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Gene: Efhc1 (EF-hand domain containing 1) Rattus norvegicus
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Symbol: Efhc1
Name: EF-hand domain containing 1
Description: Predicted to have alpha-tubulin binding activity and protein C-terminus binding activity. Predicted to be involved in several processes, including cerebral cortex cell migration; cilium-dependent cell motility; and mitotic spindle organization. Predicted to localize to the cytoskeleton and neuronal cell body. Human ortholog(s) of this gene implicated in childhood absence epilepsy and juvenile myoclonic epilepsy. Orthologous to human EFHC1 (EF-hand domain containing 1); INTERACTS WITH (RS)-amphetamine; 6-propyl-2-thiouracil; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: EF-hand domain (C-terminal) containing 1; EF-hand domain-containing protein 1; LOC301295; similar to EF-hand domain-containing protein 1
Orthologs:
Homo sapiens (human) : EFHC1 (EF-hand domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Efhc1 (EF-hand domain (C-terminal) containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Efhc1 (EF-hand domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : EFHC1 (EF-hand domain containing 1)
Canis lupus familiaris (dog) : EFHC1 (EF-hand domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efhc1 (EF-hand domain containing 1)
Sus scrofa (pig) : EFHC1 (EF-hand domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0927,068,505 - 27,107,713 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0925,924,344 - 25,962,902 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4919,695,815 - 19,750,261 (+)NCBIRGSC3.4rn4RGSC3.4
Celera920,938,313 - 20,989,329 (+)NCBICelera
Cytogenetic Map9q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Efhc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1587365
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.