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Gene: Sema4c (semaphorin 4C) Rattus norvegicus
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Symbol: Sema4c
Name: semaphorin 4C
Description: Predicted to have chemorepellent activity and semaphorin receptor binding activity. Predicted to be involved in several processes, including nervous system development; neural crest cell migration; and positive regulation of stress-activated MAPK cascade. Predicted to localize to several cellular components, including the extracellular space; postsynaptic density; and synaptic vesicle membrane. Orthologous to human SEMA4C (semaphorin 4C); INTERACTS WITH bisphenol A; cefaloridine; cocaine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC301346; RGD1562837; sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C; semaphorin-4C; similar to Semaphorin 4C precursor (Semaphorin I); similar to Semaphorin 4C precursor (Semaphorin I) (Sema I) (Semaphorin C-like 1) (M-Sema F)
Orthologs:
Homo sapiens (human) : SEMA4C (semaphorin 4C)  HGNC  Alliance
Mus musculus (house mouse) : Sema4c (sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema4c (semaphorin 4C)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA4C (semaphorin 4C)
Canis lupus familiaris (dog) : SEMA4C (semaphorin 4C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sema4c (semaphorin 4C)
Sus scrofa (pig) : SEMA4C (semaphorin 4C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0943,129,413 - 43,140,442 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl943,129,415 - 43,139,870 (-)Ensembl
Rnor_5.0942,783,319 - 42,793,776 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4935,492,647 - 35,503,102 (-)NCBIRGSC3.4rn4RGSC3.4
Celera936,558,044 - 36,568,492 (-)NCBICelera
Cytogenetic Map9q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sema4c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562837
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.