Gene: Htr5a (5-hydroxytryptamine receptor 5A) Rattus norvegicus
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Symbol: Htr5a
Name: 5-hydroxytryptamine receptor 5A
Description: Exhibits G protein-coupled serotonin receptor activity; involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger, hippocampus development, and response to estradiol; localizes to several cellular components, including the cytoplasm, dendrite, and integral component of postsynaptic specialization membrane; orthologous to human HTR5A (5-hydroxytryptamine receptor 5A); PARTICIPATES IN calcium/calcium-mediated signaling pathway; INTERACTS WITH (S)-amphetamine; 17alpha-ethynylestradiol; alendronic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 5-HT-5A; 5-HT5A; 5-hydroxytryptamine (serotonin) receptor 5A; 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled; 5HT5A; MR22; REC17; serotonin receptor 5A
Orthologs:
Homo sapiens (human) : HTR5A (5-hydroxytryptamine receptor 5A)  HGNC  Alliance
Mus musculus (house mouse) : Htr5a (5-hydroxytryptamine (serotonin) receptor 5A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Htr5a (5-hydroxytryptamine receptor 5A)
Pan paniscus (bonobo/pygmy chimpanzee) : HTR5A (5-hydroxytryptamine receptor 5A)
Canis lupus familiaris (dog) : HTR5A (5-hydroxytryptamine receptor 5A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Htr5a (5-hydroxytryptamine receptor 5A)
Sus scrofa (pig) : HTR5A (5-hydroxytryptamine receptor 5A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04199,916 - 209,599 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04192,554 - 202,795 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.442,707,261 - 2,716,944 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.142,707,260 - 2,716,944 (-)NCBI
Celera42,826,290 - 2,835,975 (+)NCBICelera
Cytogenetic Map4q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Htr5a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2851
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.