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Gene: Zic3 (Zic family member 3) Rattus norvegicus
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Symbol: Zic3
Name: Zic family member 3
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in several processes, including determination of left/right symmetry; lung development; and positive regulation of transcription by RNA polymerase II. Predicted to localize to the cytoplasm and nucleoplasm. Human ortholog(s) of this gene implicated in situs inversus and visceral heterotaxy. Orthologous to human ZIC3 (Zic family member 3); INTERACTS WITH 3,7-dihydropurine-6-thione; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC367944; RGD1561261; similar to Zinc finger protein ZIC 3 (Zinc finger protein of the cerebellum 3); Zic family member 3 (odd-paired homolog, Drosophila); zinc finger protein of the cerebellum 3; zinc finger protein ZIC 3
Orthologs:
Homo sapiens (human) : ZIC3 (Zic family member 3)  HGNC  Alliance
Mus musculus (house mouse) : Zic3 (zinc finger protein of the cerebellum 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zic3 (Zic family member 3)
Pan paniscus (bonobo/pygmy chimpanzee) : ZIC3 (Zic family member 3)
Canis lupus familiaris (dog) : ZIC3 (Zic family member 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zic3 (Zic family member 3)
Sus scrofa (pig) : ZIC3 (Zic family member 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X140,875,191 - 140,888,344 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX140,878,216 - 140,888,795 (+)Ensembl
Rnor_5.0X140,918,894 - 140,931,861 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X143,128,118 - 143,139,155 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX132,262,545 - 132,272,607 (+)NCBICelera
Cytogenetic MapXq36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zic3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561261
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.