube development (ISO)

embryonic organ development (ISO)

endoderm development (ISO)

forebrain development (ISO)

forebrain morphogenesis (ISO)

gallbladder development (ISO)

hemopoiesis (ISO,TAS)

hepatic duct development (ISO)

hepatoblast differentiation (ISO)

hepatocyte differentiation (ISO)

in utero embryonic development (ISO)

interkinetic nuclear migration (ISO)

liver development (ISO)

morphogenesis of an epithelium (ISO)

mRNA export from nucleus (ISO)

multicellular organism growth (ISO)

myeloid leukocyte differentiation (ISO)

negative regulation of angiogenesis (IDA,ISO)

negative regulation of cyclin-dependent protein serine/threonine kinase activity (ISO)

negative regulation of DNA-templated transcription (IDA,ISO)

negative regulation of transcription by RNA polymerase II (IDA,ISO)

negative regulation of vascular endothelial growth factor receptor signaling pathway (IDA,ISO)

Notch signaling pathway (ISO)

pancreas development (ISO)

poly(A)+ mRNA export from nucleus (ISO)

positive regulation of canonical Wnt signaling pathway (ISO)

positive regulation of DNA-templated transcription (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

positive regulation of Wnt signaling pathway (ISO)

primary lung bud formation (ISO)

primitive streak formation (ISO)

protein localization to nucleus (ISO)

regulation of cell population proliferation (ISO)

regulation of leukocyte proliferation (ISO)

regulation of transcription by RNA polymerase II (IBA,ISO)

response to peptide hormone (IEP)

signal transduction (ISO)

thyroid gland development (ISO)

tissue morphogenesis (ISO)

vasculogenesis (ISO)

Cellular Component

cytoplasm (ISO)

nucleus (ISO)

protein-DNA complex (ISO)

Molecular Function

chromatin binding (ISO)

DNA binding, bending (ISO)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (ISO)

DNA-binding transcription factor binding (ISO)

DNA-binding transcription repressor activity, RNA polymerase II-specific (ISO)

eukaryotic initiation factor 4E binding (ISO)

HMG box domain binding (ISO)

protein binding (ISO)

protein homodimerization activity (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (ISO)

sequence-specific DNA binding (IDA,ISO)

transcription cis-regulatory region binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

maturity-onset diabetes of the young pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Getting your head around Hex and Hesx1: forebrain formation in mouse.	Martinez-Barbera JP and Beddington RS, Int J Dev Biol 2001;45(1):327-36.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Interaction between hex and GATA transcription factors in vascular endothelial cells inhibits flk-1/KDR-mediated vascular endothelial growth factor signaling.	Minami T, etal., J Biol Chem. 2004 May 14;279(20):20626-35. Epub 2004 Mar 10.
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	Expression and function of the homeodomain-containing protein Hex in thyroid cells.	Pellizzari L, etal., Nucleic Acids Res. 2000 Jul 1;28(13):2503-11.
7.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
8.	GOA pipeline	RGD automated data pipeline
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Homeobox protein Hex induces SMemb/nonmuscle myosin heavy chain-B gene expression through the cAMP-responsive element.	Sekiguchi K, etal., Circ Res. 2001 Jan 19;88(1):52-8.
11.	cDNA cloning and expression of rat homeobox gene, Hex, and functional characterization of the protein.	Tanaka T, etal., Biochem J 1999 Apr 1;339 ( Pt 1):111-7.

Additional References at PubMed

PMID:10804173	PMID:10804184	PMID:11027604	PMID:11044484	PMID:12477932	PMID:12522149	PMID:12554669	PMID:12588764	PMID:12655000	PMID:12791650	PMID:12826010	PMID:14736744
PMID:15187083	PMID:15459110	PMID:15581879	PMID:15728128	PMID:16364283	PMID:16540119	PMID:16582099	PMID:16764824	PMID:16854221	PMID:16936074	PMID:17580084	PMID:18713067
PMID:18755198	PMID:21445260	PMID:25446530	PMID:26306672	PMID:28927755

Genomics

Comparative Map Data

Hhex
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	244,602,945 - 244,608,532 (+)	NCBI		GRCr8
mRatBN7.2	1	235,190,455 - 235,196,042 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	235,190,455 - 235,196,042 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	243,576,013 - 243,581,585 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	250,507,808 - 250,513,395 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	243,345,997 - 243,351,584 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	256,101,994 - 256,107,581 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	256,101,903 - 256,107,649 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	263,583,988 - 263,589,575 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	241,736,542 - 241,742,129 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	241,926,133 - 241,931,721 (+)	NCBI
Celera	1	232,281,249 - 232,286,836 (+)	NCBI		Celera
Cytogenetic Map	1	q53	NCBI

HHEX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	92,689,955 - 92,695,647 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	92,689,955 - 92,695,647 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	94,449,712 - 94,455,404 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	94,439,661 - 94,445,388 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	94,439,691 - 94,445,383	NCBI
Celera	10	88,191,085 - 88,196,812 (+)	NCBI		Celera
Cytogenetic Map	10	q23.33	NCBI
HuRef	10	88,076,253 - 88,081,980 (+)	NCBI		HuRef
CHM1_1	10	94,732,137 - 94,737,863 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	93,569,602 - 93,575,294 (+)	NCBI		T2T-CHM13v2.0

Hhex
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	37,423,289 - 37,429,179 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	37,423,258 - 37,429,179 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	37,434,841 - 37,440,731 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	37,434,810 - 37,440,731 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	37,509,331 - 37,515,221 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	37,499,985 - 37,505,875 (+)	NCBI		MGSCv36	mm8
Celera	19	38,221,629 - 38,227,525 (+)	NCBI		Celera
Cytogenetic Map	19	C2	NCBI
cM Map	19	32.28	NCBI

Hhex
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955425	735,378 - 742,775 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955425	737,506 - 742,775 (-)	NCBI	ChiLan1.0	ChiLan1.0

HHEX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	104,725,043 - 104,730,830 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	104,730,394 - 104,736,144 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	89,433,402 - 89,439,137 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	92,947,373 - 92,952,992 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	92,947,373 - 92,952,992 (+)	Ensembl	panpan1.1		panPan2

HHEX
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	7,057,379 - 7,063,326 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	7,057,283 - 7,063,330 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	7,233,996 - 7,239,896 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	7,317,251 - 7,323,151 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	7,317,203 - 7,323,145 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	7,037,744 - 7,043,641 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	7,072,416 - 7,078,310 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	7,236,847 - 7,242,744 (+)	NCBI		UU_Cfam_GSD_1.0

Hhex
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	40,504,266 - 40,511,263 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936601	2,136,873 - 2,143,857 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936601	2,137,490 - 2,143,797 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HHEX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	104,194,343 - 104,200,219 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	104,194,424 - 104,199,684 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	113,794,343 - 113,799,603 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HHEX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	85,957,684 - 85,963,414 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	85,957,779 - 85,963,404 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	46,697,779 - 46,703,530 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hhex
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	3,897,871 - 3,904,083 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	3,897,907 - 3,903,828 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Hhex
26 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	273
Count of miRNA genes:	186
Interacting mature miRNAs:	207
Transcripts:	ENSRNOT00000022384
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	150700247	252085048	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	151162512	256448636	Rat
1357335	Bw39	Body weight QTL 39	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	1	197814409	242814409	Rat
2302375	Bw83	Body weight QTL 83	4.87	0.0002	body mass (VT:0001259)	body weight (CMO:0000012)	1	197697768	242697768	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	177227632	256448636	Rat
2293674	Bss39	Bone structure and strength QTL 39	7.1	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	1	201554356	246554356	Rat
2302378	Insul11	Insulin level QTL 11	3.25		blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	144267353	251128347	Rat
61455	Niddm7	Non-insulin dependent diabetes mellitus QTL 7	5.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	214537555	238757011	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	216255568	260522016	Rat
1600392	Bw123	Body weight QTL 123		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	223201027	260522016	Rat
7794788	Mcs32	Mammary carcinoma susceptibility QTL 32	2.61		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	1	115540693	238914717	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	179567751	260522016	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	195804352	257091168	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	177227632	256448636	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	195804352	257091168	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	206081677	251081677	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	153136852	260522016	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	195804352	257091168	Rat
2293694	Bss38	Bone structure and strength QTL 38	7.05	0.0001	femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	1	201554356	246554356	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	150700247	252085048	Rat
1300108	Rf8	Renal function QTL 8	3.75		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	1	228581588	259647894	Rat
8655655	Arrd2	Age-related retinal degeneration QTL 2	7.79		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	183970203	243914901	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	224054293	260122809	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	191019702	246062233	Rat
631215	Stl8	Serum triglyceride level QTL 8	9.27	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	1	225126575	260522016	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	224054293	260122809	Rat
2300175	Bmd40	Bone mineral density QTL 40	15.4	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	1	201554356	246554356	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	221264111	259647894	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	151162512	256448636	Rat
724538	Kidm1	Kidney mass QTL 1	3.2		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	213707201	252085212	Rat
2293655	Bss36	Bone structure and strength QTL 36	10.66	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	201554356	246554356	Rat
1298084	Thym4	Thymus enlargement QTL 4	10.68		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	1	197814409	242814409	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	150700142	252085212	Rat
8552891	Epfw5	Epididymal fat weight QTL 5	4.4		epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	1	193113876	238113876	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	224569538	260122809	Rat
734768	Niddm59	Non-insulin dependent diabetes mellitus QTL 59			body mass (VT:0001259)	body weight (CMO:0000012)	1	213843987	258843987	Rat
1358890	Bp259	Blood pressure QTL 259	3.06		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	210702053	260522016	Rat
724533	Rf51	Renal function QTL 51	5.3	0.0002	kidney plasma flow trait (VT:0005524)	renal plasma flow (CMO:0001914)	1	218753816	256448513	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	156677124	256448636	Rat
1358292	Cm37	Cardiac mass QTL 37	6.2	8e-07	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	1	196248093	241248093	Rat
61376	Bp42	Blood pressure QTL 42	23.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	197814409	242814409	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	199050459	259647894	Rat
1549910	Bw54	Body weight QTL 54		0.05	body mass (VT:0001259)	body weight (CMO:0000012)	1	214647894	259647894	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	214647894	259647894	Rat
1357399	Bw45	Body weight QTL 45	3.05		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	1	206329708	251329708	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	222363780	260522016	Rat
2316896	Gluco57	Glucose level QTL 57	7.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	228985440	245907899	Rat
1357404	Bw42	Body weight QTL 42	4.49	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	206329708	251329708	Rat
10053715	Scort24	Serum corticosterone level QTL 24	2.13	0.0088	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	221414816	260522016	Rat
7421630	Bp362	Blood pressure QTL 362		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	118608292	241799120	Rat
1358916	Kidm22	Kidney mass QTL 22	3.32		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	210702053	240947965	Rat
634321	Hc1	Hypercalciuria QTL 1	2.91		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	178810256	240830002	Rat
61400	Niddm1	Non-insulin dependent diabetes mellitus QTL 1	11		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	218753689	245907899	Rat
10059587	Bw173	Body weight QTL 173	3.23	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	1	202069611	247069611	Rat
2292216	Bw80	Body weight QTL 80	3.23	0.0019	body mass (VT:0001259)	body weight (CMO:0000012)	1	213533809	243914901	Rat
2292220	Bp306	Blood pressure QTL 306	3.47	0.00087	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	164310393	243914901	Rat
10059590	Kidm44	Kidney mass QTL 44	3.42	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	191033875	236033875	Rat
1641926	Teswt2	Testicular weight QTL 2	2.82		testis mass (VT:1000644)	both testes wet weight (CMO:0000175)	1	197697768	238755659	Rat
631658	Cm7	Cardiac mass QTL 7	5.32	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	1	196248093	241248093	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	151162512	256448636	Rat
2293700	Bmd27	Bone mineral density QTL 27	6.6	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	224054293	243747962	Rat
2293701	Bmd34	Bone mineral density QTL 34	8.3	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	1	224054293	243747962	Rat
8655855	Arrd3	Age-related retinal degeneration QTL 3	3.07		lens clarity trait (VT:0001304)	cataract incidence/prevalence measurement (CMO:0001585)	1	183970203	243914901	Rat
1600374	Mcs17	Mammary carcinoma susceptibility QTL 17	3		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	197670404	242670404	Rat
1581544	Rf52	Renal function QTL 52		0.05	urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	1	232156370	259647894	Rat
1600363	Hc6	Hypercalciuria QTL 6	2.7		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	203995416	244113296	Rat
631536	Lnnr2	Liver neoplastic nodule remodeling QTL 2	2.9	0.0005	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	1	233948574	260522016	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	176426412	257976495	Rat
1358191	Ept10	Estrogen-induced pituitary tumorigenesis QTL 10	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	192825253	243914732	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	216255568	260522016	Rat
631669	Iddm9	Insulin dependent diabetes mellitus QTL 9	2.8	0.039	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	233190394	258625266	Rat
7394701	Uae46	Urinary albumin excretion QTL 46	3.6	0.0056	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	201554356	246554356	Rat
1598821	Rf55	Renal function QTL 55	6.3		renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	218748008	257976495	Rat

Markers in Region

AA957911

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	235,195,228 - 235,195,412 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	256,106,768 - 256,106,951	NCBI	Rnor6.0
Rnor_5.0	1	263,588,762 - 263,588,945	UniSTS	Rnor5.0
RGSC_v3.4	1	241,741,316 - 241,741,499	UniSTS	RGSC3.4
Celera	1	232,286,023 - 232,286,206	UniSTS
Cytogenetic Map	1	q53	UniSTS

D6S1641

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	235,195,627 - 235,196,465 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	256,107,167 - 256,108,004	NCBI	Rnor6.0
Rnor_5.0	1	263,589,161 - 263,589,998	UniSTS	Rnor5.0
RGSC_v3.4	1	241,741,715 - 241,742,552	UniSTS	RGSC3.4
Celera	1	232,286,422 - 232,287,259	UniSTS
Cytogenetic Map	1	q53	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_024385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC103485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC088135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D86383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000022384 ⟹ ENSRNOP00000022384

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	235,190,455 - 235,196,042 (+)	Ensembl
Rnor_6.0 Ensembl	1	256,101,903 - 256,107,649 (+)	Ensembl

RefSeq Acc Id:

NM_024385 ⟹ NP_077361

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	244,602,945 - 244,608,532 (+)	NCBI
mRatBN7.2	1	235,190,455 - 235,196,042 (+)	NCBI
Rnor_6.0	1	256,101,994 - 256,107,581 (+)	NCBI
Rnor_5.0	1	263,583,988 - 263,589,575 (+)	NCBI
RGSC_v3.4	1	241,736,542 - 241,742,129 (+)	RGD
Celera	1	232,281,249 - 232,286,836 (+)	RGD

Sequence:

show sequence

GCGGAGCAGCCATGCAGTTCCCGCACCCGGGGCCCGCGGCTGCGCCCGCCGTCGGAGTCCCGCT
GTACGCGCCCACGCCGCTGCTGCAGCCCGCTCACCCGACGCCTTTCTACATCGACGACATCCTG
GGTCGCGGGCCCGCCGCTCCCACGCCCACTCCCACGCTGCCGTCCCCCAACTCCTCCTTCACCA
GCCTCGTGTCCTCCTACCGGACCCCGGTGTACGAGCCCACGCCGGTCCACCCCGCCTTCTCGCA
TCACCCCGCCGCCGCGCTGGCCGCTGCCTATGGCCCCGGTGGCTTCGGAGGCCCTCTGTACCCG
TTCCCGCGGACGGTGAACGACTACACGCACGCCCTACTCCGCCACGACCCCCTGGGCAAGCCCT
TGCTCTGGAACCCCTTCCTACAGCGACCTCTGCACAAAAGGAAAGGCGGTCAAGTGAGGTTTTC
CAACGACCAGACCATCGAGCTGGAGAAGAAGTTCGAGACTCAGAAATACCTCTCCCCACCTGAG
AGAAAGCGTCTGGCCAAGATGTTGCAGCTCAGCGAGAGACAGGTCAAAACCTGGTTTCAGAATC
GCAGAGCTAAATGGAGACGACTGAAGCAGGAGAATCCTCAAAGCAATAAAAAGGATGAGTTGGA
CAGTTTGGACACTTCCTGTGACCAGGGCCAAGACTTGCCCAGTGAACAGAATAAAGGTGCCTCT
TTGGACAGTTCTCAGTGTTCACCCTCCCCAGCCTCTCCGGAAGACCCTGAATCAGAGATCTCAG
AGGATTCCGACCAGGAAGTGGACATCGAGGGTGATAAAGGCTATTTTAATGCTGGATGACAGTC
ATCGGCCGTGACCATGTTCAGAGACTGGACTTTAGAATACCGTTCTGCTACAGACAAACTGGGA
AATTCTGAGAGAAAGAAGTACCATTCTTCTAGCGTTTTGAAAATATTTGGCACGGCGTGCATTG
AAACCATACTTTTGGTTTAGCGTACGTTTTCCGTACCGGTGTTAAGTTGTTTTGATAAAGTGGC
TAAATGTGACTTCGTTTTTAAAAAGTGAATTCTTTCTATTTGTGAGAAGTAATTTGAACTTTTG
CCTGAAGCTTAAACTATAACTTTAAAGGTTTTGGGCGGCTGTTCTCGAATGACTTTTCCCAAAT
GTGTAGCTGTTCCCTCGACTTCAGAGGTGCACTTAGAAAGGGGGCCAGCATTTGGGGATCCATG
GAATGCTTTCAAAGAGCACACTTGGTTTTTACGTGACACCTTACATTGCTGCCTTAACTCCAAA
GCCGGTTCAGAGCACTTGGCCCCTGGTGTCTGTTCTCATAAGCAAGATAGTTGATAAGATTCTT
ACAATCTTGTTTTGCTCGGCCAGTGCCTCTGACCCTGGTATTAAGGGATGACGCAGTCTCTACA
GGCAGGGAAACTGACTCACTTGTGACTGATCTCACATGAACTAGAAATAGCAGGACAATTAAAT
GTAAGTAGATTGTAGATAGTGTGTTTTATAGAAACCGTGTCTATAGCATGTGTATAGAATTATT
CGTTGTAAAAAAAACCCTCCCCAAATGTTTGATTTTTTTTTTTAATTTAATGAATTAACTTTCA
TAT

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Protein Sequences


Protein RefSeqs	NP_077361	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH88135	(Get FASTA)	NCBI Sequence Viewer
	BAA78692	(Get FASTA)	NCBI Sequence Viewer
	EDM13199	(Get FASTA)	NCBI Sequence Viewer
	EDM13200	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000022384.6

RefSeq Acc Id:

NP_077361 ⟸ NM_024385

- UniProtKB:

Q9WV22 (UniProtKB/TrEMBL), F7F7Q9 (UniProtKB/TrEMBL), A0A9K3Y8F2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQFPHPGPAAAPAVGVPLYAPTPLLQPAHPTPFYIDDILGRGPAAPTPTPTLPSPNSSFTSLVS
SYRTPVYEPTPVHPAFSHHPAAALAAAYGPGGFGGPLYPFPRTVNDYTHALLRHDPLGKPLLWN
PFLQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK
WRRLKQENPQSNKKDELDSLDTSCDQGQDLPSEQNKGASLDSSQCSPSPASPEDPESEISEDSD
QEVDIEGDKGYFNAG

hide sequence

Ensembl Acc Id:

ENSRNOP00000022384 ⟸ ENSRNOT00000022384

Protein Domains

Homeobox

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F7F7Q9-F1-model_v2	AlphaFold	F7F7Q9	1-246	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690877

Promoter ID:

EPDNEW_R1402

Type:

multiple initiation site

Name:

Hhex_1

Description:

hematopoietically expressed homeobox

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	256,101,976 - 256,102,036	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619932	AgrOrtholog
BioCyc Gene	G2FUF-55804	BioCyc
Ensembl Genes	ENSRNOG00000016595	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000022384.6	UniProtKB/TrEMBL
Gene3D-CATH	Homeodomain-like	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7366155	IMAGE-MGC_LOAD
InterPro	Homeobox	UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/TrEMBL
	Homeobox_DNA-bind_prot	UniProtKB/TrEMBL
	Homeobox_region	UniProtKB/TrEMBL
	Homeodomain-like	UniProtKB/TrEMBL
KEGG Report	rno:79237	UniProtKB/TrEMBL
MGC_CLONE	MGC:108673	IMAGE-MGC_LOAD
NCBI Gene	79237	ENTREZGENE
PANTHER	HEMATOPOIETICALLY-EXPRESSED HOMEOBOX PROTEIN HHEX	UniProtKB/TrEMBL
	HOMEOBOX PROTEIN HHEX	UniProtKB/TrEMBL
Pfam	Homeobox	UniProtKB/TrEMBL
PharmGKB	HHEX	RGD
PhenoGen	Hhex	PhenoGen
PRINTS	HOMEOBOX	UniProtKB/TrEMBL
PROSITE	HOMEOBOX_1	UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000016595	RatGTEx
SMART	HOX	UniProtKB/TrEMBL
Superfamily-SCOP	Homeodomain_like	UniProtKB/TrEMBL
UniProt	A0A9K3Y8F2	ENTREZGENE, UniProtKB/TrEMBL
	A6I169_RAT	UniProtKB/TrEMBL
	F7F7Q9	ENTREZGENE
	Q9WV22	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F7F7Q9	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Hhex	hematopoietically expressed homeobox			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Hhex	hematopoietically expressed homeobox			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expression is induced by retinoic acid	625370

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)