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Gene: Rbfox2 (RNA binding fox-1 homolog 2) Rattus norvegicus
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Symbol: Rbfox2
Name: RNA binding fox-1 homolog 2
Description: Predicted to have mRNA binding activity; transcription corepressor activity; and transcription factor binding activity. Predicted to be involved in several processes, including intracellular estrogen receptor signaling pathway; nervous system development; and regulation of RNA metabolic process. Predicted to localize to the cytosol and nucleoplasm. Orthologous to human RBFOX2 (RNA binding fox-1 homolog 2); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; atrazine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: fox-1 homolog B; LOC362950; MGC156775; Rbm9; RNA binding motif protein 9; RNA binding protein fox-1 homolog 2; RNA binding protein, fox-1 homolog (C. elegans) 2; RNA binding protein, fox-1 homolog 2; RNA-binding motif protein 9; RNA-binding protein 9; RNA-binding protein FOX2
Orthologs:
Homo sapiens (human) : RBFOX2 (RNA binding fox-1 homolog 2)  HGNC  Alliance
Mus musculus (house mouse) : Rbfox2 (RNA binding protein, fox-1 homolog (C. elegans) 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rbfox2 (RNA binding fox-1 homolog 2)
Pan paniscus (bonobo/pygmy chimpanzee) : RBFOX2 (RNA binding fox-1 homolog 2)
Canis lupus familiaris (dog) : RBFOX2 (RNA binding fox-1 homolog 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rbfox2 (RNA binding fox-1 homolog 2)
Sus scrofa (pig) : RBFOX2 (RNA binding fox-1 homolog 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07118,157,093 - 118,396,733 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07118,149,473 - 118,388,515 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47115,143,721 - 115,384,534 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17115,176,300 - 115,250,419 (-)NCBI
Celera7105,163,071 - 105,401,893 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rbfox2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311838
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.