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Gene: Ptbp2 (polypyrimidine tract binding protein 2) Rattus norvegicus
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Symbol: Ptbp2
Name: polypyrimidine tract binding protein 2
Description: Predicted to have mRNA binding activity. Involved in cerebellum development; negative regulation of RNA splicing; and spinal cord development. Localizes to the growth cone; neuronal cell body; and nucleus. Orthologous to human PTBP2 (polypyrimidine tract binding protein 2); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 17alpha-ethynylestradiol; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC95244; neural polypyrimidine tract-binding protein; nPTB; polypyrimidine tract-binding protein 2; PTB-like protein; Ptb2; PTBLP; PTBLP-L; PTBLP-S
Orthologs:
Homo sapiens (human) : PTBP2 (polypyrimidine tract binding protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Ptbp2 (polypyrimidine tract binding protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptbp2 (polypyrimidine tract binding protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PTBP2 (polypyrimidine tract binding protein 2)
Canis lupus familiaris (dog) : PTBP2 (polypyrimidine tract binding protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptbp2 (polypyrimidine tract binding protein 2)
Sus scrofa (pig) : PTBP2 (polypyrimidine tract binding protein 2)
Chlorocebus sabaeus (green monkey) : PTBP2 (polypyrimidine tract binding protein 2)
Heterocephalus glaber (naked mole-rat) : Ptbp2 (polypyrimidine tract binding protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02223,261,444 - 223,323,075 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2223,262,852 - 223,322,585 (-)Ensembl
Rnor_5.02241,306,857 - 241,368,189 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42216,188,745 - 216,249,176 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2200,269,277 - 200,328,535 (-)NCBICelera
Cytogenetic Map2q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ptbp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359267
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.